Miyakogusa Predicted Gene

Lj4g3v3092820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3092820.1 Non Chatacterized Hit- tr|K3XFU6|K3XFU6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000765,32.31,6e-19,Frigida,Frigida-like; FAMILY NOT
NAMED,NULL,95866_g.1
         (291 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14900.1 | Symbols:  | FRIGIDA-like protein | chr4:8521759-85...   120   1e-27
AT3G22440.1 | Symbols:  | FRIGIDA-like protein | chr3:7959854-79...   119   2e-27
AT5G48385.1 | Symbols:  | FRIGIDA-like protein | chr5:19609471-1...    59   3e-09

>AT4G14900.1 | Symbols:  | FRIGIDA-like protein |
           chr4:8521759-8523607 REVERSE LENGTH=532
          Length = 532

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 146/299 (48%), Gaps = 41/299 (13%)

Query: 18  FQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTH 77
           F E Q   S++ +C  L+  LS HF+S++ +L +K+++L    +TLD+    ++E L   
Sbjct: 18  FFEFQKQASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQMIETLDNQTQSSIELLKHR 77

Query: 78  ETSIPERESAAAARIDEQKEAAIAEFRNPLPSDSE----------LPATLKSLSRKMDSS 127
           E +I      A  +++E+  AA+           E          L + LKSL  KMD+ 
Sbjct: 78  EVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTGEVDDGDGLLSALKSLCLKMDAR 137

Query: 128 ALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVEE-FLNSKMM 186
               F+++++KE   LR++I            P A+   V PPKLVL+AV E F   K  
Sbjct: 138 GFWGFVIARKKELENLRSQI------------PVALVDCVDPPKLVLEAVSEVFPVDKRG 185

Query: 187 GSKSGLTDKRWACGLLVQAL----SSDSPGFSRRVV-----ERAVGLLDSWKEQMDSDTE 237
           G +    D  WAC +++++L         G SR +V     E+A  + ++WK  ++   E
Sbjct: 186 GGEKVSNDFGWACVVILESLIPVMVDPVMGKSRLLVTPSVKEKAKEIAETWKASLE---E 242

Query: 238 KGAAEVV------MFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGDEM 290
           +G  E V       F+Q +V FG+  + D    RKLV+    R+ M KLA S+  GD+M
Sbjct: 243 RGGIENVKTPDVHTFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLGDQM 301


>AT3G22440.1 | Symbols:  | FRIGIDA-like protein |
           chr3:7959854-7961886 FORWARD LENGTH=532
          Length = 532

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 45/302 (14%)

Query: 18  FQELQTHKSIIATCTDLFTTLSTHFSSLQHSLSEKTQSLESKFQTLDSHYNETLESLNTH 77
           F+E Q   S++ +CT L+  LS HF+SL+ +L +K+++L+   +TLD+    +LESL   
Sbjct: 18  FEEFQKQTSLMTSCTLLWQELSDHFTSLEQNLMKKSEALKQMIETLDNQTQTSLESLKRR 77

Query: 78  ETSIPERESAAAARIDEQKEAAIAEFRNP--------------LPSDSELPATLKSLSRK 123
           E +I       A ++ E+  AA+                    +  +  L + LKSL  K
Sbjct: 78  EVTIDHSVEIVAGKVGERARAALESLEKARDGCGDGSNDDSGDVDDEEGLLSALKSLCLK 137

Query: 124 MDSSALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLVLDAVEEFLNS 183
           MD+     F+ +++KE   LR++I            P A+   V P  LVL+A+ E    
Sbjct: 138 MDARGFWNFVTARKKELENLRSKI------------PAALVDCVDPAMLVLEAISEVFPV 185

Query: 184 KMMGSKSGLTDKRWACGLLVQALS----SDSPGFSRRVV-----ERAVGLLDSWKEQMDS 234
              G K    D  WAC +++++L+        G SR +V     E+A  + ++WK+ ++ 
Sbjct: 186 DTRGDKVS-NDYGWACVVILESLTPVIVDPVIGKSRLLVTPSVKEKAKEIAETWKKSLE- 243

Query: 235 DTEKGAAEVV------MFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRDMAKLAASLDFGD 288
             E+G  E V       F+Q +V FG+    D    RKLV+    R+ M KLA S+  GD
Sbjct: 244 --ERGRIENVKTPDVHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVSVGLGD 301

Query: 289 EM 290
           +M
Sbjct: 302 QM 303


>AT5G48385.1 | Symbols:  | FRIGIDA-like protein |
           chr5:19609471-19611712 FORWARD LENGTH=558
          Length = 558

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 30/194 (15%)

Query: 114 PATLKSLSRKMDSSALLRFIVSKRKESSWLRAEIAPAIAEAVGAEMPPAIAGAVAPPKLV 173
           P  LK L   MDS+ L +F+   RK  + L+ EI            P A   A  P  LV
Sbjct: 173 PQLLK-LCGDMDSTGLHKFVSDNRKNLASLKEEI------------PMAFRAAANPASLV 219

Query: 174 LDAVEEFLNSKMM---GSK-SGLTDKRWACGLLVQALSSDSPGFSRR---------VVER 220
           LD++E F   +     G K + L   R  C +L++ LS    G  R          V  R
Sbjct: 220 LDSLEGFYPMEAPTADGKKDANLLGMRRTCIMLMECLSILLSGLDRNCLAVVLSQNVKHR 279

Query: 221 AVGLLDSWK---EQMDSDTEKGAA-EVVMFMQMVVCFGLRSRFDEEYLRKLVMEFGTRRD 276
           A  + + W    E +D D   G + E   F+Q++  F + + F E+ L KL+     RR 
Sbjct: 280 AKTIAEGWNPLLESLDMDACNGNSLEAHAFLQLLATFAIVADFKEDELLKLIPMVSRRRQ 339

Query: 277 MAKLAASLDFGDEM 290
            A+L  SL   ++M
Sbjct: 340 AAELCRSLGLAEKM 353