Miyakogusa Predicted Gene

Lj4g3v3099180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3099180.1 Non Chatacterized Hit- tr|B8AAP3|B8AAP3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,88.46,0.00004,SUBFAMILY NOT NAMED,NULL; F-BOX AND WD40 DOMAIN
PROTEIN,NULL; Domain always found upstream of DENN d,CUFF.52301.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S...   440   e-124
AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / S...   439   e-124
AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / S...   438   e-123
AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...    52   4e-07
AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein...    51   9e-07

>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18139419-18148826 REVERSE
           LENGTH=1187
          Length = 1187

 Score =  440 bits (1131), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/286 (72%), Positives = 237/286 (82%)

Query: 1   MSRIFEYFVVCGIGPEIRTVDGSKGYHGPACMYLPSLLDQYXXXXXXXXXXXXXXXXXXX 60
           M RIFEYFVVCG+GPE+RTVDG  G+HG    YLP+LLDQ+                   
Sbjct: 1   MGRIFEYFVVCGLGPEMRTVDGDLGFHGMQTFYLPALLDQFPPTDQSPYPAPPPQLPTCV 60

Query: 61  XXAGVEFYSSGFDSSDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN 120
             AGVEF+SSGF SSDP++FPRSYPIVLTEGDGSKI+VSCI+FRD VCEDI EAYR+  N
Sbjct: 61  LPAGVEFHSSGFVSSDPASFPRSYPIVLTEGDGSKIFVSCIAFRDRVCEDIIEAYRLPPN 120

Query: 121 SYADKCICLVSRSPSFRVIRTALEELFALCFSPNGSSKPLWDVIAHVVSSVPLPTPGKER 180
           +YADKCICLVS +P+FRV+R +LEE+F LCFS  GS KPLWD+IA++VS+VPLPTPGK+R
Sbjct: 121 TYADKCICLVSHAPNFRVLRNSLEEIFVLCFSSEGSCKPLWDIIAYMVSNVPLPTPGKDR 180

Query: 181 VLFAIENCLLPVEAPPNHGLPYVDISFQPLVQCLDVENLIILFTAVLIERRILLRANKYS 240
           VLFA+ENCLL VEAPP   LP  DIS QPLVQCLDV+NLI LFT+VL+ERRIL+R+NKYS
Sbjct: 181 VLFAVENCLLSVEAPPEDSLPQADISLQPLVQCLDVDNLIKLFTSVLVERRILIRSNKYS 240

Query: 241 LLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHS 286
           LLTLVSE+ICHLIYPFRW  VYIPLLFFSGVDYIDAPTPYMMGLHS
Sbjct: 241 LLTLVSESICHLIYPFRWLQVYIPLLFFSGVDYIDAPTPYMMGLHS 286


>AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18140457-18148826 REVERSE
           LENGTH=1040
          Length = 1040

 Score =  439 bits (1130), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/286 (72%), Positives = 237/286 (82%)

Query: 1   MSRIFEYFVVCGIGPEIRTVDGSKGYHGPACMYLPSLLDQYXXXXXXXXXXXXXXXXXXX 60
           M RIFEYFVVCG+GPE+RTVDG  G+HG    YLP+LLDQ+                   
Sbjct: 1   MGRIFEYFVVCGLGPEMRTVDGDLGFHGMQTFYLPALLDQFPPTDQSPYPAPPPQLPTCV 60

Query: 61  XXAGVEFYSSGFDSSDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN 120
             AGVEF+SSGF SSDP++FPRSYPIVLTEGDGSKI+VSCI+FRD VCEDI EAYR+  N
Sbjct: 61  LPAGVEFHSSGFVSSDPASFPRSYPIVLTEGDGSKIFVSCIAFRDRVCEDIIEAYRLPPN 120

Query: 121 SYADKCICLVSRSPSFRVIRTALEELFALCFSPNGSSKPLWDVIAHVVSSVPLPTPGKER 180
           +YADKCICLVS +P+FRV+R +LEE+F LCFS  GS KPLWD+IA++VS+VPLPTPGK+R
Sbjct: 121 TYADKCICLVSHAPNFRVLRNSLEEIFVLCFSSEGSCKPLWDIIAYMVSNVPLPTPGKDR 180

Query: 181 VLFAIENCLLPVEAPPNHGLPYVDISFQPLVQCLDVENLIILFTAVLIERRILLRANKYS 240
           VLFA+ENCLL VEAPP   LP  DIS QPLVQCLDV+NLI LFT+VL+ERRIL+R+NKYS
Sbjct: 181 VLFAVENCLLSVEAPPEDSLPQADISLQPLVQCLDVDNLIKLFTSVLVERRILIRSNKYS 240

Query: 241 LLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHS 286
           LLTLVSE+ICHLIYPFRW  VYIPLLFFSGVDYIDAPTPYMMGLHS
Sbjct: 241 LLTLVSESICHLIYPFRWLQVYIPLLFFSGVDYIDAPTPYMMGLHS 286


>AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18142007-18148826 REVERSE
           LENGTH=909
          Length = 909

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/286 (72%), Positives = 237/286 (82%)

Query: 1   MSRIFEYFVVCGIGPEIRTVDGSKGYHGPACMYLPSLLDQYXXXXXXXXXXXXXXXXXXX 60
           M RIFEYFVVCG+GPE+RTVDG  G+HG    YLP+LLDQ+                   
Sbjct: 1   MGRIFEYFVVCGLGPEMRTVDGDLGFHGMQTFYLPALLDQFPPTDQSPYPAPPPQLPTCV 60

Query: 61  XXAGVEFYSSGFDSSDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN 120
             AGVEF+SSGF SSDP++FPRSYPIVLTEGDGSKI+VSCI+FRD VCEDI EAYR+  N
Sbjct: 61  LPAGVEFHSSGFVSSDPASFPRSYPIVLTEGDGSKIFVSCIAFRDRVCEDIIEAYRLPPN 120

Query: 121 SYADKCICLVSRSPSFRVIRTALEELFALCFSPNGSSKPLWDVIAHVVSSVPLPTPGKER 180
           +YADKCICLVS +P+FRV+R +LEE+F LCFS  GS KPLWD+IA++VS+VPLPTPGK+R
Sbjct: 121 TYADKCICLVSHAPNFRVLRNSLEEIFVLCFSSEGSCKPLWDIIAYMVSNVPLPTPGKDR 180

Query: 181 VLFAIENCLLPVEAPPNHGLPYVDISFQPLVQCLDVENLIILFTAVLIERRILLRANKYS 240
           VLFA+ENCLL VEAPP   LP  DIS QPLVQCLDV+NLI LFT+VL+ERRIL+R+NKYS
Sbjct: 181 VLFAVENCLLSVEAPPEDSLPQADISLQPLVQCLDVDNLIKLFTSVLVERRILIRSNKYS 240

Query: 241 LLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHS 286
           LLTLVSE+ICHLIYPFRW  VYIPLLFFSGVDYIDAPTPYMMGLHS
Sbjct: 241 LLTLVSESICHLIYPFRWLQVYIPLLFFSGVDYIDAPTPYMMGLHS 286


>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 47/73 (64%)

Query: 214 LDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDY 273
           L +E ++ L   VL+E++I++      +L+ +  ++  +I PF+WQ + +P+L     D+
Sbjct: 809 LSLETIMSLLAGVLLEKQIVIICPNLGVLSAIVLSLVPMIRPFQWQSLLLPVLPGRMFDF 868

Query: 274 IDAPTPYMMGLHS 286
           ++AP P+++G+HS
Sbjct: 869 LEAPVPFLVGIHS 881


>AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr5:13742458-13747464 REVERSE LENGTH=765
          Length = 765

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 46/73 (63%)

Query: 214 LDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDY 273
           L ++N++++    L+E++I+   +   +L     +I  +I PFRWQ + +P+L    +++
Sbjct: 547 LRLDNVLMILAGALLEKQIVFVCSNLGILAASVLSIIPVIRPFRWQSLLMPVLPDDMLEF 606

Query: 274 IDAPTPYMMGLHS 286
           +DAP PY++G+ +
Sbjct: 607 LDAPVPYIVGVKN 619