Miyakogusa Predicted Gene

Lj4g3v3002620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3002620.1 tr|F4JZY1|F4JZY1_ARATH COP1-interactive protein 1
OS=Arabidopsis thaliana GN=CIP1 PE=4
SV=1,26.79,2e-17,coiled-coil,NULL; seg,NULL,CUFF.51997.1
         (468 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41780.1 | Symbols:  | myosin heavy chain-related | chr5:1672...   156   3e-38
AT1G64320.1 | Symbols:  | myosin heavy chain-related | chr1:2386...   147   2e-35
AT5G41790.1 | Symbols: CIP1 | COP1-interactive protein 1 | chr5:...    93   4e-19

>AT5G41780.1 | Symbols:  | myosin heavy chain-related |
           chr5:16723075-16724833 FORWARD LENGTH=537
          Length = 537

 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 251/473 (53%), Gaps = 74/473 (15%)

Query: 3   QVNELEHETKSLRTQKDEMEERIKCGALKQTDQLMEQLNVMQNKLDS--LGNLNRELKVE 60
           QV+ L+ ET  LR Q  E+   I+     + ++  E L  +  KL++  L N  REL++E
Sbjct: 118 QVSNLKQETVFLRDQNMEVAGDIEG----KRNEDREHLKGLMTKLEAALLCNQKRELEME 173

Query: 61  MNRKKEQITQYQIQIENLEENVAETKSIEKGMVEQKEGFLARIKDLEHELETQSNQRNEL 120
           + +K  Q+++ Q++++ LEE   +    E  +V++KE    +++ LE  ++T   +R E 
Sbjct: 174 LVKKTNQVSETQMRLKRLEEETEKRAKAEMKIVKEKEALWNKVQKLEAGVDTFRKKRKEF 233

Query: 121 EEELRSVSYEMKQVENENKTLHDRNCDLEAAMAHKGDDMFGFLKKHESHENEACVEATAL 180
            EE++S          EN+ LH +                                  A+
Sbjct: 234 NEEMKSKI-------TENQKLHTK---------------------------------IAV 253

Query: 181 KAELEHQNERNQKEHAESLTKMETLNVKLETQIAEQEKIIKDQAATIDRISAEEKQAKIM 240
             E+E ++++ + +  E     E +  +L  +I +Q+K++K+Q   ID+ S ++K  K  
Sbjct: 254 IDEIEDKSKKLEYQVKEQ----EDIIQRLSMEIKDQKKLLKEQKDAIDKFSEDQKLMKRW 309

Query: 241 LNRLKFNPRFAEKKMEELVEELRKKMEDSIRLLHQRIHVAEQLNNENKNSCKMTKERYE- 299
               K N    EKKMEEL E+ R KMED IR+LH+RIHVAEQ++ E+K+S   T++  + 
Sbjct: 310 SFGSKLNTNLLEKKMEELAEDFRMKMEDHIRILHRRIHVAEQIHLESKSSYIKTRDNTQT 369

Query: 300 EENKILGEKVACYEEKLRTRKEGVVEFEPNRFELSVINGLNVAAEKVEEHSDFILSRVSK 359
           EEN+  G + A  E + +  KE V +          + G  +A +K+EE  + + +RV++
Sbjct: 370 EENR--GNR-AVSETQFKKIKEMVEQG---------LAGPEMAIKKLEESGE-LGNRVTR 416

Query: 360 MLCEVESAKDWIKKRSGEMKE----LKDNVNXXXXXXXXXXXXVWELEAKVSKEGGEKLN 415
           +  E++SA+ W+K++   MK     L+  +             + +LEAK+++EG EKL+
Sbjct: 417 LAKEIDSARKWVKEKDNNMKHEVETLEAKLECREAQESLLKEKLSKLEAKLAEEGTEKLS 476

Query: 416 LTKTVRKLEKKVGKLENNLKEKDEDLICLGEKKREVIRQLCFVVDFHRDRCNY 468
           L+K +R    K+ KLE N+KEK+ +L+ LGE KRE IRQLC +VD+   RC Y
Sbjct: 477 LSKAMR----KIKKLEINVKEKEFELLSLGEGKREAIRQLCVLVDYQ--RCRY 523


>AT1G64320.1 | Symbols:  | myosin heavy chain-related |
           chr1:23869036-23870548 FORWARD LENGTH=476
          Length = 476

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 235/436 (53%), Gaps = 71/436 (16%)

Query: 36  LMEQLNVMQNKLDSLGNLNRELKVEMNRKKEQITQYQIQIENLEENVAETKSIEKGMVEQ 95
           LM+Q+N M+++L+SL +   E + ++ +K E++T+ ++Q+++L+E               
Sbjct: 94  LMDQVNGMKHELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKE--------------- 138

Query: 96  KEGFLARIKDLEHELETQSNQRNELEEELRSVSYEMKQVENENKTLHDRNCDLEAAMAHK 155
                                  E EEE   +S E+ Q++ EN+ LH R  +L       
Sbjct: 139 -----------------------ETEEERNRLSEEIDQLKGENQMLHRRISEL------- 168

Query: 156 GDDMFGFLKKHESHENEACVEATALKAELEHQNERNQKEHAESLTKMETLNVKLETQIAE 215
            D +   +K   +HE    +E  + K + E  +++   +  + + +      +L  +I +
Sbjct: 169 -DSLHMEMKTKSAHE----MEDASKKLDTEVSDQKKLVKEQDDIIR------RLSAKIKD 217

Query: 216 QEKIIKDQAATIDRISAEEKQAK---IMLNR-LKFNPRFAEKKMEELVEELRKKMEDSIR 271
           Q++++K+Q  TID+ + ++KQ+K      +R LK NP   E+KMEEL E+ R K+ED IR
Sbjct: 218 QQRLLKEQKDTIDKFAEDQKQSKRWSFGSSRDLKLNPNALERKMEELAEDFRMKIEDHIR 277

Query: 272 LLHQRIHVAEQLNNENKNSCKMTKERYEEENKILGEKVACYEEKLRTRKEGVVEFEPNRF 331
           +L++RIHVAEQ++ E+KN    T++  +E NK   E +  +E +    K+ + +      
Sbjct: 278 ILYRRIHVAEQIHLESKNEYIKTRDMLKE-NKENRESLMFFETQFNKMKDALEKG----- 331

Query: 332 ELSVINGLNVAAEKVEEHSDFILSRVSKMLCEVESAKDWIKKRSGEMKELKDNVNXXXXX 391
                 G   A +K+EE ++ + +RV+++  E+ESAK W+ ++  E++ L   +      
Sbjct: 332 ----YTGSETAMKKLEE-AEEVTNRVARIGKEMESAKLWVSEKKSEVETLTAKLECSEAQ 386

Query: 392 XXXXXXXVWELEAKVSKEGGEKLNLTKTVRKLEKKVGKLENNLKEKDEDLICLGEKKREV 451
                  + +LE K+++EG EKL L K + K E ++ +LE  +K ++ +L+ LGE+KRE 
Sbjct: 387 ETLLKEKLSKLEKKLAEEGTEKLKLAKVLSKFETRIKELEVKVKGREVELLSLGEEKREA 446

Query: 452 IRQLCFVVDFHRDRCN 467
           IRQLC +VD+H+DR N
Sbjct: 447 IRQLCILVDYHQDRYN 462


>AT5G41790.1 | Symbols: CIP1 | COP1-interactive protein 1 |
            chr5:16727530-16732391 FORWARD LENGTH=1586
          Length = 1586

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 248/504 (49%), Gaps = 89/504 (17%)

Query: 2    AQVNELEHETKSLRTQKDEMEERIKCG---ALKQTDQLMEQLNVMQNKLDSLGNLNRELK 58
            A+++ L  E  S+  QK+E+E+++ C    A  +  +L +++N ++ ++ SL +   EL+
Sbjct: 1114 AEIDGLRAELDSMSVQKEEVEKQMVCKSEEASVKIKRLDDEVNGLRQQVASLDSQRAELE 1173

Query: 59   VEMNRKKEQITQYQIQIENLEENVAETKSIEKGMVEQKEGFLARIKDLEHELETQSNQRN 118
            +++ +K E+I++Y  QI NL+E +     + + ++E+  G   +IK  E ELET   QR+
Sbjct: 1174 IQLEKKSEEISEYLSQITNLKEEIINKVKVHESILEEINGLSEKIKGRELELETLGKQRS 1233

Query: 119  ELEEELRSVSYEMKQVENENKTLHDR-NCDLEAAMAHKGDDMFGFLKKH------ESHEN 171
            EL+EELR+        + EN  +HD+ N      MA    ++   LK        +  E 
Sbjct: 1234 ELDEELRT-------KKEENVQMHDKINVASSEIMALT--ELINNLKNELDSLQVQKSET 1284

Query: 172  EACVEATAL-KAELEHQNERNQKEHAESLTKMETLNVKLETQIAEQEKIIKDQAATIDRI 230
            EA +E     K+EL +Q    QK    +L + E     LE +  +  ++ K+  AT++++
Sbjct: 1285 EAELEREKQEKSELSNQITDVQK----ALVEQEAAYNTLEEEHKQINELFKETEATLNKV 1340

Query: 231  SAEEKQAKIML-NRLK-FNPRFA-----EKKMEELVEELRKK-------------MEDSI 270
            + + K+A+ +L  R K    R +     E+ ME L  EL  K             +E  +
Sbjct: 1341 TVDYKEAQRLLEERGKEVTSRDSTIGVHEETMESLRNELEMKGDEIETLMEKISNIEVKL 1400

Query: 271  RLLHQRIHVAEQLNNENKNSCKMTKERYEEENKILGEKVACYEEKLRTRKEGVVEFEPNR 330
            RL +Q++ V EQ+  E + + +  + ++ EE  +L + +    E  R    G+++   ++
Sbjct: 1401 RLSNQKLRVTEQVLTEKEEAFRKEEAKHLEEQALLEKNLTMTHETYR----GMIKEIADK 1456

Query: 331  FELSVINGLNVAAEKVEEHS---DFILSRVSKMLCEVESAKDWIKKRSGEMKELKDNVNX 387
              ++V +G    +EK+ E     +  +   SK+L    +A +W+ +R+ E    K+ +N 
Sbjct: 1457 VNITV-DGFQSMSEKLTEKQGRYEKTVMEASKILW---TATNWVIERNHE----KEKMNK 1508

Query: 388  XXXXXXXXXXXVWELEAKVSKEGGEKLNLTKTVRKLEKKVGKLENNLKEKD---EDLICL 444
                         E+E K            + ++KL    GK+  + KEK+   E L+ L
Sbjct: 1509 -------------EIEKK-----------DEEIKKL---GGKVREDEKEKEMMKETLMGL 1541

Query: 445  GEKKREVIRQLCFVVDFHRDRCNY 468
            GE+KRE IRQLC  +D HR RC Y
Sbjct: 1542 GEEKREAIRQLCVWIDHHRSRCEY 1565