Miyakogusa Predicted Gene

Lj4g3v2963440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2963440.1 Non Chatacterized Hit- tr|I3SU43|I3SU43_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,88.01,0,GMP
SYNTHASE,NULL; GMP SYNTHASE-RELATED,NULL; GATASE,NULL;
ANTSNTHASEII,NULL; GMP_synthase,GMP synth,CUFF.51928.1
         (534 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63660.1 | Symbols:  | GMP synthase (glutamine-hydrolyzing), ...   909   0.0  
AT1G63660.2 | Symbols:  | GMP synthase (glutamine-hydrolyzing), ...   715   0.0  
AT3G27740.2 | Symbols: CARA | carbamoyl phosphate synthetase A |...    51   2e-06
AT3G27740.1 | Symbols: CARA | carbamoyl phosphate synthetase A |...    51   2e-06

>AT1G63660.1 | Symbols:  | GMP synthase (glutamine-hydrolyzing),
           putative / glutamine amidotransferase, putative |
           chr1:23604127-23607080 REVERSE LENGTH=534
          Length = 534

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/534 (80%), Positives = 482/534 (90%)

Query: 1   MEPKAVKSDLVLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGG 60
           ME   +K D VLILD+GSQYTHLITRRIRSL+VFSL ISGTSSL +I+  NP VVILSGG
Sbjct: 1   METPTMKPDTVLILDYGSQYTHLITRRIRSLNVFSLVISGTSSLKSITSYNPRVVILSGG 60

Query: 61  PHSVHTPDSPSFPDGFLDWARTNGVAVLGICYGLQLLVQRLGGDVRVGHTQEYGRMEITV 120
           PHSVH  D+PSFP+GF++WA +NGV+VLGICYGLQL+VQ+LGG V  G ++EYG+MEI V
Sbjct: 61  PHSVHALDAPSFPEGFIEWAESNGVSVLGICYGLQLIVQKLGGVVVEGESKEYGKMEIEV 120

Query: 121 EHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVVARSQQGSVAAIENPSSKFYGLQYH 180
           +  S +F S   G KQ+VWMSHGDEA  LP GF VVA+S QG+VAA+E+   K YGLQYH
Sbjct: 121 KGKSEIFGSESGGEKQMVWMSHGDEAVKLPEGFEVVAQSAQGAVAALESRKKKIYGLQYH 180

Query: 181 PEVTHTPEGMETLRHFLFEVCGVAAGWKMEDLLEEEVKVINNTVGPDEHVICALSGGVDS 240
           PEVTH+P+GMETLRHFLF+VCGV+A WKMEDL+EEE+KVIN TV  DEHVICALSGGVDS
Sbjct: 181 PEVTHSPKGMETLRHFLFDVCGVSADWKMEDLMEEEIKVINKTVASDEHVICALSGGVDS 240

Query: 241 TVAATLVHRAIGDRLHCVFVDNGLLRYKEQERVMETFEKDLHLPVVCVDAANQFLSELKG 300
           TVAATLVH+AIGDRLHC+FVDNGLLRYKEQERVM+TFE+DLHLPV CVDA+ +FLSELKG
Sbjct: 241 TVAATLVHKAIGDRLHCIFVDNGLLRYKEQERVMDTFERDLHLPVTCVDASERFLSELKG 300

Query: 301 VTDPEQKRKIIGKEFIAIFDAFAHELEQKIGKKPTYLVQGTLYPDVIESCPPPGSGRTHS 360
           V DPE KRKIIG+EFI IFD FA ELE+K GKKP +LVQGTLYPDVIESCPPPG+ RTHS
Sbjct: 301 VVDPETKRKIIGREFINIFDQFAQELEKKHGKKPAFLVQGTLYPDVIESCPPPGTDRTHS 360

Query: 361 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGKILDVPEGFLKRHPFPGPGLAVRV 420
           HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVR+LG+IL+VP GFLKRHPFPGPGLAVRV
Sbjct: 361 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRELGRILNVPVGFLKRHPFPGPGLAVRV 420

Query: 421 LGDVTQGNALDILRQVDEIFIQSIKEAGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVA 480
           LGDVTQGNAL++LRQVDEIFIQSI++AGLYDSIWQAFAVFLPVRSVGVQGD+RTHSHVVA
Sbjct: 421 LGDVTQGNALEVLRQVDEIFIQSIRDAGLYDSIWQAFAVFLPVRSVGVQGDKRTHSHVVA 480

Query: 481 LRAVTSQDGMTADWYNFEHKFLDDVARKICNGVRGVNRVVQDITSKPPSTIEWE 534
           LRAVTSQDGMTADW+NFEHKFLDDV+RKICN V+GVNRVV DITSKPPSTIEWE
Sbjct: 481 LRAVTSQDGMTADWFNFEHKFLDDVSRKICNSVQGVNRVVLDITSKPPSTIEWE 534


>AT1G63660.2 | Symbols:  | GMP synthase (glutamine-hydrolyzing),
           putative / glutamine amidotransferase, putative |
           chr1:23604874-23607080 REVERSE LENGTH=434
          Length = 434

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/434 (78%), Positives = 384/434 (88%)

Query: 1   MEPKAVKSDLVLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGG 60
           ME   +K D VLILD+GSQYTHLITRRIRSL+VFSL ISGTSSL +I+  NP VVILSGG
Sbjct: 1   METPTMKPDTVLILDYGSQYTHLITRRIRSLNVFSLVISGTSSLKSITSYNPRVVILSGG 60

Query: 61  PHSVHTPDSPSFPDGFLDWARTNGVAVLGICYGLQLLVQRLGGDVRVGHTQEYGRMEITV 120
           PHSVH  D+PSFP+GF++WA +NGV+VLGICYGLQL+VQ+LGG V  G ++EYG+MEI V
Sbjct: 61  PHSVHALDAPSFPEGFIEWAESNGVSVLGICYGLQLIVQKLGGVVVEGESKEYGKMEIEV 120

Query: 121 EHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVVARSQQGSVAAIENPSSKFYGLQYH 180
           +  S +F S   G KQ+VWMSHGDEA  LP GF VVA+S QG+VAA+E+   K YGLQYH
Sbjct: 121 KGKSEIFGSESGGEKQMVWMSHGDEAVKLPEGFEVVAQSAQGAVAALESRKKKIYGLQYH 180

Query: 181 PEVTHTPEGMETLRHFLFEVCGVAAGWKMEDLLEEEVKVINNTVGPDEHVICALSGGVDS 240
           PEVTH+P+GMETLRHFLF+VCGV+A WKMEDL+EEE+KVIN TV  DEHVICALSGGVDS
Sbjct: 181 PEVTHSPKGMETLRHFLFDVCGVSADWKMEDLMEEEIKVINKTVASDEHVICALSGGVDS 240

Query: 241 TVAATLVHRAIGDRLHCVFVDNGLLRYKEQERVMETFEKDLHLPVVCVDAANQFLSELKG 300
           TVAATLVH+AIGDRLHC+FVDNGLLRYKEQERVM+TFE+DLHLPV CVDA+ +FLSELKG
Sbjct: 241 TVAATLVHKAIGDRLHCIFVDNGLLRYKEQERVMDTFERDLHLPVTCVDASERFLSELKG 300

Query: 301 VTDPEQKRKIIGKEFIAIFDAFAHELEQKIGKKPTYLVQGTLYPDVIESCPPPGSGRTHS 360
           V DPE KRKIIG+EFI IFD FA ELE+K GKKP +LVQGTLYPDVIESCPPPG+ RTHS
Sbjct: 301 VVDPETKRKIIGREFINIFDQFAQELEKKHGKKPAFLVQGTLYPDVIESCPPPGTDRTHS 360

Query: 361 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGKILDVPEGFLKRHPFPGPGLAVRV 420
           HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVR+LG+IL+VP GFLKRHPFPGPGLAVRV
Sbjct: 361 HTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRELGRILNVPVGFLKRHPFPGPGLAVRV 420

Query: 421 LGDVTQGNALDILR 434
           LGDVTQGNAL++LR
Sbjct: 421 LGDVTQGNALEVLR 434


>AT3G27740.2 | Symbols: CARA | carbamoyl phosphate synthetase A |
           chr3:10281470-10283792 REVERSE LENGTH=358
          Length = 358

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 80/205 (39%), Gaps = 38/205 (18%)

Query: 7   KSDLVLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGGPHSVHT 66
           KS  V+  DFG +    I RR+ S       +  T   +   ++NP  ++ S GP     
Sbjct: 168 KSYKVIAYDFGIKQN--ILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPG---- 221

Query: 67  PDSPSFPDGFLDWARTNG-VAVLGICYGLQLLVQRLGG---DVRVGH--------TQEYG 114
            D  + P          G V V GIC G QLL Q LGG    ++ GH            G
Sbjct: 222 -DPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTG 280

Query: 115 RMEITVEHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVV-ARSQQGSVAAIENPSSK 173
           ++EI+ ++           H   V      + A+LP G  V       GS A +  P   
Sbjct: 281 QVEISAQN-----------HNYAV------DPASLPGGVEVTHVNLNDGSCAGLSFPEMN 323

Query: 174 FYGLQYHPEVTHTPEGMET-LRHFL 197
              LQYHPE +  P   +   R F+
Sbjct: 324 VMSLQYHPEASPGPHDSDNAFREFI 348


>AT3G27740.1 | Symbols: CARA | carbamoyl phosphate synthetase A |
           chr3:10281470-10283792 REVERSE LENGTH=430
          Length = 430

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 80/205 (39%), Gaps = 38/205 (18%)

Query: 7   KSDLVLILDFGSQYTHLITRRIRSLSVFSLCISGTSSLSAISELNPSVVILSGGPHSVHT 66
           KS  V+  DFG +    I RR+ S       +  T   +   ++NP  ++ S GP     
Sbjct: 240 KSYKVIAYDFGIKQN--ILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPG---- 293

Query: 67  PDSPSFPDGFLDWARTNG-VAVLGICYGLQLLVQRLGG---DVRVGH--------TQEYG 114
            D  + P          G V V GIC G QLL Q LGG    ++ GH            G
Sbjct: 294 -DPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTG 352

Query: 115 RMEITVEHPSALFPSYKVGHKQVVWMSHGDEAAALPPGFNVV-ARSQQGSVAAIENPSSK 173
           ++EI+ ++           H   V      + A+LP G  V       GS A +  P   
Sbjct: 353 QVEISAQN-----------HNYAV------DPASLPGGVEVTHVNLNDGSCAGLSFPEMN 395

Query: 174 FYGLQYHPEVTHTPEGMET-LRHFL 197
              LQYHPE +  P   +   R F+
Sbjct: 396 VMSLQYHPEASPGPHDSDNAFREFI 420