Miyakogusa Predicted Gene

Lj4g3v2991190.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2991190.2 Non Chatacterized Hit- tr|I1K6D9|I1K6D9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.81,0,SUBFAMILY NOT
NAMED,NULL; F-BOX AND WD40 DOMAIN PROTEIN,NULL; seg,NULL; ARM
repeat,Armadillo-type fo,CUFF.51963.2
         (612 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11270.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   621   e-178

>AT4G11270.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr4:6854461-6859490 FORWARD LENGTH=1446
          Length = 1446

 Score =  621 bits (1602), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 340/632 (53%), Positives = 416/632 (65%), Gaps = 41/632 (6%)

Query: 1    MFPGHMNYPSKVLWDGARGYIACLCQTHYGTSDG-DVLYIWDVKTGSRERVLRGTAAHSM 59
            MFPGH NYP+KV+WDG RGYIACL ++    SD  DVLYIWDVKTG+RERVL G A+HSM
Sbjct: 622  MFPGHPNYPTKVVWDGTRGYIACLFRSLSRKSDPIDVLYIWDVKTGARERVLHGAASHSM 681

Query: 60   FDHFCKSISMNSISGSLLNGNTSVSSLLLPIVDDARLSNSSLXXXXXXXXXXXXXXXXXN 119
            FDHFC  IS  S SG++LNGNTSVSSLL P VD+ R                        
Sbjct: 682  FDHFCAGISEKSHSGTVLNGNTSVSSLLFP-VDEERKPFYLKNYERAASLSTSKPSSSQE 740

Query: 120  MTELRSSKANAGVENSSKPNSSSLFGLLSNKLPIKCSCPLPGVVSLSFDLASLMFSFKMN 179
             T   SS A++ +++   P+             IKC+CP PG+ +L FDL+SL    + +
Sbjct: 741  KTREESSTASSFLQSIRYPS-------------IKCTCPFPGISTLIFDLSSLAVYCQTH 787

Query: 180  EST-------QNGDGKPVNINLEQQGIPEQNPSHHNPETIEGRDWVSLFEEYLLRYSLSF 232
            E +       +  D         +   P Q    ++ E +     +    EYL+R+SLSF
Sbjct: 788  EDSDMHKMLEEKSDKATAQQKTSKDKSPVQKTLDNHAEVVHMDKAIG---EYLIRFSLSF 844

Query: 233  LHLWSVDSELDNLLINDMKLRRPENFIVASGIQGDKGSLTLAFP--DATLELWKSSSEFC 290
            LHLW +D ELD +L+  +KL+RPE+FIV SG+QGDKGSLTLAFP  +ATLELWKSSSEF 
Sbjct: 845  LHLWGIDFELDQMLVAHLKLKRPESFIVTSGLQGDKGSLTLAFPGLNATLELWKSSSEFT 904

Query: 291  AMRSLTMVSLAQRLIXXXXXXXXXXXXXXXFYTRNFIENFPDLKPPSLQLLVAFWQDESE 350
            A+RS+ MVSLAQ +I               FYTRN  E +PDLKPP LQLLV FWQD SE
Sbjct: 905  ALRSVIMVSLAQCMISLSHSTATYSSNLAAFYTRNLAEKYPDLKPPLLQLLVTFWQDNSE 964

Query: 351  HVRMAARSIFHCAASHAIPLPLRNSKPIESTNM----------SSQVGSDNKHMGDMTVQ 400
             VRMAARS+FH  AS AIPLPL +    E   +            +V S  +     ++ 
Sbjct: 965  QVRMAARSLFHHTASLAIPLPLCSDHASEHAELVRSLSGISLNEPKVLSTGEEYPTNSLD 1024

Query: 401  SISPKEEKQGISQDEESKILAWLESFEVQDWISCVGGTSQDAMRSHIVVASALSIWYPSL 460
            S     + Q +SQ EES+IL+WLESFE+QDWISCVGGTSQDAM +HI+VA+ALSIWYPSL
Sbjct: 1025 S-EHIHQAQRLSQAEESEILSWLESFEMQDWISCVGGTSQDAMAAHIIVAAALSIWYPSL 1083

Query: 461  VKPSLATLVVHPLMKLAMAMSEKYSSTAAELLSEGMEGTWKECIASEIPHLIGDIFFQVE 520
            VKP LA LVVH L+ L MAMSEKYSSTAAELLSEGME TWK  I  +IP ++ DIFFQ+E
Sbjct: 1084 VKPGLAMLVVHKLLNLVMAMSEKYSSTAAELLSEGMETTWKTWIGPDIPRIVSDIFFQIE 1143

Query: 521  LSGPSSKSMTEVPVASFAIKKTLVEVLLPSLAMADIPGFLTVIESQIWSTASDSPVHLVS 580
                S  +   VP    +IK+TLVEVLLPSLAMAD+ GFL++IESQIWSTASDSPVH+VS
Sbjct: 1144 CVSSSVGAYQVVPS---SIKETLVEVLLPSLAMADVLGFLSIIESQIWSTASDSPVHVVS 1200

Query: 581  LLTLIRIMRGSPRNLAQYLDKVVNYILQTLDP 612
            L TLIRI+R +PRNL  +L+K VN++LQT+DP
Sbjct: 1201 LRTLIRIIRAAPRNLVLHLEKAVNFVLQTMDP 1232