Miyakogusa Predicted Gene

Lj4g3v3093960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3093960.1 Non Chatacterized Hit- tr|C5WV23|C5WV23_SORBI
Putative uncharacterized protein Sb01g003340
OS=Sorghu,58.57,8e-18,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.52244.1
         (133 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24450.1 | Symbols:  | Heavy metal transport/detoxification s...   133   3e-32
AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    91   3e-19
AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    91   3e-19
AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    89   1e-18
AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    89   1e-18
AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper chape...    88   1e-18
AT2G28660.1 | Symbols:  | Chloroplast-targeted copper chaperone ...    85   2e-17
AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper chape...    84   4e-17
AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification s...    57   5e-09
AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 ...    54   4e-08
AT3G56240.1 | Symbols: CCH | copper chaperone | chr3:20863460-20...    50   4e-07
AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification s...    50   6e-07
AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification s...    48   2e-06
AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification s...    48   2e-06
AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification s...    48   2e-06
AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification s...    48   2e-06
AT3G21490.1 | Symbols:  | Heavy metal transport/detoxification s...    48   2e-06
AT3G56891.1 | Symbols:  | Heavy metal transport/detoxification s...    47   3e-06
AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification s...    47   3e-06
AT1G23000.1 | Symbols:  | Heavy metal transport/detoxification s...    47   3e-06
AT5G05365.1 | Symbols:  | Heavy metal transport/detoxification s...    47   3e-06
AT3G02960.1 | Symbols:  | Heavy metal transport/detoxification s...    47   5e-06
AT5G03380.1 | Symbols:  | Heavy metal transport/detoxification s...    45   1e-05

>AT3G24450.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:8880286-8881611 REVERSE
           LENGTH=140
          Length = 140

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 103/135 (76%), Gaps = 6/135 (4%)

Query: 1   MGKIGRMLDTFCLSSCSNPCFCVNSI-EFEDEFESKPLIANGSDHK---LRLKDVVAG-- 54
           + KIGR+ D   L +    CFC+N++ + E+EFE +PLI + ++     +RLKDVVA   
Sbjct: 4   LQKIGRVWDCLFLPTNQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKDVVAADH 63

Query: 55  KQTLGFQLKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPME 114
           +QTL F LKPKIV L+VSMHC+ CA+KVEKHISKL+GV+ YKV+L +K VVV G+ILP++
Sbjct: 64  RQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVD 123

Query: 115 VLESVSKVKNAQLWN 129
           VLES+ KVKNAQLW+
Sbjct: 124 VLESICKVKNAQLWS 138


>AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:585713-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+LRVS+HC  CA KV+KH+SKL+GV+SY +D   K V V GD+ P+ VL S+SKVKN
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 125 AQLW 128
           AQ W
Sbjct: 310 AQFW 313


>AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:584486-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+LRVS+HC  CA KV+KH+SKL+GV+SY +D   K V V GD+ P+ VL S+SKVKN
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 125 AQLW 128
           AQ W
Sbjct: 310 AQFW 313


>AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=258
          Length = 258

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+L+VS+HC  C  KV KH+++++GV+S+ +D   K V V GDI P+E+L+S+SKVKN
Sbjct: 180 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 239

Query: 125 AQLW-NPT 131
           AQ W NPT
Sbjct: 240 AQFWTNPT 247


>AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=259
          Length = 259

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+L+VS+HC  C  KV KH+++++GV+S+ +D   K V V GDI P+E+L+S+SKVKN
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 125 AQLW-NPT 131
           AQ W NPT
Sbjct: 241 AQFWTNPT 248


>AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper
           chaperone protein | chr3:19845199-19846583 FORWARD
           LENGTH=247
          Length = 247

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 2/68 (2%)

Query: 65  KIVILRVSMHCH--ACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV 122
           ++V+LRVS+HCH   C  KV+KH+SK++GV+S+ +D  +K V V GDI P+EVL  +SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 123 KNAQLWNP 130
           KNAQ W P
Sbjct: 228 KNAQFWTP 235


>AT2G28660.1 | Symbols:  | Chloroplast-targeted copper chaperone
           protein | chr2:12295419-12296944 FORWARD LENGTH=265
          Length = 265

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKN 124
           ++V+LRVS+HC  C  KV KHISK+EGV+SY +DL  K V V+G I P+ ++ES+SKVK 
Sbjct: 183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVKF 242

Query: 125 AQLW 128
           AQLW
Sbjct: 243 AQLW 246


>AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper
           chaperone protein | chr3:19845199-19846583 FORWARD
           LENGTH=248
          Length = 248

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 3/69 (4%)

Query: 65  KIVILRVSMHCH--ACARKVEKHISKLE-GVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           ++V+LRVS+HCH   C  KV+KH+SK++ GV+S+ +D  +K V V GDI P+EVL  +SK
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSK 227

Query: 122 VKNAQLWNP 130
           VKNAQ W P
Sbjct: 228 VKNAQFWTP 236


>AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:9803796-9805036 FORWARD
           LENGTH=352
          Length = 352

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 68  ILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-KNAQ 126
           +LRVS+HC  C RK++K +SK++GV +  +D+  + V VIG++ P  +++ + K  ++A+
Sbjct: 33  VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query: 127 LWNPTS 132
           LW PTS
Sbjct: 93  LW-PTS 97


>AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 |
           chr1:24686445-24687327 REVERSE LENGTH=106
          Length = 106

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-K 123
           + V+LRV+M C  C   V++ + K+EGV S+ VD+  + V V G++ P  VL++V+K  K
Sbjct: 33  QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 92

Query: 124 NAQLWNP 130
               W  
Sbjct: 93  KTAFWEA 99


>AT3G56240.1 | Symbols: CCH | copper chaperone |
           chr3:20863460-20864402 REVERSE LENGTH=121
          Length = 121

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-K 123
           + V+L+V M C  C   V + + K+EGV S+ +D+  + V V G++ P  V ++VSK  K
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query: 124 NAQLW 128
               W
Sbjct: 63  KTSYW 67


>AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1853048-1854673 REVERSE
           LENGTH=473
          Length = 473

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +K +  +L+V++HC  C +KV+K + K+EGV + K+D     V V G + P  +++ ++K
Sbjct: 7   MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAK 66

Query: 122 V-KNAQLW 128
             K+A++W
Sbjct: 67  SGKHAEIW 74


>AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=587
          Length = 587

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +K +  +L+V++HC  C +KV+K + K+EGV + K+D     V V G++ P  +++ + K
Sbjct: 7   MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66

Query: 122 V-KNAQLW 128
             K+A++W
Sbjct: 67  SGKHAEIW 74


>AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1488808-1491171 FORWARD
           LENGTH=577
          Length = 577

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +K +  +L+V++HC  C  KV+K + K+EGV S K D+    V V G+I P  +++ +SK
Sbjct: 7   MKLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSK 66


>AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=465
          Length = 465

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +K +  +L+V++HC  C +KV+K + K+EGV + K+D     V V G++ P  +++ + K
Sbjct: 7   MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66

Query: 122 V-KNAQLW 128
             K+A++W
Sbjct: 67  SGKHAEIW 74


>AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=465
          Length = 465

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           +K +  +L+V++HC  C +KV+K + K+EGV + K+D     V V G++ P  +++ + K
Sbjct: 7   MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66

Query: 122 V-KNAQLW 128
             K+A++W
Sbjct: 67  SGKHAEIW 74


>AT3G21490.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:7573065-7573669 FORWARD
           LENGTH=136
          Length = 136

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 30/46 (65%)

Query: 67  VILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILP 112
           V   VSMHC+ C RK+ + ISK +GV ++  D++N  VVV G I P
Sbjct: 16  VEFNVSMHCNDCERKIARVISKFKGVETFVTDMINHKVVVRGKIDP 61


>AT3G56891.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:21064199-21064922 REVERSE
           LENGTH=166
          Length = 166

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 50  DVVAGKQTLGFQLKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGD 109
           D + G   L   L   IV L V M C  C +KV + ISKL+GV + ++D+  + V V G 
Sbjct: 3   DWIHGNSRLPIALS--IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGY 60

Query: 110 ILPMEVLESVSKV-KNAQLW 128
           +   EVL+ V +  + A+ W
Sbjct: 61  VDREEVLKMVKRTGRTAEYW 80


>AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1853193-1854673 REVERSE
           LENGTH=349
          Length = 349

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 68  ILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-KNAQ 126
           +L+V++HC  C +KV+K + K+EGV + K+D     V V G + P  +++ ++K  K+A+
Sbjct: 13  VLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAE 72

Query: 127 LW 128
           +W
Sbjct: 73  IW 74


>AT1G23000.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr1:8143614-8144865 FORWARD
           LENGTH=358
          Length = 358

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 62  LKPKIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSK 121
           LK +   LRV++HC  C +KV+K + ++EGV   K++  ++ V V G +    ++  + K
Sbjct: 10  LKIQTFSLRVNIHCEGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDSATLINKLVK 69

Query: 122 V-KNAQLWNPT 131
             K+A+LW+P 
Sbjct: 70  AGKHAELWSPN 80


>AT5G05365.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:1590125-1590672 FORWARD
           LENGTH=77
          Length = 77

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 66  IVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKVKNA 125
           +V L+V++HC  C RK+ K I K+E + +Y VD     V V G++   +V+  + KV+ A
Sbjct: 4   VVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKVRKA 63

Query: 126 QL-WNP 130
            + W+ 
Sbjct: 64  AVKWDQ 69


>AT3G02960.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:667245-668626 REVERSE
           LENGTH=246
          Length = 246

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 65  KIVILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVSKV-- 122
           K  ILR++MHC  C  ++++ I K++G+ S + D    TVVV G + P +++E + K   
Sbjct: 126 KTAILRMNMHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLG 185

Query: 123 KNAQL 127
           K+A+L
Sbjct: 186 KHAEL 190


>AT5G03380.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:832400-834301 REVERSE
           LENGTH=392
          Length = 392

 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 34/54 (62%)

Query: 67  VILRVSMHCHACARKVEKHISKLEGVSSYKVDLVNKTVVVIGDILPMEVLESVS 120
           V++++ MHC  C +K+++     +GV   K+D  +  + VIG++ P+EV + V+
Sbjct: 26  VVMKLDMHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNVDPVEVRDKVA 79