Miyakogusa Predicted Gene

Lj4g3v3044970.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3044970.2 tr|G7L7G1|G7L7G1_MEDTR tRNA
A64-2'-O-ribosylphosphate transferase OS=Medicago truncatula
GN=MTR_8g10,80.15,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
(Phosphotyrosine protein) phosphatases II,NULL; coi,CUFF.52182.2
         (537 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40570.1 | Symbols:  | initiator tRNA phosphoribosyl transfer...   664   0.0  
AT2G40570.2 | Symbols:  | initiator tRNA phosphoribosyl transfer...   568   e-162

>AT2G40570.1 | Symbols:  | initiator tRNA phosphoribosyl transferase
           family protein | chr2:16941066-16943288 FORWARD
           LENGTH=521
          Length = 521

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/522 (62%), Positives = 399/522 (76%), Gaps = 13/522 (2%)

Query: 2   AEEEEEGGIGKLSIYKAARSIKRRDNTLYNALKSIYHDSIFIGEISQLWPQLPLVANLRC 61
           A+ EE     + SIY+AAR+IKRRDN+LYNAL+SIY DSIF+ EIS LWP+LPLVANLRC
Sbjct: 3   AKSEEPMMTTRDSIYRAARNIKRRDNSLYNALRSIYQDSIFVHEISLLWPKLPLVANLRC 62

Query: 62  GLWYSSNFHSTCYFKSTDGHTNNCSFNTSRLNLHLAHLAGQKGGCMVVDSTRRGKRFPDS 121
           GLWYS  F +TCYFKSTDGHTNN SFNTSRLNLHL  LAG+KGGC+++DSTR+GKRFPDS
Sbjct: 63  GLWYSEKFDATCYFKSTDGHTNNLSFNTSRLNLHLPLLAGEKGGCIIIDSTRKGKRFPDS 122

Query: 122 MSKTIPIWTCVLNRAIANFRRDFHGDSSSPELIQDSNGCEYDEPAKVARDVSSDWDCSLH 181
           MSKTIP+W+CV+NR+I N     H +     L     G   D+     R +   WDCSLH
Sbjct: 123 MSKTIPMWSCVVNRSIFN-----HWN----RLCNIDAGLTSDDDGDNIRKLLDKWDCSLH 173

Query: 182 LPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRPLWISQKTVIWLNEVPH 241
           LPLWVS TE+ASIE RL+EWT  L  SGADIA+LA+CL+KPLRPLW+SQKTVIWLNEVP 
Sbjct: 174 LPLWVSNTERASIEARLDEWTRELDESGADIASLASCLRKPLRPLWVSQKTVIWLNEVPE 233

Query: 242 HDSWDFTPVILVSASSTIGISQHRTTSEFSWNYIPGAGDDEESWARGLSPALFWNHVYDL 301
           HDSWDFTP+ILVSAS++ G  Q+RT+SEFSWNYIPGAGDDEESWARGLSP +FW HV DL
Sbjct: 234 HDSWDFTPLILVSASAS-GELQNRTSSEFSWNYIPGAGDDEESWARGLSPNVFWTHVDDL 292

Query: 302 INSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVK-SLNSAFLSQEEPSLVSDISNIKI 360
           I+SGPD+CN KVA+IVE  RV RA+RG+ APQ+ VK S ++  ++  +   +  +S    
Sbjct: 293 IHSGPDLCNQKVAEIVENDRVYRAHRGQEAPQVVVKCSKSNGGVNHAKSDEILCLS--AQ 350

Query: 361 YPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESITVSLPSAGAYLHLPMLT 420
            P+  ++  + WL S+NLAVG SQ+A     +DCILNCD   I+V +     +LHLPM  
Sbjct: 351 IPKVDEERLVFWLSSTNLAVGASQVACKETSIDCILNCDQNPISVPVSYLEEHLHLPMKG 410

Query: 421 SKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCVCLASLMSLFEEKGNFDD 480
           SKFDRFS+  NLP AV+FAK  +  GK++LVCC +GEDIS+CVCLA LMSLF E+G FD 
Sbjct: 411 SKFDRFSISRNLPPAVNFAKLKMSSGKKVLVCCQDGEDISICVCLAILMSLFNEEGAFDG 470

Query: 481 GKSFNLTQVTKWDIRRRLVYVCKFATNARPSRGNLRQVFNFL 522
           GKSF    +TK D+RR L+++CK+A NARPSRGNL+QVF FL
Sbjct: 471 GKSFEEKSITKMDMRRMLIFICKYAVNARPSRGNLKQVFGFL 512


>AT2G40570.2 | Symbols:  | initiator tRNA phosphoribosyl transferase
           family protein | chr2:16941066-16942977 FORWARD
           LENGTH=462
          Length = 462

 Score =  568 bits (1464), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 283/463 (61%), Positives = 347/463 (74%), Gaps = 13/463 (2%)

Query: 2   AEEEEEGGIGKLSIYKAARSIKRRDNTLYNALKSIYHDSIFIGEISQLWPQLPLVANLRC 61
           A+ EE     + SIY+AAR+IKRRDN+LYNAL+SIY DSIF+ EIS LWP+LPLVANLRC
Sbjct: 3   AKSEEPMMTTRDSIYRAARNIKRRDNSLYNALRSIYQDSIFVHEISLLWPKLPLVANLRC 62

Query: 62  GLWYSSNFHSTCYFKSTDGHTNNCSFNTSRLNLHLAHLAGQKGGCMVVDSTRRGKRFPDS 121
           GLWYS  F +TCYFKSTDGHTNN SFNTSRLNLHL  LAG+KGGC+++DSTR+GKRFPDS
Sbjct: 63  GLWYSEKFDATCYFKSTDGHTNNLSFNTSRLNLHLPLLAGEKGGCIIIDSTRKGKRFPDS 122

Query: 122 MSKTIPIWTCVLNRAIANFRRDFHGDSSSPELIQDSNGCEYDEPAKVARDVSSDWDCSLH 181
           MSKTIP+W+CV+NR+I N             L     G   D+     R +   WDCSLH
Sbjct: 123 MSKTIPMWSCVVNRSIFNHWN---------RLCNIDAGLTSDDDGDNIRKLLDKWDCSLH 173

Query: 182 LPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRPLWISQKTVIWLNEVPH 241
           LPLWVS TE+ASIE RL+EWT  L  SGADIA+LA+CL+KPLRPLW+SQKTVIWLNEVP 
Sbjct: 174 LPLWVSNTERASIEARLDEWTRELDESGADIASLASCLRKPLRPLWVSQKTVIWLNEVPE 233

Query: 242 HDSWDFTPVILVSASSTIGISQHRTTSEFSWNYIPGAGDDEESWARGLSPALFWNHVYDL 301
           HDSWDFTP+ILVSAS++ G  Q+RT+SEFSWNYIPGAGDDEESWARGLSP +FW HV DL
Sbjct: 234 HDSWDFTPLILVSASAS-GELQNRTSSEFSWNYIPGAGDDEESWARGLSPNVFWTHVDDL 292

Query: 302 INSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVK-SLNSAFLSQEEPSLVSDISNIKI 360
           I+SGPD+CN KVA+IVE  RV RA+RG+ APQ+ VK S ++  ++  +   +  +S    
Sbjct: 293 IHSGPDLCNQKVAEIVENDRVYRAHRGQEAPQVVVKCSKSNGGVNHAKSDEILCLS--AQ 350

Query: 361 YPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESITVSLPSAGAYLHLPMLT 420
            P+  ++  + WL S+NLAVG SQ+A     +DCILNCD   I+V +     +LHLPM  
Sbjct: 351 IPKVDEERLVFWLSSTNLAVGASQVACKETSIDCILNCDQNPISVPVSYLEEHLHLPMKG 410

Query: 421 SKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCV 463
           SKFDRFS+  NLP AV+FAK  +  GK++LVCC +G+   +C+
Sbjct: 411 SKFDRFSISRNLPPAVNFAKLKMSSGKKVLVCCQDGKYQYMCL 453