Miyakogusa Predicted Gene

Lj4g3v3099300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3099300.1 Non Chatacterized Hit- tr|F6HPR6|F6HPR6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.31,4e-18,DUF1666,Protein of unknown function DUF1666; seg,NULL;
STRUCTURAL CONSTITUENT OF RIBOSOME,NULL; 60S ,CUFF.52264.1
         (556 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73850.1 | Symbols:  | Protein of unknown function (DUF1666) ...   373   e-103
AT3G20260.1 | Symbols:  | Protein of unknown function (DUF1666) ...   155   6e-38
AT1G69610.1 | Symbols:  | Protein of unknown function (DUF1666) ...    90   5e-18
AT5G39785.1 | Symbols:  | Protein of unknown function (DUF1666) ...    85   1e-16
AT5G39785.2 | Symbols:  | Protein of unknown function (DUF1666) ...    83   4e-16

>AT1G73850.1 | Symbols:  | Protein of unknown function (DUF1666) |
           chr1:27767375-27770386 FORWARD LENGTH=635
          Length = 635

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/339 (59%), Positives = 242/339 (71%), Gaps = 23/339 (6%)

Query: 236 EDAFSTSSRRSCPKWESYTLFQKYDEEKAFLNRTSSQKLHESDSIRS----PRSMSERIA 291
           +D FSTSSRRSCPKWESYT+FQKYDEE  FL R S+QKLHE++S++S    PRS+SERI 
Sbjct: 298 DDPFSTSSRRSCPKWESYTVFQKYDEEMTFLTRISAQKLHEAESLKSIMVEPRSISERIV 357

Query: 292 NKLSTINKKVADVGH--------NPYRELEAAYVAQICLTWEALSWNYKNCRSKHSSLRD 343
           +KLS+   K     +        NPY ELE+AYVAQICLTWEALSWNYKN   K S+ + 
Sbjct: 358 HKLSSNGHKKKQKQYPGSNGSRPNPYVELESAYVAQICLTWEALSWNYKNFERKRSTTQR 417

Query: 344 L--DTGCPAIIAXXXXXXXXXXXRYIENEPYEHGRRPEIFARMRLLAPNLLLVPECQDSE 401
              D GCPA IA           RY+ENEPYEHGRRPEI+ARMR LAP LLLVPE QD E
Sbjct: 418 SFNDVGCPAGIADQFRTFHILLQRYVENEPYEHGRRPEIYARMRTLAPKLLLVPEYQDYE 477

Query: 402 DDEKDG-----DFQCKISSASFLMIMEEGIRTFMNFLKTDKETPCH-ILAAYFMRNLRGT 455
           ++E+        F+ +ISSASFLMIMEE IRTFMNFL+ DKE PC  I+ A+F R+ RG 
Sbjct: 478 EEEEKEDENEEGFRSRISSASFLMIMEECIRTFMNFLQADKEKPCQKIIKAFFGRSKRGP 537

Query: 456 VDPTLLRLMXXXXXXXXXXXXDLSHAGRSLRKRKLNVEEKMEILMALIDLKVVSRVLRMN 515
           VDPTL+ LM            ++   G+ +RK+K+++EE+MEILM LIDLKVVSRVLRMN
Sbjct: 538 VDPTLVHLMKKVNTKKKTKLKEMRRGGKYMRKKKMSIEEEMEILMGLIDLKVVSRVLRMN 597

Query: 516 ELSEEQLHWCENKMSKVRITEGR--LQRDYSTPLFFPSH 552
           E++EE LHWCE KMSKV+I +G   LQRD STPLFFP H
Sbjct: 598 EMNEENLHWCEEKMSKVKIIQGGKVLQRD-STPLFFPPH 635


>AT3G20260.1 | Symbols:  | Protein of unknown function (DUF1666) |
           chr3:7064190-7065751 REVERSE LENGTH=437
          Length = 437

 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 163/322 (50%), Gaps = 23/322 (7%)

Query: 250 WESY-TLFQKYDEEKAFLNRTSSQKLHESD-------SIRSPRSMSERIANKLSTINKKV 301
           W  +  +++KY E   F +R SSQ+L E+        S  SPRS S+++++    ++ K 
Sbjct: 117 WGGFDAVYEKYCERMLFFDRLSSQQLKETGIGIAPSPSTPSPRSASKKLSSPFRCLSLKK 176

Query: 302 ADVGH------------NPYRELEAAYVAQICLTWEALSWNYKNCRSKHSSLRDLDTGCP 349
            DV              +PY++LE AYVAQ+CLTWEAL   Y       S   +  T C 
Sbjct: 177 FDVPEEDIEHLQPTEVDDPYQDLETAYVAQLCLTWEALHCQYTQLSHLISCQPETPT-CY 235

Query: 350 AIIAXXXXXXXXXXXRYIENEPYEHGRRPEIFARMRLLAPNLLLVPECQDSEDDEKDGDF 409
              A           RYIENEP+E G R E++AR R   P LL  P+ Q S+  E + D 
Sbjct: 236 NHTAQLFQQFLVLLQRYIENEPFEQGSRSELYARARNAMPKLLQAPKIQGSDKKEMEKDT 295

Query: 410 QCKISSASFLMIMEEGIRTFMNFLKTDKETPCHILAAYFMRNLRGTVDPTLLRLMXXXXX 469
              + +   + ++E  I TF  FLK DK+ P   +  +   N       T L L+     
Sbjct: 296 GFMVLADDLIKVIESSILTFNVFLKMDKKKPNGGIHLFGNHNNNHVNSTTPLLLVQSSID 355

Query: 470 XXXXXXXDLSHAGRSLRKRKL-NVEEKMEILMALIDLKVVSRVLRMNELSEEQLHWCENK 528
                  +LS   + LRK+      E +++L A ID+K+ +RVLRM+++S+EQL WCE K
Sbjct: 356 KKRVKAKELSKKTKGLRKKSWPQTWEGVQLLFAAIDIKLATRVLRMSKISKEQLLWCEEK 415

Query: 529 MSKVRITEGRLQRDYSTPLFFP 550
           M K+  + G+LQR + +P+ FP
Sbjct: 416 MKKLNFSAGKLQR-HPSPILFP 436


>AT1G69610.1 | Symbols:  | Protein of unknown function (DUF1666) |
           chr1:26186954-26189349 FORWARD LENGTH=636
          Length = 636

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 18/241 (7%)

Query: 310 RELEAAYVAQICLTWEALSWNYKNCRSKHSSLRDLDTGCPAIIAXXXXXXXXXXXRYIEN 369
           R+ E  YV Q+CL+WE L W Y       S +    T    ++A           R++EN
Sbjct: 389 RDFETVYVGQVCLSWEMLRWQYDKVLEFDSQVT---TYQYNLVAGEFQLFQVLLQRFVEN 445

Query: 370 EPYEHGRRPEIFARMRLLAPNLLLVPECQDSEDDEK----DGDFQCKISSASFLMIMEEG 425
           EP+++  R E + + R    N L +P  +D    +K    +G+F  K  +     I+ E 
Sbjct: 446 EPFQNSSRVETYLKNRRHFQNFLQIPLVRDDRSSKKKCRYEGEFAVK--TEMLREIIRES 503

Query: 426 IRTFMNFLKTDKETPCHILAAYFMRNL--RGTVDPTLLRLMXXXXXXXXXXXXDLSHAGR 483
           +  F  FL  DK+    ++       +  + ++D  LL  +            ++  +  
Sbjct: 504 MSVFWEFLCADKDEFTSMMKVSHQTQVSPQDSLDLELLTDIRTHLQKKEKKLKEIQRSQS 563

Query: 484 SLRKR------KLNVEEKMEILMALIDLKVVSRVLRMNELSEEQLHWCENKMSKVRITEG 537
            + K+      K ++  K E+L+A I+L++VSRV+ M++L+ E+LHWC+ K+ K+    G
Sbjct: 564 CIVKKLKKNESKSSIGVKDELLIAKIELRLVSRVMYMSKLTTEKLHWCQEKLEKISFN-G 622

Query: 538 R 538
           R
Sbjct: 623 R 623


>AT5G39785.1 | Symbols:  | Protein of unknown function (DUF1666) |
           chr5:15929257-15932215 FORWARD LENGTH=606
          Length = 606

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 28/261 (10%)

Query: 311 ELEAAYVAQICLTWEALSWNYKNCRSKHSSLRDLDT-GCPAI--IAXXXXXXXXXXXRYI 367
           ELE  YV Q+CL+WE L W Y+    K   L + D  G      +A           R++
Sbjct: 349 ELENVYVGQMCLSWEILHWQYE----KAIELLESDVYGSRRYNEVAGEFQQFQVLLQRFL 404

Query: 368 ENEPYEHGRRPEIFARMRLLAPNLLLVPEC-QDSEDDEKDG---DFQ----CKISSASFL 419
           ENEP+E  R      R R +  NLL +P   +D   D+K+G   D++      I S   +
Sbjct: 405 ENEPFEEPRVQHYIKR-RCVLRNLLQIPVIREDGNKDKKNGRRRDYEENNDGVIKSDQLV 463

Query: 420 MIMEEGIRTFMNFLKTDKET-PCHILAAYFMRNL-----RGTVDPTLLRLMXXXXXXXXX 473
            IMEE IR F  F++ DK T   H   +     +       + D  +   +         
Sbjct: 464 EIMEETIRLFWRFVRCDKLTSSIHDQKSRTKSQIEPDHEEDSEDLEMFAEVKSQLQNKEK 523

Query: 474 XXXDLSHAGRSLRKR------KLNVEEKMEILMALIDLKVVSRVLRMNELSEEQLHWCEN 527
              D+  + R + +R      + + E+++    + +D+K+V+RVL M++L+ + L WC N
Sbjct: 524 RLRDVLKSERCIIRRFQKHKEEDSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHLVWCHN 583

Query: 528 KMSKVRITEGRLQRDYSTPLF 548
           K++K+     RL  D S  LF
Sbjct: 584 KLTKINFVNRRLHLDPSFCLF 604


>AT5G39785.2 | Symbols:  | Protein of unknown function (DUF1666) |
           chr5:15929257-15932215 FORWARD LENGTH=607
          Length = 607

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 37/266 (13%)

Query: 311 ELEAAYVAQICLTWEALSWNYKNCRSKHSSLRDLDT-GCPAI--IAXXXXXXXXXXXRYI 367
           ELE  YV Q+CL+WE L W Y+    K   L + D  G      +A           R++
Sbjct: 349 ELENVYVGQMCLSWEILHWQYE----KAIELLESDVYGSRRYNEVAGEFQQFQVLLQRFL 404

Query: 368 ENEPYEHGRRPEIFARMRLLAPNLLLVPEC-QDSEDDEKDG---DFQ----CKISSASFL 419
           ENEP+E  R      R R +  NLL +P   +D   D+K+G   D++      I S   +
Sbjct: 405 ENEPFEEPRVQHYIKR-RCVLRNLLQIPVIREDGNKDKKNGRRRDYEENNDGVIKSDQLV 463

Query: 420 MIMEEGIRTFMNFLKTDKET-PCHILAAYFMRNLRGTVDP----------TLLRLMXXXX 468
            IMEE IR F  F++ DK T   H   +      +  ++P              +     
Sbjct: 464 EIMEETIRLFWRFVRCDKLTSSIHDQKS----RTKSQIEPDHEEDSEDLEMFAEVKSQLQ 519

Query: 469 XXXXXXXXDLSHAGRSLRKR------KLNVEEKMEILMALIDLKVVSRVLRMNELSEEQL 522
                   D+  + R + +R      + + E+++    + +D+K+V+RVL M++L+ + L
Sbjct: 520 NVSEKRLRDVLKSERCIIRRFQKHKEEDSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHL 579

Query: 523 HWCENKMSKVRITEGRLQRDYSTPLF 548
            WC NK++K+     RL  D S  LF
Sbjct: 580 VWCHNKLTKINFVNRRLHLDPSFCLF 605