Miyakogusa Predicted Gene

Lj4g3v3044970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3044970.1 tr|G7L7G1|G7L7G1_MEDTR tRNA
A64-2'-O-ribosylphosphate transferase OS=Medicago truncatula
GN=MTR_8g10,78.82,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
(Phosphotyrosine protein) phosphatases II,NULL; coi,CUFF.52182.1
         (431 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40570.1 | Symbols:  | initiator tRNA phosphoribosyl transfer...   499   e-141
AT2G40570.2 | Symbols:  | initiator tRNA phosphoribosyl transfer...   404   e-113

>AT2G40570.1 | Symbols:  | initiator tRNA phosphoribosyl transferase
           family protein | chr2:16941066-16943288 FORWARD
           LENGTH=521
          Length = 521

 Score =  499 bits (1286), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/417 (59%), Positives = 310/417 (74%), Gaps = 13/417 (3%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFHGDSSSPELIQDSNGCEYDEPA 60
           +++DSTR+GKRFPDSMSKTIP+W+CV+NR+I N     H +     L     G   D+  
Sbjct: 108 IIIDSTRKGKRFPDSMSKTIPMWSCVVNRSIFN-----HWN----RLCNIDAGLTSDDDG 158

Query: 61  KVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRPL 120
              R +   WDCSLHLPLWVS TE+ASIE RL+EWT  L  SGADIA+LA+CL+KPLRPL
Sbjct: 159 DNIRKLLDKWDCSLHLPLWVSNTERASIEARLDEWTRELDESGADIASLASCLRKPLRPL 218

Query: 121 WISQKTVIWLNEVPHHDSWDFTPVILVSASSTIGISQHRTTSEFSWNYIPGAGDDEESWA 180
           W+SQKTVIWLNEVP HDSWDFTP+ILVSAS++ G  Q+RT+SEFSWNYIPGAGDDEESWA
Sbjct: 219 WVSQKTVIWLNEVPEHDSWDFTPLILVSASAS-GELQNRTSSEFSWNYIPGAGDDEESWA 277

Query: 181 RGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVK-SLNSAFLS 239
           RGLSP +FW HV DLI+SGPD+CN KVA+IVE  RV RA+RG+ APQ+ VK S ++  ++
Sbjct: 278 RGLSPNVFWTHVDDLIHSGPDLCNQKVAEIVENDRVYRAHRGQEAPQVVVKCSKSNGGVN 337

Query: 240 QEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESITV 299
             +   +  +S     P+  ++  + WL S+NLAVG SQ+A     +DCILNCD   I+V
Sbjct: 338 HAKSDEILCLS--AQIPKVDEERLVFWLSSTNLAVGASQVACKETSIDCILNCDQNPISV 395

Query: 300 SLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCVCL 359
            +     +LHLPM  SKFDRFS+  NLP AV+FAK  +  GK++LVCC +GEDIS+CVCL
Sbjct: 396 PVSYLEEHLHLPMKGSKFDRFSISRNLPPAVNFAKLKMSSGKKVLVCCQDGEDISICVCL 455

Query: 360 ASLMSLFEEKGNFDDGKSFNLTQVTKWDIRRRLVYVCKFATNARPSRGNLRQVFNFL 416
           A LMSLF E+G FD GKSF    +TK D+RR L+++CK+A NARPSRGNL+QVF FL
Sbjct: 456 AILMSLFNEEGAFDGGKSFEEKSITKMDMRRMLIFICKYAVNARPSRGNLKQVFGFL 512


>AT2G40570.2 | Symbols:  | initiator tRNA phosphoribosyl transferase
           family protein | chr2:16941066-16942977 FORWARD
           LENGTH=462
          Length = 462

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/358 (56%), Positives = 258/358 (72%), Gaps = 13/358 (3%)

Query: 1   MVVDSTRRGKRFPDSMSKTIPIWTCVLNRAIANFRRDFHGDSSSPELIQDSNGCEYDEPA 60
           +++DSTR+GKRFPDSMSKTIP+W+CV+NR+I N             L     G   D+  
Sbjct: 108 IIIDSTRKGKRFPDSMSKTIPMWSCVVNRSIFNHWN---------RLCNIDAGLTSDDDG 158

Query: 61  KVARDVSSDWDCSLHLPLWVSGTEKASIEERLEEWTERLKASGADIATLAACLKKPLRPL 120
              R +   WDCSLHLPLWVS TE+ASIE RL+EWT  L  SGADIA+LA+CL+KPLRPL
Sbjct: 159 DNIRKLLDKWDCSLHLPLWVSNTERASIEARLDEWTRELDESGADIASLASCLRKPLRPL 218

Query: 121 WISQKTVIWLNEVPHHDSWDFTPVILVSASSTIGISQHRTTSEFSWNYIPGAGDDEESWA 180
           W+SQKTVIWLNEVP HDSWDFTP+ILVSAS++ G  Q+RT+SEFSWNYIPGAGDDEESWA
Sbjct: 219 WVSQKTVIWLNEVPEHDSWDFTPLILVSASAS-GELQNRTSSEFSWNYIPGAGDDEESWA 277

Query: 181 RGLSPALFWNHVYDLINSGPDVCNHKVADIVEKSRVQRAYRGEIAPQIRVK-SLNSAFLS 239
           RGLSP +FW HV DLI+SGPD+CN KVA+IVE  RV RA+RG+ APQ+ VK S ++  ++
Sbjct: 278 RGLSPNVFWTHVDDLIHSGPDLCNQKVAEIVENDRVYRAHRGQEAPQVVVKCSKSNGGVN 337

Query: 240 QEEPSLVSDISNIKIYPESSDDFAMSWLGSSNLAVGTSQIAVDAADVDCILNCDCESITV 299
             +   +  +S     P+  ++  + WL S+NLAVG SQ+A     +DCILNCD   I+V
Sbjct: 338 HAKSDEILCLS--AQIPKVDEERLVFWLSSTNLAVGASQVACKETSIDCILNCDQNPISV 395

Query: 300 SLPSAGAYLHLPMLTSKFDRFSLLNNLPKAVSFAKFNLGQGKRLLVCCNNGEDISVCV 357
            +     +LHLPM  SKFDRFS+  NLP AV+FAK  +  GK++LVCC +G+   +C+
Sbjct: 396 PVSYLEEHLHLPMKGSKFDRFSISRNLPPAVNFAKLKMSSGKKVLVCCQDGKYQYMCL 453