Miyakogusa Predicted Gene
- Lj4g3v3014430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3014430.1 Non Chatacterized Hit- tr|I1KPM9|I1KPM9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24005
PE,86.46,0,TPR_12,NULL; TPR_2,Tetratricopeptide TPR2; seg,NULL;
Tetratricopeptide repeats,Tetratricopeptide rep,CUFF.52102.1
(589 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 921 0.0
AT4G10840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 804 0.0
AT1G27500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 642 0.0
AT3G27960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 639 0.0
AT2G31240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 8e-43
>AT4G10840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:6656614-6659033 FORWARD
LENGTH=609
Length = 609
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/613 (75%), Positives = 513/613 (83%), Gaps = 31/613 (5%)
Query: 1 MPGLVK------TPPLRITMPQTQ-------TPTRRSEPAATNNXXXXXXXXXXXXXXXX 47
MPGLV TPPLR+ +P TQ TP +++ P++T +
Sbjct: 4 MPGLVSVKTPSDTPPLRVAVPDTQPLSNPPRTPMKKT-PSSTPSRSKPSPNRSTGKKDSP 62
Query: 48 XXXXXXXXXXXXETPTNPDASLDNPDLGPFLLKLARDTIASGEGPTKALDYAIRASKSFE 107
+ P SLDNPDLGPFLLKLARD IASGEGP KALDYAIRA+KSFE
Sbjct: 63 TVSSSTAAVIDVDDP-----SLDNPDLGPFLLKLARDAIASGEGPNKALDYAIRATKSFE 117
Query: 108 ICAA----------DGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGAD 157
C A DG P LDLAMSLHVLAAIYCSLGRF+EAVP LERAIQVPD RG D
Sbjct: 118 RCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCSLGRFDEAVPPLERAIQVPDPTRGPD 177
Query: 158 HALAAFSGHMQLGDTFSMLGHVDKSISCYDQGLQIQIQTLCDTDPRVGETCRYLAEANVQ 217
H+LAAFSGHMQLGDT SMLG +D+SI+CY++GL+IQIQTL DTDPRVGETCRYLAEA VQ
Sbjct: 178 HSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKIQIQTLGDTDPRVGETCRYLAEAYVQ 237
Query: 218 AMQFDRAEELCKTTLEIHRAHSEPASLEEAADRRLMALICEAKGDYEAALEHLVLASMAM 277
AMQF++AEELCK TLEIHRAHSEPASLEEAADRRLMA+ICEAKGDYE ALEHLVLASMAM
Sbjct: 238 AMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRLMAIICEAKGDYENALEHLVLASMAM 297
Query: 278 IANGQDNEVASIDVSIGNMYMSLCRFDEAIFSYQKALTVFKASKGENHPSVASVFVRLAD 337
IA+GQ++EVASIDVSIGN+YMSLCRFDEA+FSYQKALTVFKASKGE HP+VASVFVRLA+
Sbjct: 298 IASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQKALTVFKASKGETHPTVASVFVRLAE 357
Query: 338 LYHRTGKLRESKSYCENAMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQR 397
LYHRTGKLRESKSYCENA+RIY+KPVPGTT EEIAGGLTE+SAI+ESVDEPEEALKLLQ+
Sbjct: 358 LYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIAGGLTEISAIYESVDEPEEALKLLQK 417
Query: 398 AMKLLEEKPGQQSTVAGIEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVV 457
+MKLLE+KPGQQS +AG+EARMGVMYY GRYEDAR++FESAV KLRA+GE KSAFFGVV
Sbjct: 418 SMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDARNAFESAVTKLRAAGE-KSAFFGVV 476
Query: 458 LNQMGLACVQLFKIDEAAELFEEARTILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAI 517
LNQMGLACVQLFKIDEA ELFEEAR ILEQE GPC QDTLGVYSNLAATYDAMGR+ DAI
Sbjct: 477 LNQMGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNLAATYDAMGRIEDAI 536
Query: 518 EILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPNSKRTKKE 577
EILE VLKLREEKLG ANPDFEDEK+RLAELLKEAG++R+ KAKSL+NLIDPN++ KKE
Sbjct: 537 EILEQVLKLREEKLGTANPDFEDEKKRLAELLKEAGRSRNYKAKSLQNLIDPNARPPKKE 596
Query: 578 GN-KRWPGLGFRI 589
+ K+WP LGF+
Sbjct: 597 SSAKKWPSLGFKF 609
>AT4G10840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:6656614-6658702 FORWARD
LENGTH=531
Length = 531
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/535 (75%), Positives = 445/535 (83%), Gaps = 30/535 (5%)
Query: 1 MPGLVK------TPPLRITMPQTQ-------TPTRRSEPAATNNXXXXXXXXXXXXXXXX 47
MPGLV TPPLR+ +P TQ TP +++ P++T +
Sbjct: 4 MPGLVSVKTPSDTPPLRVAVPDTQPLSNPPRTPMKKT-PSSTPSRSKPSPNRSTGKKDSP 62
Query: 48 XXXXXXXXXXXXETPTNPDASLDNPDLGPFLLKLARDTIASGEGPTKALDYAIRASKSFE 107
+ P SLDNPDLGPFLLKLARD IASGEGP KALDYAIRA+KSFE
Sbjct: 63 TVSSSTAAVIDVDDP-----SLDNPDLGPFLLKLARDAIASGEGPNKALDYAIRATKSFE 117
Query: 108 ICAA----------DGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGAD 157
C A DG P LDLAMSLHVLAAIYCSLGRF+EAVP LERAIQVPD RG D
Sbjct: 118 RCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCSLGRFDEAVPPLERAIQVPDPTRGPD 177
Query: 158 HALAAFSGHMQLGDTFSMLGHVDKSISCYDQGLQIQIQTLCDTDPRVGETCRYLAEANVQ 217
H+LAAFSGHMQLGDT SMLG +D+SI+CY++GL+IQIQTL DTDPRVGETCRYLAEA VQ
Sbjct: 178 HSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKIQIQTLGDTDPRVGETCRYLAEAYVQ 237
Query: 218 AMQFDRAEELCKTTLEIHRAHSEPASLEEAADRRLMALICEAKGDYEAALEHLVLASMAM 277
AMQF++AEELCK TLEIHRAHSEPASLEEAADRRLMA+ICEAKGDYE ALEHLVLASMAM
Sbjct: 238 AMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRLMAIICEAKGDYENALEHLVLASMAM 297
Query: 278 IANGQDNEVASIDVSIGNMYMSLCRFDEAIFSYQKALTVFKASKGENHPSVASVFVRLAD 337
IA+GQ++EVASIDVSIGN+YMSLCRFDEA+FSYQKALTVFKASKGE HP+VASVFVRLA+
Sbjct: 298 IASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQKALTVFKASKGETHPTVASVFVRLAE 357
Query: 338 LYHRTGKLRESKSYCENAMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQR 397
LYHRTGKLRESKSYCENA+RIY+KPVPGTT EEIAGGLTE+SAI+ESVDEPEEALKLLQ+
Sbjct: 358 LYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIAGGLTEISAIYESVDEPEEALKLLQK 417
Query: 398 AMKLLEEKPGQQSTVAGIEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVV 457
+MKLLE+KPGQQS +AG+EARMGVMYY GRYEDAR++FESAV KLRA+GE KSAFFGVV
Sbjct: 418 SMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDARNAFESAVTKLRAAGE-KSAFFGVV 476
Query: 458 LNQMGLACVQLFKIDEAAELFEEARTILEQECGPCHQDTLGVYSNLAATYDAMGR 512
LNQMGLACVQLFKIDEA ELFEEAR ILEQE GPC QDTLGVYSNLAATYDAMGR
Sbjct: 477 LNQMGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNLAATYDAMGR 531
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 281 GQDNEVASID--VSIGNMYMSLCRFDEAIFSYQKALTVFKASKGENHPSVASVFVRLADL 338
G D+ +A+ + +G+ L + D +I Y++ L + + G+ P V LA+
Sbjct: 175 GPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKIQIQTLGDTDPRVGETCRYLAEA 234
Query: 339 YHRTGKLRESKSYCENAMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALK-LLQR 397
Y + + +++ C+ + I+ + EE A ++ I E+ + E AL+ L+
Sbjct: 235 YVQAMQFNKAEELCKKTLEIHRAHSEPASLEE-AADRRLMAIICEAKGDYENALEHLVLA 293
Query: 398 AMKLLEEKPGQQSTVAGIEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVV 457
+M ++ GQ+S VA I+ +G +Y R+++A S++ A+ +AS V
Sbjct: 294 SMAMIAS--GQESEVASIDVSIGNIYMSLCRFDEAVFSYQKALTVFKASKGETHPTVASV 351
Query: 458 LNQMGLACVQLFKIDEAAELFEEARTILEQEC-GPCHQDTLGVYSNLAATYDAMGRVGDA 516
++ + K+ E+ E A I + G ++ G + ++A Y+++ +A
Sbjct: 352 FVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIAGGLTEISAIYESVDEPEEA 411
Query: 517 IEILEYVLKLREEKLG 532
+++L+ +KL E+K G
Sbjct: 412 LKLLQKSMKLLEDKPG 427
>AT1G27500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9551629-9553654 REVERSE
LENGTH=650
Length = 650
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/507 (59%), Positives = 400/507 (78%)
Query: 64 NPDASLDNPDLGPFLLKLARDTIASGEGPTKALDYAIRASKSFEICAADGEPSLDLAMSL 123
N + S +N +L FLL AR+ ++SG+ KAL+ RA+K FE A +G+P L+ M L
Sbjct: 136 NEEPSSENVELARFLLNQARNLVSSGDSTHKALELTHRAAKLFEASAENGKPCLEWIMCL 195
Query: 124 HVLAAIYCSLGRFEEAVPVLERAIQVPDVARGADHALAAFSGHMQLGDTFSMLGHVDKSI 183
HV AA++C L + EA+PVL+R++++P V G +HALA F+G MQLGDT++M+G ++ SI
Sbjct: 196 HVTAAVHCKLKEYNEAIPVLQRSVEIPVVEEGEEHALAKFAGLMQLGDTYAMVGQLESSI 255
Query: 184 SCYDQGLQIQIQTLCDTDPRVGETCRYLAEANVQAMQFDRAEELCKTTLEIHRAHSEPAS 243
SCY +GL IQ + L + DPRVGETCRYLAEA VQA++FD A+++C+T L IHR P S
Sbjct: 256 SCYTEGLNIQKKVLGENDPRVGETCRYLAEALVQALRFDEAQQVCETALSIHRESGLPGS 315
Query: 244 LEEAADRRLMALICEAKGDYEAALEHLVLASMAMIANGQDNEVASIDVSIGNMYMSLCRF 303
+ EAADRRLM LICE KGD+E ALEHLVLASMAM ANGQ++EVA +D SIG+ Y+SL RF
Sbjct: 316 IAEAADRRLMGLICETKGDHENALEHLVLASMAMAANGQESEVAFVDTSIGDSYLSLSRF 375
Query: 304 DEAIFSYQKALTVFKASKGENHPSVASVFVRLADLYHRTGKLRESKSYCENAMRIYSKPV 363
DEAI +YQK+LT K +KGENHP+V SV++RLADLY+RTGK+RE+KSYCENA+RIY
Sbjct: 376 DEAICAYQKSLTALKTAKGENHPAVGSVYIRLADLYNRTGKVREAKSYCENALRIYESHN 435
Query: 364 PGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQRAMKLLEEKPGQQSTVAGIEARMGVMY 423
+PEEIA GLT++S I ES++E E+A+ LLQ+A+K+ + PGQ+ +AGIEA+MGV+Y
Sbjct: 436 LEISPEEIASGLTDISVICESMNEVEQAITLLQKALKIYADSPGQKIMIAGIEAQMGVLY 495
Query: 424 YMTGRYEDARSSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEART 483
YM G+Y ++ ++F+SA++KLRA+G+++S FFG+ LNQMGLAC+QL I+EA ELFEEA+
Sbjct: 496 YMMGKYMESYNTFKSAISKLRATGKKQSTFFGIALNQMGLACIQLDAIEEAVELFEEAKC 555
Query: 484 ILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKR 543
ILEQECGP H +TLG+YSNLA YDA+GR+ DAI++L +V+ +REEKLG ANP EDEKR
Sbjct: 556 ILEQECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLLGHVVGVREEKLGTANPVTEDEKR 615
Query: 544 RLAELLKEAGKTRDRKAKSLENLIDPN 570
RLA+LLKEAG RKAKSL+ LID +
Sbjct: 616 RLAQLLKEAGNVTGRKAKSLKTLIDSD 642
>AT3G27960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10380513-10382593 REVERSE
LENGTH=663
Length = 663
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/504 (61%), Positives = 394/504 (78%), Gaps = 3/504 (0%)
Query: 70 DNPDLGPFLLKLARDTIASGEGPTKALDYAIRASKSFEICA-ADGEPSLDLAMSLHVLAA 128
++P+LG LLK AR+ ++SGE KALD A+RA K FE C + + L+L MSLH+LAA
Sbjct: 149 ESPELGVVLLKQARELVSSGENLNKALDLALRAVKVFEKCGEGEKQLGLNLVMSLHILAA 208
Query: 129 IYCSLGRFEEAVPVLERAIQVPDVARGADHALAAFSGHMQLGDTFSMLGHVDKSISCYDQ 188
IY LGR+ +AVPVLER+I++P + G DHALA F+G MQLGD + ++G V+ SI Y
Sbjct: 209 IYAGLGRYNDAVPVLERSIEIPMIEDGEDHALAKFAGCMQLGDMYGLMGQVENSIMLYTA 268
Query: 189 GLQIQIQTLCDTDPRVGETCRYLAEANVQAMQFDRAEELCKTTLEIHRAH--SEPASLEE 246
GL+IQ Q L ++D RVGETCRYLAEA+VQAMQF+ A LC+ L+IH+ + + AS+EE
Sbjct: 269 GLEIQRQVLGESDARVGETCRYLAEAHVQAMQFEEASRLCQMALDIHKENGAAATASIEE 328
Query: 247 AADRRLMALICEAKGDYEAALEHLVLASMAMIANGQDNEVASIDVSIGNMYMSLCRFDEA 306
AADR+LM LIC+AKGDYE ALEH VLASMAM + +VA++D SIG+ YMSL RFDEA
Sbjct: 329 AADRKLMGLICDAKGDYEVALEHYVLASMAMSSQNHREDVAAVDCSIGDAYMSLARFDEA 388
Query: 307 IFSYQKALTVFKASKGENHPSVASVFVRLADLYHRTGKLRESKSYCENAMRIYSKPVPGT 366
IF+YQKAL VFK KGE H SVA V+VRLADLY++ GK R+SKSYCENA++IY KP PGT
Sbjct: 389 IFAYQKALAVFKQGKGETHSSVALVYVRLADLYNKIGKTRDSKSYCENALKIYLKPTPGT 448
Query: 367 TPEEIAGGLTEVSAIFESVDEPEEALKLLQRAMKLLEEKPGQQSTVAGIEARMGVMYYMT 426
EE+A G E+SAI++S++E ++ALKLL+RA+K+ PGQQ+T+AGIEA+MGV+ YM
Sbjct: 449 PMEEVATGFIEISAIYQSMNELDQALKLLRRALKIYANAPGQQNTIAGIEAQMGVVTYMM 508
Query: 427 GRYEDARSSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARTILE 486
G Y ++ F+SA++K R SGE+K+A FG+ LNQMGLACVQ + I+EAA+LFEEA+TILE
Sbjct: 509 GNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLACVQRYAINEAADLFEEAKTILE 568
Query: 487 QECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLA 546
+ECGP H DTL VYSNLA TYDAMGR+ DAIEILEYV+ REEKLG ANP+ EDEK+RLA
Sbjct: 569 KECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVGTREEKLGTANPEVEDEKQRLA 628
Query: 547 ELLKEAGKTRDRKAKSLENLIDPN 570
LLKEAG+ R ++ ++L L+D N
Sbjct: 629 ALLKEAGRGRSKRNRALLTLLDNN 652
>AT2G31240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13317570-13319518 REVERSE
LENGTH=617
Length = 617
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 233/494 (47%), Gaps = 27/494 (5%)
Query: 68 SLDNPDLGPFLLKLARDTIASGEGPTKALDYAIRASKSFEICAADG-EPSLDLAMSLHVL 126
S + +LG LKL GE P K L YA +A KSF+ DG +P+L +AM+ ++
Sbjct: 111 SFEGNELGLSALKLGLHLDREGEDPEKVLSYADKALKSFD---GDGNKPNLLVAMASQLM 167
Query: 127 AAIYCSLGRFEEAVPVLERAIQ------------VPDVARGADHALAAFSGHMQLGDTFS 174
+ L RF +++ L RA + V DV R HA+ ++L + +
Sbjct: 168 GSANYGLKRFSDSLGYLNRANRILVKLEADGDCVVEDV-RPVLHAV-----QLELANVKN 221
Query: 175 MLGHVDKSISCYDQGLQIQIQTLCDTDPRVGETCRYLAEANVQAMQFDRAEELCKTTLEI 234
+G +++I + L+I+ T + +G R LA+A V + F+ A LEI
Sbjct: 222 AMGRREEAIENLKKSLEIKEMTFDEDSKEMGVANRSLADAYVAVLNFNEALPYALKALEI 281
Query: 235 HRAHSEPASLEEAADRRLMALICEAKGDYEAALEHLVLASMAMIANGQDNEVASIDVSIG 294
H+ S E A DRRL+ +I ++ ALE L+ + G E+ ++
Sbjct: 282 HKKELGNNSAEVAQDRRLLGVIYSGLEQHDKALEQNRLSQRVLKNWGMKLELIRAEIDAA 341
Query: 295 NMYMSLCRFDEAIFSYQKALTVFKASKGENHPSVASVFVRLADLYHRTGKLRESKSYCEN 354
NM ++L +++EAI L ++ A VF+ ++ K ESK E
Sbjct: 342 NMKVALGKYEEAI----DILKSVVQQTDKDSEMRAMVFISMSKALVNQQKFAESKRCLEF 397
Query: 355 AMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQRAMKLLEEKPGQQSTVAG 414
A I K P E+A +EV+ +ES++E E A+ LLQ+ + +LE+ P +Q +
Sbjct: 398 ACEILEKK-ETALPVEVAEAYSEVAMQYESMNEFETAISLLQKTLGILEKLPQEQHSEGS 456
Query: 415 IEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEA 474
+ AR+G + +GR A ESA +L+ S K G V N +G A ++L + A
Sbjct: 457 VSARIGWLLLFSGRVSQAVPYLESAAERLKESFGAKHFGVGYVYNNLGAAYLELGRPQSA 516
Query: 475 AELFEEARTILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIA 534
A++F A+ I++ GP H D++ NL+ Y MG A+E + V+ + A
Sbjct: 517 AQMFAVAKDIMDVSLGPNHVDSIDACQNLSKAYAGMGNYSLAVEFQQRVINAWDNHGDSA 576
Query: 535 NPDFEDEKRRLAEL 548
+ ++ KR L +L
Sbjct: 577 KDEMKEAKRLLEDL 590