Miyakogusa Predicted Gene

Lj4g3v3020580.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3020580.2 Non Chatacterized Hit- tr|I1KJT1|I1KJT1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,63.29,8e-19,coiled-coil,NULL; Snf7,Snf7; SNF7 -
RELATED,NULL,CUFF.52153.2
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19830.1 | Symbols: SNF7.2, VPS32 | SNF7 family protein | chr...   182   3e-47
AT4G29160.3 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...   167   1e-42
AT4G29160.1 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...   167   1e-42
AT4G29160.2 | Symbols: SNF7.1 | SNF7 family protein | chr4:14381...   124   1e-29

>AT2G19830.1 | Symbols: SNF7.2, VPS32 | SNF7 family protein |
           chr2:8558101-8559389 REVERSE LENGTH=213
          Length = 213

 Score =  182 bits (463), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/106 (84%), Positives = 99/106 (93%), Gaps = 1/106 (0%)

Query: 1   MF-TRIFGKPKQEANALATLDKLNETLDMLEKKEKVLIKKASQEVEKAKDFTKAKNKRAA 59
           MF  R+FGKPKQE + L TLDKLNETL+MLEKKE VL+KKA+ EVEKAK+F++AKNKRAA
Sbjct: 1   MFMNRLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAA 60

Query: 60  IQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRT 105
           IQCLKRKRLYEQQ+EQLGNFQLRIHDQMIMLEGAKATTETVDALRT
Sbjct: 61  IQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRT 106


>AT4G29160.3 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381019-14382342 FORWARD LENGTH=219
          Length = 219

 Score =  167 bits (423), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 99/105 (94%)

Query: 1   MFTRIFGKPKQEANALATLDKLNETLDMLEKKEKVLIKKASQEVEKAKDFTKAKNKRAAI 60
           M  R+FGKPKQEANAL TLDKLNETL+MLEKKEKVL+KKA  EVEKAK++++AKNKRAAI
Sbjct: 1   MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAI 60

Query: 61  QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRT 105
           QCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTETVDALR+
Sbjct: 61  QCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRS 105


>AT4G29160.1 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381019-14382342 FORWARD LENGTH=219
          Length = 219

 Score =  167 bits (423), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 99/105 (94%)

Query: 1   MFTRIFGKPKQEANALATLDKLNETLDMLEKKEKVLIKKASQEVEKAKDFTKAKNKRAAI 60
           M  R+FGKPKQEANAL TLDKLNETL+MLEKKEKVL+KKA  EVEKAK++++AKNKRAAI
Sbjct: 1   MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAI 60

Query: 61  QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRT 105
           QCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTETVDALR+
Sbjct: 61  QCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRS 105


>AT4G29160.2 | Symbols: SNF7.1 | SNF7 family protein |
           chr4:14381350-14382342 FORWARD LENGTH=192
          Length = 192

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 63/66 (95%)

Query: 40  ASQEVEKAKDFTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTET 99
           A  EVEKAK++++AKNKRAAIQCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTET
Sbjct: 13  AGAEVEKAKEYSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTET 72

Query: 100 VDALRT 105
           VDALR+
Sbjct: 73  VDALRS 78