Miyakogusa Predicted Gene
- Lj4g3v3081730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3081730.1 tr|G7L8X6|G7L8X6_MEDTR Ras-related protein Rab-5C
OS=Medicago truncatula GN=MTR_8g103550 PE=3 SV=1,71.82,0,Rab subfamily
of small GTPases,Small GTPase superfamily, Rab type; Ras subfamily of
RAS small GTPase,gene.g57989.t1.1
(139 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 174 2e-44
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 167 3e-42
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 137 2e-33
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 123 3e-29
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 92 8e-20
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 92 1e-19
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 92 1e-19
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 92 1e-19
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 91 3e-19
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 91 3e-19
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 90 4e-19
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 89 1e-18
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 88 2e-18
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 87 3e-18
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 87 3e-18
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 87 3e-18
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 87 4e-18
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 86 6e-18
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 86 6e-18
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 86 1e-17
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 84 2e-17
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 84 3e-17
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 84 4e-17
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 84 4e-17
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 83 5e-17
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 83 5e-17
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 83 6e-17
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 82 8e-17
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 82 9e-17
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 82 9e-17
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 82 1e-16
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 82 1e-16
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 82 1e-16
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 82 1e-16
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 81 2e-16
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 81 2e-16
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 81 2e-16
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 81 3e-16
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 80 3e-16
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 80 4e-16
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 80 4e-16
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 80 5e-16
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 79 9e-16
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 79 9e-16
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 79 9e-16
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 79 1e-15
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 78 1e-15
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 78 2e-15
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 77 3e-15
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 77 3e-15
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 77 3e-15
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 77 4e-15
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 77 4e-15
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 77 4e-15
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 76 6e-15
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 76 7e-15
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 75 1e-14
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 75 1e-14
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 75 1e-14
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 73 5e-14
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 73 7e-14
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 73 7e-14
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 72 2e-13
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 70 3e-13
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 70 5e-13
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 70 6e-13
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 69 1e-12
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 66 6e-12
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 65 2e-11
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 62 1e-10
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 59 8e-10
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 59 9e-10
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 59 1e-09
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 56 8e-09
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 56 8e-09
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 56 8e-09
AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 54 4e-08
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 52 1e-07
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 52 1e-07
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 52 1e-07
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 51 2e-07
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 49 9e-07
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 47 3e-06
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 47 3e-06
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 47 3e-06
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 47 3e-06
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 47 3e-06
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 47 3e-06
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 174 bits (440), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 43/182 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
+G GK+SLVLRFVK QF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH LAPM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA+AI+V+D+T+ D
Sbjct: 79 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDA 138
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ-TGIKLQSRPQERR-RMFC 137
+ YA+ENG+ F ETSAKTA NV E+FYEIA+RL + P+ TG+ L R +R C
Sbjct: 139 QTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSC 198
Query: 138 CA 139
CA
Sbjct: 199 CA 200
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 167 bits (422), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 111/182 (60%), Gaps = 43/182 (23%)
Query: 1 MGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPM 60
+G GK+SLVLRFVK QF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH LAPM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGAA+AI+V+DIT+ +
Sbjct: 79 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEA 138
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ-TGIKLQSRPQERR-RMFC 137
E YA+EN + F ETSAKTA NV ++FYEIAKRL + P+ TG+ L + P C
Sbjct: 139 EIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSC 198
Query: 138 CA 139
CA
Sbjct: 199 CA 200
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 137 bits (345), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 92/159 (57%), Gaps = 42/159 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 43 GVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPL 102
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGA A++VYDITS DG
Sbjct: 103 YYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDG 162
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
E A++NGM F ETSAKTA N+N+LF EI KRL + PS
Sbjct: 163 MELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPS 201
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 42/146 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEAT-VKFDIWDTAGQERYHCLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L ++T VKF+IWDTAGQERY LAP+
Sbjct: 43 GVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPL 102
Query: 61 YYRGAASAIVVYDITSM-----------------------------------------DG 79
YYRGA A++VYDITS DG
Sbjct: 103 YYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDG 162
Query: 80 EEYAKENGMTFFETSAKTAQNVNELF 105
E A++NGM F ETSAKTA N+N+LF
Sbjct: 163 MELAEKNGMFFIETSAKTADNINQLF 188
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 92.4 bits (228), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 41/154 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ +K IWDTAGQE + + Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGAA A++VYDIT + +GE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK 114
++AKE+G+ F E SAKTAQNV E F + A + K
Sbjct: 136 QFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYK 169
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 72/153 (47%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E GM FFETSAKT NV E+F+ IAK +
Sbjct: 145 QALADEYGMKFFETSAKTNLNVEEVFFSIAKDI 177
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 72/153 (47%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E GM FFETSAKT NV E+F+ IAK +
Sbjct: 145 QALADEYGMKFFETSAKTNLNVEEVFFSIAKDI 177
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 72/153 (47%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E GM FFETSAKT NV E+F+ IAK +
Sbjct: 145 QALADEYGMKFFETSAKTNLNVEEVFFSIAKDI 177
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 55/193 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +F+ +STIG F T+ L ++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + DG+
Sbjct: 83 YRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGK 142
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQT--------------GIKLQ 126
YA++ + F ETSA A NV + F E+ ++ + +Q I+++
Sbjct: 143 SYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVK 202
Query: 127 SRPQERRRMFCCA 139
+ +++ CC+
Sbjct: 203 NDVSALKKLGCCS 215
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 41/152 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ +K IWDTAGQE + + Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGAA A++VYDIT +G+
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDLAHKRAVSKEEGQ 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
++AKE+G+ F E SA+TAQNV E F E A ++
Sbjct: 136 QFAKEHGLLFLEASARTAQNVEEAFIETAAKI 167
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 72/153 (47%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E G+ FFETSAKT NV E+F+ IAK +
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIAKDI 177
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 85/192 (44%), Gaps = 56/192 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+L+F +F + TIG F + ++++ +K IWDTAGQE + + Y
Sbjct: 16 GVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAGQESFRSVTRSY 75
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRG A ++VYDIT + +GE
Sbjct: 76 YRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVSTEEGE 135
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK------ANPSRQTGI-------KLQS 127
++A+E+G+ F E SAKTA NV E F E A + K + + + GI K S
Sbjct: 136 QFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEANEPGITPGPFGGKDAS 195
Query: 128 RPQERRRMFCCA 139
Q+RR CC
Sbjct: 196 SSQQRRG--CCG 205
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++++ RF + +F +STIG F T+ L + TVK IWDTAGQERY + Y
Sbjct: 22 GVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++VYDIT DG
Sbjct: 82 YRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGR 141
Query: 81 EYAKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKAN------PSRQTGIKLQ 126
A++ G++F ETSA A N+ +E+++ I+K+ A P + T I +
Sbjct: 142 SLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQEAAGNLPGQGTAINIS 201
Query: 127 SRPQERRRMFCCA 139
R+ CC+
Sbjct: 202 DSSATNRKG-CCS 213
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 71/153 (46%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E G+ FFETSAKT NV E+F+ I + +
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIGRDI 177
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 71/153 (46%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E G+ FFETSAKT NV E+F+ I + +
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIGRDI 177
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 71/153 (46%), Gaps = 42/153 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF G F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+ A E G+ FFETSAKT NV E+F+ I + +
Sbjct: 145 QALADEYGIKFFETSAKTNLNVEEVFFSIGRDI 177
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +FS +STIG F T+ L++NE +K IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 41/148 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +F +STIG F T+ L + TVK IWDTAGQERY + Y
Sbjct: 22 GVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + D +
Sbjct: 82 YRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQ 141
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEI 108
YA++ G++F ETSA A NV + F I
Sbjct: 142 SYAEKEGLSFIETSALEALNVEKAFQTI 169
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 55/193 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +FS +STIG F T+ L++++ +K IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A++VYD+T + D +
Sbjct: 83 YRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAK 142
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAK-------------AN-PSRQTGIKLQ 126
+A++ + F ETSA A NV F E+ ++ AN PS+ I +
Sbjct: 143 SFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIG 202
Query: 127 SRPQERRRMFCCA 139
++ CC+
Sbjct: 203 KDVSAVKKGGCCS 215
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 67/145 (46%), Gaps = 41/145 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKT+++ RF + +F +STIG F T+ L + TVK IWDTAGQERY + Y
Sbjct: 22 GVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++VYDIT DG+
Sbjct: 82 YRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGQ 141
Query: 81 EYAKENGMTFFETSAKTAQNVNELF 105
A+ G++F ETSA A NV + F
Sbjct: 142 TLAETEGLSFLETSALEATNVEKAF 166
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 49/185 (26%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + YYR
Sbjct: 20 GKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYR 79
Query: 64 GAASAIVVYDITSMD-----------------------------------------GEEY 82
GA I+VYD T M+ G
Sbjct: 80 GAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRAL 139
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRLAK-----ANPSRQTG---IKLQSRPQERRR 134
A E G+ F ETSAK + NV + F IA + K N ++ +G ++++ +P ++
Sbjct: 140 ADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNN 199
Query: 135 MFCCA 139
CC
Sbjct: 200 GGCCG 204
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 45/158 (28%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK+ L+ RF + +FS ++TIG F T+ LS+ + ++K IWDTAGQERY + YYR
Sbjct: 29 GKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRAVTSAYYR 88
Query: 64 GAASAIVVYDIT-----------------------------------------SMDGEEY 82
GA A++VYD+T + D +E+
Sbjct: 89 GAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKEF 148
Query: 83 AKENGMTFFETSAKTAQNV----NELFYEIAKRLAKAN 116
A++ G+ F ETSA A NV N L +I + K N
Sbjct: 149 AEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F + TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITS------------------------------------------MDGEE 81
++ AIVVYD+++ +GE+
Sbjct: 81 DSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGED 140
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
KE G+ F ETSAK N+ LF +IA L
Sbjct: 141 KGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G
| chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +FS +STIG F T+ + ++E VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 41/148 (27%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++++ RF + +F +STIG F T+ + T+K IWDTAGQERY + Y
Sbjct: 22 GVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAY 81
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
YRGA A++VYDIT DG+
Sbjct: 82 YRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQ 141
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEI 108
A++ G++F ETSA A NV + F I
Sbjct: 142 SLAEKEGLSFLETSALEATNVEKAFQTI 169
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKT L+ RF + +FS ++TIG F T+ L ++ TVK IWDTAGQERY + YYR
Sbjct: 27 GKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQERYRAVTSAYYR 86
Query: 64 GAASAIVVYDIT-----------------------------------------SMDGEEY 82
GA A++VYD+T + D +E+
Sbjct: 87 GAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEF 146
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRL---------------AKANPS--RQTGIKL 125
A+ + F ETSA A NV F I + A N S + T I +
Sbjct: 147 AQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDADGNSSLLKGTRIII 206
Query: 126 QSRPQERRRMFCCA 139
S + +R CC
Sbjct: 207 PSEQESGKRGGCCG 220
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 48/185 (25%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 18 GVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 77
Query: 62 YRGAASAIVVYDITSMDG-----------EEYAKEN------------------------ 86
YRGA IV YD+T ++ + YA EN
Sbjct: 78 YRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAK 137
Query: 87 ------GMTFFETSAKTAQNVNELFY----EIAKRLAK--ANPSRQTGIKLQSRPQERRR 134
G+ F ETSAK A NV E F I R+A A S+ ++++ +P ++
Sbjct: 138 AFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPTVQIRGQPVNQQS 197
Query: 135 MFCCA 139
CC+
Sbjct: 198 G-CCS 201
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 49/186 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + E STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 18 GVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 77
Query: 62 YRGAASAIVVYDITSMDG-----------EEYAKEN------------------------ 86
YRGA I+VYD+T + + YA +N
Sbjct: 78 YRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAK 137
Query: 87 ------GMTFFETSAKTAQNVNELFY----EIAKRLAK---ANPSRQTGIKLQSRPQERR 133
G+ F ETSAK A NV + F I +R+A N +R ++++ +P ++
Sbjct: 138 AFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQK 197
Query: 134 RMFCCA 139
CC+
Sbjct: 198 NG-CCS 202
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + FS STIG F T+ + +++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F
| chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +FS +STIG F T+ + +++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 48/185 (25%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF + + STIG F + + + T+K IWDTAGQER+ + Y
Sbjct: 18 GVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSY 77
Query: 62 YRGAASAIVVYDITSMDG-----------EEYAKEN------------------------ 86
YRGA IV YD+T ++ + YA EN
Sbjct: 78 YRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAK 137
Query: 87 ------GMTFFETSAKTAQNVNELFY----EIAKRLAK--ANPSRQTGIKLQSRPQERRR 134
G+ F ETSAK A NV E F I R+A A ++ ++++ +P ++
Sbjct: 138 AFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPTVQIRGQPVNQQS 197
Query: 135 MFCCA 139
CC+
Sbjct: 198 G-CCS 201
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 48/169 (28%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y R
Sbjct: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
Query: 64 GAASAIVVYDITSM-----------------------------------------DGEEY 82
++ A++VYD+ + +G+
Sbjct: 81 DSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNK 140
Query: 83 AKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQE 131
A++ G+ F ETSAK N+ LF +++A A P +T L S QE
Sbjct: 141 ARDYGVIFIETSAKAGFNIKPLF----RKIAAALPGMET---LSSTKQE 182
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 46/171 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ A E G+ FFETSAKT QNV ++F IAK + + R T ++ PQ
Sbjct: 145 QALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQ----RLTESDTKAEPQ 191
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E
| chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + +FS +STIG F T+ + ++E +K +WDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYDIT
Sbjct: 83 YRGAVGALLVYDIT 96
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 42/159 (26%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK++L+ RF + +F ++TIG F TQ++ + VK IWDTAGQER+ + YY
Sbjct: 23 VGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRAVTSAYY 82
Query: 63 RGAASAIVVYDITSMD-----------------------------------------GEE 81
RGA A++VYDIT D G+
Sbjct: 83 RGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVSVEEGKA 142
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQ 120
A+E G+ F ETSA A NV++ F EI R N SR+
Sbjct: 143 LAEEEGLFFMETSALDATNVDKAF-EIVIREIFNNVSRK 180
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 55/193 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF K +F+ +STIG F T+ + VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT-----------------------------------------SMDGE 80
YRGA A+++YD+T + + +
Sbjct: 83 YRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAK 142
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKAN--------------PSRQTGIKLQ 126
+A+ + F ETSA A NV F E+ ++ K P + I ++
Sbjct: 143 AFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVK 202
Query: 127 SRPQERRRMFCCA 139
+RM CC+
Sbjct: 203 EDGSVLKRMGCCS 215
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 41/151 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y
Sbjct: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
Query: 63 RGAASAIVVYDITSM-----------------------------------------DGEE 81
R ++ A+VVYD+ + +G+
Sbjct: 80 RDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDS 139
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+E G+ F ETSAK N+ LF +IA L
Sbjct: 140 KGREYGVMFIETSAKAGFNIKPLFRKIAAAL 170
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 54/188 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS+ ++TIGA F T+ L +++ V IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM------------------------------------DG------ 79
YRGA ++VYD+ + DG
Sbjct: 78 YRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVV 137
Query: 80 -----EEYAKENG-MTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQ----SRP 129
E+ E G + +FETSAK NV++ F I K LA AN R I Q S P
Sbjct: 138 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITK-LALAN-ERDQDIYFQPDTGSVP 195
Query: 130 QERRRMFC 137
++R C
Sbjct: 196 EQRGGCAC 203
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 49/168 (29%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK+ L+ RF + +FS ++TIG F T+ L ++ T+K IWDTAGQERY + YYR
Sbjct: 27 GKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQERYRAVTSAYYR 86
Query: 64 GAASAIVVYDIT-----------------------------------------SMDGEEY 82
GA A++VYDIT + D +E+
Sbjct: 87 GAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEF 146
Query: 83 AKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKANPSRQTG 122
A+ + F ETSA + NV E++ ++K+ AN ++G
Sbjct: 147 AQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESG 194
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 48/170 (28%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKTS++ RF+ +F ++TIG F ++ + L + TV+ +WDTAGQER+ L P Y
Sbjct: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
Query: 63 RGAASAIVVYDITSM-----------------------------------------DGEE 81
R ++ A++VYD+ S + E
Sbjct: 80 RDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEA 139
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQE 131
A+E + F ETSAK N+ LF +++A A P +T L S QE
Sbjct: 140 KARELNVMFIETSAKAGFNIKALF----RKIAAALPGMET---LSSTKQE 182
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 61/197 (30%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK+ ++ R+ + +FS ++TIG F T+ L ++ +VK IWDTAGQERY + YY
Sbjct: 28 VGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRAVTSAYY 87
Query: 63 RGAASAIVVYDIT-----------------------------------------SMDGEE 81
RGA A++VYDIT + D +E
Sbjct: 88 RGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKE 147
Query: 82 YAKENGMTFFETSAKTAQNV--------NELFYEIAKRLAKA-------NPSRQTGIKLQ 126
+A++ G+ F ETSA A NV E+F + K+ A NP G K+
Sbjct: 148 FAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENGNPGSLAGKKID 207
Query: 127 SRPQ-----ERRRMFCC 138
P + CC
Sbjct: 208 IVPGPGQVIPNKSNMCC 224
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I
| chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK++L+ RF + FS +TIG F T+ + ++ VK IWDTAGQERY + Y
Sbjct: 23 GVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQERYRAITSAY 82
Query: 62 YRGAASAIVVYDIT 75
YRGA A++VYD+T
Sbjct: 83 YRGAVGALLVYDVT 96
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 70/160 (43%), Gaps = 45/160 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F + TIG F + L++ E +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYDITSMD------------------------------------------- 78
YRGA I+VYD+T D
Sbjct: 82 YRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
G ++A+E G F E SAKT NV + F E+ ++ + PS
Sbjct: 142 GIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET-PS 180
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 70/160 (43%), Gaps = 45/160 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F + TIG F + L++ E +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYDITSMD------------------------------------------- 78
YRGA I+VYD+T D
Sbjct: 82 YRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
G ++A+E G F E SAKT NV + F E+ ++ + PS
Sbjct: 142 GIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET-PS 180
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 70/160 (43%), Gaps = 45/160 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL+L F F + TIG F + L++ E +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYDITSMD------------------------------------------- 78
YRGA I+VYD+T D
Sbjct: 82 YRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
G ++A+E G F E SAKT NV + F E+ ++ + PS
Sbjct: 142 GIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET-PS 180
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 76/171 (44%), Gaps = 46/171 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+ L+LRF F+ +TIG F + + L+ +K IWDTAGQER+ + Y
Sbjct: 25 GVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAY 84
Query: 62 YRGAASAIVVYDIT--------------------------------SMD----------G 79
YRGA ++VYD+T MD G
Sbjct: 85 YRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKG 144
Query: 80 EEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
+ A E G+ FFETSAKT NV +F IAK + + R T ++ PQ
Sbjct: 145 QALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQ----RLTETDTKAEPQ 191
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase
homolog 7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +F++ ++TIGA F T+ L ++E +V IWDTAGQER+ L +
Sbjct: 19 GVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQSLGAAF 78
Query: 62 YRGAASAIVVYDITSM 77
YRGA ++VYD+ ++
Sbjct: 79 YRGADCCVLVYDVNNL 94
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK++L+ R+ + +FS ++TIG F TQ + + VK IWDTAGQER+ + YYR
Sbjct: 67 GKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYR 126
Query: 64 GAASAIVVYDIT 75
GA A+VVYDIT
Sbjct: 127 GAVGALVVYDIT 138
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 79/177 (44%), Gaps = 50/177 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ L + E V IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAF 77
Query: 62 YRGAASAIVVYDIT---SMDG-----EEYAKE---------------------------- 85
YRGA +VYD+ S D EE+ K+
Sbjct: 78 YRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVV 137
Query: 86 -----------NG-MTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
NG + +FETSAK NV+E F IAK A AN Q I Q P
Sbjct: 138 SDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKT-ALANEHEQD-IYFQGIPD 192
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 48/162 (29%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM--------------------DGEEY------------------- 82
YRGA ++VYD+ SM D E +
Sbjct: 78 YRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVV 137
Query: 83 ---------AKENGMTFFETSAKTAQNVNELFYEIAKRLAKA 115
A + + +FETSAK NV E F IAK K+
Sbjct: 138 SEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKS 179
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 46/73 (63%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L+ RF +F +STIG F T+ ++L VK IWDTAGQERY + YY
Sbjct: 39 VGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQERYRAVTSAYY 98
Query: 63 RGAASAIVVYDIT 75
RGA A+VVYDIT
Sbjct: 99 RGALGAMVVYDIT 111
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 41/152 (26%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTS++ F+ G+F ++TIG F ++ + T + +WDTAGQER+ L P Y
Sbjct: 17 GVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQERFKSLVPSY 76
Query: 62 YRGAASAIVVYDITSM-----------------------------------------DGE 80
R ++ A++VYD+ S +GE
Sbjct: 77 IRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKRQVSIEEGE 136
Query: 81 EYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
A+E G F ETSAK N+ LF +I L
Sbjct: 137 NKAREFGALFMETSAKAGFNIKPLFCKITSAL 168
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A
| chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK++L+ RF + +F +STIG F TQ + +N +K IWDTAGQER+ + YY
Sbjct: 25 VGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRAVTSAYY 84
Query: 63 RGAASAIVVYDIT 75
RGA A++VYDI+
Sbjct: 85 RGAVGALLVYDIS 97
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK++L+ R+ + +F+ ++TIG F TQ + ++ VK IWDTAGQER+ + YYR
Sbjct: 24 GKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYR 83
Query: 64 GAASAIVVYDIT 75
GA A+VVYDIT
Sbjct: 84 GAVGALVVYDIT 95
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D
| chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 4 GKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYR 63
GK++L+ R+ + +F+ + ++TIG F TQ + + VK IWDTAGQER+ + YYR
Sbjct: 24 GKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQERFRAVTSAYYR 83
Query: 64 GAASAIVVYDIT 75
GA A+VVYDI+
Sbjct: 84 GAVGALVVYDIS 95
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D
| chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ +FV +FS ++TIGA F T+ + +++ IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM 77
YRGA ++VYD+ M
Sbjct: 78 YRGADCCVLVYDVNVM 93
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 48/168 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ +FV +FS ++TIGA F T+ + +++ IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITSM--------------------DGEEY------------------- 82
YRGA ++V D+ M D E +
Sbjct: 78 YRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGKSRVV 137
Query: 83 ---------AKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPSRQT 121
A + + +FETSAK NV+ F IAK K P +
Sbjct: 138 TEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNEPEEEV 185
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ L + E V IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAF 77
Query: 62 YRGAASAIVVYDITSMDGEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
YRGA +VYD+ + + +N T+ E K A N+ +A+A+PS
Sbjct: 78 YRGADCCALVYDVNVL----RSFDNLETWHEEFLKQAWNIGMW------TIAEASPS 124
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 79/182 (43%), Gaps = 55/182 (30%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ L + E V IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAF 77
Query: 62 YRGAASAIVVYDIT---SMDG-----EEYAKE---------------------------- 85
YRGA +VYD+ S D EE+ K+
Sbjct: 78 YRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMCPSDPKTFPFIVLGNKIDVDGG 137
Query: 86 ----------------NG-MTFFETSAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSR 128
NG + +FETSAK NV+E F IAK A AN Q I Q
Sbjct: 138 SSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKT-ALANEHEQD-IYFQGI 195
Query: 129 PQ 130
P
Sbjct: 196 PD 197
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 41/151 (27%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK++L+ RF + +F + TIG F + + + + T+K IWDTAGQER+ + YY
Sbjct: 24 VGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRAITSSYY 83
Query: 63 RGAASAIVVYDIT-----------------------------------------SMDGEE 81
RGA A+++YDIT +G+
Sbjct: 84 RGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVEEEEGKT 143
Query: 82 YAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
A+ G+ F ETSA QNV E F + R+
Sbjct: 144 LAESEGLYFLETSALENQNVEEAFLSMIGRI 174
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD
LENGTH=206
Length = 206
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITS 76
YRGA ++VYD+ S
Sbjct: 78 YRGADCCVLVYDVNS 92
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD
LENGTH=206
Length = 206
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +FS ++TIGA F T+ + + IWDTAGQER+ L +
Sbjct: 18 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAF 77
Query: 62 YRGAASAIVVYDITS 76
YRGA ++VYD+ S
Sbjct: 78 YRGADCCVLVYDVNS 92
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 45/160 (28%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GK+SL++ F+ + TIG F + L++ +K IWDTAGQER+ L Y
Sbjct: 23 GVGKSSLLVSFISSSVEDLA-PTIGVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSY 81
Query: 62 YRGAASAIVVYDITSM-------------------------------------------D 78
YRGA I+VYD+T +
Sbjct: 82 YRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRESERGVSREE 141
Query: 79 GEEYAKENGMTFFETSAKTAQNVNELFYEIAKRLAKANPS 118
G AKE F E SA+T QNV + F E+A ++ + PS
Sbjct: 142 GIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV-PS 180
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 41/121 (33%)
Query: 33 VLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDITSM--------------- 77
+++++ +K IWDTAGQE + + YYRGAA A++VYDIT
Sbjct: 1 MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
Query: 78 --------------------------DGEEYAKENGMTFFETSAKTAQNVNELFYEIAKR 111
+G+++AKE+G+ F E SA+TAQNV E F E A +
Sbjct: 61 HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120
Query: 112 L 112
+
Sbjct: 121 I 121
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 48/159 (30%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIW-------DTAGQERY 54
G GKTS++ F+ G+F ++TIG F ++ + T + +W DTAGQER+
Sbjct: 17 GVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLGDTAGQERF 76
Query: 55 HCLAPMYYRGAASAIVVYDITSM------------------------------------- 77
L P Y R ++ A++VYD+ S
Sbjct: 77 KSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKRQ 136
Query: 78 ----DGEEYAKENGMTFFETSAKTAQNVNELFYEIAKRL 112
+GE A+E G F ETSAK N+ LF +I L
Sbjct: 137 VSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSAL 175
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 67/158 (42%), Gaps = 48/158 (30%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ R+ F + STI T+ + + E V IWDTAGQER+ L +
Sbjct: 15 GVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQERFKSLPSRF 74
Query: 62 YRGAASAIVVYDIT------SMDG--EEYAKE---------------------NG----- 87
YR ++VYD+ S+D +E+ K+ NG
Sbjct: 75 YRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDVNNGKPRVV 134
Query: 88 --------------MTFFETSAKTAQNVNELFYEIAKR 111
+ +FETSAK NV E F EIAK+
Sbjct: 135 AKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKK 172
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A
| chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GK++L+ RF K +F + TIG F + + + + +K IWDTAGQER+ + YY
Sbjct: 24 VGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRAITSSYY 83
Query: 63 RGAASAIVVYDIT 75
RGA A+++YDIT
Sbjct: 84 RGALGALLIYDIT 96
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 46/144 (31%)
Query: 29 FFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDIT------------- 75
F + + L+ +K IWDTAGQER+ + YYRGA ++VYD+T
Sbjct: 42 FKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMK 101
Query: 76 -------------------SMD----------GEEYAKENGMTFFETSAKTAQNVNELFY 106
MD G+ A E G+ FFETSAKT NV +F
Sbjct: 102 NIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFM 161
Query: 107 EIAKRLAKANPSRQTGIKLQSRPQ 130
IAK + + R T ++ PQ
Sbjct: 162 SIAKDIKQ----RLTETDTKAEPQ 181
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein
4 | chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ + R + G+F E T+G + N ++F+ WDTAGQE+Y L Y
Sbjct: 23 GTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 66/157 (42%), Gaps = 50/157 (31%)
Query: 22 ESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDIT---SMD 78
++TIGA F T+ L + E V IWDTAGQER+ L +YRGA +VYD+ S D
Sbjct: 4 KATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFD 63
Query: 79 G-----EEYAKE---------------------------------------NG-MTFFET 93
EE+ K+ NG + +FET
Sbjct: 64 NLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFET 123
Query: 94 SAKTAQNVNELFYEIAKRLAKANPSRQTGIKLQSRPQ 130
SAK NV+E F IAK A AN Q I Q P
Sbjct: 124 SAKDDFNVDEAFLTIAKT-ALANEHEQD-IYFQGIPD 158
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GTGKT+ V R + G+F + E TIG N ++F WDTAGQE++ L Y
Sbjct: 23 GTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGY 82
Query: 62 YRGAASAIVVYDITS 76
Y AI+++D+T+
Sbjct: 83 YIHGQCAIIMFDVTA 97
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 45/161 (27%)
Query: 24 TIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDIT-------- 75
TIG F + + + +K IWDTAGQE++ L Y+RG+ I+VYD+T
Sbjct: 44 TIGVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNL 103
Query: 76 ------------------------SMDGE---EYAKENGMT--------FFETSAKTAQN 100
+D E + ++E GM F E SA+T +N
Sbjct: 104 ADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTREN 163
Query: 101 VNELFYEIAKRLAKANPSRQTG-IKLQSRPQER-RRMFCCA 139
VN F E+A ++ + + G ++ +P R + CC+
Sbjct: 164 VNGCFEELALKIMEVPSLLEEGSSSVKRKPDYRAHQGRCCS 204
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 45/161 (27%)
Query: 24 TIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDIT-------- 75
TIG F + + + +K IWDTAGQE++ L Y+RG+ I+VYD+T
Sbjct: 44 TIGVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNL 103
Query: 76 ------------------------SMDGE---EYAKENGMT--------FFETSAKTAQN 100
+D E + ++E GM F E SA+T +N
Sbjct: 104 ADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTREN 163
Query: 101 VNELFYEIAKRLAKANPSRQTG-IKLQSRPQER-RRMFCCA 139
VN F E+A ++ + + G ++ +P R + CC+
Sbjct: 164 VNGCFEELALKIMEVPSLLEEGSSSVKRKPDYRAHQGRCCS 204
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 45/161 (27%)
Query: 24 TIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYYRGAASAIVVYDIT-------- 75
TIG F + + + +K IWDTAGQE++ L Y+RG+ I+VYD+T
Sbjct: 44 TIGVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNL 103
Query: 76 ------------------------SMDGE---EYAKENGMT--------FFETSAKTAQN 100
+D E + ++E GM F E SA+T +N
Sbjct: 104 ADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTREN 163
Query: 101 VNELFYEIAKRLAKANPSRQTG-IKLQSRPQER-RRMFCCA 139
VN F E+A ++ + + G ++ +P R + CC+
Sbjct: 164 VNGCFEELALKIMEVPSLLEEGSSSVKRKPDYRAHQGRCCS 204
>AT2G21880.2 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase
homolog 7A | chr2:9324899-9326170 REVERSE LENGTH=204
Length = 204
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
G GKTSL+ ++V +F++ ++TIGA F T+ L ++E +V +R+ L +
Sbjct: 19 GVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTL--------QRFQSLGAAF 70
Query: 62 YRGAASAIVVYDITSM 77
YRGA ++VYD+ ++
Sbjct: 71 YRGADCCVLVYDVNNL 86
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ +N ATV +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 76 RGADVFILAFSLIS 89
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ +N ATV +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 76 RGADVFILAFSLIS 89
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ +N ATV +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 76 RGADVFILAFSLIS 89
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ +N +TV +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 76 RGADVFILAFSLIS 89
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT L++ + F T+ F VL ++ TV +WDTAGQE Y+ + P+
Sbjct: 28 AVGKTCLLISYTSNTFPTDYVPTVFDNFNANVL-VDGKTVNLGLWDTAGQEDYNRVRPLS 86
Query: 62 YRGAASAIVVYDITS 76
YRGA I+ + + S
Sbjct: 87 YRGADVFILAFSLIS 101
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT +++ + F T+ F V+ ++ TV +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 76 RGADVFILAFSLIS 89
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 |
RAC-like 2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 GTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMY 61
GKT +++ + F T+ F V+ ++ +TV +WDTAGQE Y+ L P+
Sbjct: 16 AVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLS 74
Query: 62 YRGAASAIVVYDITS 76
YRGA ++ + + S
Sbjct: 75 YRGADVFLLAFSLIS 89
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT +++ + F T+ F V+ ++ TV +WDTAGQE Y+ L P+ Y
Sbjct: 16 VGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSY 74
Query: 63 RGAASAIVVYDITS 76
RGA I+ + + S
Sbjct: 75 RGADVFILAFSLIS 88
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ ++ T+ +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA ++ + + S
Sbjct: 76 RGADVFLLAFSLVS 89
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ ++ T+ +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA ++ + + S
Sbjct: 76 RGADVFLLAFSLVS 89
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 |
RAC-like 3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 3 TGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHCLAPMYY 62
GKT L++ + F T+ F V+ ++ T+ +WDTAGQE Y+ L P+ Y
Sbjct: 17 VGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWDTAGQEDYNRLRPLSY 75
Query: 63 RGAASAIVVYDITS 76
RGA ++ + + S
Sbjct: 76 RGADVFLLAFSLVS 89