Miyakogusa Predicted Gene
- Lj4g3v2963430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2963430.1 tr|D7UPI4|D7UPI4_LOTJA BHLH transcription factor
OS=Lotus japonicus GN=LjGL3 PE=2 SV=1,99.78,0,no
description,Helix-loop-helix domain; HLH,Helix-loop-helix domain;
coiled-coil,NULL; HLH, helix-lo,CUFF.51923.1
(461 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 276 3e-74
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 257 1e-68
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 257 1e-68
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 257 1e-68
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 110 2e-24
AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 96 4e-20
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 96 6e-20
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 76 4e-14
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 4e-13
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 72 7e-13
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 1e-12
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 72 1e-12
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 71 1e-12
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 71 1e-12
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 71 1e-12
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 4e-11
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 65 7e-11
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 65 1e-10
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 64 2e-10
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 64 2e-10
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 64 2e-10
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 62 6e-10
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 6e-10
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 62 8e-10
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 62 1e-09
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 1e-09
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 6e-09
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 1e-08
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 2e-08
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 57 2e-08
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 57 3e-08
AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 3e-08
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 4e-08
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 4e-08
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 56 5e-08
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 56 5e-08
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 56 5e-08
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 56 6e-08
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 56 6e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 1e-07
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 55 1e-07
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 1e-07
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 1e-07
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 1e-07
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 1e-07
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 54 2e-07
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 5e-07
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 6e-07
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 52 7e-07
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 8e-07
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 52 1e-06
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 52 1e-06
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 51 2e-06
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 4e-06
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 5e-06
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 49 6e-06
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/483 (39%), Positives = 276/483 (57%), Gaps = 53/483 (10%)
Query: 1 MEGVIELGTTDHVSEDLHLIERIKTSFLNILHANDPLKSGATSKAREEESVACVAAFDHN 60
+ GV+E+GTT+H++ED+++I+ +KTSFL A DP + AR + + N
Sbjct: 180 LGGVVEIGTTEHITEDMNVIQCVKTSFL---EAPDPYAT--ILPARSDYHI-------DN 227
Query: 61 AYNAELI--PEVGYGIINT----TTSPDGSSNAL--QANQPPDE--TFMVDRINRGSTSQ 110
+ + I E+ + +T T SP ++N + Q D+ +FM +RI G SQ
Sbjct: 228 VLDPQQILGDEIYAPMFSTEPFPTASPSRTTNGFDQEHEQVADDHDSFMTERIT-GGASQ 286
Query: 111 FQSWQVVDDELSNCVHNSVNSSDCISQTF----ASPEKIGSAPN-VENLSDLQKCNNQKM 165
QSWQ++DDELSNCVH S+NSSDC+SQTF A G+ + V+ L +Q+
Sbjct: 287 VQSWQLMDDELSNCVHQSLNSSDCVSQTFVEGAAGRVAYGARKSRVQRLGQIQEQQRNVK 346
Query: 166 TL-VDPLSDDWHYQKVLSALLKNSDQLNIGMHFQNFYQESIFSIWKKGGPMDCQRPRVGA 224
TL DP +DD HYQ V+S + K + QL +G F+N ++S F+ WKK V A
Sbjct: 347 TLSFDPRNDDVHYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSSSSSSGTATVTA 406
Query: 225 -SQNLLKKVLFEVPRMHLDG--LLESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNE 281
SQ +LKK++F+VPR+H +L+S E D E G NH + E++RR KLNE
Sbjct: 407 PSQGMLKKIIFDVPRVHQKEKLMLDSPEARD----------ETG-NHAVLEKKRREKLNE 455
Query: 282 RFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITNVETRA-----KSSP 336
RF+TLR ++PS K DKVSILDD IEY + LE+R++ELE+ R+ T+ ETR + P
Sbjct: 456 RFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTETRGTMTMKRKKP 515
Query: 337 QDMVERTSDHYS-NKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITMNDNDVVIE 395
D ERTS + + N+ NGKK V + T L T+++ I N+VVIE
Sbjct: 516 CDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGL----TDNLRIGSFGNEVVIE 571
Query: 396 ITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSKLTGPTNATAKRIKQALQ 455
+ C+ R G L+EIM+ ++ L++ SVQS+ DG L LT+ K G AT IK+ALQ
Sbjct: 572 LRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTVNCKHKGSKIATPGMIKEALQ 631
Query: 456 KVV 458
+V
Sbjct: 632 RVA 634
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 58/466 (12%)
Query: 1 MEGVIELGTTDHVSEDLHLIERIKTSFLNILHANDPLKSGATSKAREEESVACVAAFDHN 60
+ GV+E+GTT+H+ ED+++I+ +KT FL P + ++++ +E +
Sbjct: 176 LGGVLEIGTTEHIKEDMNVIQSVKTLFLEA-----PPYTTISTRSDYQE---IFDPLSDD 227
Query: 61 AYNAELIPEVGYGIINTTTSPDGSSNALQANQPPDETFMVDRINRGSTSQFQSWQVVDDE 120
Y I E P S++ + ++F IN G SQ QSWQ V +E
Sbjct: 228 KYTPVFITEA---------FPTTSTSGFEQEPEDHDSF----INDGGASQVQSWQFVGEE 274
Query: 121 LSNCVHNSVNSSDCISQTF-ASPEKIGSAPN---VENLSDLQKCNNQKMTLVDPLSDDWH 176
+SNC+H S+NSSDC+SQTF + ++ P ++ L +Q+ +N + DD H
Sbjct: 275 ISNCIHQSLNSSDCVSQTFVGTTGRLACDPRKSRIQRLGQIQEQSNHV-----NMDDDVH 329
Query: 177 YQKVLSALLKNSDQLNIGMHFQNFYQESIFSIWKKGGPMDCQRPRVGASQNLLKKVLFEV 236
YQ V+S + K + QL +G FQNF + S F+ WK+ + + SQ ++KK+LFEV
Sbjct: 330 YQGVISTIFKTTHQLILGPQFQNFDKRSSFTRWKRSSSVKTLGEK---SQKMIKKILFEV 386
Query: 237 PRMHLDGLLESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKD 296
P M + KE + E NH LSE++RR KLNERF+TLRS++PS K
Sbjct: 387 PLM------------NKKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKI 434
Query: 297 DKVSILDDAIEYFRSLEKRIRELEAQRDITNVETR----AKSSPQDMVERTSDHYSNKIN 352
DKVSILDD IEY + L+KR++ELE+ R+ + ETR + P D ER S + N
Sbjct: 435 DKVSILDDTIEYLQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKR 494
Query: 353 NGKKSVVKKRKICDMEKTN-SDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEA 411
G V + + D+ +D L++SS N+VVIE+ C+ R G L+EIM+
Sbjct: 495 KGSDVNVGEDEPADIGYAGLTDNLRISSLG--------NEVVIELRCAWREGILLEIMDV 546
Query: 412 LNSLNIYFKSVQSTEADGHLYLTIKSKLTGPTNATAKRIKQALQKV 457
++ LN+ SVQS+ DG L LT+ K G AT I++ALQ+V
Sbjct: 547 ISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRV 592
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 58/466 (12%)
Query: 1 MEGVIELGTTDHVSEDLHLIERIKTSFLNILHANDPLKSGATSKAREEESVACVAAFDHN 60
+ GV+E+GTT+H+ ED+++I+ +KT FL P + ++++ +E +
Sbjct: 176 LGGVLEIGTTEHIKEDMNVIQSVKTLFLEA-----PPYTTISTRSDYQE---IFDPLSDD 227
Query: 61 AYNAELIPEVGYGIINTTTSPDGSSNALQANQPPDETFMVDRINRGSTSQFQSWQVVDDE 120
Y I E P S++ + ++F IN G SQ QSWQ V +E
Sbjct: 228 KYTPVFITEA---------FPTTSTSGFEQEPEDHDSF----INDGGASQVQSWQFVGEE 274
Query: 121 LSNCVHNSVNSSDCISQTF-ASPEKIGSAPN---VENLSDLQKCNNQKMTLVDPLSDDWH 176
+SNC+H S+NSSDC+SQTF + ++ P ++ L +Q+ +N + DD H
Sbjct: 275 ISNCIHQSLNSSDCVSQTFVGTTGRLACDPRKSRIQRLGQIQEQSNHV-----NMDDDVH 329
Query: 177 YQKVLSALLKNSDQLNIGMHFQNFYQESIFSIWKKGGPMDCQRPRVGASQNLLKKVLFEV 236
YQ V+S + K + QL +G FQNF + S F+ WK+ + + SQ ++KK+LFEV
Sbjct: 330 YQGVISTIFKTTHQLILGPQFQNFDKRSSFTRWKRSSSVKTLGEK---SQKMIKKILFEV 386
Query: 237 PRMHLDGLLESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKD 296
P M + KE + E NH LSE++RR KLNERF+TLRS++PS K
Sbjct: 387 PLM------------NKKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKI 434
Query: 297 DKVSILDDAIEYFRSLEKRIRELEAQRDITNVETR----AKSSPQDMVERTSDHYSNKIN 352
DKVSILDD IEY + L+KR++ELE+ R+ + ETR + P D ER S + N
Sbjct: 435 DKVSILDDTIEYLQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKR 494
Query: 353 NGKKSVVKKRKICDMEKTN-SDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEA 411
G V + + D+ +D L++SS N+VVIE+ C+ R G L+EIM+
Sbjct: 495 KGSDVNVGEDEPADIGYAGLTDNLRISSLG--------NEVVIELRCAWREGILLEIMDV 546
Query: 412 LNSLNIYFKSVQSTEADGHLYLTIKSKLTGPTNATAKRIKQALQKV 457
++ LN+ SVQS+ DG L LT+ K G AT I++ALQ+V
Sbjct: 547 ISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRV 592
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 58/466 (12%)
Query: 1 MEGVIELGTTDHVSEDLHLIERIKTSFLNILHANDPLKSGATSKAREEESVACVAAFDHN 60
+ GV+E+GTT+H+ ED+++I+ +KT FL P + ++++ +E +
Sbjct: 176 LGGVLEIGTTEHIKEDMNVIQSVKTLFLEA-----PPYTTISTRSDYQE---IFDPLSDD 227
Query: 61 AYNAELIPEVGYGIINTTTSPDGSSNALQANQPPDETFMVDRINRGSTSQFQSWQVVDDE 120
Y I E P S++ + ++F IN G SQ QSWQ V +E
Sbjct: 228 KYTPVFITEA---------FPTTSTSGFEQEPEDHDSF----INDGGASQVQSWQFVGEE 274
Query: 121 LSNCVHNSVNSSDCISQTF-ASPEKIGSAPN---VENLSDLQKCNNQKMTLVDPLSDDWH 176
+SNC+H S+NSSDC+SQTF + ++ P ++ L +Q+ +N + DD H
Sbjct: 275 ISNCIHQSLNSSDCVSQTFVGTTGRLACDPRKSRIQRLGQIQEQSNHV-----NMDDDVH 329
Query: 177 YQKVLSALLKNSDQLNIGMHFQNFYQESIFSIWKKGGPMDCQRPRVGASQNLLKKVLFEV 236
YQ V+S + K + QL +G FQNF + S F+ WK+ + + SQ ++KK+LFEV
Sbjct: 330 YQGVISTIFKTTHQLILGPQFQNFDKRSSFTRWKRSSSVKTLGEK---SQKMIKKILFEV 386
Query: 237 PRMHLDGLLESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKD 296
P M + KE + E NH LSE++RR KLNERF+TLRS++PS K
Sbjct: 387 PLM------------NKKEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKI 434
Query: 297 DKVSILDDAIEYFRSLEKRIRELEAQRDITNVETR----AKSSPQDMVERTSDHYSNKIN 352
DKVSILDD IEY + L+KR++ELE+ R+ + ETR + P D ER S + N
Sbjct: 435 DKVSILDDTIEYLQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKR 494
Query: 353 NGKKSVVKKRKICDMEKTN-SDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEA 411
G V + + D+ +D L++SS N+VVIE+ C+ R G L+EIM+
Sbjct: 495 KGSDVNVGEDEPADIGYAGLTDNLRISSLG--------NEVVIELRCAWREGILLEIMDV 546
Query: 412 LNSLNIYFKSVQSTEADGHLYLTIKSKLTGPTNATAKRIKQALQKV 457
++ LN+ SVQS+ DG L LT+ K G AT I++ALQ+V
Sbjct: 547 ISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKIATTGMIQEALQRV 592
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 56/260 (21%)
Query: 201 YQESIFSIWK-KGGPMDCQRPRVGASQNLLKKVLFEVPRMHLDGLLESQEENDYKEGTRL 259
Y +S F+ W+ + G Q +SQ +LK+++F VP +H D + RL
Sbjct: 309 YIQSSFATWRVENGKEHQQVKTAPSSQWVLKQMIFRVPFLH-----------DNTKDKRL 357
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
++ ++HV++ERRRR KLNE+F+TLRSMVP K DKVSIL D I Y L KR+ EL
Sbjct: 358 PRED--LSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 320 EAQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSS 379
E N + K+ + C K +
Sbjct: 416 E-------------------------------NTHHEQQHKRTRTC----------KRKT 434
Query: 380 TNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSKL 439
+ +V +++ +NDV++E+ C R G L++I++ L+ L I +V ++ D I++K+
Sbjct: 435 SEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKV 494
Query: 440 TGPTNATAKRIKQALQKVVL 459
G A+ +K+A+ +V++
Sbjct: 495 RG-KKASIAEVKRAIHQVII 513
>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:217106-219684
REVERSE LENGTH=526
Length = 526
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 149/320 (46%), Gaps = 52/320 (16%)
Query: 159 KCNNQKMTLVDPLSD-DWHYQKVLSALLKNS------DQLNIGMHFQNFYQE---SIFSI 208
K + +K L +SD D HY++ +S +L S + NI N S F
Sbjct: 235 KISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLR 294
Query: 209 WKKGGPMDCQRPRVG-----ASQNLLKKVLFEVPRMHLDGLLESQEENDYKEGTRLEADE 263
WK+ C++ G SQN+L+K+L +VP MH + SQ
Sbjct: 295 WKQ-----CEQQVSGFVQKKKSQNVLRKILHDVPLMHTKRMFPSQN-------------- 335
Query: 264 NGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQR 323
+G+N RR K NE+F LR+MVP+ + DK SIL++ I+Y + LE R+ ELE+
Sbjct: 336 SGLNQDDPSDRR--KENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCM 393
Query: 324 DITNVETRAKSSPQD-----MVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVS 378
N R + + ++ ++E TS +Y + KI D
Sbjct: 394 GSVNFVERQRKTTENLNDSVLIEETSGNYDDST-----------KIDDNSGETEQVTVFR 442
Query: 379 STNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSK 438
+ + + + +VVIE+ CS R + +IME L++L++ SV+S + L L +K+K
Sbjct: 443 DKTHLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTLNLKAK 502
Query: 439 LTGPTNATAKRIKQALQKVV 458
G A+ IK+ L++V+
Sbjct: 503 FRGAAVASVGMIKRELRRVI 522
>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:216866-219684
REVERSE LENGTH=580
Length = 580
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 60/324 (18%)
Query: 159 KCNNQKMTLVDPLSD-DWHYQKVLSALLKNS------DQLNIGMHFQNFYQE---SIFSI 208
K + +K L +SD D HY++ +S +L S + NI N S F
Sbjct: 235 KISEEKHQLPLGISDEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLR 294
Query: 209 WKKGGPMDCQRPRVG-----ASQNLLKKVLFEVPRMHLDGLLESQEENDYKEGTRLEADE 263
WK+ C++ G SQN+L+K+L +VP MH + SQ
Sbjct: 295 WKQ-----CEQQVSGFVQKKKSQNVLRKILHDVPLMHTKRMFPSQN-------------- 335
Query: 264 NGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQR 323
+G+N RR K NE+F LR+MVP+ + DK SIL++ I+Y + LE R+ ELE+
Sbjct: 336 SGLNQDDPSDRR--KENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCM 393
Query: 324 DITNVETRAKSSPQD-----MVERTSDHY--SNKI--NNGKKSVVKKRKICDMEKTNSDA 374
N R + + ++ ++E TS +Y S KI N+G+ V + +KT+
Sbjct: 394 GSVNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFR----DKTH--- 446
Query: 375 LKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLT 434
+ + + + +VVIE+ CS R + +IME L++L++ SV+S + L L
Sbjct: 447 --------LRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTLN 498
Query: 435 IKSKLTGPTNATAKRIKQALQKVV 458
+K+K G A+ IK+ L++V+
Sbjct: 499 LKAKFRGAAVASVGMIKRELRRVI 522
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 21/157 (13%)
Query: 263 ENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
E +NHV +ER+RR KLN+RF +LR++VP+ K DK S+L DAI Y L+ ++++ E
Sbjct: 411 EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAE-- 468
Query: 323 RDITNVETRAKSSPQDMVERTSDHYSNKINNGK--KSVVKKRKICDMEKTNSDALKVSST 380
S ++ +++ D S + NNGK S K+RK +N D+ S
Sbjct: 469 ------------SDKEEIQKKLDGMSKEGNNGKGCGSRAKERK-----SSNQDSTASSIE 511
Query: 381 NDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
++ + + DV+I + C + MEAL L++
Sbjct: 512 MEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDL 548
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 264 NGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQR 323
N +H+++ER+RR KL +RF+ L ++VP K DK S+L DA+++ + L++R+ ELE Q+
Sbjct: 149 NAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQK 208
Query: 324 DITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKIC------DMEKTNSDALKV 377
+E+ MV +VKK K+ + D
Sbjct: 209 KERRLES--------MV-----------------LVKKSKLILDDNNQSFSSSCEDGFSD 243
Query: 378 SSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
++ + +D DV+I+I C + G L +IM + L+I
Sbjct: 244 LDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHI 283
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
++++ERRRR KLN+R LRS+VP K D+ SIL DAI Y + L+ +EL+ + + N
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE-EN 373
Query: 328 VETRAKSS-PQDMVER-----TSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTN 381
ET S+ PQ + T H N+ SV ++ D+E +N ++
Sbjct: 374 SETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSV---KQDVDLENSNDKGQEMEPQV 430
Query: 382 DVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSKL 439
DV ++ + +++ C + G +MEAL+SL + + T A+ YL++ S +
Sbjct: 431 DVA-QLDGREFFVKVICEYKPGGFTRLMEALDSLGL-----EVTNANTTRYLSLVSNV 482
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
+++SER RR KLN+R LRS+VP+ K DK SI+ DAI Y L+ ++LEA+ I
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE--IRE 112
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
+E+ KSS +S + V +K+ ++ +S +L VT M
Sbjct: 113 LESTPKSSL---------SFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTF-M 162
Query: 388 NDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTI 435
+ +V+ +TC+ R ++++ E SLN+ + T G ++ T+
Sbjct: 163 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTV 210
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 21/155 (13%)
Query: 263 ENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
E +NHV +ER+RR KLN+RF +LR++VP+ K DK S+L DAI Y L+ ++++ E
Sbjct: 412 EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAE-- 469
Query: 323 RDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTND 382
S ++ +++ D + + N K S VK RK + E + ++V D
Sbjct: 470 ------------SDKEELQKQIDVMNKEAGNAKSS-VKDRKCLNQESSVLIEMEV----D 512
Query: 383 VTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
V I D +I I CS R + MEAL L++
Sbjct: 513 VKII--GWDAMIRIQCSKRNHPGAKFMEALKELDL 545
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
+++SER RR KLN+R LRS+VP+ K DK SI+ DAI Y L+ ++LEA+ I
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE--IRE 113
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
+E+ KSS +S + V +K+ ++ +S +L VT M
Sbjct: 114 LESTPKSSL---------SFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTF-M 163
Query: 388 NDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTI 435
+ +V+ +TC+ R ++++ E SLN+ + T G ++ T+
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTV 211
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
+++SER RR KLN+R LRS+VP+ K DK SI+ DAI Y L+ ++LEA+ I
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE--IRE 113
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
+E+ KSS +S + V +K+ ++ +S +L VT M
Sbjct: 114 LESTPKSSL---------SFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTF-M 163
Query: 388 NDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTI 435
+ +V+ +TC+ R ++++ E SLN+ + T G ++ T+
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTV 211
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 261 ADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELE 320
A +++SER RR KLN+R LRS+VP+ K DK SI+ DAI Y L+ ++LE
Sbjct: 49 ASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLE 108
Query: 321 AQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSST 380
A+ I +E+ KSS +S + V +K+ ++ +S +L
Sbjct: 109 AE--IRELESTPKSSL---------SFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLE 157
Query: 381 NDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTI 435
VT M + +V+ +TC+ R ++++ E SLN+ + T G ++ T+
Sbjct: 158 LKVTF-MGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTV 211
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 263 ENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
E +NHV +ER+RR KLN+RF LR++VP+ K DK S+L DAI Y ++K+IR E +
Sbjct: 316 EEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
Query: 323 RDI 325
+ I
Sbjct: 376 KQI 378
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 263 ENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
E +NHV +ER+RR KLN+RF LRS+VP+ K DK S+L DAI Y + L+++++ +E +
Sbjct: 391 EEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450
Query: 323 R 323
R
Sbjct: 451 R 451
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDIT 326
HVL+ER+RR KLNER + L +++P K DK ++L+DAI++ + L++R+++LE +R +T
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVT 191
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 265 GMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRD 324
+NHV +ER+RR KLN+RF LRS+VP+ K DK S+L DA+ Y L +++ +EA+R+
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 265 GMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRD 324
+NHV +ER+RR KLN+RF LRS+VP+ K DK S+L DA+ Y L +++ +EA+R+
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 265 GMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRD 324
+NHV +ER+RR KLN+RF LRS+VP+ K DK S+L DA+ Y L +++ +EA+R+
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
++++ERRRR KLN+R LRS+VP K D+ SIL DAI+Y + L +RI +L + + T
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST- 366
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
P + +S + S K ++C + + V + +
Sbjct: 367 -------PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQAR----VEVRL 415
Query: 388 NDNDVV-IEITCSPRAGRLMEIMEALNSLNI 417
+ V I + C R G L+ M+AL++L +
Sbjct: 416 REGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
++++ERRRR KLN+R LRS+VP K D+ SIL DAI+Y + L +RI +L + + T
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST- 366
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
P + +S + S K ++C + + V + +
Sbjct: 367 -------PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQAR----VEVRL 415
Query: 388 NDNDVV-IEITCSPRAGRLMEIMEALNSLNI 417
+ V I + C R G L+ M+AL++L +
Sbjct: 416 REGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
++++ERRRR KLN+R LRS+VP K D+ SIL DAI+Y + L +RI +L + + T
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST- 366
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
P + +S + S K ++C + + V + +
Sbjct: 367 -------PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQAR----VEVRL 415
Query: 388 NDNDVV-IEITCSPRAGRLMEIMEALNSLNI 417
+ V I + C R G L+ M+AL++L +
Sbjct: 416 REGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYF-------RSLEKRIRELE 320
+V+SER RR KLN+R LRS+VP+ K DK S++ D+I+Y ++LE IRELE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 321 AQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSST 380
++ T +E + + E +S+ NN +S KK K D T +
Sbjct: 115 SRS--TLLENPVRDYDCNFAETHLQDFSD--NNDMRS--KKFKQMDY-STRVQHYPIEVL 167
Query: 381 NDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
M + VV+ ITCS + ++++ + L SLN+
Sbjct: 168 EMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNL 204
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYF-------RSLEKRIRELE 320
+V+SER RR KLN+R LRS+VP+ K DK S++ D+I+Y ++LE IRELE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 321 AQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSST 380
++ T +E + + E +S+ NN +S KK K D T +
Sbjct: 115 SRS--TLLENPVRDYDCNFAETHLQDFSD--NNDMRS--KKFKQMDY-STRVQHYPIEVL 167
Query: 381 NDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
M + VV+ ITCS + ++++ + L SLN+
Sbjct: 168 EMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNL 204
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
++++ERRRR KLN+R LRS+VP K D+ SIL DAI+Y + L +RI +L + +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE--- 324
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
T SS + T S ++ K ++C ++S V + +
Sbjct: 325 -STPPSSSSLHPLTPTPQTLSYRV---------KEELC---PSSSLPSPKGQQPRVEVRL 371
Query: 388 NDNDVV-IEITCSPRAGRLMEIMEALNSLNI 417
+ V I + C R G L+ M AL++L +
Sbjct: 372 REGKAVNIHMFCGRRPGLLLSTMRALDNLGL 402
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 29/150 (19%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
+V+SER RR KLN+R LRS+VP+ K DK S++ D+I+Y + L + + LEA+ I
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE--IRE 112
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDVTITM 387
+E+R+ ++E D YS ++ + V++ +KV+ M
Sbjct: 113 LESRST-----LLENPMD-YSTRVQHYPIEVLE--------------MKVT-------WM 145
Query: 388 NDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
+ VV+ ITCS + ++++ + L SLN+
Sbjct: 146 GEKTVVVCITCSKKRETMVQLCKVLESLNL 175
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + M H+ ER RR ++NE LRS++P + + D+ SI+ AIE+ R LE+ ++
Sbjct: 191 EVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQ 250
Query: 318 ELEAQ--RDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNS--- 372
LE+Q R I R ++ +N+ + ++ + ++E
Sbjct: 251 CLESQKRRRILGETGRDMTTTTTSSSSPITTVANQ----AQPLIITGNVTELEGGGGLRE 306
Query: 373 -DALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHL 431
A S DV + + D +I+I R G+L++ + AL L++ T + +
Sbjct: 307 ETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTV 366
Query: 432 YLTIKSKLTGPTNATAKRIKQALQKV 457
+ K+T T TA+ I ++Q++
Sbjct: 367 LYSFNVKITSETRFTAEDIASSIQQI 392
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 263 ENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
E +NHV +ER+RR KLN+RF LR++VP+ K DK S+L DAI Y L+ ++ + E++
Sbjct: 448 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
Query: 323 R 323
+
Sbjct: 508 K 508
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 31/179 (17%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITN 327
HVL+ER+RR KL+E+F+ L +++P K DKV+ILDDAI + L++++R L+ +++ T
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATR 179
Query: 328 VETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTN---SDALKV---SSTN 381
+ M+ +VKK K+ E+ N S ++ + +
Sbjct: 180 -------QMESMI-----------------LVKKSKVFFDEEPNLSCSPSVHIEFDQALP 215
Query: 382 DVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFK-SVQSTEADGHLYLTIKSKL 439
++ ++ ND++I I C G ++ I+ + + + + S+ D L +T+ +++
Sbjct: 216 EIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 274
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H L+ERRRR K+NE+ TL+ ++P K KVS LDDAIEY +SL+ +I+ +
Sbjct: 260 HNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H L+ERRRR K+NER TL+ ++P K KVS+L+D IEY +SLE +I +
Sbjct: 155 HNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 266 MNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQ 322
++HV +E++RR KLN RF LR++VP + DK S+L DA+ Y SL+ +I +LE +
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 250 ENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYF 309
E + K+ +LE + ++++ERRRR +LN+R LRS+VP K D+ SIL DAI+Y
Sbjct: 163 ETNKKKSKKLEGQPS--KNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Query: 310 RSLEKRIRELEAQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEK 369
+ L +I +L+ + Q++ + H+S + D++
Sbjct: 221 KELLDKINKLQDEE-------------QELGNSNNSHHS-------------KLFGDLKD 254
Query: 370 TNSDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYF-KSVQSTEAD 428
N++ V ++ I D D ++I CSP+ G L+ + L +L + + V S +D
Sbjct: 255 LNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSD 314
Query: 429 GHLYLTIKSKLTGPTNATAKRIKQAL 454
L + T++ IKQAL
Sbjct: 315 FSLQASCSEGAEQRDFITSEDIKQAL 340
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDI 325
H LSE+RRR+++NE+ L+S++P++ K DK S+LD+AIEY + L+ +++ L + I
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGI 259
>AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:23038703-23041174 REVERSE
LENGTH=466
Length = 466
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 35/201 (17%)
Query: 266 MNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDI 325
+ H++SER+RR KLNE F LRS++P K DK S+L A E SL+ I +L +
Sbjct: 288 LQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLER--- 344
Query: 326 TNVETRAKSSPQDMVE---RTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTND 382
N E AK + + +E R + ++ +I + +S ++R + L+V D
Sbjct: 345 -NREVEAKLAGEREIENDLRPEERFNVRIRHIPESTSRERTL---------DLRVVLRGD 394
Query: 383 VTITMNDNDVVIEITCSPRAGRLMEIMEALNS---LNIYFKSVQSTEADGHLYLTI--KS 437
+ + +D++I RL+E ++ +N+ ++I +++ E D + L I +
Sbjct: 395 I---IRVDDLMI---------RLLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRL 442
Query: 438 KLTGPTNATAKRIKQALQKVV 458
K+ G + +A ++A+++VV
Sbjct: 443 KIEGEWDESA--FQEAVRRVV 461
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 245 LESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDD 304
+E+Q + ++ T + + H LSERRRR K+NE L+ ++P K D+ S+LDD
Sbjct: 259 VENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDD 318
Query: 305 AIEYFRSLEKRIR 317
IEY +SL+ +I+
Sbjct: 319 VIEYVKSLQSQIQ 331
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 245 LESQEENDYKEGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDD 304
+E+Q + ++ T + + H LSERRRR K+NE L+ ++P K D+ S+LDD
Sbjct: 259 VENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDD 318
Query: 305 AIEYFRSLEKRIR 317
IEY +SL+ +I+
Sbjct: 319 VIEYVKSLQSQIQ 331
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 266 MNHVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDI 325
+NHV +ER RR KLN RF LR++VP+ K DK S+L+DA+ Y L+ + +E ++
Sbjct: 342 LNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHA 401
Query: 326 TNVE 329
++
Sbjct: 402 IEIQ 405
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H LSER+RR ++NER L+ ++P K DK S+LD+AIEY +SL+ +I+ +
Sbjct: 218 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H LSE++RR+K+NE+ L+ ++P++ K DK S+LD+AIEY + L+ +++ L
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H LSER+RR ++NER L+ ++P K DK S+LD+AIEY +SL+ +I+ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H LSER+RR ++NER L+ ++P K DK S+LD+AIEY +SL+ +I+ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIR 317
H LSERRRR ++NE+ L+ ++P+ K DK S+LD+AIEY +SL+ +++
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIR 317
H LSERRRR ++NE+ L+ ++P+ K DK S+LD+AIEY +SL+ +++
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 244 LLESQEENDYKEGTRLEADENGMNHVL-SERRRRAKLNERFLTLRSMVPSNIKDDKVSIL 302
L+ +E N+ +G + + + +ER RR +RF L++++P+ K+D+ SI+
Sbjct: 192 LMYDEENNNLDDGLNRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIV 251
Query: 303 DDAIEYFRSLEKRIRELEAQRDITNVETRAKSSPQDMVERTSDHYS--------NKINNG 354
+AI+Y + L + I E + + V+ R + D+V+ S NK NN
Sbjct: 252 GEAIDYIKELLRTIDEFKLLVEKKRVKQRNREG-DDVVDENFKAQSEVVEQCLINKKNNA 310
Query: 355 KKSVVKKRKICDMEKTNSDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNS 414
+ KRK S DV + + D++V I+I + L+ + + ++
Sbjct: 311 LRCSWLKRK--------------SKFTDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQ 356
Query: 415 LNIYFKSVQSTEADGHLYLTIKSKLTGPT----NATAKRIKQALQKVVLKS 461
L + V + H +K++ + +A A R+ + L+K +++
Sbjct: 357 LELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASAIADRVMEVLKKQYMEA 407
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 28/231 (12%)
Query: 244 LLESQEENDYKEGTRLEADENGMNHVL-SERRRRAKLNERFLTLRSMVPSNIKDDKVSIL 302
L+ +E N+ +G + + + +ER RR +RF L++++P+ K+D+ SI+
Sbjct: 192 LMYDEENNNLDDGLNRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIV 251
Query: 303 DDAIEYFRSLEKRIRELEAQRDITNVETRAKSSPQDMVERTSDHYS--------NKINNG 354
+AI+Y + L + I E + + V+ R + D+V+ S NK NN
Sbjct: 252 GEAIDYIKELLRTIDEFKLLVEKKRVKQRNREG-DDVVDENFKAQSEVVEQCLINKKNNA 310
Query: 355 KKSVVKKRKICDMEKTNSDALKVSSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNS 414
+ KRK S DV + + D++V I+I + L+ + + ++
Sbjct: 311 LRCSWLKRK--------------SKFTDVDVRIIDDEVTIKIVQKKKINCLLFVSKVVDQ 356
Query: 415 LNIYFKSVQSTEADGHLYLTIKSKLTGPT----NATAKRIKQALQKVVLKS 461
L + V + H +K++ + +A A R+ + L+K +++
Sbjct: 357 LELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASAIADRVMEVLKKQYMEA 407
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 243 GLLESQEENDYKEGTR-----LEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDD 297
GL E ++ GT+ + N +H+L+ER+RR KL +RF+ L +++P K D
Sbjct: 97 GLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMD 156
Query: 298 KVSILDDAIEYFRSLEKRI 316
K S+L DAI++ + L++ +
Sbjct: 157 KASVLGDAIKHIKYLQESV 175
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 243 GLLESQEENDYKEGTR-----LEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIKDD 297
GL E ++ GT+ + N +H+L+ER+RR KL +RF+ L +++P K D
Sbjct: 97 GLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMD 156
Query: 298 KVSILDDAIEYFRSLEKRI 316
K S+L DAI++ + L++ +
Sbjct: 157 KASVLGDAIKHIKYLQESV 175
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Query: 269 VLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYF-------RSLEKRIRELEA 321
V+SER RR KLN+R LRS+VP+ K DK S++ D+I+Y ++LE IRELE+
Sbjct: 56 VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES 115
Query: 322 Q 322
+
Sbjct: 116 R 116
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRI 316
H SER+RR K+N+R TL+ +VP++ K DK S+LD+ IEY + L+ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 271 SERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELE 320
+ER RR LNER+ L+ ++PS K D+ SIL D I+Y L +R+ EL+
Sbjct: 218 TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + M H+ ER RR ++NE LRS++PS+ + D+ SI+ AI Y + LE ++
Sbjct: 109 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQ 168
Query: 318 ELEAQRDITNVETRAKSSPQDMVERTSDHYS 348
+E +R T+ K+S +V +D +S
Sbjct: 169 SMEPKRTRTHDPKGDKTSTSSLVGPFTDFFS 199
>AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:26107368-26108640 REVERSE
LENGTH=296
Length = 296
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 255 EGTRLEADENGMNHVLSERRRRAKLNERFLTLRSMVPSNIK--DDKVSILDDAIEYFRSL 312
E T ++ + MNH+ ER RR ++N L+SM+P + +D+ SI++ I Y + L
Sbjct: 91 EKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKL 150
Query: 313 EKRIRELEAQRDITNV 328
E+R++ LEAQ T +
Sbjct: 151 EQRLQSLEAQLKATKL 166
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
EA+ M H+ ER RR ++N+ LRS++P K D+ SI+ AI++ + LE ++
Sbjct: 82 EAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLL 141
Query: 318 ELEAQR 323
LEAQ+
Sbjct: 142 SLEAQK 147
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H +ERRRR ++N +F TLR+++P+ +K DK S+L + + YF L+K ++++
Sbjct: 1353 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + +NH+ ER RR ++NE +LR+++P + + D+ SI+ AI Y + LE+ I+
Sbjct: 121 EIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQ 180
Query: 318 ELEAQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKV 377
LE+Q+ + S ++VE +H S +N D+ T D
Sbjct: 181 SLESQKRT------QQQSNSEVVENALNHLSGISSN------------DLWTTLEDQ--- 219
Query: 378 SSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
+ + T+ N V +++ C + G+L++ + +L L +
Sbjct: 220 TCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKL 259
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + M H+ ER RR ++N +LRS++PS+ + D+ SI+ AI++ + LE++++
Sbjct: 187 EIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQ 246
Query: 318 ELEAQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKV 377
LEAQ+ + + P+D R SNK+ K + S LK+
Sbjct: 247 SLEAQKRSQQSDDNKEQIPEDNSLRNIS--SNKLRASNK------------EEQSSKLKI 292
Query: 378 SSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKS 437
+ T+ ++ V ++I C+ + G+L+ + L L L+L I
Sbjct: 293 EA------TVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTV-----------LHLNI-- 333
Query: 438 KLTGPTNATA 447
T PTN +
Sbjct: 334 --TSPTNTSV 341
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + +NH+ ER RR ++NE +LR+++P + + D+ SI+ AI Y + LE+ I+
Sbjct: 172 EIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQ 231
Query: 318 ELEAQRDITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKV 377
LE+Q+ + S ++VE +H S +N D+ T D
Sbjct: 232 SLESQKRT------QQQSNSEVVENALNHLSGISSN------------DLWTTLEDQ--- 270
Query: 378 SSTNDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNI 417
+ + T+ N V +++ C + G+L++ + +L L +
Sbjct: 271 TCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKL 310
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL 319
H L ER+RR + N++ L+ ++P+ KDDK S+LD+AI+Y R+L+ +++ +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 269 VLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQRDITNV 328
++SERRRR ++ ++ LRS+VP+ K DK SI+ DA+ Y + L+ + ++L++ DI +
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKS--DIAGL 190
Query: 329 ETRAKSS 335
E S+
Sbjct: 191 EASLNST 197
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQR 323
H ++ER RR ++ ER +L+ +VP+ K DK S+LD+ IEY R L+ +++ L R
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSR 165
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 13/196 (6%)
Query: 266 MNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIRELEAQR 323
M H+ ER RR ++NE LRS++P + D+ SI+ AI Y + LE ++ +E
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPV 184
Query: 324 DITNVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKVSSTNDV 383
+T A D + TS S ++ + A ++
Sbjct: 185 KTATEDTGAG---HDQTKTTSASSSGPFSDF-------FAFPQYSNRPTSAAAAEGMAEI 234
Query: 384 TITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSKL-TGP 442
+TM ++ ++I R +L++++ ++ SL + + T D + +I K+ G
Sbjct: 235 EVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGS 294
Query: 443 TNATAKRIKQALQKVV 458
T + I A+ +++
Sbjct: 295 QLNTVEDIAAAVNQIL 310
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 260 EADENGMNHVLSERRRRAKLNERFLTLRSMVPSNI--KDDKVSILDDAIEYFRSLEKRIR 317
E + M H+ ER RR ++NE +LRS++P + + D+ SI+ AI++ + LE+ ++
Sbjct: 109 EVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQ 168
Query: 318 ELEAQR 323
LEA++
Sbjct: 169 SLEAEK 174
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 271 SERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIREL----EAQRDIT 326
+ER RR N+RF L++++P+ K D+ SI+ +AI+Y + L + I E E +R
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGR 310
Query: 327 NVETRAKSSPQDMVERTSDHYSNKINNGKKSVVKKRKICDMEKTNSDALKV------SST 380
+ + + + +N +S V + C K N+++L+ S
Sbjct: 311 FRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQS--C-FNKNNNNSLRCSWLKRKSKV 367
Query: 381 NDVTITMNDNDVVIEITCSPRAGRLMEIMEALNSLNIYFKSVQSTEADGHLYLTIKSKLT 440
+V + + D++V I++ + L+ + L+ L + V + H +K+
Sbjct: 368 TEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIC 427
Query: 441 GPTNATAKRIKQALQKVVLK 460
+ A I L +VV K
Sbjct: 428 EGSCVYASGIADTLMEVVEK 447
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 268 HVLSERRRRAKLNERFLTLRSMVPSNIKDDKVSILDDAIEYFRSLEKRIRELEAQR 323
H ++ER RR ++ ER +L+ +VP+ K DK S+LD+ I+Y + L+ +++ L R
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 196