Miyakogusa Predicted Gene
- Lj4g3v3099260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3099260.1 tr|Q10E18|Q10E18_ORYSJ CCT motif family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os,41.45,2e-18,B-Box-type zinc finger,Zinc finger, B-box;
ZF_BBOX,Zinc finger, B-box; CCT,CCT domain; zf-B_box,Zinc,CUFF.52262.1
(407 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 271 6e-73
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 266 1e-71
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 228 7e-60
AT1G49130.1 | Symbols: | B-box type zinc finger protein with CC... 167 1e-41
AT1G49130.2 | Symbols: | B-box type zinc finger protein with CC... 166 2e-41
AT5G14370.1 | Symbols: | CCT motif family protein | chr5:463214... 94 1e-19
AT1G07050.1 | Symbols: | CCT motif family protein | chr1:216432... 92 9e-19
AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 | c... 89 4e-18
AT4G25990.1 | Symbols: CIL | CCT motif family protein | chr4:131... 89 5e-18
AT4G25990.2 | Symbols: CIL | CCT motif family protein | chr4:131... 79 5e-15
AT5G57180.1 | Symbols: CIA2 | chloroplast import apparatus 2 | c... 79 8e-15
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 68 1e-11
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 68 1e-11
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 67 2e-11
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 67 3e-11
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 66 4e-11
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 65 1e-10
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 61 1e-09
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 59 6e-09
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 56 4e-08
AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7... 56 4e-08
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 54 1e-07
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 54 1e-07
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 54 2e-07
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 54 2e-07
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 54 3e-07
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 53 3e-07
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 53 3e-07
AT1G04500.1 | Symbols: | CCT motif family protein | chr1:122175... 53 3e-07
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5... 52 5e-07
AT2G46670.1 | Symbols: | CCT motif family protein | chr2:191645... 52 7e-07
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co... 52 1e-06
AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 51 1e-06
AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3... 51 1e-06
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 51 1e-06
AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5... 51 1e-06
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 50 2e-06
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 50 3e-06
AT2G33350.2 | Symbols: | CCT motif family protein | chr2:141341... 50 3e-06
AT2G33350.1 | Symbols: | CCT motif family protein | chr2:141341... 50 3e-06
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 50 4e-06
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 49 6e-06
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 49 7e-06
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 49 9e-06
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 228/422 (54%), Gaps = 58/422 (13%)
Query: 8 AGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSAS-- 65
A A+G KTARACDSC++RRARW+C ADDAFLCH CD VHSAN LA RHERVRL+SAS
Sbjct: 6 ASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAG 65
Query: 66 ----SKVTTTQAWHSGFTRKARTPR--QKNHNLALQQRFKEKVLFNNTSSVVLPLVPELG 119
+ WH GFTRKARTPR +K+H + LVPE+
Sbjct: 66 KYRHASPPHQATWHQGFTRKARTPRGGKKSHTMVFHD-----------------LVPEMS 108
Query: 120 GEEQEQLVDDDESEEQLLFRVPVFEPFDGEPCIKE------------LKYNTQNDAADDE 167
E+Q + E EEQL+F VPV E C + L + + ++ DD
Sbjct: 109 TEDQ---AESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDN 165
Query: 168 EACNLESFCDFDVDLAEFAASVQSLLGNGVHE-------DLGEVFNYTKEDEIAAYVIGD 220
L D++LA+F A V++LLG G E LGE+ KE+
Sbjct: 166 AESCLNGLFPTDMELAQFTADVETLLGGGDREFHSIEELGLGEMLKIEKEEVEEE----- 220
Query: 221 AATSEKAKVKDEELDTADTNRGCHLESVLDITSNEAFEWNIDSMLQEEKEAVVASNSGE- 279
+ + +DE +T+ E T +E E + +++ E V SG
Sbjct: 221 GVVTREVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEMGVNEMSGGI 280
Query: 280 REEGTKRDMFLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLP-NCMGLSGADEEYRN 338
+EE ++ + LRL+YE VI+ W QG PWT P + + D P + MG SGA+ + N
Sbjct: 281 KEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHN 340
Query: 339 -LRG---HIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
RG H+ GD GREARV RYREKRRTRLF+KKIRYEVRKLNAEKRPR+KGRFVKR+
Sbjct: 341 HFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400
Query: 395 CL 396
+
Sbjct: 401 SI 402
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/436 (41%), Positives = 234/436 (53%), Gaps = 88/436 (20%)
Query: 8 AGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
A A+GAKTARACDSC++RRARW+C ADDAFLC CD+LVHSAN LA RHERVRL++AS
Sbjct: 6 ANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPA 65
Query: 68 VTT------------TQAWHSGFTRKARTPRQKNHNLALQQRFKEKVLFNNTSSVVLPLV 115
V WH GFTRKARTPR N SS+ LV
Sbjct: 66 VVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGK--------------KNNSSIFHDLV 111
Query: 116 PELGGEEQEQLVDDDESEEQLLFRVPVFEPFDGE-------------PCIKE-LKYNTQN 161
P++ E+Q D+ E EEQL+ +VPV +P E P I+ L +
Sbjct: 112 PDISIEDQ---TDNYELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEE 168
Query: 162 DAADDEEACNLESFCDFDVDLAEFAASVQSLLGNGV------HEDLG----EVFNYTKED 211
D A E+C L F D++L EFAA V++LLG G+ E+LG E+F K++
Sbjct: 169 DNA---ESC-LNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKDE 224
Query: 212 EIAAYVIGDAATSEKAKVKDEELDTADTNRGCHLESVLDITSNEAFEWNID--SMLQEEK 269
A + +D D +R D+ FE + D S + +
Sbjct: 225 IEEEVEEIKAMS----------MDIFDDDRK-------DVDGTVPFELSFDYESSHKTSE 267
Query: 270 EAVVAS--NSGE-----REEGTKRDMFLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDF 322
E V+ + +SGE +EE K + LRLNY+ VI+ W QG PW++G PP+ + D
Sbjct: 268 EEVMKNVESSGECVVKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISG 327
Query: 323 LP--NCMGLSGADEEYRNLRGHIV---GRGDEGREARVLRYREKRRTRLFAKKIRYEVRK 377
P + + G + G + G GD GREARV RYREKRRTRLF+KKIRYEVRK
Sbjct: 328 WPAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRK 387
Query: 378 LNAEKRPRLKGRFVKR 393
LNAEKRPR+KGRFVKR
Sbjct: 388 LNAEKRPRMKGRFVKR 403
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 223/429 (51%), Gaps = 82/429 (19%)
Query: 6 RGAGALGAK-TARACDSCLRR-RARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQS 63
R A G K AR CD+C++R RA W+C ADDAFLC CD +HSAN LA RHERVRLQS
Sbjct: 8 RTASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQS 67
Query: 64 ASSKVT---TTQAWHSGFTRKARTPRQKNHNLALQQRFKEKVLFNNTSSVVLPLVPELGG 120
+S T TT W+ GF RKARTPR K+ EK+L ++ PLVPELGG
Sbjct: 68 SSPTETADKTTSVWYEGFRRKARTPRSKSCAF-------EKLLQIESND---PLVPELGG 117
Query: 121 EEQE---QLVDDDESEEQLLFRVPVFEPF--------DGEPCIKELKYNTQNDA------ 163
+E + +E+EE L VPVF+PF +G + + NT +
Sbjct: 118 DEDDGFFSFSSVEETEESLNCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELGEVE 177
Query: 164 ---ADDEEACNLESFCDFDVDLAEFAASVQSL-------LGNGVHEDLGEVFNYTKEDEI 213
DDE F D+DL + V+SL LG D+G + KE+
Sbjct: 178 KAIMDDE---GFMGFVPLDMDLEDLTMDVESLLEEEQLCLGFKEPNDVGVI----KEENK 230
Query: 214 AAYVIGDAATSEKAKVKDEELDTADTNRGCHLESVLDITSNEAFEWNIDSMLQEEKEAVV 273
+ I + ++ K +DEE + A G +S ++E
Sbjct: 231 VGFEI-NCKDLKRVKDEDEEEEEAKCENGGSKDS--------------------DRE--- 266
Query: 274 ASNSGEREEGTKRDMFLRLNYEEVITAWASQGSPWTTGNPPK-FNSDEDFLPNCMG---- 328
ASN +R K +FLRL+Y VI+AW + GSPW TG P+ LP+ +G
Sbjct: 267 ASNDKDR----KTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEK 322
Query: 329 LSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKG 388
L +D +G G D REARVLRY+EKRRTRLF+KKIRYEVRKLNAE+RPR+KG
Sbjct: 323 LMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKG 382
Query: 389 RFVKRTCLV 397
RFVKRT L+
Sbjct: 383 RFVKRTSLL 391
>AT1G49130.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175936 REVERSE LENGTH=326
Length = 326
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 184/393 (46%), Gaps = 94/393 (23%)
Query: 13 AKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERV--RLQSASSKV-- 68
K RAC+ CL + A W+C +DDAFLCH CD VHSAN +A++HERV R S+ V
Sbjct: 22 VKQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRG 81
Query: 69 --TTTQAWHSGFTRKARTPRQKNHNLALQQRFKEKVLFNNTSSVVLPLVPELGGEEQEQL 126
T T WHSGF RKARTPR + + QQ+ ++ + P VPE+GGE
Sbjct: 82 GTTLTSVWHSGFRRKARTPRSR-YEKKPQQKIDDERRRED------PRVPEIGGE----- 129
Query: 127 VDDDESEEQLLFRVPVFEPFDGEPCIKELKYNTQNDAADDEEACNLESFCDFDVDLAEFA 186
++F +P +A DD+ + F F ++ F
Sbjct: 130 ---------VMFFIP--------------------EANDDDMTSLVPEFEGF-TEMGFFL 159
Query: 187 ASVQSLLGNGVHEDLGEVFNYTKEDEIAAYVIGDAATSEKAKVKDEELDTADTNRGCHLE 246
++ NG E + FN+ +E A T E EE D D C +
Sbjct: 160 SN-----HNGTEETTKQ-FNFEEE----------ADTMEDLYYNGEEEDKTDGAEACPGQ 203
Query: 247 SVLDITSNEAFEWNIDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVITAWASQGS 306
++ + D+++ V+ + E E+ + + RLNYE VI AW Q S
Sbjct: 204 YLMSCKK------DYDNVI------TVSEKTEEIEDCYENNARHRLNYENVIAAWDKQES 251
Query: 307 PWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRL 366
P N S +P G +E+ R REARV RYR+KR+ RL
Sbjct: 252 PRDVKNN---TSSFQLVP-----PGIEEK----------RVRSEREARVWRYRDKRKNRL 293
Query: 367 FAKKIRYEVRKLNAEKRPRLKGRFVKRTCLVGA 399
F KKIRYEVRK+NA+KRPR+KGRFV+R+ + +
Sbjct: 294 FEKKIRYEVRKVNADKRPRMKGRFVRRSLAIDS 326
>AT1G49130.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175811 REVERSE LENGTH=319
Length = 319
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 184/393 (46%), Gaps = 94/393 (23%)
Query: 13 AKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERV--RLQSASSKV-- 68
K RAC+ CL + A W+C +DDAFLCH CD VHSAN +A++HERV R S+ V
Sbjct: 15 VKQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRG 74
Query: 69 --TTTQAWHSGFTRKARTPRQKNHNLALQQRFKEKVLFNNTSSVVLPLVPELGGEEQEQL 126
T T WHSGF RKARTPR + + QQ+ ++ + P VPE+GGE
Sbjct: 75 GTTLTSVWHSGFRRKARTPRSR-YEKKPQQKIDDERRRED------PRVPEIGGE----- 122
Query: 127 VDDDESEEQLLFRVPVFEPFDGEPCIKELKYNTQNDAADDEEACNLESFCDFDVDLAEFA 186
++F +P +A DD+ + F F ++ F
Sbjct: 123 ---------VMFFIP--------------------EANDDDMTSLVPEFEGF-TEMGFFL 152
Query: 187 ASVQSLLGNGVHEDLGEVFNYTKEDEIAAYVIGDAATSEKAKVKDEELDTADTNRGCHLE 246
++ NG E + FN+ +E A T E EE D D C +
Sbjct: 153 SN-----HNGTEETTKQ-FNFEEE----------ADTMEDLYYNGEEEDKTDGAEACPGQ 196
Query: 247 SVLDITSNEAFEWNIDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVITAWASQGS 306
++ + D+++ V+ + E E+ + + RLNYE VI AW Q S
Sbjct: 197 YLMSCKK------DYDNVI------TVSEKTEEIEDCYENNARHRLNYENVIAAWDKQES 244
Query: 307 PWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRL 366
P N S +P G +E+ R REARV RYR+KR+ RL
Sbjct: 245 PRDVKNN---TSSFQLVP-----PGIEEK----------RVRSEREARVWRYRDKRKNRL 286
Query: 367 FAKKIRYEVRKLNAEKRPRLKGRFVKRTCLVGA 399
F KKIRYEVRK+NA+KRPR+KGRFV+R+ + +
Sbjct: 287 FEKKIRYEVRKVNADKRPRMKGRFVRRSLAIDS 319
>AT5G14370.1 | Symbols: | CCT motif family protein |
chr5:4632147-4633651 REVERSE LENGTH=339
Length = 339
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 20/117 (17%)
Query: 288 MFLRLNYEEVITAWASQGSPWTTGNPPK-----------FNSDEDFLPNCMGLSGADEEY 336
+ L+L+YE+++ AW+ +G+ + G PP+ FN D N + +
Sbjct: 229 LALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFN-DGGEAGNLWAVPEMETTE 287
Query: 337 RNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
R RGH REA +LRY+EKR+ RLF+K+IRY+VRKLNAEKRPR+KGRFVKR
Sbjct: 288 RLWRGH--------REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>AT1G07050.1 | Symbols: | CCT motif family protein |
chr1:2164327-2165133 REVERSE LENGTH=195
Length = 195
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 66/107 (61%), Gaps = 22/107 (20%)
Query: 290 LRLNYEEVITAWASQGSP-WTTGNPPKFNSDEDFLPNCM--GLSGADEEYRNLRGHIVGR 346
L LN++EVI AW+ P WT D L N + G EE RN+R
Sbjct: 106 LNLNHQEVIDAWSDHQKPLWT---------DTSTLDNSVYRGEVPVIEEKRNMR------ 150
Query: 347 GDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA VLRY+EKR++RLF+KKIRY+VRKLNA+KRPR KGRFVKR
Sbjct: 151 ----REASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 |
chr5:23168393-23170763 FORWARD LENGTH=435
Length = 435
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 19/107 (17%)
Query: 289 FLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLR-GHIVGRG 347
L+L+Y+ V+ AW+ + SP+ DE + G++ N R I G
Sbjct: 336 LLKLDYDGVLEAWSDKTSPF---------PDE--------IQGSEAVDVNARLAQIDLFG 378
Query: 348 DEG-REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
D G REA VLRY+EKRRTRLF+KKIRY+VRKLNA++RPR+KGRFV+R
Sbjct: 379 DSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>AT4G25990.1 | Symbols: CIL | CCT motif family protein |
chr4:13191937-13193543 REVERSE LENGTH=394
Length = 394
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 15/106 (14%)
Query: 289 FLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGD 348
L+L+Y+ V+ AW+ + SP+ SDE +G ++ G I G+
Sbjct: 292 LLKLDYDGVLEAWSGKESPF---------SDE-----ILGSDADGVDFHVRLGEIDLFGE 337
Query: 349 EG-REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
G REA VLRY+EKRR RLF+KKIRY+VRKLNA++RPR+KGRFV+R
Sbjct: 338 SGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 383
>AT4G25990.2 | Symbols: CIL | CCT motif family protein |
chr4:13191937-13193543 REVERSE LENGTH=409
Length = 409
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 30/121 (24%)
Query: 289 FLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLRGHIVGRGD 348
L+L+Y+ V+ AW+ + SP+ SDE +G ++ G I G+
Sbjct: 292 LLKLDYDGVLEAWSGKESPF---------SDE-----ILGSDADGVDFHVRLGEIDLFGE 337
Query: 349 EG-REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLK---------------GRFVK 392
G REA VLRY+EKRR RLF+KKIRY+VRKLNA++RPR+K GRFV+
Sbjct: 338 SGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKVKDWHCNIVVVSHQQGRFVR 397
Query: 393 R 393
R
Sbjct: 398 R 398
>AT5G57180.1 | Symbols: CIA2 | chloroplast import apparatus 2 |
chr5:23168393-23170294 FORWARD LENGTH=424
Length = 424
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 19/101 (18%)
Query: 289 FLRLNYEEVITAWASQGSPWTTGNPPKFNSDEDFLPNCMGLSGADEEYRNLR-GHIVGRG 347
L+L+Y+ V+ AW+ + SP+ DE + G++ N R I G
Sbjct: 336 LLKLDYDGVLEAWSDKTSPF---------PDE--------IQGSEAVDVNARLAQIDLFG 378
Query: 348 DEG-REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLK 387
D G REA VLRY+EKRRTRLF+KKIRY+VRKLNA++RPR+K
Sbjct: 379 DSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMK 419
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 38/64 (59%)
Query: 331 GADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRF 390
G E N V REARVLRYREKR+ R F K IRY RK AE RPR+KGRF
Sbjct: 209 GVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 268
Query: 391 VKRT 394
KRT
Sbjct: 269 AKRT 272
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 13 AKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
A ++R CDSC A FC AD AFLC CD +H+AN+LASRHERV L
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 34/44 (77%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REARVLRYREKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 8 AGALGAKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERV 59
+G GA AR+CD+C A FC D AFLC CDT +HS +RHERV
Sbjct: 12 SGGWGA-AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERV 58
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
Query: 264 MLQEEKEAVVASNSGE----REEGTKRDMFLRLNYEEVITAWASQGSPWTTGNP--PKFN 317
M QE++ ++ N G R + ++ ++ S S T NP PK
Sbjct: 210 MYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKAV 269
Query: 318 SDEDFLPNCMGLSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRK 377
+D+ P LS D REARVLRYREK++ R F K IRY RK
Sbjct: 270 TDQPPYPPAQMLSPRD-----------------REARVLRYREKKKMRKFEKTIRYASRK 312
Query: 378 LNAEKRPRLKGRFVKR 393
AEKRPR+KGRF K+
Sbjct: 313 AYAEKRPRIKGRFAKK 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
A+ACD+C +C AD A+LC CD VH+AN+LASRHERVR+
Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV 54
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 17 RACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
R C SC R A +FC AD A LC CD+ +HSAN LA RH+RV +
Sbjct: 53 RVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REARV+RYREKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 339 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERV 59
++ CDSC A +C D AFLC CD+ VH+AN+LASRH RV
Sbjct: 47 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV 90
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 34/43 (79%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REARVLRYREK++TR F K IRY RK AE RPR+KGRF KR
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
ARACD+C +C AD A+LC CD VH+AN++ASRHERVR+
Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV 58
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 17 RACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKVTTTQA 73
R C SC A + C AD A LC CD +HSAN LA RH+RV + S+ ++ A
Sbjct: 57 RVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMA 113
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REARVLRYREKR+TR F K IRY RK AE RPR+ GRF KR
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 14 KTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSAS----SKVT 69
K R C+SC R A + C ADDA LC CD+ VHSAN LA RH+RV + S S +T
Sbjct: 58 KRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMT 117
Query: 70 TTQ 72
TT
Sbjct: 118 TTH 120
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
AR CD+C +C AD A+LC CD VHSAN++ASRH+RVR+
Sbjct: 17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 13 AKTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
A ++R CDSC A FC AD AFLC CD +H+AN+LASRHERV L
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 14 KTARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSAS----SKVT 69
K R C+SC R A + C ADDA LC CD+ VHSAN LA RH+RV + S S +T
Sbjct: 58 KRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMT 117
Query: 70 TTQ 72
TT
Sbjct: 118 TTH 120
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 16 ARACDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRL 61
AR CD+C +C AD A+LC CD VHSAN++ASRH+RVR+
Sbjct: 17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKVTTT 71
CD C + A FC AD+A LC GCD VH AN+LAS+H R L SS T++
Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSS 57
>AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7 |
chr5:638283-641461 REVERSE LENGTH=727
Length = 727
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRTC 395
REA + ++R+KR+ R F KK+RY+ RK AE+RPR++G+FV++T
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTA 713
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 349 EGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
+ R+ + RY+EK++TR + K IRYE RK AE R R+KGRFVK T
Sbjct: 355 QNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKAT 400
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 349 EGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
+ R+ + RY+EK++TR + K IRYE RK AE R R+KGRFVK T
Sbjct: 354 QNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKAT 399
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A C AD+A LC CD +H+AN+LAS+H+R+ L S S+K
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK 53
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A C AD+A LC CD VH+AN+LAS+H+R+ L S S+K
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTK 53
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
CD C + A C AD+A LC CD +H+AN+LAS+H+R+ L S S+K
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK 53
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19232874-19234901 FORWARD LENGTH=468
Length = 468
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
REA ++++R KR+ R F KK+RY+ RK AE+RPR+KG+FV+
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19233422-19234901 FORWARD LENGTH=351
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
REA ++++R KR+ R F KK+RY+ RK AE+RPR+KG+FV+
Sbjct: 300 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 341
>AT1G04500.1 | Symbols: | CCT motif family protein |
chr1:1221757-1224235 REVERSE LENGTH=386
Length = 386
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 329 LSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKG 388
++G D+ N G + E R+ ++ RY +KR R F+KKI+Y RK A+ RPR++G
Sbjct: 269 ITGLDDPSFNKVGKLSA---EQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRG 325
Query: 389 RFVKR 393
RF K
Sbjct: 326 RFAKN 330
>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
chr5:8356204-8358873 REVERSE LENGTH=667
Length = 667
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKRT 394
REA + ++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 618 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>AT2G46670.1 | Symbols: | CCT motif family protein |
chr2:19164589-19165233 REVERSE LENGTH=183
Length = 183
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
REA ++++R KR+ R F KK+RY+ RK AE+RPR+KG+FV+
Sbjct: 132 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
-containing response regulator protein |
chr5:24675540-24678176 FORWARD LENGTH=618
Length = 618
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
RE +L++R KR R F KKIRY RK AE+RPR+KG+FV++
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575
>AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R KR+ R F KK+RY RK AE+RP +KG+F+++
Sbjct: 442 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=495
Length = 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R KR+ R F KK+RY RK AE+RP +KG+F+++
Sbjct: 442 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASS 66
CD+C A FC AD+A LC CD VH N+LASRH RV L S+
Sbjct: 5 CDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSN 52
>AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 |
chr5:24198215-24200502 REVERSE LENGTH=522
Length = 522
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVKR 393
REA ++++R KR+ R F KK+RY RK AE+RP +KG+F+++
Sbjct: 469 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 511
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 261 IDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVIT-----AWASQGSPWTTGNPPK 315
IDS+ + + A NS + D F+ E +I A ++ TG
Sbjct: 221 IDSLFHKHQTAPEGGNS--VQPAGSNDSFMSSKTEPIICFASKPAHSNISFSGVTGESSA 278
Query: 316 FNSDEDFLPNCMGLSGADEEY------RNLRGHIVGRGDEGREARVLRYREKRRTRLFAK 369
+ E + + LSG Y N H V R + V+RY+EK++ R F K
Sbjct: 279 GDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNA-----VMRYKEKKKARKFDK 333
Query: 370 KIRYEVRKLNAEKRPRLKGRFVK 392
++RY RK A+ R R+KGRFVK
Sbjct: 334 RVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 261 IDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVIT-----AWASQGSPWTTGNPPK 315
IDS+ + + A NS + D F+ E +I A ++ TG
Sbjct: 221 IDSLFHKHQTAPEGGNS--VQPAGSNDSFMSSKTEPIICFASKPAHSNISFSGVTGESSA 278
Query: 316 FNSDEDFLPNCMGLSGADEEY------RNLRGHIVGRGDEGREARVLRYREKRRTRLFAK 369
+ E + + LSG Y N H V R + V+RY+EK++ R F K
Sbjct: 279 GDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNA-----VMRYKEKKKARKFDK 333
Query: 370 KIRYEVRKLNAEKRPRLKGRFVK 392
++RY RK A+ R R+KGRFVK
Sbjct: 334 RVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 261 IDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVIT-----AWASQGSPWTTGNPPK 315
IDS+ + + A NS + D F+ E +I A ++ TG
Sbjct: 221 IDSLFHKHQTAPEGGNS--VQPAGSNDSFMSSKTEPIICFASKPAHSNISFSGVTGESSA 278
Query: 316 FNSDEDFLPNCMGLSGADEEY------RNLRGHIVGRGDEGREARVLRYREKRRTRLFAK 369
+ E + + LSG Y N H V R + V+RY+EK++ R F K
Sbjct: 279 GDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNA-----VMRYKEKKKARKFDK 333
Query: 370 KIRYEVRKLNAEKRPRLKGRFVK 392
++RY RK A+ R R+KGRFVK
Sbjct: 334 RVRYASRKARADVRRRVKGRFVK 356
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 261 IDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEVIT-----AWASQGSPWTTGNPPK 315
IDS+ + + A NS + D F+ E +I A ++ TG
Sbjct: 221 IDSLFHKHQTAPEGGNS--VQPAGSNDSFMSSKTEPIICFASKPAHSNISFSGVTGESSA 278
Query: 316 FNSDEDFLPNCMGLSGADEEY------RNLRGHIVGRGDEGREARVLRYREKRRTRLFAK 369
+ E + + LSG Y N H V R + V+RY+EK++ R F K
Sbjct: 279 GDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNA-----VMRYKEKKKARKFDK 333
Query: 370 KIRYEVRKLNAEKRPRLKGRFVK 392
++RY RK A+ R R+KGRFVK
Sbjct: 334 RVRYASRKARADVRRRVKGRFVK 356
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein
1 | chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
C+ C A C AD+A LC CD +H+AN+LA +H+RV L +++S +
Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSI 54
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSKV 68
C+ C A C AD+A LC CD +H+AN+LA +H+RV L +++S +
Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSI 54
>AT2G33350.2 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=409
Length = 409
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 344 VGR-GDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
VG+ E R+ ++ RY +KR R F KKI+Y RK A+ RPR++GRF K
Sbjct: 302 VGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 351
>AT2G33350.1 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=410
Length = 410
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 344 VGR-GDEGREARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
VG+ E R+ ++ RY +KR R F KKI+Y RK A+ RPR++GRF K
Sbjct: 303 VGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 256 AFEWNIDSMLQEEKEAVVASNSGEREEGTKRDMFLRLNYEEV-ITAWASQGSPWTTGNPP 314
A + I++ + E + G +E K+D + R +V T S P T G+
Sbjct: 290 ASSFTINNFVDHMNETCSTNVKGVKE--IKKDDYKRSTSGQVQPTKSESNNRPITFGSEK 347
Query: 315 KFNSDED--FLPNCMGLSGADEEYRNLRGHIVGRGDEGREARVLRYREKRRTRLFAKKIR 372
NS D F + G S + + R + R + RY+EKR+TR + K IR
Sbjct: 348 GSNSSSDLHFTEHIAGTSCKTTRLVATKADL-ERLAQNRGDAMQRYKEKRKTRRYDKTIR 406
Query: 373 YEVRKLNAEKRPRLKGRFVK 392
YE RK A+ R R++GRFVK
Sbjct: 407 YESRKARADTRLRVRGRFVK 426
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 351 REARVLRYREKRRTRLFAKKIRYEVRKLNAEKRPRLKGRFVK 392
R + + RY+EK+++R + K IRYE RK+ AE R R++GRF K
Sbjct: 287 RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASS 66
CD+C A FC AD+A LC CD VH N+LASRH RV L S+
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSN 52
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 19 CDSCLRRRARWFCGADDAFLCHGCDTLVHSANQLASRHERVRLQSASSK 67
C C + A FC AD+A LC+GCD VH AN+LA +H R L S + K
Sbjct: 5 CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFK 53