Miyakogusa Predicted Gene
- Lj4g3v3061490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3061490.1 Non Chatacterized Hit- tr|J3M0R8|J3M0R8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,59.15,2e-18,U-box,U box domain; RING/U-box,NULL; seg,NULL;
no description,Zinc finger, RING/FYVE/PHD-type; PROTE,CUFF.52218.1
(563 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 80 4e-15
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 79 8e-15
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 78 1e-14
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 77 3e-14
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 77 3e-14
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 75 1e-13
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 74 2e-13
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 74 2e-13
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 74 2e-13
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 74 2e-13
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 74 3e-13
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 74 3e-13
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 73 6e-13
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 73 7e-13
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 72 8e-13
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 72 8e-13
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 71 2e-12
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 70 3e-12
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 70 4e-12
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 70 4e-12
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 70 5e-12
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 69 7e-12
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 69 7e-12
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 69 8e-12
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 69 8e-12
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 69 9e-12
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 69 9e-12
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 69 1e-11
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 68 1e-11
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 68 2e-11
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 68 2e-11
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 68 2e-11
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 68 2e-11
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 67 3e-11
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 67 4e-11
AT3G06880.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 2e-10
AT3G06880.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 2e-10
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 64 3e-10
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 64 4e-10
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 63 5e-10
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 60 3e-09
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 59 7e-09
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 58 2e-08
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 57 4e-08
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 56 8e-08
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 55 1e-07
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 55 1e-07
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 55 2e-07
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 54 3e-07
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 5e-07
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-06
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 52 2e-06
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 51 2e-06
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 50 3e-06
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 50 3e-06
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 50 6e-06
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
+F+CPIT I DPV + TGQT+E+++I++WF+ G+ TCP TRQ+L + L N+ LK
Sbjct: 293 EFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLA-PNFALKN 351
Query: 190 LIASWKERNPNSVP 203
LI W E+N +P
Sbjct: 352 LIMQWCEKNNFKIP 365
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF+CP++ + DPV + TGQT+ER I+ W + GN+TCP T+QKL+N L NYVL+
Sbjct: 244 DFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP-NYVLRS 302
Query: 190 LIASW 194
LI+ W
Sbjct: 303 LISRW 307
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CPI+ + DPV + +GQT+ER IE+W G+ TCP T+Q L +T L NYVL+
Sbjct: 259 DFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTL-TPNYVLRS 317
Query: 190 LIASWKERNPNSVPPP 205
LIA W E N P P
Sbjct: 318 LIAQWCEANDIEPPKP 333
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF+CPI+ + DP + TGQT+ER I+ W + GN++CP T+QKL+N L NYVL+
Sbjct: 98 DFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLT-PNYVLRS 156
Query: 190 LIASW 194
LI+ W
Sbjct: 157 LISQW 161
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF+CPI+ + DP + TGQT+ER I+ W + GN++CP T+QKL+N L NYVL+
Sbjct: 246 DFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLT-PNYVLRS 304
Query: 190 LIASW 194
LI+ W
Sbjct: 305 LISQW 309
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 133 CPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRLIA 192
CPI+ + DPV + +GQT+ER IE+WF+ G+ +CP T+Q+L + L NY +K LIA
Sbjct: 281 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSL-TPNYCVKGLIA 339
Query: 193 SWKERNPNSVP--PP 205
SW E+N +VP PP
Sbjct: 340 SWCEQNGITVPTGPP 354
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 133 CPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRLIA 192
CPI+ + DPV + +GQT+ER IE+WF+ G+ TCP T Q+L + L NY +K LI+
Sbjct: 285 CPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCL-TPNYCVKALIS 343
Query: 193 SWKERNPNSVP--PP 205
SW E+N VP PP
Sbjct: 344 SWCEQNGVQVPDGPP 358
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 133 CPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRLIA 192
CPI+ + DPV + +GQT+ER IE+WF+ G+ TCP T+Q+L + L N V K LIA
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV-KGLIA 336
Query: 193 SWKERNPNSVP--PP 205
SW E+N +P PP
Sbjct: 337 SWCEQNGTQIPSGPP 351
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 133 CPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRLIA 192
CPI+ + DPV + +GQT+ER IE+WF+ G+ TCP T+Q+L + L N V K LIA
Sbjct: 278 CPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV-KGLIA 336
Query: 193 SWKERNPNSVP--PP 205
SW E+N +P PP
Sbjct: 337 SWCEQNGTQIPSGPP 351
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWF----NRGNITCPITRQKLQNTQLPKTNYV 186
F+CP+T I +DPVT ETG T ER+A+ EWF N I CP+T QKL T+L N V
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTEL-SANVV 307
Query: 187 LKRLIASWKERN 198
LK +I WK RN
Sbjct: 308 LKTIIQEWKVRN 319
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWF----NRGNITCPITRQKLQNTQLPKTNYV 186
F+CP+T I +DPVT ETG T ER+A+ EWF N I CP+T QKL T+L N V
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTEL-SANVV 307
Query: 187 LKRLIASWKERN 198
LK +I WK RN
Sbjct: 308 LKTIIQEWKVRN 319
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWF----NRGNITCPITRQKLQNTQLPKTNYV 186
F+CP+T I +DPVT ETG T ER+A+ EWF N I CP+T QKL T+L N V
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTEL-SANVV 307
Query: 187 LKRLIASWKERN 198
LK +I WK RN
Sbjct: 308 LKTIIQEWKVRN 319
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CP++ + DPV + +GQT+E+ I+ W + G CP TRQ L +T L NY +K
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL-IPNYTVKA 294
Query: 190 LIASWKERNPNSVPPPCES----------SCEDS 213
LIA+W E N +P P +S SC DS
Sbjct: 295 LIANWCETNDVKLPDPNKSTSLNELSPLLSCTDS 328
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CP++ + DPV + +GQT+E+ I+ W + G CP TRQ L +T L NY +K
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL-IPNYTVKA 291
Query: 190 LIASWKERNPNSVPPPCES----------SCEDS 213
LIA+W E N +P P +S SC DS
Sbjct: 292 LIANWCETNDVKLPDPNKSTSLNELSPLLSCTDS 325
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQN-TQLPKTNYVLKR 189
F CPI+ ++ DPVT+ TGQT++R +I+ W GN TCP+TR L + T +P N+ L+R
Sbjct: 18 FRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIP--NHTLRR 75
Query: 190 LIASW 194
LI W
Sbjct: 76 LIQEW 80
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CPI+ + DPV + TGQT+ER +I++W + G+ TCP +++ L + L NYVLK L
Sbjct: 252 FRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTP-NYVLKSL 310
Query: 191 IASWKERNPNSVPPPCESSC 210
IA W E N +P + SC
Sbjct: 311 IALWCESNGIELPQN-QGSC 329
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
+F CPI+ + DPV + +GQT+ER+ I++W G++TCP T++ L + + NYVL+
Sbjct: 259 EFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETL-TSDIMTPNYVLRS 317
Query: 190 LIASWKERNPNSVPPP 205
LIA W E N + PP
Sbjct: 318 LIAQWCE--SNGIEPP 331
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNI-TCPITRQKLQNTQLPKTNYVLKR 189
F+CPI+ +I DPV + TG T++R++IE+W G +CP+T+Q + T L N+ L+R
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL-TPNHTLRR 69
Query: 190 LIASWK--------ERNPNSVPPPCESSCE 211
LI SW ER P PP C+S E
Sbjct: 70 LIQSWCTLNASYGIERIPTPKPPICKSEIE 99
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWF-----NRGNITCPITRQKLQNTQLPKTNY 185
F+CP+T + +PVTLE GQTFER+AIE+WF N ++CPIT ++L T L +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS-I 87
Query: 186 VLKRLIASWKERN 198
L+ I W+ RN
Sbjct: 88 ALRNTIEEWRARN 100
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWF-----NRGNITCPITRQKLQNTQLPKTNY 185
F+CP+T + +PVTLE GQTFER+AIE+WF N ++CPIT ++L T L +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS-I 87
Query: 186 VLKRLIASWKERN 198
L+ I W+ RN
Sbjct: 88 ALRNTIEEWRARN 100
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF C ++ + DPV + +GQTFER I++W + G + CP TRQ L +T L N++++
Sbjct: 243 DFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTL-TPNFIVRA 301
Query: 190 LIASWKERNPNSVPPPCE 207
+ASW E N P P E
Sbjct: 302 FLASWCETNNVYPPDPLE 319
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNI-TCPITRQKLQNTQLPKTNYVLKR 189
F+CPI+ I DPV + TG T++R +IE+W G +CP+T+Q + + L N+ L+R
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL-TPNHTLRR 74
Query: 190 LIASW--------KERNPNSVPPPCESSCE----DSADAE 217
LI SW ER P PP C+S E DSA +
Sbjct: 75 LIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSH 114
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
D CPI+ I DPV LE+G T++R +I +WF GNITCP T + L +T L N+ +K+
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVD-NFSVKQ 339
Query: 190 LIASWKERN 198
+I S+ ++N
Sbjct: 340 VIQSYSKQN 348
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKL-QNTQLPKTNYVLKR 189
F+CPI+ DPVTL TGQT+ER I +WFN G++TCP T Q+L +T P N L
Sbjct: 68 FICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP--NKTLHH 125
Query: 190 LIASW 194
LI +W
Sbjct: 126 LIYTW 130
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CP+++ + DPV + +GQTF+R +I++W + G CP TRQ L + +L NY +K +
Sbjct: 206 FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELI-PNYTVKAM 264
Query: 191 IASWKERNPNSVPPPCESSCE--DSADAETVV 220
IASW E N ++ +SC D DA ++
Sbjct: 265 IASWLEANRINLAT---NSCHQYDGGDASSMA 293
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQL 180
D +CPI+ I DPV +ETG T++R +I +WF GNITCPIT + L +T+L
Sbjct: 291 DLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTEL 341
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CP+++ + DPV + +GQTF+R +I++W + G CP TRQ L + +L NY +K +
Sbjct: 242 FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP-NYTVKAM 300
Query: 191 IASWKERNPNSVPPPCESSCE--DSADAETV 219
IASW E N ++ +SC D DA ++
Sbjct: 301 IASWLEANRINLAT---NSCHQYDGGDASSM 328
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 27/241 (11%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRG-NITCPITRQKLQN-TQLPKTNYVLK 188
F CPI+ + DPVT+ TGQT++R +IE W + G N TCP+TR L + T +P N+ L+
Sbjct: 18 FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIP--NHTLR 75
Query: 189 RLIASWKERNPNS----VPPPCESSCEDSADAETVVKTTTMPSTSPNSVITQATV----- 239
RLI W N ++ +P P + + D ++ + + + SV ++A
Sbjct: 76 RLIQEWCVANRSNGVERIPTPKQPA--DPTSVRALLSQASAITGTHVSVRSRAAALRRLR 133
Query: 240 ----DGMINELRYAINN---LYMSEILEESEKAVLQIEKLWRGVNLGV----DIHSMLSK 288
D N + A +N + + + E+ + L E L V L + S+ S
Sbjct: 134 GFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSD 193
Query: 289 PPIINGFVEILFN-SVEPQVLQAAVFLLAEMGSRDNAVIQTLTRVDTDVEGIVALFKKGL 347
P + +LF+ S+E +V AA+ + G++ + +++ ++ EG++ L + +
Sbjct: 194 PGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPI 253
Query: 348 T 348
+
Sbjct: 254 S 254
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNI-----TCPITRQKLQNTQLPKTNY 185
F+CP+T + DPVTLE G+TFER+AIE+WF +CP+T Q+L +T + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDV-SASI 85
Query: 186 VLKRLIASWKERN 198
L+ I W+ RN
Sbjct: 86 ALRNTIEEWRSRN 98
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CPI+ I DPV L++G TF+R +I++W + GN TCPIT+ L T N+ L+
Sbjct: 8 DFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALRS 67
Query: 190 LIASW 194
LI ++
Sbjct: 68 LILNF 72
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CPI+ DPVTL TGQT+ER I +WFN G+ TCP T Q+L + L N L +L
Sbjct: 64 FICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWD-DLVTPNKTLHQL 122
Query: 191 IASW 194
I +W
Sbjct: 123 IYTW 126
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CPIT + DPV + TGQT++R++I+ W G+ TCP T Q L++T L N LK
Sbjct: 277 DFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVP-NRALKN 335
Query: 190 LIASW--KERNP-------NSVPPPCESSCE 211
LI W ++ P P PC+ + E
Sbjct: 336 LIVLWCRDQKIPFELYGDGGGEPAPCKEAVE 366
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DFVCPI+ ++ DPV + TGQT++R +I W G+ TCP T Q L ++++ N LK
Sbjct: 308 DFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP-NRALKN 366
Query: 190 LIASW 194
LI W
Sbjct: 367 LIVQW 371
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CPI+ ++ PV+L TG T++R +I+ W + GN TCP T Q LQN + N L RL
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVP-NLTLHRL 73
Query: 191 IASWKE---RNPNSVPPPCESSCEDSADA 216
I W + R +S P ++ D +A
Sbjct: 74 IDHWSDSINRRADSESPESDTPTRDEINA 102
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 67 STSDSEAENEEKDKNMALLK-----------PRRSQS---QEQMQTVFKESRGSPDSPMA 112
STS S + +E KD + A LK RRS ++ Q F + DS A
Sbjct: 145 STSSSASPDEIKDFHYAALKLQLSTPEAIVTERRSLKIICEDHKQNSFTHHQSIDDSLHA 204
Query: 113 DYDXXXXXXXXXXXXXXDFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITR 172
+ F C ++ + DPV + +G TFER I++WF+ GN +CPI++
Sbjct: 205 NAAEAEASEEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISK 264
Query: 173 QKLQNTQLPKTNYVLKRLIASWKERNPNSVPPP 205
+KL + L K N LK I+ W +N V P
Sbjct: 265 RKLDDFTL-KPNVELKSQISEWCAKNGLDVQDP 296
>AT3G06880.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:2170516-2175686 REVERSE LENGTH=1264
Length = 1264
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 134/305 (43%), Gaps = 14/305 (4%)
Query: 263 EKAVLQIEKLWRGVNLGVDIHSMLSKPPIINGFVEILFNSVEPQVLQAAVFLLAEMGSRD 322
EK V ++ +++ +N + K I++ + +S E V++A++ L ++ S +
Sbjct: 458 EKYVSEVTMIYQMLNRKEGFKYSMLKDVILDQLFTAISSSEEKTVIKASMTALTKIISVN 517
Query: 323 NAVIQTLTRVDTDVEGIVALFKKGLTEAVVLLYLLNPSDVSLTEMNMVESLISVFSEKEE 382
++ + R ++ + K+ + EA +L+YL+ PS + + ++ +L+ V +
Sbjct: 518 RTALEEVKRKGLNLSHLANALKQNVQEAAILIYLIKPSPTEIKSLELLPALVDVVASTSS 577
Query: 383 DLVKMC---------LKPKTAAVLLLAHITGSSEEIIASSAVKTLFSEKAIGTIVGSLGA 433
C L P A+++++ + + + + + + S + ++ +
Sbjct: 578 --SSSCYTFIPSPSYLTPPAASLMIIEVLITAFDHATNTMHLAAISSPSVLCGLLDVAKS 635
Query: 434 EWGEERIAAVEILLRCMQEDGTCRNTIADKVELSPILESFISANDGERFKIVTFFSELVK 493
E I+ IL++CMQ DG R I ++P S + E + F E++K
Sbjct: 636 GNSGEFISLTSILVKCMQFDGLHRKYIYQHTRVAPFAHLLQSKDQEEICIALQFLHEVLK 695
Query: 494 LNRRTFIEQILHIIKEEGLFSTMHILLIHLQTALQDQCPVMAGXXXXXXXXXE-PRKMSI 552
+ R + I +IL IK+EG F + + L+H LQ + A + P +
Sbjct: 696 IPRSSAI-KILQQIKKEGSFD-IKVTLLHCIKHLQGDHKLFAADILLQLNALDSPPENKK 753
Query: 553 YREEA 557
YR EA
Sbjct: 754 YRNEA 758
>AT3G06880.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:2169899-2175686 REVERSE LENGTH=1261
Length = 1261
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 134/305 (43%), Gaps = 14/305 (4%)
Query: 263 EKAVLQIEKLWRGVNLGVDIHSMLSKPPIINGFVEILFNSVEPQVLQAAVFLLAEMGSRD 322
EK V ++ +++ +N + K I++ + +S E V++A++ L ++ S +
Sbjct: 458 EKYVSEVTMIYQMLNRKEGFKYSMLKDVILDQLFTAISSSEEKTVIKASMTALTKIISVN 517
Query: 323 NAVIQTLTRVDTDVEGIVALFKKGLTEAVVLLYLLNPSDVSLTEMNMVESLISVFSEKEE 382
++ + R ++ + K+ + EA +L+YL+ PS + + ++ +L+ V +
Sbjct: 518 RTALEEVKRKGLNLSHLANALKQNVQEAAILIYLIKPSPTEIKSLELLPALVDVVASTSS 577
Query: 383 DLVKMC---------LKPKTAAVLLLAHITGSSEEIIASSAVKTLFSEKAIGTIVGSLGA 433
C L P A+++++ + + + + + + S + ++ +
Sbjct: 578 --SSSCYTFIPSPSYLTPPAASLMIIEVLITAFDHATNTMHLAAISSPSVLCGLLDVAKS 635
Query: 434 EWGEERIAAVEILLRCMQEDGTCRNTIADKVELSPILESFISANDGERFKIVTFFSELVK 493
E I+ IL++CMQ DG R I ++P S + E + F E++K
Sbjct: 636 GNSGEFISLTSILVKCMQFDGLHRKYIYQHTRVAPFAHLLQSKDQEEICIALQFLHEVLK 695
Query: 494 LNRRTFIEQILHIIKEEGLFSTMHILLIHLQTALQDQCPVMAGXXXXXXXXXE-PRKMSI 552
+ R + I +IL IK+EG F + + L+H LQ + A + P +
Sbjct: 696 IPRSSAI-KILQQIKKEGSFD-IKVTLLHCIKHLQGDHKLFAADILLQLNALDSPPENKK 753
Query: 553 YREEA 557
YR EA
Sbjct: 754 YRNEA 758
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
+F CP+++ + DPV L +GQT+++ I++W + GN TCP T+Q L +T L N +++
Sbjct: 77 EFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT-PNLLIRE 135
Query: 190 LIASWKERN 198
+I+ W ++N
Sbjct: 136 MISKWCKKN 144
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQ-LPKTNYVLKR 189
F CPI+ ++ PV+L TG T++R +I+ W + GN TCP T Q LQN +P N L+R
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIP--NRTLQR 71
Query: 190 LIASWKE 196
LI W +
Sbjct: 72 LIEIWSD 78
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQN-TQLPKTNYVLK 188
+F CPI+ ++ DPV + TG T++R +IE W N GN TCP+T L Q+P N+ ++
Sbjct: 34 EFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP--NHTIR 91
Query: 189 RLIASW 194
++I W
Sbjct: 92 KMIQGW 97
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNT-QLPKTNYVLK 188
F CPI+ + DPV + +G T++R+ IE+WF G TCP+T L + Q+P N+ ++
Sbjct: 36 QFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIP--NHTIR 93
Query: 189 RLIASW 194
R+I W
Sbjct: 94 RMIQGW 99
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CPI+ ++ PV+L TG T++R +I+ W + GN TCP T Q L+ N L+RL
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVP-NLTLQRL 74
Query: 191 IASWKE---RNPNSVPP 204
I W + R N P
Sbjct: 75 INIWSDSIGRRHNGDSP 91
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
+ CPI I +DP G T+ERKAI+EW + P+T+ +L+++ L N+ L+
Sbjct: 712 YYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDL-TPNHTLRSA 770
Query: 191 IASWKERN 198
I W+ R+
Sbjct: 771 IREWRSRS 778
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CPIT +I +DP G T+E +AI WF RG+ T P+ ++L +T L N L+
Sbjct: 357 FICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLV-PNLALRSA 415
Query: 191 IASW 194
I W
Sbjct: 416 IQEW 419
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
+ CPI I ++P G T+ERKAI W + NI+ P+TRQKL + +L N+ L+
Sbjct: 729 YFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKL-TPNHTLRSA 786
Query: 191 IASWKER 197
I WK R
Sbjct: 787 IRDWKSR 793
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
DF CPI+ I DP G T+E + +W G T P T + L+N L N+ L+
Sbjct: 236 DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLV-PNHTLRI 294
Query: 190 LIASWKERNPN 200
+I W E+NPN
Sbjct: 295 IIKDWLEKNPN 305
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
+F C ++ I DPV + +GQT+E++ I EW N ++TCP +Q L L N+++
Sbjct: 77 EFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTP-NHLINE 134
Query: 190 LIASWKERNPNSVPPP 205
LI W N P P
Sbjct: 135 LITRWCLANKYDRPAP 150
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CPI+ I DPVT +G T++R+ I +W + +CP+T+Q L N++L+RL
Sbjct: 28 FICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVP-SCPVTKQPLPLDSDLTPNHMLRRL 86
Query: 191 IASW 194
I W
Sbjct: 87 IQHW 90
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F CP+ ++ +P G T++R+AIEEW + T P+T LQN L N+ L
Sbjct: 753 FFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNL-LPNHTLYAA 810
Query: 191 IASWKERN 198
I W+ RN
Sbjct: 811 IVEWRNRN 818
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKL-QNTQLPKTNYVLKR 189
F+CPI+ + +P G T+E +++ EW + G+ T P+T KL N +P N+ L+
Sbjct: 501 FICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVP--NHALRS 558
Query: 190 LIASWKERN 198
I W +RN
Sbjct: 559 AIQEWLQRN 567
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CPI+ +I +P G T+E W N G P+T +L+N L N VL+
Sbjct: 298 FICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLI-PNLVLRSA 356
Query: 191 IASWKERNP 199
I W +++P
Sbjct: 357 IKDWLQQHP 365
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CP+ + ++P G T++R+AIEEW R T P+T L N L NY L
Sbjct: 779 FICPLLKGVMNEPCVAADGYTYDREAIEEWL-RQKDTSPVTNLPLPNKNL-IANYTLYSA 836
Query: 191 IASWK 195
I WK
Sbjct: 837 IMEWK 841
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CP+ + ++P G T++R+AIEEW R T P+T L N L NY L
Sbjct: 779 FICPLLKGVMNEPCVAADGYTYDREAIEEWL-RQKDTSPVTNLPLPNKNL-IANYTLYSA 836
Query: 191 IASWK 195
I WK
Sbjct: 837 IMEWK 841
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKR 189
+F+C +++ I +PV + +GQT+E++ I EW TCP T+Q L + +L N+++
Sbjct: 75 EFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-TCPKTKQVLSH-RLWIPNHLISD 132
Query: 190 LIASW 194
LI W
Sbjct: 133 LITQW 137
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 131 FVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPITRQKLQNTQLPKTNYVLKRL 190
F+CPI+ + DP G T+E +AI W G+ T P+T KL +T+L N L+
Sbjct: 329 FICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLV-PNLALRSA 387
Query: 191 IASW 194
I W
Sbjct: 388 IQEW 391
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 130 DFVCPITSNIFDDPVTLETGQTFERKAIEEWFNRGNITCPI--TRQKLQNTQLPKTNYVL 187
+F+CPIT + DPV + +GQTFER +++ N G I + TR L +T +P N +
Sbjct: 34 EFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDL-STVIP--NLAM 90
Query: 188 KRLIASWKERNPNSVPPPCESSCEDSADAETVVKT 222
K I SW +R P P D+A E VV+
Sbjct: 91 KSTIFSWCDRQKVDHPRP-----PDAAYVEGVVRA 120