Miyakogusa Predicted Gene
- Lj4g3v3042730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3042730.1 Non Chatacterized Hit- tr|I1NW04|I1NW04_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,52.17,0.0000000000007,DUF1005,Protein of unknown function
DUF1005; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NU,CUFF.52164.1
(497 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29310.1 | Symbols: | Protein of unknown function (DUF1005) ... 461 e-130
AT1G10020.1 | Symbols: | Protein of unknown function (DUF1005) ... 322 3e-88
AT3G19680.1 | Symbols: | Protein of unknown function (DUF1005) ... 267 2e-71
AT1G50040.1 | Symbols: | Protein of unknown function (DUF1005) ... 247 1e-65
AT5G17640.1 | Symbols: | Protein of unknown function (DUF1005) ... 215 7e-56
>AT4G29310.1 | Symbols: | Protein of unknown function (DUF1005) |
chr4:14437892-14439609 REVERSE LENGTH=424
Length = 424
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/435 (57%), Positives = 289/435 (66%), Gaps = 21/435 (4%)
Query: 73 MDPCPFVRLMVEXXXXXXXXXXXXXXXXG-VHPSTTPCFCEIQIHKSLPIHXXXXXXXXX 131
MDPCPFVRL ++ G VHPS+TPC+C+++I K P
Sbjct: 1 MDPCPFVRLTIDSLALRLPETATNKQIGGEVHPSSTPCYCKLRI-KHFPSQKALLPLSSF 59
Query: 132 XXXXX--XXXXXXXXFHLDSAAIRRLSAKPLTVSISVYNGRKGRTCGVRSAKFLGRVRLT 189
FHLD+ AIRR+S K +++ +SVY GR G TCGV S K LG+V +
Sbjct: 60 SDASSPPESSTSAPGFHLDADAIRRISGKKISLRVSVYAGRTGHTCGVASGKLLGKVEVA 119
Query: 190 VHLNSALSGFNTFQSGWFKLARNGVGPGTDKQSAQLHLVVRSEPDPRFVFQFGGEPECSP 249
V L +ALS F +GW KL +G DK SA+LHL+V +EPDPRFVFQFGGEPECSP
Sbjct: 120 VDLAAALSRTVAFHNGWKKLGGDG-----DKPSARLHLLVCAEPDPRFVFQFGGEPECSP 174
Query: 250 VVFQIQGNIKQPVFSCKFSADRTYRSPSLPSDFTNNPSSW-RRSFSGDRERESQGRDRKG 308
VV+QIQ N+KQPVFSCKFS+DR RS SLPS FT + W R+ SGD+ + Q R+RKG
Sbjct: 175 VVYQIQDNLKQPVFSCKFSSDRNGRSRSLPSGFTYSSRGWITRTLSGDQWEKKQARERKG 234
Query: 309 WMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNAGAWLILRPNGASSAISSWKPWSRL 368
WMI IHDLSGSPVAAASMITPFV SPGSDRVSRSN GAWLILRP+G + +SSWKPW RL
Sbjct: 235 WMITIHDLSGSPVAAASMITPFVASPGSDRVSRSNPGAWLILRPHG--TCVSSWKPWGRL 292
Query: 369 EAWRERGPVDGLGYKVELFSDNENR--IPIAEGTMGVKKGGQFCIDYKVMKDSGLGS--- 423
EAWRERG +DGLGYK EL DN IPIAEGTM K+GG+F ID +V SG G
Sbjct: 293 EAWRERGAIDGLGYKFELVRDNSTSTGIPIAEGTMSTKQGGKFSIDRRV---SGQGESPA 349
Query: 424 -RVPGEGFVMGSSVGGEGKISKPVVQVGAQHVKCMXXXXXXXXXXXXXXXXMDACMLFSH 482
P +GFVMGSSV GEGK+SKPVV VGAQHV CM +DAC LFS
Sbjct: 350 ISSPVKGFVMGSSVEGEGKVSKPVVHVGAQHVTCMADAALFVALSAAVDLSVDACQLFSR 409
Query: 483 KLRKELCHDEQDSLS 497
KLRKELCHD+Q SL+
Sbjct: 410 KLRKELCHDDQSSLT 424
>AT1G10020.1 | Symbols: | Protein of unknown function (DUF1005) |
chr1:3269939-3271732 REVERSE LENGTH=461
Length = 461
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/470 (41%), Positives = 247/470 (52%), Gaps = 63/470 (13%)
Query: 73 MDPCPFVRLMVEXXXXXXXXXXXXXXXXGVHPSTTPCFCEIQIHKSLPIHXXXXXXXXXX 132
MDPCPF+RL + S+ CFC+I++ P
Sbjct: 1 MDPCPFIRLTIGNLALKVPLAAKTTSSVVHPSSSP-CFCKIKLKNFPPQTAAIPYIPLET 59
Query: 133 XXXXXXXXXXXXFHLDSAAIRRLSAKPLTVS-----ISVYNGRKGRTCGVRSAKFLGRVR 187
FHL S+ I+RL+++ + S I +Y GR G CGV S + L +V
Sbjct: 60 TQFPEIQTLAATFHLSSSDIQRLASRSIFTSKPCLKILIYTGRAGAACGVHSGRLLAKVS 119
Query: 188 LTVHLNSALSGFNTFQSGWFKLARNGVGPGTDKQSAQLHLVVRSEPDPRFVFQFGGEPEC 247
+ + L+ S F +GW + G G G SAQ HL V++EPDPRFVFQF GEPEC
Sbjct: 120 VPLDLSGTQSKPCVFHNGWISV---GKGAGKSSSSAQFHLNVKAEPDPRFVFQFDGEPEC 176
Query: 248 SPVVFQIQGNIKQPVFSCKFS----ADRTYRSPSLPSDFTNNPSSWRRSFSGDRERESQG 303
SP V QIQGNI+QPVF+CKFS DRT RS SLP++ T+ SW SF +RER G
Sbjct: 177 SPQVVQIQGNIRQPVFTCKFSCRHTGDRTQRSRSLPTE-TSVSRSWLNSFGSERERP--G 233
Query: 304 RDRKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNAGAWLILRPNGASSAISSWK 363
++RKGW I +HDLSGSPVA AS++TPFV SPG+DRVSRSN G+WLILRP +W+
Sbjct: 234 KERKGWSITVHDLSGSPVAMASIVTPFVASPGTDRVSRSNPGSWLILRPGDC-----TWR 288
Query: 364 PWSRLEAWRER-GPVDGLGYKVELFSDNEN--RIPIAEGTMGVKKGGQFCIDYKVMKDSG 420
PW RLEAWRER G DGLGY+ EL D + I +AE T+ +GG+F I+ S
Sbjct: 289 PWGRLEAWRERGGATDGLGYRFELIPDGSSGAGIVLAESTISSHRGGKFSIELGSSPSSS 348
Query: 421 LGSRVPG---------------------------------------EGFVMGSSVGGEGK 441
+ V +GFVM +SV GEGK
Sbjct: 349 SPTSVVNRSRSRRGGSSGSGGGASPANSPRGGSGDYGYGLWPWNVYKGFVMSASVEGEGK 408
Query: 442 ISKPVVQVGAQHVKCMXXXXXXXXXXXXXXXXMDACMLFSHKLRKELCHD 491
SKP V+V QHV CM MDAC LF+ ++RKELCH+
Sbjct: 409 CSKPCVEVSVQHVSCMEDAAAYVALSAAIDLSMDACRLFNQRMRKELCHE 458
>AT3G19680.1 | Symbols: | Protein of unknown function (DUF1005) |
chr3:6840448-6842107 FORWARD LENGTH=491
Length = 491
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 234/495 (47%), Gaps = 82/495 (16%)
Query: 73 MDPCPFVRLMVEXXXX------XXXXXXXXXXXXGVHPSTTPCFCEIQIHK------SLP 120
MDPC FVR++V G++P+ C+C+I+ S+P
Sbjct: 1 MDPCSFVRIIVGNLAVRFPSSSSSSSSSSGPSVSGINPTAPNCYCKIRFKNFPREIVSVP 60
Query: 121 IHXXXXXXXXXXXXXXXXXXXXXX-FHLDSAAIRRLSAKPL--TVSISVY--------NG 169
+ F L A I KP +S+ Y +G
Sbjct: 61 VMFRTESESETRCSSSGNVSTVAACFSLSKAQIEASLKKPKFSVLSVEAYSRGNSDGDDG 120
Query: 170 RKGRTCGVRSA--KFLGRVRLTVHLNSALSGFNTFQSGWFKLARNGVGPGTDKQSAQLHL 227
G +CG+ +A K LGR +++ L SA + +GW L T +LH+
Sbjct: 121 VSGASCGLATAGEKLLGRFEVSLDLKSAETKSFLAHNGWVALPSKKTKSKTGSD-PELHV 179
Query: 228 VVRSEPDPRFVFQFGGEPECSPVVFQIQGNIKQPVFSCKF------SADRTYRSPSLPSD 281
VR EPDPRFVFQF GEPECSP VFQ+QGN KQ VF+CKF S DR S
Sbjct: 180 SVRVEPDPRFVFQFDGEPECSPQVFQVQGNTKQAVFTCKFGSRNSNSGDRNLLHSSSMMS 239
Query: 282 FTNNPSSWRRSFSGDRERESQGRDRKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSR 341
++ S S + ++E+ S ++RKGW I +HDLSGSPVA ASM+TPFVPSPGS+RV+R
Sbjct: 240 EISSTRSCISSMNSEKEQPS--KERKGWSITVHDLSGSPVAMASMVTPFVPSPGSNRVTR 297
Query: 342 SNAGAWLILRPNGASSAISSWKPWSRLEAWRERGPVDGLGYKVELFSDNENRIPIAEGTM 401
S+ GAWLILRP+G +WKPW RLEAWRE G D LGY+ ELF D A ++
Sbjct: 298 SSPGAWLILRPDGC-----TWKPWGRLEAWREAGYSDTLGYRFELFQDGIATAVSASSSI 352
Query: 402 GVKKGGQFCID-------------------YKVMKDSGLGSR---VPGE----------- 428
+K GG F ID + + S GSR PG
Sbjct: 353 SLKNGGSFVIDVTGGTSTTASTPTTSPQGSWDLGSGSSAGSRPASRPGSGSGSDFGYLLP 412
Query: 429 ----------GFVMGSSVGGEGKISKPVVQVGAQHVKCMXXXXXXXXXXXXXXXXMDACM 478
GFVM ++V G GK SKP V+VG HV C +DAC
Sbjct: 413 QHPSAAAQNRGFVMSATVEGVGKRSKPEVEVGVTHVTCTEDAAAHVALAAAVDLSLDACR 472
Query: 479 LFSHKLRKELCHDEQ 493
LFSHKLRKEL Q
Sbjct: 473 LFSHKLRKELRQQSQ 487
>AT1G50040.1 | Symbols: | Protein of unknown function (DUF1005) |
chr1:18542236-18543823 FORWARD LENGTH=460
Length = 460
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 223/475 (46%), Gaps = 83/475 (17%)
Query: 73 MDPCPFVRLMVEXXXX-------XXXXXXXXXXXXGVHPSTTPCFCEIQIHK------SL 119
MDPC FVR++V S+ C+C+I+ S+
Sbjct: 1 MDPCSFVRIIVGNLAVRFPRSPSSSSSSSSSSGPSVSDVSSGNCYCKIKFKSFPRQIVSV 60
Query: 120 PIHXXXXXXXXXXXXXXXXXXXXXXFHLDSAAIRR--LSAKPLTVSISVYNGRKGRTCGV 177
P+ F L + I AK +S+ VY+ R+ +CG
Sbjct: 61 PVLLRTESESESRCCSGNVSTVAACFSLSKSQIETSLKKAKWSVLSVEVYS-RRSASCGF 119
Query: 178 RSA---KFLGRVRLTVHLNSALSGFNTFQSGWFKL---ARNGVGPGTDKQSAQLHLVVRS 231
+A K +GR ++T+ L +A S +GW L ++N G+D +LH+ VR
Sbjct: 120 VAASGEKLIGRFQVTLDLKAAESKTCLAHNGWVDLGTKSKNNKKSGSD---PELHVSVRV 176
Query: 232 EPDPRFVFQFGGEPECSPVVFQIQGNIKQPVFSCKF----SADRTYRSPSLPSDFTNNPS 287
EPD RFVFQF GEPECSP VFQ+QGN KQ VF+CKF S DR N
Sbjct: 177 EPDTRFVFQFDGEPECSPQVFQVQGNAKQAVFTCKFGFRNSGDR------------NLSL 224
Query: 288 SWRRSFSGDRERESQGRDRKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNAGAW 347
S SG +E ++RKGW I IHDLSGSPVA ASM+TPFVPSPGS+RVSRS+ GAW
Sbjct: 225 SLSSVTSG---KEQFSKERKGWSITIHDLSGSPVAMASMVTPFVPSPGSNRVSRSSPGAW 281
Query: 348 LILRPNGASSAISSWKPWSRLEAWRERGPVDGLGYKVELFSDNENRIPIAEGTMGVKKGG 407
LILRP+G +WKPW RL+AWRE G D LGY+ EL+ D A ++ K GG
Sbjct: 282 LILRPDGY-----TWKPWVRLQAWREPGVSDVLGYRFELYKDGIAVAVSASSSISTKLGG 336
Query: 408 QFCID--------------------------YKVMKDSGLGSRV--------PGEGFVMG 433
F ID DSG GS GFVM
Sbjct: 337 SFIIDGSTSTTTTASWSSSEGSFDLSSWSSIRSSRTDSGSGSDFRFSLSQAQQNLGFVMS 396
Query: 434 SSVGGEGKISKPVVQVGAQHVKCMXXXXXXXXXXXXXXXXMDACMLFSHKLRKEL 488
+ V G K SKP V+VG +HV C MDAC LFS KLR EL
Sbjct: 397 TRVQGVEKQSKPKVEVGVKHVTCTEDAAAHVALAAAVDLSMDACRLFSQKLRNEL 451
>AT5G17640.1 | Symbols: | Protein of unknown function (DUF1005) |
chr5:5811047-5812429 REVERSE LENGTH=432
Length = 432
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 207/413 (50%), Gaps = 45/413 (10%)
Query: 73 MDPCPFVRLMVEXXXXXXXXXXXXXXXXGVHPS--TTPCFCEIQIHKSLPIHXXXXXXXX 130
MDP F+RL V ++ C CEI++ + P+
Sbjct: 1 MDPQAFIRLSVGSLALRIPKVLINSTSKSNEKKNFSSQCSCEIKL-RGFPVQTTSIPLMP 59
Query: 131 XXXXXXXXXXXXXXFHLDSAAIRRL------SAKPLTVSISVYNGRKGRTCGVRSAKF-L 183
F+L+ + +R L + + ISV+ G+K CGV + +
Sbjct: 60 SLDAAPDHHSISTSFYLEESDLRALLTPGCFYSPHAHLEISVFTGKKSLNCGVGGKRQQI 119
Query: 184 GRVRLTVHLNSALSGFNTFQSGWFKLARNGVGPGTDKQSAQLHLVVRSEPDPRFVFQFGG 243
G +L V +GW +G +A+LHL V+ +PDPR+VFQF
Sbjct: 120 GMFKLEVGPEWGEGKPMILFNGWIS-----IGKTKRDGAAELHLKVKLDPDPRYVFQFED 174
Query: 244 EPECSPVVFQIQGNIKQPVFSCKFSADRTYRSPSLPSDFTNNPSSWRRSFSGD-RERESQ 302
SP + Q++G++KQP+FSCKFS DR + +P + S SGD E ES+
Sbjct: 175 VTTLSPQIVQLRGSVKQPIFSCKFSRDRVSQV---------DPLNGYWSSSGDGTELESE 225
Query: 303 GRDRKGWMIMIHDLSGSPVAAASMITPFVPSPGSDRVSRSNAGAWLILRPNGASSAISSW 362
R+RKGW + IHDLSGS VAAA + TPFVPS G D V++SN GAWL++RP+ S +SW
Sbjct: 226 RRERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVAKSNPGAWLVVRPD--PSRPNSW 283
Query: 363 KPWSRLEAWRERGPVDGLGYKVELFSD--NENRIPIAEGTMGVKKGGQFCIDY-KVMKD- 418
+PW +LEAWRERG D + + L S+ + ++E + +KGG+F ID K M
Sbjct: 284 QPWGKLEAWRERGIRDSVCCRFHLLSNGLEVGDVLMSEILISAEKGGEFLIDTDKQMLTV 343
Query: 419 --------------SGLGSRVPGEGFVMGSSVGGEGKISKPVVQVGAQHVKCM 457
SGLG V G GFVM S V GEGK SKPVVQ+ +HV C+
Sbjct: 344 AATPIPSPQSSGDFSGLGQCVSGGGFVMSSRVQGEGKSSKPVVQLAMRHVTCV 396