Miyakogusa Predicted Gene

Lj4g3v3109640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3109640.1 Non Chatacterized Hit- tr|I1K5N2|I1K5N2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28552 PE,84.96,0,no
description,Nucleic acid-binding, OB-fold; no description,NULL; no
description,GAD domain; TRNASY,CUFF.52321.1
         (652 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33760.1 | Symbols:  | tRNA synthetase class II (D, K and N) ...   986   0.0  
AT3G13490.1 | Symbols: OVA5, ATKRS-2 | Lysyl-tRNA synthetase, cl...    71   2e-12
AT3G11710.1 | Symbols: ATKRS-1 | lysyl-tRNA synthetase 1 | chr3:...    63   5e-10
AT4G26870.1 | Symbols:  | Class II aminoacyl-tRNA and biotin syn...    61   3e-09

>AT4G33760.1 | Symbols:  | tRNA synthetase class II (D, K and N)
           family protein | chr4:16189285-16193260 REVERSE
           LENGTH=664
          Length = 664

 Score =  986 bits (2549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/620 (75%), Positives = 536/620 (86%), Gaps = 3/620 (0%)

Query: 32  TTRTFSS---VSASIQPSPTSAKPFNESLQWVSRTSYCGELSFNHVGKQVRLCGWVALHR 88
           T RTFSS    +AS              L+WVSRT  CGELS N VGK+V LCGWVALHR
Sbjct: 42  TRRTFSSSPVAAASGDVVVKPVPSPPSVLRWVSRTELCGELSVNDVGKRVHLCGWVALHR 101

Query: 89  VHGGLTFLNLRDHTGIVQVTTLPDEFPDAHSAINDLRLEYVVAIEGVVRSRPSDSVNKKM 148
           VHGGLTFLNLRDHTGIVQV TLPDEFP+AH  IND+RLEYVV +EG VRSRP++SVNKKM
Sbjct: 102 VHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLINDMRLEYVVLVEGTVRSRPNESVNKKM 161

Query: 149 KTGFIEVAANTVLVLNSVNSKLPFLVTTSDDAKESPKEEIXXXXXXXXXXXXEMQSYILL 208
           KTGF+EV A  V +LN V +KLPFLVTT+D+ K+  KEEI            +M++ I+L
Sbjct: 162 KTGFVEVVAEHVEILNPVRTKLPFLVTTADENKDLIKEEIRLRFRCLDLRRQQMKNNIVL 221

Query: 209 RHEVVKLIRRYLEDMHGFVEIETPILSRSTPEGARDYLVPSRIQPGTFYALPQSPQLFKQ 268
           RH VVKLIRRYLED HGF+EIETPILSRSTPEGARDYLVPSRIQ GTFYALPQSPQLFKQ
Sbjct: 222 RHNVVKLIRRYLEDRHGFIEIETPILSRSTPEGARDYLVPSRIQSGTFYALPQSPQLFKQ 281

Query: 269 MLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTPLEDMLTLNEELMRKVFREV 328
           MLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDME+AF P+EDML LNE+L+RKVF E+
Sbjct: 282 MLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMEMAFMPMEDMLKLNEDLIRKVFSEI 341

Query: 329 KGVELPNPFPRLTYAEAMNRYGSDRPDTRFELELKDVSDIFSGSSFKVFSDTLESGGVIK 388
           KG++LP+PFPRLTYA+AM+RYGSDRPDTRF+LELKDVS++F+ SSF+VF++ LESGG+IK
Sbjct: 342 KGIQLPDPFPRLTYADAMDRYGSDRPDTRFDLELKDVSNVFTESSFRVFTEALESGGIIK 401

Query: 389 VICVPSGAKTYSNSALKKGDIYNEAIKSGAKGLPFLKILENGDIEGIAALVSSMDPTTRK 448
           V+CVP GAK YSNSALKKGDIYNEA+KSGAKGLPFLK+L+NG+IEGIAALVSS+D   + 
Sbjct: 402 VLCVPLGAKKYSNSALKKGDIYNEAMKSGAKGLPFLKVLDNGEIEGIAALVSSLDSAGKI 461

Query: 449 DFIERCSAGPSDLILFAVGHQASVNKTLDRLRVYVAHKLGLIDHGRHSILWITDFPMFEW 508
           +F+++C A P DLILF VG   SVNKTLDRLR++VAH + LIDH +HSILW+TDFPMFEW
Sbjct: 462 NFVKQCGAAPGDLILFGVGPVTSVNKTLDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEW 521

Query: 509 NDLEQRFEALHHPFTAPNPEDMNDLASARALAYDMVYNGVEIGGGSLRIHKRGIQQKVLE 568
           N+ EQR EALHHPFTAP PEDM+DL SARALAYDMVYNGVEIGGGSLRI+KR +Q+KVLE
Sbjct: 522 NEPEQRLEALHHPFTAPKPEDMDDLPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLE 581

Query: 569 IVGISMEQAEAKFGYLLDALDMGAPPHGGIAYGVDRLVMLLAGVHSIRDVIAFPKTTTAQ 628
           I+GIS E+AE+KFGYLL+ALDMGAPPHGGIAYG+DR+VM+L G  SIRDVIAFPKTTTAQ
Sbjct: 582 IIGISPEEAESKFGYLLEALDMGAPPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQ 641

Query: 629 CALTRSPSEVDPQQLKDLSI 648
           CALTR+PSEVDP+QL+DLSI
Sbjct: 642 CALTRTPSEVDPKQLQDLSI 661


>AT3G13490.1 | Symbols: OVA5, ATKRS-2 | Lysyl-tRNA synthetase, class
           II | chr3:4395984-4399302 REVERSE LENGTH=602
          Length = 602

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 14/274 (5%)

Query: 57  LQWVSRTSYCGELSFNHVGKQVRLCGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEFPD 116
           LQ + +    GE S N +   V + G V   R  G L FL LRD +G +Q+    +   D
Sbjct: 116 LQEIYKHLANGEESDNEI-DCVSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLSD 174

Query: 117 AHSAINDLRLEYVVAIEGVVRSRPSDSVNKKMKTGFIEVAANTVLVLNSVNSKLPFLVTT 176
                   +L+  + I  ++ +  S    K+ + G + +  N+  +L      LP     
Sbjct: 175 DQFE----QLKQFIDIGDILGASGS---MKRTEKGELSICVNSFSILTKSLLPLPDKYHG 227

Query: 177 SDDAKESPKEEIXXXXXXXXXXXXEMQSYILLRHEVVKLIRRYLEDMHGFVEIETPILSR 236
             D  +  ++              E+      R ++V  IR+ +E   G++E+ETP+L  
Sbjct: 228 LTDIDKRYRQRYVDMIANP-----EVADVFRRRAKIVSEIRKTVESF-GYLEVETPVLQG 281

Query: 237 STPEGARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP 296
           +         V      G    L  + +L  + ++V GF+K Y+I R FR+E +     P
Sbjct: 282 AAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP 341

Query: 297 EFTQLDMELAFTPLEDMLTLNEELMRKVFREVKG 330
           EFT ++M  A++    M+ + E ++ +    V G
Sbjct: 342 EFTTIEMYEAYSDYHSMMDMAELIVTQCSMAVNG 375



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 27/39 (69%)

Query: 584 LLDALDMGAPPHGGIAYGVDRLVMLLAGVHSIRDVIAFP 622
            L AL+ G PP  G+  G+DRLVMLL    SIRDVIAFP
Sbjct: 558 FLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 596


>AT3G11710.1 | Symbols: ATKRS-1 | lysyl-tRNA synthetase 1 |
           chr3:3702359-3705613 REVERSE LENGTH=626
          Length = 626

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 1/130 (0%)

Query: 201 EMQSYILLRHEVVKLIRRYLEDMHGFVEIETPILSRSTPEGARDYLVPSRIQPGTFYALP 260
           E++     R +++  +RR+L D   F+E+ETP+++      A    V           + 
Sbjct: 275 EVRQIFRTRAKIISYVRRFL-DNKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMR 333

Query: 261 QSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTPLEDMLTLNEEL 320
            +P+L+ + L+V G ++ Y+I + FR+E +     PEFT  +  +AF    D++ + E +
Sbjct: 334 IAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVM 393

Query: 321 MRKVFREVKG 330
           +  + +E+ G
Sbjct: 394 LSGMVKELTG 403


>AT4G26870.1 | Symbols:  | Class II aminoacyl-tRNA and biotin
           synthetases superfamily protein | chr4:13505381-13507619
           FORWARD LENGTH=532
          Length = 532

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 16/128 (12%)

Query: 499 WITDFPMFEWNDLEQRFEALHHPF-TAPNPEDMNDLASARALAYDMVYNGVEIGGGSLRI 557
           + T+F M        R+ +   PF T P   D N   S     +D+   G EI  G+ RI
Sbjct: 415 YKTEFYML------HRYPSAVRPFYTMPYENDSNYSNS-----FDVFIRGEEIMSGAQRI 463

Query: 558 HKRGIQQKVLEIVGISMEQAEAKFGYLLDALDMGAPPHGGIAYGVDRLVMLLAGVHSIRD 617
           H   + +K     GI ++         +DA   GAPPHGG   G++R+VMLL  +++IR 
Sbjct: 464 HDPELLEKRARECGIDVK----TISTYIDAFRYGAPPHGGFGVGLERVVMLLCALNNIRK 519

Query: 618 VIAFPKTT 625
              FP+ +
Sbjct: 520 TSLFPRDS 527



 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 127/308 (41%), Gaps = 41/308 (13%)

Query: 74  VGKQVRLCGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEF-PDAHSAINDLRLEYVVAI 132
           VG +V + G +  +R+ G   F+ LR+    VQ          +    +  L  E VV +
Sbjct: 84  VGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRESVVEL 143

Query: 133 EGVVRSRPSDSVNKKMKTGFIEVAANTVLVLNSVNSKLPFLV-----------TTSDDAK 181
            GVV S P   +     T  +E+    +  L+     LP +V            +  D K
Sbjct: 144 IGVV-SHPKKPLTGT--TQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKDGK 200

Query: 182 ESPK--EEIXXXXXXXXXXXXEMQSYILLRHEVVKLIRRYLEDMHGFVEIETP-ILSRST 238
           ++ +  ++               Q+   ++ +V    R YL+   GF+EI TP +++ S+
Sbjct: 201 QAARVLQDTRLNNRVLDIRTPANQAIFRIQCQVQIAFREYLQS-KGFLEIHTPKLIAGSS 259

Query: 239 PEGARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQ-PE 297
             G+  + +  + QP     L QSPQL KQM +     + +++   FR ED    R   E
Sbjct: 260 EGGSAVFRLDYKGQPA---CLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCE 316

Query: 298 FTQLDMELAF-TPLEDMLTLNEELMRKVF--------REVKGVELPNPFP---------R 339
           F  LD+E+       +++ L  EL   +F        +E++ V    PF          R
Sbjct: 317 FVGLDVEMEIRMHYSEIMDLVGELFPFIFTKIEERCPKELESVRKQYPFQSLKFLPQTLR 376

Query: 340 LTYAEAMN 347
           LT+AE + 
Sbjct: 377 LTFAEGIQ 384