Miyakogusa Predicted Gene

Lj4g3v2962380.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2962380.1 Non Chatacterized Hit- tr|D7M4M1|D7M4M1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,59.41,2e-18,seg,NULL; ENOD93,Early nodulin 93 ENOD93 protein;
Q9SBR6_MEDVA_Q9SBR6;,Early nodulin 93 ENOD93 prote,CUFF.51919.1
         (120 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25940.1 | Symbols:  | early nodulin-related | chr5:9054252-9...    61   2e-10

>AT5G25940.1 | Symbols:  | early nodulin-related |
           chr5:9054252-9055151 REVERSE LENGTH=115
          Length = 115

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 1/110 (0%)

Query: 9   DMWVSKSKTPFLIASPAEESKLLRSKQCTNEGVRAGFKAATIACVSSAVPTLAAVRIIPW 68
           +M   + +  F+IASP E +K+ R++     G  AG KAA +A V+SA+PT+AAVR+ PW
Sbjct: 6   EMGNRRQQNLFVIASPDEIAKIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPW 65

Query: 69  AKANLNYTXXXXXXXXXXXXXXXXXXDKTILECARKNARLQ-DSLRHDNK 117
           AKANLNYT                  DKTIL+ AR+N   Q   ++ D+K
Sbjct: 66  AKANLNYTAQALIISSASIAAFFITADKTILQGARRNTEAQLKKVQQDSK 115