Miyakogusa Predicted Gene

Lj4g3v3044960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3044960.1 Non Chatacterized Hit- tr|D8UIH0|D8UIH0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,35.2,9e-16,CERAMIDE GLUCOSYLTRANSFERASE,NULL,CUFF.52185.1
         (290 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferase...   502   e-142
AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   499   e-141

>AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=520
          Length = 520

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/290 (81%), Positives = 258/290 (88%), Gaps = 4/290 (1%)

Query: 1   MGFATGGKTFFLWGGCMMMHADDFRQNRYGVVSGLKDGGYSDDMTLAAISGAQKRLITSP 60
           MGFATGG+TFFLWGGCMMMHADDFRQ+RYGVVSGL+DGGYSDDMTLA+++GA KRLITSP
Sbjct: 233 MGFATGGRTFFLWGGCMMMHADDFRQDRYGVVSGLRDGGYSDDMTLASLAGAHKRLITSP 292

Query: 61  PVAVFPHPLASDLNFGRYWNYLRKQTFVLESYISTVNWIMNRALFTVHCYLSWGFVAPYV 120
           PVAVFPHPLASDL+FGRYWNYLRKQTFVLESYIS VNWIMN+ALF VHCYLSWGFVAPYV
Sbjct: 293 PVAVFPHPLASDLSFGRYWNYLRKQTFVLESYISKVNWIMNKALFAVHCYLSWGFVAPYV 352

Query: 121 MALIHVAAALRFYSKEY-SLEEMTYTSGGLSLVALLAVCTLVELLSMWNLTRIEVQLCNM 179
           MA+IH+ +ALR Y K Y  LE+ T  SGG+ LV  LA+CT +ELLSMWNLTR EVQLCNM
Sbjct: 353 MAIIHITSALRIYIKGYHQLEDTTSASGGMMLVITLAICTFIELLSMWNLTRREVQLCNM 412

Query: 180 LSPEAPQLSLASYNWGLVFVALIVDNFLYPVSAFRSHLSQSINWSGIRYYLKDGKIFKIE 239
           LSPEAP+LSLA+YNWGLVFVA++VDNFLYP+SAFRSH SQSINWSGIRY+LKDGKIFKIE
Sbjct: 413 LSPEAPRLSLATYNWGLVFVAMLVDNFLYPISAFRSHFSQSINWSGIRYHLKDGKIFKIE 472

Query: 240 RTQGSKDMPPVFTDLGGKHLYGKKGMPTRGSFLSSLSRTLAQWHQPKKFD 289
           R    KDM P  TDLGGKHLYGKKG P + SFLSSL R LA W QPKKFD
Sbjct: 473 R---RKDMGPTKTDLGGKHLYGKKGAPQKASFLSSLGRNLAHWRQPKKFD 519


>AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=519
          Length = 519

 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/289 (80%), Positives = 256/289 (88%), Gaps = 3/289 (1%)

Query: 1   MGFATGGKTFFLWGGCMMMHADDFRQNRYGVVSGLKDGGYSDDMTLAAISGAQKRLITSP 60
           MGFATGG+TFFLWGGCMMMHADDFRQ+RYGVVSGL+DGGYSDDMTLA+++GA KRLITSP
Sbjct: 233 MGFATGGRTFFLWGGCMMMHADDFRQDRYGVVSGLRDGGYSDDMTLASLAGAHKRLITSP 292

Query: 61  PVAVFPHPLASDLNFGRYWNYLRKQTFVLESYISTVNWIMNRALFTVHCYLSWGFVAPYV 120
           PVAVFPHPLASDL+FGRYWNYLRKQTFVLESYIS VNWIMN+ALF VHCYLSWGFVAPYV
Sbjct: 293 PVAVFPHPLASDLSFGRYWNYLRKQTFVLESYISKVNWIMNKALFAVHCYLSWGFVAPYV 352

Query: 121 MALIHVAAALRFYSKEYSLEEMTYTSGGLSLVALLAVCTLVELLSMWNLTRIEVQLCNML 180
           MA+IH+ +ALR Y K Y   E T ++ G+ LV  LA+CT +ELLSMWNLTR EVQLCNML
Sbjct: 353 MAIIHITSALRIYIKGYHQLEDTTSASGMMLVITLAICTFIELLSMWNLTRREVQLCNML 412

Query: 181 SPEAPQLSLASYNWGLVFVALIVDNFLYPVSAFRSHLSQSINWSGIRYYLKDGKIFKIER 240
           SPEAP+LSLA+YNWGLVFVA++VDNFLYP+SAFRSH SQSINWSGIRY+LKDGKIFKIER
Sbjct: 413 SPEAPRLSLATYNWGLVFVAMLVDNFLYPISAFRSHFSQSINWSGIRYHLKDGKIFKIER 472

Query: 241 TQGSKDMPPVFTDLGGKHLYGKKGMPTRGSFLSSLSRTLAQWHQPKKFD 289
               KDM P  TDLGGKHLYGKKG P + SFLSSL R LA W QPKKFD
Sbjct: 473 ---RKDMGPTKTDLGGKHLYGKKGAPQKASFLSSLGRNLAHWRQPKKFD 518