Miyakogusa Predicted Gene

Lj4g3v3044950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3044950.1 tr|C1N0Q7|C1N0Q7_MICPC Glycosyltransferase family
21 protein OS=Micromonas pusilla (strain
CCMP1545),40.43,9e-17,SUBFAMILY NOT NAMED,NULL; CERAMIDE
GLUCOSYLTRANSFERASE,NULL; Nucleotide-diphospho-sugar
transferases,CUFF.52183.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   316   5e-87
AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferase...   316   5e-87

>AT2G19880.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=519
          Length = 519

 Score =  316 bits (810), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 147/176 (83%), Positives = 162/176 (92%)

Query: 11  RNREIKQMKAEMKNGNSLSFLYHDINELEHFNQVNLPRVTVVMPLKGFGEHNLHNWRSQI 70
           RNRE+K++K  +K GNSL+FLY DINELEH  QV LPRV+VVMPLKGFGEHNLHNWRSQI
Sbjct: 48  RNREVKRIKNSIKAGNSLAFLYQDINELEHSRQVKLPRVSVVMPLKGFGEHNLHNWRSQI 107

Query: 71  TSLYGGPLEFLFVVESTEDPAYHAISRLVSEFQDDVDAKIVVAGLSTTCSQKIHNQMVGV 130
           TSLYGGPLEFLFVVESTEDPAYHA+SRL+S +QD V+AK+VVAGLSTTCSQKIHNQ++GV
Sbjct: 108 TSLYGGPLEFLFVVESTEDPAYHAVSRLLSMYQDHVEAKVVVAGLSTTCSQKIHNQLIGV 167

Query: 131 ETMHKDSKYVLFLDDDVRLHPGSIGALTREMEKNPEIFIQTGYPRDLPSGRLGSDC 186
           E MHKD+KYVLFLDDDVRLHPG+IGALT EMEKNPEIFIQTGYP DLPSG LGS C
Sbjct: 168 EKMHKDTKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGTLGSYC 223


>AT2G19880.2 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr2:8581578-8585118 FORWARD
           LENGTH=520
          Length = 520

 Score =  316 bits (810), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 147/176 (83%), Positives = 162/176 (92%)

Query: 11  RNREIKQMKAEMKNGNSLSFLYHDINELEHFNQVNLPRVTVVMPLKGFGEHNLHNWRSQI 70
           RNRE+K++K  +K GNSL+FLY DINELEH  QV LPRV+VVMPLKGFGEHNLHNWRSQI
Sbjct: 48  RNREVKRIKNSIKAGNSLAFLYQDINELEHSRQVKLPRVSVVMPLKGFGEHNLHNWRSQI 107

Query: 71  TSLYGGPLEFLFVVESTEDPAYHAISRLVSEFQDDVDAKIVVAGLSTTCSQKIHNQMVGV 130
           TSLYGGPLEFLFVVESTEDPAYHA+SRL+S +QD V+AK+VVAGLSTTCSQKIHNQ++GV
Sbjct: 108 TSLYGGPLEFLFVVESTEDPAYHAVSRLLSMYQDHVEAKVVVAGLSTTCSQKIHNQLIGV 167

Query: 131 ETMHKDSKYVLFLDDDVRLHPGSIGALTREMEKNPEIFIQTGYPRDLPSGRLGSDC 186
           E MHKD+KYVLFLDDDVRLHPG+IGALT EMEKNPEIFIQTGYP DLPSG LGS C
Sbjct: 168 EKMHKDTKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGTLGSYC 223