Miyakogusa Predicted Gene
- Lj4g3v3112900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3112900.1 tr|B3H4G3|B3H4G3_ARATH Protein TIFY 6A
OS=Arabidopsis thaliana GN=JAZ4 PE=4 SV=1,34.58,9e-19,TIFY,Tify; no
description,Tify; seg,NULL; tify,Tify; CCT_2,CO/COL/TOC1, conserved
site,CUFF.52351.1
(328 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 122 3e-28
AT3G17860.3 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 103 2e-22
AT3G17860.2 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 103 2e-22
AT1G48500.1 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 100 1e-21
AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT m... 98 8e-21
AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif f... 93 2e-19
AT1G48500.2 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 91 8e-19
AT1G48500.3 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 73 3e-13
>AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6119968-6122691 FORWARD LENGTH=352
Length = 352
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 160/349 (45%), Gaps = 37/349 (10%)
Query: 1 MERDFMGLSSKEPLSVIKEEIKNDGWIDSGFTKGSVAQWPFTNKVSAFP-HVMSFKVSQD 59
MERDF+GL SK +KEE ++ DS +G W F+NKVSA +SF+ +Q+
Sbjct: 1 MERDFLGLGSKNSPITVKEET-SESSRDSAPNRG--MNWSFSNKVSASSSQFLSFRPTQE 57
Query: 60 ERTKRMVSEPQKSLNLNEQGGIHFS----------LAPHPVQHDGKMFSVSNQ-----AI 104
+R ++ + +L G S AP+ +MF SNQ A+
Sbjct: 58 DRHRK-----SGNYHLPHSGSFMPSSVADVYDSTRKAPYSSVQGVRMFPNSNQHEETNAV 112
Query: 105 SAPLGNPFQKNHFAAAGQN-MNGANVKLPLLGGKPVTAPHSSLPTIGAVAGMSE--SCLK 161
S + FQ +H+A G++ MN N PL+G + P S LP G++ G ++ S K
Sbjct: 113 SMSMPG-FQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSK 171
Query: 162 TSAPSAPLTIFYAGTVNVFDDISAEKAQAIMLLAAGNV----LFGASSTAQQKVQAPSSK 217
A LTIFYAG+V V+DDIS EKA+AIMLLA +F T QQ V +
Sbjct: 172 PIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRAS 231
Query: 218 LAGGDVCPPANTXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFLAAKTTGVPTAPVSIVEP 277
+ PP+ + + G + ++ P
Sbjct: 232 V-DSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNNQANG---SNINCPVP 287
Query: 278 RKAVTAATMLTSAVPQARKASLARFLEKRKERAMNAAPYN-NLKKSEEC 325
T T A+P ARKASLARFLEKRKER + +PY + K S +C
Sbjct: 288 VSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSPYCLDKKSSTDC 336
>AT3G17860.3 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6121143-6122691 FORWARD LENGTH=319
Length = 319
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 141/311 (45%), Gaps = 34/311 (10%)
Query: 39 WPFTNKVSAFP-HVMSFKVSQDERTKRMVSEPQKSLNLNEQGGIHFS----------LAP 87
W F+NKVSA +SF+ +Q++R ++ + +L G S AP
Sbjct: 3 WSFSNKVSASSSQFLSFRPTQEDRHRK-----SGNYHLPHSGSFMPSSVADVYDSTRKAP 57
Query: 88 HPVQHDGKMFSVSNQ-----AISAPLGNPFQKNHFAAAGQN-MNGANVKLPLLGGKPVTA 141
+ +MF SNQ A+S + FQ +H+A G++ MN N PL+G +
Sbjct: 58 YSSVQGVRMFPNSNQHEETNAVSMSMPG-FQSHHYAPGGRSFMNNNNNSQPLVGVPIMAP 116
Query: 142 PHSSLPTIGAVAGMSE--SCLKTSAPSAPLTIFYAGTVNVFDDISAEKAQAIMLLAAGNV 199
P S LP G++ G ++ S K A LTIFYAG+V V+DDIS EKA+AIMLLA
Sbjct: 117 PISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGS 176
Query: 200 ----LFGASSTAQQKVQAPSSKLAGGDVCPPANTXXXXXXXXXXXXXXXXXXXXXXXXXX 255
+F T QQ V + + + PP+
Sbjct: 177 SMPQVFSPPQTHQQVVHHTRASVDSSAM-PPSFMPTISYLSPEAGSSTNGLGATKATRGL 235
Query: 256 XDEFLAAKTTGVPTAPVSIVEPRKAVTAATMLTSAVPQARKASLARFLEKRKERAMNAAP 315
+ + G + ++ P T T A+P ARKASLARFLEKRKER + +P
Sbjct: 236 TSTYHNNQANG---SNINCPVPVSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSP 292
Query: 316 YN-NLKKSEEC 325
Y + K S +C
Sbjct: 293 YCLDKKSSTDC 303
>AT3G17860.2 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6121083-6122691 FORWARD LENGTH=339
Length = 339
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 141/311 (45%), Gaps = 34/311 (10%)
Query: 39 WPFTNKVSAFP-HVMSFKVSQDERTKRMVSEPQKSLNLNEQGGIHFS----------LAP 87
W F+NKVSA +SF+ +Q++R ++ + +L G S AP
Sbjct: 23 WSFSNKVSASSSQFLSFRPTQEDRHRK-----SGNYHLPHSGSFMPSSVADVYDSTRKAP 77
Query: 88 HPVQHDGKMFSVSNQ-----AISAPLGNPFQKNHFAAAGQN-MNGANVKLPLLGGKPVTA 141
+ +MF SNQ A+S + FQ +H+A G++ MN N PL+G +
Sbjct: 78 YSSVQGVRMFPNSNQHEETNAVSMSMPG-FQSHHYAPGGRSFMNNNNNSQPLVGVPIMAP 136
Query: 142 PHSSLPTIGAVAGMSE--SCLKTSAPSAPLTIFYAGTVNVFDDISAEKAQAIMLLAAGNV 199
P S LP G++ G ++ S K A LTIFYAG+V V+DDIS EKA+AIMLLA
Sbjct: 137 PISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGS 196
Query: 200 ----LFGASSTAQQKVQAPSSKLAGGDVCPPANTXXXXXXXXXXXXXXXXXXXXXXXXXX 255
+F T QQ V + + + PP+
Sbjct: 197 SMPQVFSPPQTHQQVVHHTRASVDSSAM-PPSFMPTISYLSPEAGSSTNGLGATKATRGL 255
Query: 256 XDEFLAAKTTGVPTAPVSIVEPRKAVTAATMLTSAVPQARKASLARFLEKRKERAMNAAP 315
+ + G + ++ P T T A+P ARKASLARFLEKRKER + +P
Sbjct: 256 TSTYHNNQANG---SNINCPVPVSCSTNVMAPTVALPLARKASLARFLEKRKERVTSVSP 312
Query: 316 YN-NLKKSEEC 325
Y + K S +C
Sbjct: 313 YCLDKKSSTDC 323
>AT1G48500.1 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17931658-17934433 FORWARD LENGTH=310
Length = 310
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 147/342 (42%), Gaps = 66/342 (19%)
Query: 1 MERDFMGLSSKEPLSVIKEEIKNDGWIDSGFTKGSVAQWPFTNKVSAFPHVMSFKVSQDE 60
MERDF+GL SK +KEE D G + W F++KV + P +SF SQ E
Sbjct: 1 MERDFLGLGSKLSPITVKEETNEDSAPSRG-----MMDWSFSSKVGSGPQFLSFGTSQQE 55
Query: 61 -RTKRMVSEPQKSLNLNEQGGIHFSLAPHPVQHDGKMFSVSNQ----AISAPLGNPFQKN 115
R + S +++ +FS +Q D ++F S+Q I+ + P N
Sbjct: 56 TRVNTVNDHLLSSAAMDQNQRTYFS----SLQED-RVFPGSSQQDQTTITVSMSEPNYIN 110
Query: 116 HFAAAGQNMNGANVKLPLLGGKPVTAPHSSL---PTIGAVAGMSESCLKTSAPSAP-LTI 171
F + LGG P+ AP S+ PT + +S P P LTI
Sbjct: 111 SF-----------INHQHLGGSPIMAPPVSVFPAPT---------TIRSSSKPLPPQLTI 150
Query: 172 FYAGTVNVFDDISAEKAQAIMLLAAGNVLFGASSTAQQKVQAPSSKLAGGDVCPPANTXX 231
FYAG+V V+ DI+ EKAQAIMLL AGN P +K V P
Sbjct: 151 FYAGSVLVYQDIAPEKAQAIMLL-AGN--------------GPHAK----PVSQPKPQKL 191
Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXDEFLAAKTTGV----PT-APVSIVEPRKAVTAATM 286
E ++ + GV PT S+ R TAA
Sbjct: 192 VHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAFS 251
Query: 287 L--TSAVPQARKASLARFLEKRKERAMNAAPYN-NLKKSEEC 325
+ T +PQ RKASLARFLEKRKER +N +PY + K S +C
Sbjct: 252 MAPTVGLPQTRKASLARFLEKRKERVINVSPYYVDNKSSIDC 293
>AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT
motif family protein | chr1:26654951-26656804 FORWARD
LENGTH=267
Length = 267
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 138/322 (42%), Gaps = 78/322 (24%)
Query: 1 MERDFMGLSSKEPLSV-IKEEIKNDGWIDSGFTKGSVAQWPFTNKVSAFPHVMSFKVSQD 59
MERDF+GLS K+ LS +K E+ +D + G + + +W +KV A SF S D
Sbjct: 1 MERDFLGLSDKQYLSNNVKHEVNDDAVEERGLSTKAAREWG-KSKVFA---TSSFMPSSD 56
Query: 60 ERTKRMVSEPQKSLNLNEQGGIHFSLAPHPVQHDGKMFSVSNQAISAPLGNPFQKNHFAA 119
+ + K F + Q S N F++ F
Sbjct: 57 FQ-------------------------------EAKAFPGAYQWGSVSAANVFRRCQFGG 85
Query: 120 AGQNMNGANVKLPLLGGKPVTAP-HSSLPTIGAVAGMSESCLKTSAPSAPLTIFYAGTVN 178
A QN PLL G V P H SL + VA +S S LTIFY GT++
Sbjct: 86 AFQNAT------PLLLGGSVPLPTHPSL--VPRVA--------SSGSSPQLTIFYGGTIS 129
Query: 179 VFDDISAEKAQAIMLLAAGNVLFGASSTAQQKVQAPSSKLAGGDVCPPANTXXXXXXXXX 238
VF+DIS +KAQAIML AGN L G T K + ++ G +
Sbjct: 130 VFNDISPDKAQAIML-CAGNGLKG--ETGDSKPVREAERMYGKQI--------------- 171
Query: 239 XXXXXXXXXXXXXXXXXXDEFLAAKTTGVP-TAPVSIVEPRKAVTAATMLTSAVPQARKA 297
D F + T V T +S++E A A + +VPQARKA
Sbjct: 172 ----HNTAATSSSSATHTDNFSRCRDTPVAATNAMSMIESFNA--APRNMIPSVPQARKA 225
Query: 298 SLARFLEKRKERAMNAAPYNNL 319
SLARFLEKRKER M+A PY +
Sbjct: 226 SLARFLEKRKERLMSAMPYKKM 247
>AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif
family protein | chr1:26654951-26656804 FORWARD
LENGTH=243
Length = 243
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 131/321 (40%), Gaps = 100/321 (31%)
Query: 1 MERDFMGLSSKEPLSV-IKEEIKNDGWIDSGFTKGSVAQWPFTNKVSAFPHVMSFKVSQD 59
MERDF+GLS K+ LS +K E+ +D + G + + +W +KV A M
Sbjct: 1 MERDFLGLSDKQYLSNNVKHEVNDDAVEERGLSTKAAREWG-KSKVFATSSFM------- 52
Query: 60 ERTKRMVSEPQKSLNLNEQGGIHFSLAPHPVQHDGKMFSVSNQAISAPLGNPFQKNHFAA 119
P + K F + Q S N F++ F
Sbjct: 53 ---------------------------PSSDFQEAKAFPGAYQWGSVSAANVFRRCQFGG 85
Query: 120 AGQNMNGANVKLPLLGGKPVTAP-HSSLPTIGAVAGMSESCLKTSAPSAPLTIFYAGTVN 178
A QN PLL G V P H SL + VA +S S LTIFY GT++
Sbjct: 86 AFQNAT------PLLLGGSVPLPTHPSL--VPRVA--------SSGSSPQLTIFYGGTIS 129
Query: 179 VFDDISAEKAQAIMLLAAGNVLFGASSTAQQKVQAPSSKLAGGDVCPPANTXXXXXXXXX 238
VF+DIS +KAQAIM L AGN L G + ++ +A
Sbjct: 130 VFNDISPDKAQAIM-LCAGNGLKGETGDSKPVREA------------------------- 163
Query: 239 XXXXXXXXXXXXXXXXXXDEFLAAKTTGVPTAPVSIVEPRKAVTAATMLTSAVPQARKAS 298
E + T T +S++E A A + +VPQARKAS
Sbjct: 164 -------------------ERMCRDTPVAATNAMSMIESFNA--APRNMIPSVPQARKAS 202
Query: 299 LARFLEKRKERAMNAAPYNNL 319
LARFLEKRKER M+A PY +
Sbjct: 203 LARFLEKRKERLMSAMPYKKM 223
>AT1G48500.2 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17931658-17934255 FORWARD LENGTH=277
Length = 277
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 137/325 (42%), Gaps = 65/325 (20%)
Query: 1 MERDFMGLSSKEPLSVIKEEIKNDGWIDSGFTKGSVAQWPFTNKVSAFPHVMSFKVSQDE 60
MERDF+GL SK +KEE D G + W F++KV + P +SF SQ E
Sbjct: 1 MERDFLGLGSKLSPITVKEETNEDSAPSRG-----MMDWSFSSKVGSGPQFLSFGTSQQE 55
Query: 61 -RTKRMVSEPQKSLNLNEQGGIHFSLAPHPVQHDGKMFSVSNQ----AISAPLGNPFQKN 115
R + S +++ +FS +Q D ++F S+Q I+ + P N
Sbjct: 56 TRVNTVNDHLLSSAAMDQNQRTYFS----SLQED-RVFPGSSQQDQTTITVSMSEPNYIN 110
Query: 116 HFAAAGQNMNGANVKLPLLGGKPVTAPHSSL---PTIGAVAGMSESCLKTSAPSAP-LTI 171
F + LGG P+ AP S+ PT + +S P P LTI
Sbjct: 111 SF-----------INHQHLGGSPIMAPPVSVFPAPT---------TIRSSSKPLPPQLTI 150
Query: 172 FYAGTVNVFDDISAEKAQAIMLLAAGNVLFGASSTAQQKVQAPSSKLAGGDVCPPANTXX 231
FYAG+V V+ DI+ EKAQAIMLL AGN P +K V P
Sbjct: 151 FYAGSVLVYQDIAPEKAQAIMLL-AGN--------------GPHAK----PVSQPKPQKL 191
Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXDEFLAAKTTGV----PT-APVSIVEPRKAVTAATM 286
E ++ + GV PT S+ R TAA
Sbjct: 192 VHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAFS 251
Query: 287 L--TSAVPQARKASLARFLEKRKER 309
+ T +PQ RKASLARFLEKRKER
Sbjct: 252 MAPTVGLPQTRKASLARFLEKRKER 276
>AT1G48500.3 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17932994-17934255 FORWARD LENGTH=247
Length = 247
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 120/287 (41%), Gaps = 60/287 (20%)
Query: 39 WPFTNKVSAFPHVMSFKVSQDE-RTKRMVSEPQKSLNLNEQGGIHFSLAPHPVQHDGKMF 97
W F++KV + P +SF SQ E R + S +++ +FS +Q D ++F
Sbjct: 4 WSFSSKVGSGPQFLSFGTSQQETRVNTVNDHLLSSAAMDQNQRTYFS----SLQED-RVF 58
Query: 98 SVSNQ----AISAPLGNPFQKNHFAAAGQNMNGANVKLPLLGGKPVTAPHSSL---PTIG 150
S+Q I+ + P N F + LGG P+ AP S+ PT
Sbjct: 59 PGSSQQDQTTITVSMSEPNYINSF-----------INHQHLGGSPIMAPPVSVFPAPT-- 105
Query: 151 AVAGMSESCLKTSAPSAP-LTIFYAGTVNVFDDISAEKAQAIMLLAAGNVLFGASSTAQQ 209
+ +S P P LTIFYAG+V V+ DI+ EKAQAIMLL AGN
Sbjct: 106 -------TIRSSSKPLPPQLTIFYAGSVLVYQDIAPEKAQAIMLL-AGN----------- 146
Query: 210 KVQAPSSKLAGGDVCPPANTXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFLAAKTTGV-- 267
P +K V P E ++ + GV
Sbjct: 147 ---GPHAK----PVSQPKPQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTG 199
Query: 268 --PT-APVSIVEPRKAVTAATML--TSAVPQARKASLARFLEKRKER 309
PT S+ R TAA + T +PQ RKASLARFLEKRKER
Sbjct: 200 LGPTKTKASLASTRNNQTAAFSMAPTVGLPQTRKASLARFLEKRKER 246