Miyakogusa Predicted Gene
- Lj4g3v3015070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3015070.1 Non Chatacterized Hit- tr|G7LIW1|G7LIW1_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,76.62,0,DDT,DDT
domain; coiled-coil,NULL; domain in different transcription and
chromo,DDT domain, subgroup;,CUFF.52117.1
(958 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12750.1 | Symbols: | Homeodomain-like transcriptional regul... 893 0.0
AT5G44180.2 | Symbols: | Homeodomain-like transcriptional regul... 171 2e-42
AT5G44180.1 | Symbols: | Homeodomain-like transcriptional regul... 171 3e-42
AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460 ... 143 6e-34
>AT4G12750.1 | Symbols: | Homeodomain-like transcriptional regulator
| chr4:7498009-7503920 REVERSE LENGTH=1131
Length = 1131
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/964 (52%), Positives = 647/964 (67%), Gaps = 41/964 (4%)
Query: 16 NASVKKHGIGKGLMTIWRATNPDSGELPVGFGFADREVHLISNSKKSVRENNRSSKTATX 75
NA+V KHGIGKGLMT+WR NP+ ++ D L +S + N K
Sbjct: 173 NATVMKHGIGKGLMTVWRVMNPNRRDVSPCVDLLDERATLPQSSAR----NPPHQKKKQR 228
Query: 76 XXXXXXXXXXXXXXXXDKRKLLMQRKAGESNQHVTRNQSLKEKCELSLDSEISEEGVDRI 135
+K++ + R+A E N+ T+ + KE CEL+ D E+ +E I
Sbjct: 229 QLASILKQKLLQKRSTEKKRRSIHREA-ELNKDETQRE-FKENCELAADGEVFKETCQTI 286
Query: 136 SMLIDDXXXXXXXXXXXXXXXICSDHLAASGMLGCSLGK--------------DVLVKYP 181
S L+DD CS H +SG GC L K D+L K+P
Sbjct: 287 STLVDDEELEMRERHERGNPLTCSCHHPSSGSHGCFLCKGIAMRSSDSSLLFPDLLPKFP 346
Query: 182 PDTVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYATVVDICPFTLDEFVQAFHDKDSML 241
P++V+M+ P L PW+SSPE VKKLFKV HF+YTY+ +DI PFTLDEF +AFHDKDS+L
Sbjct: 347 PNSVQMRMPFGLHPWNSSPESVKKLFKVVHFLYTYSVTLDIGPFTLDEFTRAFHDKDSLL 406
Query: 242 LGKIHVALLTLLLSDIEVELSNGFAPHLDKSCNFLALLHSVESQEYSPDFWRRSLNSLTW 301
LGKIH++LL LLL D+E EL G +L SC FLALL SVESQ D WR SLNSLTW
Sbjct: 407 LGKIHLSLLKLLLLDVETELERGSFSNLSISCKFLALLQSVESQILILDMWRNSLNSLTW 466
Query: 302 IEILRQVLVASGFGSKQGALRREALSKELNLLINYGISPGTLKGELFKILSERGNNGCKV 361
E+LRQ+LVA+G+GS + A++ E LSKE L+ YG+ GTLKGELF++L+ +GNNG K+
Sbjct: 467 TELLRQILVAAGYGSLKCAVQSEELSKERKLMKKYGLRLGTLKGELFRMLNGQGNNGLKI 526
Query: 362 SDLAKATQIAELNLASTTEELESLICSTLSSDITLFEKISSSAYRLRMSTVTKDDDECQS 421
S+LA A ++A LNLA+ EE E+ ICSTL+SDITLFEKIS S YR+R++ ++D D+ QS
Sbjct: 527 SELADAPEVAVLNLATVPEERENSICSTLASDITLFEKISESTYRVRVNCFSEDPDKSQS 586
Query: 422 DMEDYGSVDDELDDSDTCSCGDDFESGSVDSNIRKLKRVKSHKTKSAKLTVFNEIDESHP 481
D +D GSVDDE DD + S GD+ E S + +RK+K K K KS V +EIDESHP
Sbjct: 587 DSDDSGSVDDESDDC-SISSGDEIEHVSENPALRKVKCRKRRKHKSKMREVCSEIDESHP 645
Query: 482 GEVWLLGLMESEYSDLNIEEKLNALAALTDLLSSGSSIRMKDPVKVTADYDSSIQLRGSG 541
GE WLLGLME EYSDL++EEKL+ AL DLLSSGS+IRM+D + AD SI GSG
Sbjct: 646 GEPWLLGLMEGEYSDLSVEEKLDVFVALIDLLSSGSTIRMEDLPRAVADCAPSIYSHGSG 705
Query: 542 AKIKRSVVKK---PVPFWNQFGQMQRVKEGHLNSHPCPVDSSSLMSKFRSHEPSFEKGKG 598
KIKRS + P W G++ +K +S PVDSSS++ F + G
Sbjct: 706 GKIKRSSSNQYSYPRGSWVHGGELYGIKALSKSSDSHPVDSSSIVGAF-----AKLAGNR 760
Query: 599 STDSHPIQSVYLGSDRRYNRYWLFLGPCNADDPGHKRVYFESSEDGHWEVIDTEEALCTL 658
+ + HP+QSVYLGSDRR+NRYWLFLG CNA+DPGH+ V+FESSEDGHWEVI+ +EAL L
Sbjct: 761 ANNVHPMQSVYLGSDRRFNRYWLFLGTCNANDPGHRCVFFESSEDGHWEVINNKEALRAL 820
Query: 659 LSVLDDRGKREALLIESLERRQTSLCRFMSRVKVNGIGTGCMSHSDQSELDMVTEDSNSP 718
LSVLDDRG+REA LIESLE+R++ LC+ M +V T + D+V EDS+SP
Sbjct: 821 LSVLDDRGRREARLIESLEKRESFLCQAMLSRQVTQSETAHFT-------DIVREDSSSP 873
Query: 719 VSDVD-NLNLSDSAKSLPSA--GAVVIEAGKGVEEQVQKWIRVQEYDSWIWNSFYLDLNV 775
VSD+D NL L++ A S+ A+V E G E+ + W +QE+D WIW +F +LN
Sbjct: 874 VSDIDNNLCLNEIANDQFSSQHAAIVFEIGSKREKSLL-WSLIQEFDDWIWANFNFNLNS 932
Query: 776 VKYGRRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKENSK 835
VK+ RRSYLDSL RCKSCHDLYWRDE+HCKICH TFE+D DLEERYAIH ATC KE
Sbjct: 933 VKHRRRSYLDSLTRCKSCHDLYWRDEKHCKICHATFEVDIDLEERYAIHAATCMRKEECD 992
Query: 836 THPNHKVLSSQIQSLKAAIYAIESVMPEDSLVGAWRKSAHKLWVKRLRRTSTLVELVQVL 895
T P+HKVLSSQ+QSLKAA+YAIES MPED+L+GAWRKSAH+LW KRLRR+S++ E+ QV+
Sbjct: 993 TFPDHKVLSSQLQSLKAAVYAIESAMPEDALIGAWRKSAHRLWAKRLRRSSSVSEITQVI 1052
Query: 896 TDFVGAINESWLFQCK-FPDGMVEEIIASFASMPHTSSALALWLVKLDTIIAPYLDRVYL 954
DFVGAINE WL+ C ++ EII F SMP T+SA+ALWLVKLDT+IAPY+++
Sbjct: 1053 GDFVGAINEEWLWHCSDQGQTLMGEIINCFPSMPQTTSAIALWLVKLDTLIAPYVEKAPP 1112
Query: 955 QKKQ 958
++ Q
Sbjct: 1113 ERDQ 1116
>AT5G44180.2 | Symbols: | Homeodomain-like transcriptional
regulator | chr5:17783172-17789872 FORWARD LENGTH=1507
Length = 1507
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 211/452 (46%), Gaps = 105/452 (23%)
Query: 174 KDVLVKYPPDTVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYATVVDICPFTLDEFVQA 233
+D +PP +VK+KKP ++PW+ S E V L V+ F+ T+A V+ + PFTLDEF QA
Sbjct: 488 RDKQAIFPPTSVKLKKPFAVKPWNGSDENVANLLMVWRFLITFADVLGLWPFTLDEFAQA 547
Query: 234 FHDKDSMLLGKIHVALLTLLLSDIE---VELSNGFAPHLDKSCNFLALLHSVESQEYSPD 290
FHD D L+G+IH+ LL ++ DIE LS G + + + N V Y+
Sbjct: 548 FHDYDPRLMGEIHIVLLKTIIKDIEGVVRTLSTGVGANQNVAANPGGGHPHVVEGAYAWG 607
Query: 291 F----WRRSLNSLTWIEILRQVLVASGFGS--KQGALR-------REALSKELNLLIN-- 335
F WR++LN TW EILRQ+ +++G G K+ +R EA + E N++ N
Sbjct: 608 FDIRSWRKNLNVFTWPEILRQLALSAGLGPQLKKMNIRTVSVHDDNEANNSE-NVIFNLR 666
Query: 336 ------------------------YGISPGTLKGELFKILSERGNNGCKVSDLAKATQIA 371
+ ++PGT+K F +LS G G + ++A+ Q +
Sbjct: 667 KGVAAENAFAKMQERGLSNPRRSRHRLTPGTVKFAAFHVLSLEGEKGLNILEVAEKIQKS 726
Query: 372 ELNLASTTEELESLICSTLSSDITLFEKISSSAYRLRMS---------TVTKDDDE---- 418
L +T+ E+ + + LS D LFE+++ S Y +R S T+ + E
Sbjct: 727 GLRDLTTSRTPEASVAAALSRDTKLFERVAPSTYCVRASYRKDAGDAETIFAEARERIRA 786
Query: 419 CQSDMEDYGSVDDELDDSDTCS-CGDD--------------------------FESGSVD 451
+S + D VDD D D+ S G+D E+G +D
Sbjct: 787 FKSGITDVEDVDDAERDEDSESDVGEDPEVDVNLKKEDPNPLKVENLIGVEPLLENGKLD 846
Query: 452 S-----------------NIRKLKRVKSHKTKSAKLTVFNE-----IDESHPGEVWLLGL 489
+ ++ KR + +S + V N DES GE W+ GL
Sbjct: 847 TVPMKTELGLPLTPSLPEEMKDEKRDDTLADQSLEDAVANGEDSACFDESKLGEQWVQGL 906
Query: 490 MESEYSDLNIEEKLNALAALTDLLSSGSSIRM 521
+E +YS+L+ EE+LNAL AL + + G++IR+
Sbjct: 907 VEGDYSNLSSEERLNALVALIGIATEGNTIRI 938
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 606 QSVYLGSDRRYNRYWLFLGPCNADDPGHKRVYFESSEDGHWEVIDTEEA 654
+S+ LG DRR NRYW F + +DPG R++ E +DG W +ID+EEA
Sbjct: 1072 RSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVE-LQDGRWRLIDSEEA 1119
>AT5G44180.1 | Symbols: | Homeodomain-like transcriptional
regulator | chr5:17783172-17789872 FORWARD LENGTH=1694
Length = 1694
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 211/452 (46%), Gaps = 105/452 (23%)
Query: 174 KDVLVKYPPDTVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYATVVDICPFTLDEFVQA 233
+D +PP +VK+KKP ++PW+ S E V L V+ F+ T+A V+ + PFTLDEF QA
Sbjct: 488 RDKQAIFPPTSVKLKKPFAVKPWNGSDENVANLLMVWRFLITFADVLGLWPFTLDEFAQA 547
Query: 234 FHDKDSMLLGKIHVALLTLLLSDIE---VELSNGFAPHLDKSCNFLALLHSVESQEYSPD 290
FHD D L+G+IH+ LL ++ DIE LS G + + + N V Y+
Sbjct: 548 FHDYDPRLMGEIHIVLLKTIIKDIEGVVRTLSTGVGANQNVAANPGGGHPHVVEGAYAWG 607
Query: 291 F----WRRSLNSLTWIEILRQVLVASGFGS--KQGALR-------REALSKELNLLIN-- 335
F WR++LN TW EILRQ+ +++G G K+ +R EA + E N++ N
Sbjct: 608 FDIRSWRKNLNVFTWPEILRQLALSAGLGPQLKKMNIRTVSVHDDNEANNSE-NVIFNLR 666
Query: 336 ------------------------YGISPGTLKGELFKILSERGNNGCKVSDLAKATQIA 371
+ ++PGT+K F +LS G G + ++A+ Q +
Sbjct: 667 KGVAAENAFAKMQERGLSNPRRSRHRLTPGTVKFAAFHVLSLEGEKGLNILEVAEKIQKS 726
Query: 372 ELNLASTTEELESLICSTLSSDITLFEKISSSAYRLRMS---------TVTKDDDE---- 418
L +T+ E+ + + LS D LFE+++ S Y +R S T+ + E
Sbjct: 727 GLRDLTTSRTPEASVAAALSRDTKLFERVAPSTYCVRASYRKDAGDAETIFAEARERIRA 786
Query: 419 CQSDMEDYGSVDDELDDSDTCS-CGDD--------------------------FESGSVD 451
+S + D VDD D D+ S G+D E+G +D
Sbjct: 787 FKSGITDVEDVDDAERDEDSESDVGEDPEVDVNLKKEDPNPLKVENLIGVEPLLENGKLD 846
Query: 452 S-----------------NIRKLKRVKSHKTKSAKLTVFNE-----IDESHPGEVWLLGL 489
+ ++ KR + +S + V N DES GE W+ GL
Sbjct: 847 TVPMKTELGLPLTPSLPEEMKDEKRDDTLADQSLEDAVANGEDSACFDESKLGEQWVQGL 906
Query: 490 MESEYSDLNIEEKLNALAALTDLLSSGSSIRM 521
+E +YS+L+ EE+LNAL AL + + G++IR+
Sbjct: 907 VEGDYSNLSSEERLNALVALIGIATEGNTIRI 938
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 152/361 (42%), Gaps = 49/361 (13%)
Query: 606 QSVYLGSDRRYNRYWLFLGPCNADDPGHKRVYFESSEDGHWEVIDTEEALCTLLSVLDDR 665
+S+ LG DRR NRYW F + +DPG R++ E +DG W +ID+EEA L+ LD R
Sbjct: 1072 RSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVE-LQDGRWRLIDSEEAFDYLVKSLDVR 1130
Query: 666 GKREALLIESLERRQTSLCRFMSRVKVNGIGTGCMSHSDQSELDMVTEDSNSPVSDVDNL 725
G RE+ L L + + S + R G +S S LD T + +S +
Sbjct: 1131 GVRESHLHFMLLKIEASFKEALRRNVAANPGVCSISSS----LDSDTAE----ISTTFKI 1182
Query: 726 NLSDSAKSLPSAGAVVIEAGKGVEEQVQKWIRVQEYDSWIWNSFYLD--LNVVKYGRRSY 783
L DS AV E+ R ++ W+W++ L+ KYG +
Sbjct: 1183 ELGDS-------NAV---------ERCSVLQRFHSFEKWMWDNMLHPSALSAFKYGAKQS 1226
Query: 784 LDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKENSKTHPNHKVL 843
C+ C +L++ + C C E +A +A +N + +L
Sbjct: 1227 SPLFRICRICAELHFVGDICCPSCGQMHAGPDVGELCFAEQVAQL--GDNLRRGDTGFIL 1284
Query: 844 SSQIQS------LKAAIYAIESVMPEDSLVGAWRKSAHKLWVKRLRRTSTLVELVQVLTD 897
S I S LK + +E+ +P + L W ++ K W +L +S+ +L QVLT
Sbjct: 1285 RSSILSPLRIRLLKVQLALVEASLPPEGLEAFWTENLRKSWGMKLLSSSSHEDLYQVLTT 1344
Query: 898 FVGAINESWLFQCKFPD-----GMVEEIIAS--------FASMPHTSSALALWLVKLDTI 944
A+ +L F G+ E +AS +P T+ +AL L D+
Sbjct: 1345 LEAALKRDFL-SSNFETTSELLGLQEGALASDLTCGVNVLPWIPKTAGGVALRLFDFDSS 1403
Query: 945 I 945
I
Sbjct: 1404 I 1404
>AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460
FORWARD LENGTH=1705
Length = 1705
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 141/285 (49%), Gaps = 41/285 (14%)
Query: 174 KDVLVKYPPDTVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYATVVDICPFTLDEFVQA 233
+D L +PP ++++K P + PW S E V L V+ F+ +++ V+D+ PFTLDEF+QA
Sbjct: 523 RDSLSTFPPKSLQLKMPFAISPWKDSDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQA 582
Query: 234 FHDKDSMLLGKIHVALLTLLLSDIEVELS---NGFAPHLDKSCNFLALLHSVESQEYSPD 290
FHD DS LLG+IHV LL ++ D+E +G + + N + Y+
Sbjct: 583 FHDYDSRLLGEIHVTLLRSIIRDVEDVARTPFSGIGNNQYTTANPEGGHPQIVEGAYAWG 642
Query: 291 F----WRRSLNSLTWIEILRQVLVASGFGSK----------------------------Q 318
F W++ LN LTW EILRQ+ +++GFG K
Sbjct: 643 FDIRSWKKHLNPLTWPEILRQLALSAGFGPKLKKKHSRLTNTGDKDEAKGCEDVISTIRN 702
Query: 319 GALRREALS--KELNLLI----NYGISPGTLKGELFKILSERGNNGCKVSDLAKATQIAE 372
G A + +E LL + ++PGT+K F +LS G+ G V +LA Q +
Sbjct: 703 GTAAESAFASMREKGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSG 762
Query: 373 LNLASTTEELESLICSTLSSDITLFEKISSSAYRLRMSTVTKDDD 417
L +T++ E+ I L+ D+ LFE+I+ S Y +R V D
Sbjct: 763 LRDLTTSKTPEASISVALTRDVKLFERIAPSTYCVRAPYVKDPKD 807
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 223/527 (42%), Gaps = 81/527 (15%)
Query: 476 IDESHPGEVWLLGLMESEYSDLNIEEKLNALAA--------------LTDLLSSGSSIR- 520
IDES+ G+ W+ GL E +Y L++EE+LNAL A L D + + ++++
Sbjct: 927 IDESNQGQSWIQGLTEGDYCHLSVEERLNALVALVGIANEGNSIRTGLEDRMEAANALKK 986
Query: 521 ------------MKDPVKV------TADYDSSIQLR--GSGAKIKRSVVKKPVPFWNQFG 560
M+D +K+ ++ +S+I L S + + S + P ++
Sbjct: 987 QMWAEAQLDNSCMRDVLKLDLQNLASSKTESTIGLPIIQSSTRERDSFDRDPSQLLDETK 1046
Query: 561 QMQRVK--------EGHLNSHPCPVDSSSLMSKFRSHEPSFEKGKGSTDSHPIQSVYLGS 612
++ + E L + + + SK + G + + +P +S+ LG
Sbjct: 1047 PLEDLSNDLHKSSAERALINQDANISQENYASKRSRSQLKSYIGHKAEEVYPYRSLPLGQ 1106
Query: 613 DRRYNRYWLFLGPCNADDPGHKRVYFESSEDGHWEVIDTEEALCTLLSVLDDRGKREALL 672
DRR+NRYW F + DP R+ F DG W +ID+EEA L++ LD RG RE+ L
Sbjct: 1107 DRRHNRYWHFAVSVSKSDPC-SRLLFVELHDGKWLLIDSEEAFDILVASLDMRGIRESHL 1165
Query: 673 IESLERRQTSLCRFMSRVKVNGIGTGCMSHSD-QSELDMVTEDSNSPVSDVDNLNLSDSA 731
L++ + S K N ++ + +E +V VS + ++
Sbjct: 1166 RIMLQKIEGSF-------KENACKDIKLARNPFLTEKSVVNHSPTDSVSPSSSAISGSNS 1218
Query: 732 KSLPSAGAVVIEAGKGVEEQVQKWIRVQEYDSWIWNSFYLDLN--VVKYGR-RSYLDSLA 788
S+ ++ ++ ++ G+ E R ++ W+W Y L KYG+ RS L LA
Sbjct: 1219 DSMETSTSIRVDLGRNDTENKNLSKRFHDFQRWMWTETYSSLPSCARKYGKKRSEL--LA 1276
Query: 789 RCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKENSKTHPNHKVLSSQIQ 848
C +C Y + C CH ++ D E +A L ++
Sbjct: 1277 TCDACVASYLSEYTFCSSCHQRLDV-VDSSEILDSGLAVS-------------PLPFGVR 1322
Query: 849 SLKAAIYAIESVMPEDSLVGAWRKSAHKLWVKRLRRTSTLVELVQVLTDFVGAINES--- 905
LK + +E+ +P+++L W + K W RL +S+ EL+QVLT AI +
Sbjct: 1323 LLKPLLVFLEASVPDEALESFWTEDQRKKWGFRLNTSSSPGELLQVLTSLESAIKKESLS 1382
Query: 906 -------WLFQCKFPDGMVEEIIASFASMPHTSSALALWLVKLDTII 945
L + + + +P T SA+AL L +LD I
Sbjct: 1383 SNFMSAKELLGAANAEADDQGSVDVLPWIPKTVSAVALRLSELDASI 1429