Miyakogusa Predicted Gene
- Lj4g3v3014320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3014320.1 Non Chatacterized Hit- tr|K4C776|K4C776_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,45.65,2e-18,RING/U-box,NULL; seg,NULL; zf-RING_2,Zinc finger,
RING-type; ZF_RING_2,Zinc finger, RING-type; Ring ,CUFF.52048.1
(215 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 127 7e-30
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 90 1e-18
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 88 3e-18
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 87 1e-17
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 73 1e-13
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 73 1e-13
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 7e-13
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 71 7e-13
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 70 1e-12
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 69 2e-12
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 2e-12
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 2e-12
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 69 2e-12
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 2e-12
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 3e-12
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 68 6e-12
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 7e-12
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 7e-12
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 67 7e-12
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 67 9e-12
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 67 1e-11
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 1e-11
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 67 1e-11
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 1e-11
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 66 2e-11
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 66 2e-11
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 66 2e-11
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 66 2e-11
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 2e-11
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 3e-11
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 3e-11
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 3e-11
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 3e-11
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 3e-11
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 4e-11
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 65 4e-11
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 65 5e-11
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 64 5e-11
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 64 6e-11
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 6e-11
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 64 7e-11
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 64 7e-11
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 1e-10
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 63 1e-10
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 2e-10
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 2e-10
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 2e-10
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 2e-10
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 2e-10
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 2e-10
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 2e-10
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 3e-10
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 3e-10
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 62 3e-10
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 3e-10
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 4e-10
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 4e-10
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 61 4e-10
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 61 5e-10
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 61 5e-10
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 61 5e-10
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 61 5e-10
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 61 6e-10
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 7e-10
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 60 7e-10
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 7e-10
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 60 9e-10
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 9e-10
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 60 1e-09
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 60 1e-09
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 1e-09
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 2e-09
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 59 2e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 2e-09
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 2e-09
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 3e-09
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 3e-09
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 3e-09
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 3e-09
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 58 4e-09
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 4e-09
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 58 4e-09
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 4e-09
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 5e-09
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 58 5e-09
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 58 5e-09
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 58 5e-09
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 5e-09
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 6e-09
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 6e-09
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 7e-09
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 57 7e-09
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 8e-09
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 9e-09
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 1e-08
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 1e-08
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-08
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 2e-08
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 2e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 56 2e-08
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 2e-08
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 56 2e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 2e-08
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 3e-08
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 3e-08
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 3e-08
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 3e-08
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 4e-08
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 4e-08
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 55 4e-08
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 5e-08
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 5e-08
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 5e-08
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-08
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-08
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 6e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 6e-08
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 54 6e-08
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 7e-08
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 54 8e-08
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 8e-08
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 54 8e-08
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 9e-08
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 9e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 54 1e-07
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 53 1e-07
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 1e-07
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 53 1e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 53 2e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 53 2e-07
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 2e-07
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 52 2e-07
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-07
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-07
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 3e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 52 3e-07
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 52 3e-07
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 4e-07
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 4e-07
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 5e-07
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 6e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 6e-07
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 7e-07
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 50 8e-07
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 8e-07
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 8e-07
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 9e-07
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 9e-07
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 9e-07
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 50 1e-06
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 1e-06
AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 1e-06
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 1e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT1G24580.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 49 2e-06
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 49 3e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 4e-06
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 48 5e-06
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 48 5e-06
AT1G67856.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 5e-06
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 6e-06
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 6e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 7e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 47 7e-06
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 9e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 47 9e-06
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 8 NPSPPHKYPQELQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRAXXXXXXXXXXXXXIT 67
+P PH YPQ +QLKLYQA KRRA
Sbjct: 6 SPITPHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILP--V 63
Query: 68 ANPHQTSYRYRSSSPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQI 127
++ HQTS S C L++ V++ DKL VLF+E+L TRDS+CCVCLGEFELKEEL+++
Sbjct: 64 SSSHQTSSHLPSV--CLLDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEM 121
Query: 128 PYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
P CKH+FH++CI WL S++TCPLCR S+
Sbjct: 122 PLCKHIFHLDCIHLWLYSHNTCPLCRSSV 150
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 81 SPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECID 140
S L L+ I + LP V++ E +DS C VCLG+++ +E+L Q+P C H FH+ECID
Sbjct: 81 STAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECID 140
Query: 141 NWLQSNSTCPLCRCSIIP 158
WL S++TCPLCR S+IP
Sbjct: 141 LWLTSHTTCPLCRLSLIP 158
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%)
Query: 79 SSSPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIEC 138
S S L L+ ++ + LP V+F E DS C VCLG+++ ++L QIP CKH FH++C
Sbjct: 68 SLSTIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 127
Query: 139 IDNWLQSNSTCPLCRCSIIPT 159
ID WL S++TCPLCR ++IP+
Sbjct: 128 IDLWLTSHTTCPLCRLALIPS 148
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 81 SPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECID 140
S L L+ I + LP V++ E D+ C VCLG+++ +E+L Q+P C H FH+ECID
Sbjct: 67 STAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECID 126
Query: 141 NWLQSNSTCPLCRCSIIP 158
WL S++TCPLCR S+IP
Sbjct: 127 LWLTSHTTCPLCRLSLIP 144
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 84 RLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
R L Q + LP + + + R+ C +CL +FE E + IP+C H+FH++C+D WL
Sbjct: 113 RRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWL 172
Query: 144 QSNSTCPLCRCSIIPTSKFLNPPPLVVQDPPHQGA 178
S TCPLCR +++ + L +Q+PP Q +
Sbjct: 173 SSYVTCPLCR-----SNQLFSDKDLGMQEPPDQDS 202
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 86 NLAVQILDKLPRVLFDEDLR-TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQ 144
L + P++L+ E T S C +CLG+++ K L Q+P C H+FH++CID WL+
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 145 SNSTCPLCRCSIIPT 159
N TCP+CR S +PT
Sbjct: 181 LNPTCPVCRTSPLPT 195
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 91 ILDKLPRVLFDEDLRTRDSV-CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
++D LP L+ E T++ C VCL EF ++L +P C H FHI+CID WL SNSTC
Sbjct: 123 LIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTC 182
Query: 150 PLCRCSII 157
PLCR ++
Sbjct: 183 PLCRGTLF 190
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 77 YRSSSPCRLNLAVQILDKLPRVLFDEDLR---TRDSVCCVCLGEFELKEELLQIPYCKHM 133
Y SS + L ++ P+++ E R D+ C +CL E+E KE L IP C+H
Sbjct: 293 YLHSSVIVMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHC 352
Query: 134 FHIECIDNWLQSNSTCPLCRCS 155
FH +CID WL+ N TCP+CR S
Sbjct: 353 FHADCIDEWLKLNGTCPVCRNS 374
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 107 RDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPP 166
R C VCL EF+ +E+L IP C H+FHI+CID WLQ+N+ CPLCR + + F P
Sbjct: 134 RSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF---P 190
Query: 167 PLVVQDPPHQGAXXXXXXXXXXXXXXQLGGEAGA 200
P V P +LG G+
Sbjct: 191 PDRVSAPSTSPENLVMLRGENEYVVIELGSSIGS 224
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 91 ILDKLPRVLFDEDLRTRDS---VCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS 147
+L+K+P +F ++T +S C VCL EFE +E +P C H+FH++CID W +S S
Sbjct: 92 VLEKIP--IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS 149
Query: 148 TCPLCRCSIIPTSKFLNPPPLVVQDP 173
+CPLCR + P P P+ P
Sbjct: 150 SCPLCRAPVQPAQPVTEPEPVAAVFP 175
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
C VCL EF K++L +P C H FH+ CID WLQSNSTCPLCR ++
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLF 189
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT---SKFLNPPP 167
C VCL EFE E L IP C H+FH CID WL+S++TCPLCR +IP S P
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSIQIP 203
Query: 168 LVVQDPP 174
+V DPP
Sbjct: 204 GLVNDPP 210
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 91 ILDKLPRVLFDEDLRTRDSV-CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+++ LP F +D + C VCL FE E L +P CKH FH+EC+D WL ++STC
Sbjct: 71 VIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTC 130
Query: 150 PLCRCSIIPTSKFL 163
PLCR + P L
Sbjct: 131 PLCRYRVDPEDILL 144
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 98 VLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
V +ED C VCL EF+ E+L IP C H+FHI+CID WLQ N+ CPLCR S+
Sbjct: 121 VAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVS 180
Query: 158 PTSKF----LNPPPLVVQDPPH 175
+ F ++ P ++ PH
Sbjct: 181 CEASFTLDLISAPSSPRENSPH 202
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 104 LRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
LR S C VCL EF ++EL +P C H FH+ECID WL +NSTCPLCR
Sbjct: 115 LRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPPLVV 170
C VCL EFE E L +P C H FH+ CID WL S+ CPLCR P L++
Sbjct: 135 CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR-----------APVLLI 183
Query: 171 QDPPHQ 176
+PPHQ
Sbjct: 184 TEPPHQ 189
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 68 ANPHQTSYRYRS----SSPCRLNLAVQILDKLPRVLF----DEDLRTRDSVCCVCLGEFE 119
+NP ++ +R+ S R L +++ P + + + ++D C +CL E E
Sbjct: 73 SNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELE 132
Query: 120 LKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTS 160
E + +P C H+FHI+CID WL S++TCP+CR ++ S
Sbjct: 133 DHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKS 173
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 79 SSSPCRLNLAVQILDKLPRVLFDED---LRTRDSVCCVCLGEFELKEELLQIPYCKHMFH 135
S+SP L +LDK+P ++ C VCL EFE ++E +P C H FH
Sbjct: 73 SASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFH 132
Query: 136 IECIDNWLQSNSTCPLCRCSIIP 158
++CID W +S STCPLCR + P
Sbjct: 133 VDCIDTWFRSRSTCPLCRAPVQP 155
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 104 LRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII-PTSK 161
+ + C +CLGEF E L +P C H FH+ CID WL+S+S CPLCR II PT++
Sbjct: 148 FKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQ 206
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 91 ILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
++ LP F ++ C VCL EFE E +P C+H FH++CID W S+STCP
Sbjct: 99 VIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCP 158
Query: 151 LCR 153
LCR
Sbjct: 159 LCR 161
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
C VCL EFE +++L +P C H FH+ECID WL S+STCPLCR +++
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLL 172
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 103 DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTS 160
D S C VCL EF+ E L +P C H FH+ CID WL+S+S CPLCR I+ +S
Sbjct: 151 DGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNP 165
C VCL EFE + + +P C H FH+ECID WL+S+ CPLCR +I+ ++ L P
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTP 210
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNP 165
C VCL EFE + + +P C H FH+ECID WL+S+ CPLCR +I+ ++ L P
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTP 210
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLN 164
C VCL EFE +E L +P CKH FH+ CID WL+S++ CPLCR I+ + ++
Sbjct: 217 CSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMID 270
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 90 QILDKLPRVLFDEDLRTRDSV----CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQS 145
+LD LP F R S+ C VCL +FE +++L +P C H FH +CID WL S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 146 NSTCPLCRCSIIPTSKFLNPPPLVVQDPPHQG 177
N TCPLCR + + L VV G
Sbjct: 152 NQTCPLCRSPLFASESDLMKSLAVVGSNNGGG 183
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C VCL EF ++L +P C H FH+ CID WL SNSTCPLCR S+
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 79 SSSPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIEC 138
SS+P LN + I+ LP F C VCL EF+ E +P CKH FH++C
Sbjct: 46 SSTPGGLNPS--IIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDC 103
Query: 139 IDNWLQSNSTCPLCRCSIIP 158
ID W S+S+CPLCR I P
Sbjct: 104 IDMWFHSHSSCPLCRSLIEP 123
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 86 NLAVQILDKLPRVLF----DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDN 141
L ++DK+P++ + D C VCL +F+L E + +P+C HMFH+ CIDN
Sbjct: 162 GLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 221
Query: 142 WLQSNSTCPLCR 153
WL + +CP+CR
Sbjct: 222 WLFRHGSCPMCR 233
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VCL EFE +++L +P C H FH++CID WL S+STCPLCR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 109 SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPPL 168
S C VCL EFE E L +P C H FH+ CID WL+S+S CPLCR + + NP
Sbjct: 140 SDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVN---NPTAS 196
Query: 169 VVQD 172
V Q+
Sbjct: 197 VGQN 200
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C VCL EFE E L IP C H+FH CID WL+S +TCPLCR +++P
Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPV 166
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 81 SPCRLNLAVQILDKLPRVLFDE----DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHI 136
S R L ++++ P L+ E + C +CL EFE +E L +P C H FH
Sbjct: 89 SRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHA 148
Query: 137 ECIDNWLQSNSTCPLCRCSI 156
CID WL S STCP+CR ++
Sbjct: 149 NCIDVWLSSWSTCPVCRANL 168
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 86 NLAVQILDKLPRVLFDE----DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDN 141
L +++ P L+ + + C +CL EFE +E L +P C H FH CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 142 WLQSNSTCPLCRCSIIP 158
WL S STCP+CR S+ P
Sbjct: 159 WLSSRSTCPVCRASLPP 175
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%)
Query: 80 SSPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECI 139
S P + L ++ LP + + C VCL E K+ +P CKH+FH+ C+
Sbjct: 69 SQPPKRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCV 128
Query: 140 DNWLQSNSTCPLCRCSIIPTSKFLNPPP 167
D WL + STCP+CR P+ L P P
Sbjct: 129 DTWLTTQSTCPVCRTEAEPSHPRLEPEP 156
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 92 LDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
L LP V F +D C +CL E ++ +P C H FH+ECID W QS+STCP+
Sbjct: 108 LSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPI 167
Query: 152 CRCSII 157
CR +++
Sbjct: 168 CRNTVL 173
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
+ + D+VCC+CL ++ EEL ++P C H FH EC+D WL+ N++CPLC+ +
Sbjct: 353 ERAISGEDAVCCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKSEV 407
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 86 NLAVQILDKLPRVLFDEDLRTR-----DSVCCVCLGEFELKEELLQIPYCKHMFHIECID 140
L V +++ P L+ D++T+ + C +CL EFE E L +P C H+FH CID
Sbjct: 99 GLDVSVVETFPTFLY-SDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 157
Query: 141 NWLQSNSTCPLCRCSI 156
WL+++ TCP+CR ++
Sbjct: 158 AWLEAHVTCPVCRANL 173
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 84 RLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
R+ + +L +P V F+ C VCL E ++ +P C H FH+ECID+WL
Sbjct: 61 RVGIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWL 120
Query: 144 QSNSTCPLCR 153
QSNSTCP+CR
Sbjct: 121 QSNSTCPICR 130
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 30/46 (65%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C VCL EFE E L +P C H FHI CID WL S++ CPLCR I
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 86 NLAVQILDKLPRVLFDEDL-RTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQ 144
L Q L ++P L+ + + + C +CLG+FE E++ +P C H FH+ CID WL
Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLL 147
Query: 145 SNSTCPLCRCSIIPTSKFLNPPPLVV 170
S S+CP CR S++ P P+ V
Sbjct: 148 SRSSCPTCRQSLL----LEQPSPMAV 169
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 86 NLAVQILDKLPRVLF----DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDN 141
L +++K+P++ + D C VCL +F+L E + +P+C HMFH+ CIDN
Sbjct: 167 GLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 226
Query: 142 WLQSNSTCPLCR 153
WL + +CP+CR
Sbjct: 227 WLLRHGSCPMCR 238
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 84 RLNLAVQILDKLPRVLFDEDLRT---RDSVCCVCLGEFELKEELLQIPYCKHMFHIECID 140
+L L +++ PR++ + R + C +CL ++E +E + IP C H FH +C+D
Sbjct: 64 KLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVD 123
Query: 141 NWLQSNSTCPLCRCSIIPT 159
WL++++TCPLCR S P+
Sbjct: 124 EWLRTSATCPLCRNSPAPS 142
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 78 RSSSPCRLNLAVQILDKLPRVLFDEDLRTRDSV----CCVCLGEFELKEELLQIPYCKHM 133
R+S L I++ P L+ E R + C VC+ EFE E L +P C H+
Sbjct: 59 RTSITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHV 118
Query: 134 FHIECIDNWLQSNSTCPLCRCSII---PTSKFLNPPPLVVQ 171
FH +C+ WL +STCPLCR + +LNP P +V+
Sbjct: 119 FHADCVSVWLSDHSTCPLCRVDLCLQPGERSYLNPEPDLVE 159
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 103 DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
D R++ C +CL E+ +E L +P CKH FH+ C+D WL+ N +CP+CR S +PT
Sbjct: 128 DGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPT 184
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 81 SPCRLNLAVQILDKLPRVLFDE----DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHI 136
S R + +++ P L+ E + C +CL EFE +E L +P C H FH
Sbjct: 86 SRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHA 145
Query: 137 ECIDNWLQSNSTCPLCRCSI 156
CID WL S STCP+CR ++
Sbjct: 146 NCIDEWLSSRSTCPVCRANL 165
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VCL +FE E L +P C+H FHI CID WL+ ++TCPLCR
Sbjct: 123 CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 84 RLNLAVQILDKLPRVLFDE-DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNW 142
R L + L K P + +++ + C +CLGEF E + +P C H FH+ CID W
Sbjct: 77 RAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTW 136
Query: 143 LQSNSTCPLCRCSII 157
L S+S+CP CR S+I
Sbjct: 137 LVSHSSCPNCRHSLI 151
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C VCL +FE E L +P C+H FHI CID WL+ ++TCPLCR +
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 86 NLAVQILDKLPRVLFDEDL--RTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
L ++L LP++ F + + + C +CL EF +EL +P C H FH+ CID WL
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143
Query: 144 QSNSTCPLCR 153
S+S+CP CR
Sbjct: 144 GSHSSCPSCR 153
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 92 LDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
L +P + +L+ + + C +CLG+F E + +P C H FH++CID WL S+S+CP
Sbjct: 94 LKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPT 153
Query: 152 CRCSII 157
CR S++
Sbjct: 154 CRQSLL 159
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 85 LNLAVQILDKLPRVLFDEDLRTR---------DSVCCVCLGEFELKEELLQIPYCKHMFH 135
+ L +++ P+ F +D D+ C +CL E++ E L +P CKH FH
Sbjct: 103 VGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFH 162
Query: 136 IECIDNWLQSNSTCPLCRCSIIPT 159
+ C+D WL+ N +CP+CR S +PT
Sbjct: 163 LCCLDAWLKLNGSCPVCRNSPLPT 186
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 86 NLAVQILDKLPRVLFDEDLRTR----DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDN 141
L + ++ P L+ E R C VCL EFE E L +P C H+FH +C+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 142 WLQSNSTCPLCRCSII 157
WL +STCPLCR ++
Sbjct: 166 WLSEHSTCPLCRADLV 181
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 86 NLAVQILDKLPRVLFDEDLRTRDSV--------CCVCLGEFELKEELLQIPYCKHMFHIE 137
L + L LPR F T + C +CL +F EE+ +P C H FH+E
Sbjct: 69 GLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVE 128
Query: 138 CIDNWLQSNSTCPLCR 153
CID WL S S+CP CR
Sbjct: 129 CIDKWLVSRSSCPSCR 144
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 84 RLNLAVQILDKLPRVLFDEDLR----TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECI 139
R+ L ++ +V E R + D VC +CL E+ KE + +P C+H FH ECI
Sbjct: 296 RIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECI 355
Query: 140 DNWLQSNSTCPLCR 153
D WL+ +S+CP+CR
Sbjct: 356 DAWLKLHSSCPVCR 369
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VCL +F++ E + +P+C HMFH+ CID WL+ +++CPLCR
Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 71 HQTSYRYRSS--------SPCRLNLAVQILDKLPRVLFDE----DLRTRDSVCCVCLGEF 118
H+T YR S R L ++++ P L+ E + C +CL EF
Sbjct: 71 HKTFYRAEVEAASQEVFHSRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEF 130
Query: 119 ELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
KE L +P C H FH CID WL S STCP CR ++
Sbjct: 131 VDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL 168
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 86 NLAVQILDKLPRVLFDEDLRTRDSV--CCVCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
L ++L LP++ + D + + C +CL EF +EL +P C H FH+ CID WL
Sbjct: 77 GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWL 136
Query: 144 QSNSTCPLCRCSIIPT 159
S+S+CP CR ++ T
Sbjct: 137 GSHSSCPSCRQILVVT 152
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
C +CL EF + E+ +P C H FH+ECID WL+ N CP CRCS+ P
Sbjct: 235 CLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCRCSVFP 281
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 107 RDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKF 162
D+ CC+CL +E + EL ++P C H FH C+D WL N+TCPLC+ +I+ +S +
Sbjct: 321 EDAECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCKYNILKSSNY 375
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
C VCL EF+ E L +P C H+FH +C+D WL +STCP+CR ++P
Sbjct: 85 CVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKVVP 132
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VCL +F++ E + +P+C HMFH+ CID WL+ +++CPLCR
Sbjct: 200 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPP 167
D C VCL +FE KE ++ P CKHMFH ECI WL++ CP+CR I+ +K + PP
Sbjct: 169 DKRCSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSPP 227
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPP 167
C VCL + +++ ++P CKH+FH++C+D WL + STCP+CR + P + L P P
Sbjct: 108 CAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPR-LEPEP 163
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 100 FDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
+ L D+ CC+CL +E EL ++P C H FH C+D WL N+TCPLC+ +I+ +
Sbjct: 342 IEHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILKS 400
Query: 160 SKF 162
S
Sbjct: 401 SNL 403
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 104 LRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
+ D+ CC+CL + E++ ++P C H+FH++C+D WL+ N+TCPLC+ + +S
Sbjct: 348 ISGEDASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKNEVGESSS 404
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 67 TANPHQTSYRYRSSSPCRLNLAVQILDKLPRVLFDE----DLRTRDSVCCVCLGEFELKE 122
+ P + R +++ L + ++ P ++ E + C +CL EFE E
Sbjct: 76 SVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDE 135
Query: 123 ELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
L +P C H+FH CI WLQ + TCP+CR ++
Sbjct: 136 TLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPP 167
D C VCL +FE KE ++ P CKHMFH ECI WL++ CP+CR I+ +K + PP
Sbjct: 141 DKRCSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILKPTKQDSSPP 199
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 100 FDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
+ L D+ CC+CL +E EL ++P C H FH C+D WL N+TCPLC+ +I+ +
Sbjct: 271 IEHTLLQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILKS 329
Query: 160 SKF 162
S
Sbjct: 330 SNL 332
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 93 DKLP-RVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
D LP + D D T C +C+ EF EE+ +P C H FH+ CID WL S S+CP
Sbjct: 97 DDLPCSSVGDGDSSTE---CAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPS 153
Query: 152 CRCSIIPT 159
CR ++P
Sbjct: 154 CRRILVPV 161
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
D+ C +CL EF +E + +P C H FH+ CID WL S+S+CP CR +I T
Sbjct: 128 DTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQT 179
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 96 PRVLFDEDLR--TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
P +++ DL ++ C +CL EFE E + + C+H FH++CI WL + S+CP CR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
Query: 154 CSII 157
SI
Sbjct: 150 TSIF 153
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CLG +E + ++ C H FH+ECID WL S+STCPLCR ++
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAA 186
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 100 FDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
+ L D+ CC+CL E+E EL ++P C H FH CID WL NS CPLC+ +I+
Sbjct: 327 IERSLSPEDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFNILKN 385
Query: 160 S 160
+
Sbjct: 386 A 386
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 92 LDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
++ +PRV+ ED C +CL E+ + ++P CKH FH +C++ WL ++TCP+
Sbjct: 90 VENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATCPM 148
Query: 152 CR 153
CR
Sbjct: 149 CR 150
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 102 EDLRTRDSVCC-VCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
ED+ D CC +CL EF++ EL+ I C+H+FH C+ +W+ +N CP+CRCS+
Sbjct: 68 EDVEEGDEGCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCSV 123
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 111 CCVCLGEFELKEELLQI-PYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTS 160
C +CL EFE + LL++ C H+FH ECID WL+SN TCP+CR ++ P +
Sbjct: 114 CAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNA 164
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
T VC +CL E+ KE + IP C H FH+ECID WL+ + +CPLCR
Sbjct: 133 TNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCR 180
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSKFLNPPPLVV 170
C VCL + ++ +P C H FH++CID W QS+STCPLCR ++ V
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGS-----------V 168
Query: 171 QDPPHQGA 178
+D H G+
Sbjct: 169 EDTTHGGS 176
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + + L++ DS C VC EFELK E Q+P C H++H +CI WL +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 151 LCR 153
+CR
Sbjct: 225 VCR 227
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + + L++ DS C VC EFELK E Q+P C H++H +CI WL +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 151 LCR 153
+CR
Sbjct: 225 VCR 227
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + + L++ DS C VC EFELK E Q+P C H++H +CI WL +++CP
Sbjct: 166 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNSCP 224
Query: 151 LCR 153
+CR
Sbjct: 225 VCR 227
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C +CL EFE E+++I C+H+FH CID WL N TCP CRCS+
Sbjct: 110 CPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCRCSL 155
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 113 VCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
+CLG FE E++ +P C H +H EC+D WL++ S+CPLCR SI
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + LR+ DS C VC EFEL E Q+P C H++H +CI WL +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 151 LCR 153
+CR
Sbjct: 229 VCR 231
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + LR+ DS C VC EFEL E Q+P C H++H +CI WL +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 151 LCR 153
+CR
Sbjct: 229 VCR 231
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 92 LDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP + + LR+ DS C VC EFEL E Q+P C H++H +CI WL +++CP
Sbjct: 170 IDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCP 228
Query: 151 LCR 153
+CR
Sbjct: 229 VCR 231
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
D C +CL +F E+L +P C H FH+ CID WLQ + TCP CR ++ T
Sbjct: 132 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVET 183
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
D VC +CL E+ KE + IP C H FH ECID WL+ + +CPLCR
Sbjct: 317 DIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 362
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT-------SKFL 163
C +CL EF ++ + I C+H FH CID W + + TCP+CRC + P F
Sbjct: 103 CAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELDPGMIGSGRLESFH 162
Query: 164 NPPPLVVQDPPHQ 176
N + +QD H
Sbjct: 163 NTVTITIQDINHD 175
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 90 QILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+++D LP V E L+ C +CL +F+ E ++P CKH FHI CI WL+ +S+C
Sbjct: 225 EVVDNLPTVKISESLQ-----CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSC 278
Query: 150 PLCRCSIIPTSK 161
P+CR + P +
Sbjct: 279 PVCRYELPPDDE 290
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 90 QILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+++D LP V E L+ C +CL +F+ E ++P CKH FHI CI WL+ +S+C
Sbjct: 225 EVVDNLPTVKISESLQ-----CSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHSSC 278
Query: 150 PLCRCSIIPTSK 161
P+CR + P +
Sbjct: 279 PVCRYELPPDDE 290
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 88 AVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS 147
A+ + LP V F + R C VCL +FE +E+ ++ C+H+FH C+D W+ +
Sbjct: 66 AILAGEMLPVVRFSDINRPESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYN 125
Query: 148 --TCPLCRCSIIP 158
TCPLCR IP
Sbjct: 126 QMTCPLCRTQFIP 138
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
D+ CC+CL +E EL+ +P C H FH CI WL+ N+TCPLC+ +I+
Sbjct: 289 DADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 92 LDKLPRVLFDEDLR---TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNST 148
++ +V E R T +C +CL E+ KE + +P C H FH++CID WL+ +S+
Sbjct: 231 IESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSS 290
Query: 149 CPLCR 153
CP+CR
Sbjct: 291 CPVCR 295
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRC 154
C +CL E E E+++I C+H+FH CID+WL+ N +CP CRC
Sbjct: 117 CSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCRC 160
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 92 LDKLPRVLFDED-LRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
+D LP V +D L++ + C VC+ EFE ++ Q+P CKH+FH +C+ WL+ +++CP
Sbjct: 196 IDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHNSCP 254
Query: 151 LCRCSI 156
+CR +
Sbjct: 255 VCRFEL 260
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CL +F E++ +P C H FH+ CID WLQ + TCP CR ++ T
Sbjct: 136 CVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVET 184
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CL +F E+L +P C H FH+ CID WLQ + TCP CR ++ T
Sbjct: 135 CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVET 183
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 88 AVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS 147
+V + LPRV+ E+ + VC +C F L+ E Q+P C H++H CI WL + +
Sbjct: 327 SVSCVRNLPRVIIAEEHVMKGLVCAICKELFSLRNETTQLP-CLHLYHAHCIVPWLSARN 385
Query: 148 TCPLCR 153
+CPLCR
Sbjct: 386 SCPLCR 391
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
D D CC+CL +++ KEE+ ++P C H FH++C+D WL+ S CPLC+
Sbjct: 279 DSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
D D CC+CL +++ KEE+ ++P C H FH++C+D WL+ S CPLC+
Sbjct: 279 DSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 70 PHQTSYRYRSSSPCRLNLAVQILDKLPRVLFDEDLRTRDSV---CCVCLGEFELKEELLQ 126
P TSY R A+ I + LP + F+E + + + C VCL EFE ++E+
Sbjct: 50 PDYTSYPTRIPETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRW 109
Query: 127 IPYCKHMFHIECIDNWLQSN-STCPLCRCSIIP 158
+ C+H+FH C+D W+ + TCPLCR +P
Sbjct: 110 LRNCRHIFHRSCLDRWMDHDQKTCPLCRTPFVP 142
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 104 LRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
L + D+ C +CL +E EL ++P C+H FH C+D WL+ N+TCPLC+ +I+ +
Sbjct: 316 LLSEDAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNILKNGE 372
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
T VC +CL E+ KE + IP C H FH +CID WL+ + +CPLCR
Sbjct: 311 TNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCR 358
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
T D CC+CL +++ KEE+ ++P C H FH +C+D WL+ S CPLC+
Sbjct: 292 TDDPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
T D CC+CL +++ KEE+ ++P C H FH +C+D WL+ S CPLC+
Sbjct: 292 TDDPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CL +F E+L +P C H FH+ CID WL + TCP CR ++ T
Sbjct: 130 CVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDT 178
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 86 NLAVQILDKLPRVLFDE-DLRTR-DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
L+ + + KLP+ F E TR +S C VC F + +P C H+FH +C+D WL
Sbjct: 83 GLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142
Query: 144 QSNSTCPLCRCSI 156
STCP+CR +
Sbjct: 143 LKASTCPICRARV 155
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
C VCL E E E++ ++ C+H FH +CID WL S CPLCR I P
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP 109
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 80 SSPCRLNLAVQIL---DKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHI 136
S P RL L+ + +P V F + L + C VCL +F +++ Q+P C H+FH
Sbjct: 51 SDPTRLALSTSATLANELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHH 110
Query: 137 ECIDNWLQ--SNSTCPLCRCSIIPTSK 161
C+D W+ + TCP+CR +P K
Sbjct: 111 RCLDRWIVDCNKITCPICRNRFLPEEK 137
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C VCL F +EL Q+ CKH FH+ CI+ WL+ + CP+CR +
Sbjct: 142 CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
C +C ++E E+L+ +P CKH +H ECI+NWL+ N CP+C +
Sbjct: 288 CVICRLDYEDDEDLILLP-CKHSYHSECINNWLKINKVCPVCSAEV 332
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 91 ILDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
++D LP V L E+L + VC +C E KE++ ++P CKH +H ECI WL +TC
Sbjct: 270 VVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLP-CKHYYHGECIIPWLGIRNTC 328
Query: 150 PLCR 153
P+CR
Sbjct: 329 PVCR 332
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 85 LNLAVQILDKLPRVLFDE--------DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHI 136
L L +++ P++ ++E + S C +CL +++ + + +P C H+FH
Sbjct: 95 LGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHD 154
Query: 137 ECIDNWLQSNSTCPLCRCSIIPT 159
C+D WL+ + TCP+CR S +P+
Sbjct: 155 NCVDPWLRLHPTCPVCRTSPLPS 177
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 94 KLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNW-LQSNSTCPLC 152
L V+F + + + C +CL EFE ++ + +P C H+FHI CI+ W L+ + TCPLC
Sbjct: 45 NLVGVMFGDKEKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLC 104
Query: 153 R 153
R
Sbjct: 105 R 105
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 82 PCRLNLAVQILDKLPRVLFD--EDLRTRDS--VCCVCLGEFELKEELLQIPYCKHMFHIE 137
P L ++I++ P + +DLR C +CL EF+ L + C H+FH E
Sbjct: 77 PVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQE 136
Query: 138 CIDNWLQSNSTCPLCRCSIIPTSKFLNPPPLV 169
CID W +S+ TCP+CR + P N P V
Sbjct: 137 CIDLWFESHRTCPVCRRDLDPPPPPENTKPTV 168
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 102 EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
E+L D+ C +C E ++L+ C H+FH+ C+ +WL+ TCP CR ++P
Sbjct: 283 EELTASDATCIICREEMTNAKKLI----CGHLFHVHCLRSWLERQQTCPTCRALVVPPEN 338
Query: 162 FLNPPPLVVQDPPHQGA 178
+ P Q HQG+
Sbjct: 339 ATSAAP--GQRELHQGS 353
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CL + E++ +I C H FH++CID WL STCPLCR I P
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPV 118
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 90 QILDKLPRVLFDEDLRTR---DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSN 146
++++KLP ++F E+L + ++ CC+C + +++ ++P CKH FH C+ WL +
Sbjct: 206 EVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLDEH 264
Query: 147 STCPLCR 153
++CP+CR
Sbjct: 265 NSCPICR 271
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 86 NLAVQILDKLPRVLFDE-DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQ 144
L+V L+K+P++ E + R + C VCL + E + +P C H FH C D WL
Sbjct: 78 GLSVLELEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLS 137
Query: 145 SNSTCPLCRCSIIP 158
+++ CP+CR + P
Sbjct: 138 NHTVCPVCRAELAP 151
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 102 EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
E+L + D+ C +C E ++L+ C H+FH+ C+ +WL+ +TCP CR ++P
Sbjct: 212 EELSSNDATCIICREEMTSAKKLV----CGHLFHVHCLRSWLERQNTCPTCRALVVP 264
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 102 EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
E+L + D+ C +C E ++L+ C H+FH+ C+ +WL+ +TCP CR ++P
Sbjct: 104 EELSSNDATCIICREEMTSAKKLV----CGHLFHVHCLRSWLERQNTCPTCRALVVP 156
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
+ L D+ CC+CL +E EL +P C H FH CI WL+ +TCPLC+ +I+
Sbjct: 297 ERTLLAEDADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 107 RDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
D++C +CL E+ +E + +P C+H FH ECID WL+ +++CP+CR
Sbjct: 260 NDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 93 DKLPRVLFD-EDLRTRD-SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
++LP V F E++ R VC +C E E L ++P C+H +H ECI NWL + +TCP
Sbjct: 77 EELPVVEFTAEEMMERGLVVCAICREELAANERLSELP-CRHYYHKECISNWLSNRNTCP 135
Query: 151 LCRCSI 156
LCR ++
Sbjct: 136 LCRHNV 141
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 71 HQTSYRYRSSSPCRLNLAVQILDKLPRVLF-DEDLRTRDSVCCVCLGEFELKEELLQIPY 129
H T +R R + RL+ +++ LP F D C +CL ++ E L +P
Sbjct: 193 HWTQWRGRHTRTIRLD--AKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP- 249
Query: 130 CKHMFHIECIDNWL-QSNSTCPLCRCSI 156
C+H FH+ CID+WL + ++CP+C+ I
Sbjct: 250 CQHAFHLNCIDSWLTKWGTSCPVCKHDI 277
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 102 EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
E+L + D+ C +C E ++L+ C H+FH+ C+ +WL+ +TCP CR ++P
Sbjct: 283 EELSSNDATCIICREEMTSAKKLV----CGHLFHVHCLRSWLERQNTCPTCRALVVP 335
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 67 TANPHQTSYRYRSSSPCRLNLAVQILDKLPRVLFDEDLR----TRDSVCCVCLGEFELKE 122
A+ HQ S + P LA +IL P + F E R + C VCL EFE +
Sbjct: 63 AAHHHQESSFF---FPVAARLAGEIL---PVIRFSELTRPGFGSGSDCCAVCLHEFENDD 116
Query: 123 ELLQIPYCKHMFHIECIDNWLQSNS--TCPLCRCSII 157
E+ ++ C+H+FH C+D W+ + TCPLCR I
Sbjct: 117 EIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFI 153
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 98 VLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
++ DEDL ++ VC +C EFE+ EE ++ C H++H CI +WL ++TCP+CR +
Sbjct: 126 IITDEDL-VKEKVCAICKEEFEVGEEGKELK-CLHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 86 NLAVQILDKLPRVLF----DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDN 141
L +++K+P++ + D C VCL +F+L E + +P+C HMFH+ CIDN
Sbjct: 167 GLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 226
Query: 142 WL 143
WL
Sbjct: 227 WL 228
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 71 HQTSYRYRSSSPCRLNLAVQILDKLPRVLF-DEDLRTRDSVCCVCLGEFELKEELLQIPY 129
H T +R R + RL+ +++ LP F D C +CL ++ E L +P
Sbjct: 193 HWTQWRGRHTRTIRLD--AKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP- 249
Query: 130 CKHMFHIECIDNWL-QSNSTCPLCRCSI 156
C+H FH+ CID+WL + ++CP+C+ I
Sbjct: 250 CQHAFHLNCIDSWLTKWGTSCPVCKHDI 277
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 90 QILDKLPRVLFDE--DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL-QSN 146
++ ++P +F+ D T +CC+CL +E ++L +P C H FH+ C+D WL Q
Sbjct: 211 SMIIRMPTTIFNGICDEATTSILCCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQRK 269
Query: 147 STCPLCR 153
S CP+C+
Sbjct: 270 SFCPVCK 276
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 86 NLAVQILDKLP-RVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQ 144
L+ L KLP ++ E +R + + C +CL + + E +P C H FH+ C+D WL
Sbjct: 150 GLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLI 209
Query: 145 SNSTCPLCRCSI 156
+ +CP+CR ++
Sbjct: 210 RHGSCPICRQAV 221
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 103 DLRTRDSVCCVCLGEF-ELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
DL D C +C+ +F E E+++++P C H+FH C+ WL ++CPLCR
Sbjct: 151 DLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCR 202
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 85 LNLAVQILDKLPRVLFDEDLRTRDSVCC-VCLGEFELKEELLQIPYCKHMFHIECIDNWL 143
L+ + + ++L V+ DL T CC VCL +FE +++ Q+P C H+FH C+D W+
Sbjct: 59 LSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWI 118
Query: 144 --QSNSTCPLCRCSIIPTSKF 162
+ CP+CR +P K+
Sbjct: 119 VDYNKMKCPVCRHRFLPKEKY 139
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPT 159
C +CL E++ +I C H FH++CID WL+ S CPLCR I P
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPV 118
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 102 EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
+D D C +C E+E K+E+ ++ C H FHI+C++ WL ++CP+C+
Sbjct: 310 QDTTVADRKCIICQDEYEAKDEVGEL-RCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL---------QSNSTCPLCRCSIIP 158
+ +C VCLG+ E ++E+ ++ C H+FH +CID WL ++ TCPLCR ++P
Sbjct: 80 NDMCAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLLP 139
Query: 159 T 159
+
Sbjct: 140 S 140
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 90 QILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+ ++ LP V E L+ C VCL +FE E ++P CKH FH+ CI WL+ +S+C
Sbjct: 243 EAVEALPTVKIMEPLQ-----CSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSC 296
Query: 150 PLCRCSI 156
P+CR +
Sbjct: 297 PVCRFEL 303
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 79 SSSPCRLNLAVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIEC 138
S+ P L L +I++ P + D C +CL EF + + I C H FH C
Sbjct: 123 SNPPENLGLDSKIIESFPEYPYSVKDHGTDQ-CSICLTEFMDDDTIRLISTCNHSFHTIC 181
Query: 139 IDNWLQSNSTCPLCR 153
ID W + + TCP+CR
Sbjct: 182 IDLWFEGHKTCPVCR 196
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 103 DLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL-QSNSTCPLCRCSIIPTSK 161
+L ++ C +CL EF+ + L + CKH FH+ CI WL S+S+CP CR T+
Sbjct: 94 NLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCR-----TNI 148
Query: 162 FLNPPPLVVQDPP 174
F +PP L Q P
Sbjct: 149 FSSPPQLHSQSLP 161
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 92 LDKLPRVLFDEDLRTRD-SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
++ LP V T D S C VC+ EF + + ++P CKH++H +CI WL+ N++CP
Sbjct: 204 INSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELP-CKHIYHKDCIVPWLRLNNSCP 262
Query: 151 LCR 153
+CR
Sbjct: 263 ICR 265
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
+ VC +CL +F++ + + + CKH+FH++CID+W TCP+CR
Sbjct: 88 VKADVCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIP 158
DS C +CL E+ +++ +P CKH++H +CI WL+ N C +C+ + P
Sbjct: 231 DSQCSICLMEYAKGDKITTLP-CKHIYHKDCISQWLKQNKVCCICKAEVYP 280
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
DE+ C +CL + + EE P C+H++H CID WL+++ TCP CR
Sbjct: 120 DEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCR 172
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 93 DKLPRVLFDEDLRTRDS---VCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS-T 148
D LP F ED+ +R + C +C EF+ +E+ + C H++H CID W+Q + T
Sbjct: 51 DMLPATKF-EDISSRVNPPESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMT 109
Query: 149 CPLCRCSIIPTSKFL 163
CPLCR I+P F
Sbjct: 110 CPLCRTPIVPDFYFF 124
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 88 AVQILDKLPRV-LFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSN 146
A ++ LP V L E+L ++VC VC E ++E++ ++P C H +H ECI WL
Sbjct: 311 AKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLP-CSHFYHGECIIPWLGIR 369
Query: 147 STCPLCR 153
+TCP+CR
Sbjct: 370 NTCPVCR 376
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 88 AVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS 147
++ + LPRV E C +C E+ + ++P CKH +H+EC++ WL+ ++
Sbjct: 463 TIRAVAMLPRVAMVEK-----GECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHT 516
Query: 148 TCPLCR 153
+CP CR
Sbjct: 517 SCPQCR 522
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 91 ILDKLPRVLFDEDLRTRD--SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNST 148
++D+L R ++++ ++ SVC +CL EFE E ++ +P C H F CI W +
Sbjct: 136 VVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLP-CGHEFDDGCIGKWFLKDHV 194
Query: 149 CPLCR 153
CPLCR
Sbjct: 195 CPLCR 199
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 104 LRTRDSV--CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
++ DS+ C VCL +FE+ E ++P CKH FH +C+ WL+ +S+CP+CR ++PT
Sbjct: 216 VKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR-YLLPTGD 273
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 104 LRTRDSV--CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
++ DS+ C VCL +FE+ E ++P CKH FH +C+ WL+ +S+CP+CR ++PT
Sbjct: 216 VKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR-YLLPTGD 273
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 104 LRTRDSV--CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
++ DS+ C VCL +FE+ E ++P CKH FH +C+ WL+ +S+CP+CR ++PT
Sbjct: 216 VKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR-YLLPTGD 273
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCS 155
D+D++ C +C E+ +EL IP C+HM+H+ C+ WL+ + CP+C+ S
Sbjct: 470 DDDIK-----CSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICKTS 518
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 101 DEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCS 155
D+D++ C +C E+ +EL IP C+HM+H+ C+ WL+ + CP+C+ S
Sbjct: 470 DDDIK-----CSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICKTS 518
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 92 LDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
++ LPRV + ++ C VC FE + E ++P CKH+FH +CI WL ++CP+
Sbjct: 180 IESLPRVEISDCHIGSEANCAVCTEIFETETEAREMP-CKHLFHDDCIVPWLSIRNSCPV 238
Query: 152 CR 153
CR
Sbjct: 239 CR 240
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 90 QILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+L +P V F+ + + C VCL +F +++ +P C H FH + D WL S+ TC
Sbjct: 58 SVLLSIPVVSFNANAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTC 117
Query: 150 PLCR 153
P CR
Sbjct: 118 PNCR 121
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
D+ C +C E+ + +E+ ++ +C+H +H++C+ WL+ S CP+C+ + +SK
Sbjct: 445 DAKCSICQEEYTIGDEVGRL-HCEHTYHVKCVQEWLRIKSWCPICKATAETSSK 497
>AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr2:10397588-10398184 FORWARD
LENGTH=198
Length = 198
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 66 ITANPHQTSYRYRSSSPCRLNLAVQILDKLPRVL--------FDEDLRTRDSVCCVCLGE 117
+ A ++ Y P + ++V++ K+ V+ D D C +CL
Sbjct: 97 VEAQRQRSQSFYSQQQPLFMIVSVKLTQKVYSVVPCISSPSATDVDQEEESETCAICLEN 156
Query: 118 FELKEELLQIPYCKHMFHIECIDNW-LQSNSTCPLCR 153
E Q+PYCKH +H C+ W + N++CPLCR
Sbjct: 157 MSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCR 193
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 109 SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
S C +CL ++E E ++ C H FH+ CID WL TCP+CR
Sbjct: 169 SSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 92 LDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPL 151
++ LPRV + ++ C VC FE E ++P CKH+FH +CI WL ++CP+
Sbjct: 196 IESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMP-CKHIFHGDCIVPWLSIRNSCPV 254
Query: 152 CR 153
CR
Sbjct: 255 CR 256
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSIIPTSK 161
CCVC E+ E++ + C H FH +CI WL+ + CP+C+ + + T+K
Sbjct: 637 CCVCQEEYTEGEDMGTLE-CGHEFHSQCIKEWLKQKNLCPICKTTGLNTAK 686
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 15/61 (24%)
Query: 108 DSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWL---------------QSNSTCPLC 152
+ C VCLG+ E +E+ ++ C HMFH ECID WL ++ TCPLC
Sbjct: 79 NDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLC 138
Query: 153 R 153
R
Sbjct: 139 R 139
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 91 ILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQS-NSTC 149
++D LP L+ + S C +CL E+E + + +P C H FH C+D WL+ + C
Sbjct: 470 VVDLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHRVC 528
Query: 150 PLCRCSI 156
PLCR I
Sbjct: 529 PLCRGDI 535
>AT1G24580.1 | Symbols: | RING/U-box superfamily protein |
chr1:8710232-8710573 FORWARD LENGTH=113
Length = 113
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSN-STCPLCR 153
CCVCL F+ +EE+ ++ CKH FH C+DNW +N +TCPLCR
Sbjct: 67 CCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCR 110
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 96 PRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCS 155
P++ + D+ T C +CL E ++ L +P C H+FH +CID WL +++ CPLC
Sbjct: 103 PQIFEEPDMET----CGLCLLE---EQHLFDMPNCAHVFHGDCIDKWLSTSNNCPLCGVE 155
Query: 156 II 157
I+
Sbjct: 156 IM 157
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 91 ILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQS--NST 148
++D LP L+ + S C +CL E+E + + +P C H FH C+D WL+ +
Sbjct: 470 VVDLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHSRV 528
Query: 149 CPLCRCSI 156
CPLCR I
Sbjct: 529 CPLCRGDI 536
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 109 SVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQS-NSTCPLCRCSIIP 158
S C VCL + + EE+ ++ C+H+FH +C++ WLQ N CPLCR ++P
Sbjct: 72 SDCIVCLSKLKTGEEVRKLD-CRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 91 ILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCP 150
++ L R ++ + +C +CL EF ++ +P C H F EC+ W ++N +CP
Sbjct: 39 VVKSLARKIYKMTTSSTGEMCIICLEEFSEGRRVVTLP-CGHDFDDECVLKWFETNHSCP 97
Query: 151 LCR 153
LCR
Sbjct: 98 LCR 100
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 90 QILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
+ ++ L V +E L+ C VCL +FE+ E +P C H FH +C+ WL+ +S+C
Sbjct: 207 EAVEALATVKIEETLQ-----CSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSC 260
Query: 150 PLCR 153
P+CR
Sbjct: 261 PVCR 264
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C +CL E++ +E + ++P CKH FH CI+ WL + +CP+CR
Sbjct: 113 CVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHGSCPVCR 154
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 91 ILDKLPRVLFD-EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTC 149
L+ LP VL + E+ VC VC E + + +Q+P C H +H ECI WL+ +TC
Sbjct: 288 FLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLP-CNHKYHSECIVPWLKVRNTC 346
Query: 150 PLCR 153
P+CR
Sbjct: 347 PVCR 350
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VC+ F + ++P C H+FH +C+D WL STCP+CR
Sbjct: 115 CVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
C +C ++++ E + +P CKH++H ECI WL N CP+C +
Sbjct: 197 CVICQLKYKIGERQMNLP-CKHVYHSECISKWLSINKVCPVCNSEVF 242
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSII 157
C +C ++++ E + +P CKH++H ECI WL N CP+C +
Sbjct: 197 CVICQLKYKIGERQMNLP-CKHVYHSECISKWLSINKVCPVCNSEVF 242
>AT1G67856.1 | Symbols: | RING/U-box superfamily protein |
chr1:25442486-25442887 FORWARD LENGTH=133
Length = 133
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSN-STCPLCR 153
CCVCL F+ +EE+ ++ CKH FH C+D W +N +TCPLCR
Sbjct: 87 CCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCR 130
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 88 AVQILDKLPRVLFDEDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNS 147
++ ++ L ++ + D C VC +FE+ + ++P CKH++H ECI WL +
Sbjct: 98 SLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMP-CKHIYHSECILPWLVQRN 156
Query: 148 TCPLCR 153
TCP+CR
Sbjct: 157 TCPVCR 162
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
C VCLG + +P C HMF ECI WL+S++TCP+CR
Sbjct: 91 CPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVCR 133
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 106 TRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNWLQSNSTCPLCRCSI 156
T ++ C +C+ ++ ++ C H FH +CI+ WLQ N CPLCR SI
Sbjct: 178 TEENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 111 CCVCLGEFELKEELLQIPYCKHMFHIECIDNWL-QSNSTCPLCRCSIIP 158
C VCL + + EE+ ++ C+H+FH +C++ WL Q N TCPLCR +++
Sbjct: 86 CVVCLSKLKEGEEVRKLE-CRHVFHKKCLEGWLHQFNFTCPLCRSALVS 133
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 70 PHQTSYRYRSSSPCRL-NLAVQILDKLPRVLFDEDLRTRD------SVCCVCLGEFELKE 122
P S+ R + L ++AV D R+L ++ + D + C +CL +F
Sbjct: 105 PFSVSFYVRVTRDVMLPSIAVPSRDMFQRLLEEQTMEFTDLGDEEETTCSICLEDFSESH 164
Query: 123 E--LLQIPYCKHMFHIECIDNWLQSNSTCPLCR 153
+ ++ +P C H+FH CI WL+ +CPLCR
Sbjct: 165 DDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 86 NLAVQILDKLPRVLFD---EDLRTRDSVCCVCLGEFELKEELLQIPYCKHMFHIECIDNW 142
++ +++ +P ++F ED T C +CL ++ + ++L +P C H FH C+D+W
Sbjct: 205 GMSRRLVKAMPSLIFSSFHED-NTTAFTCAICLEDYTVGDKLRLLPCC-HKFHAACVDSW 262
Query: 143 LQSNST-CPLCR 153
L S T CP+C+
Sbjct: 263 LTSWRTFCPVCK 274