Miyakogusa Predicted Gene

Lj4g3v2951170.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2951170.2 Non Chatacterized Hit- tr|I1K6K2|I1K6K2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22404
PE,89.25,0,DEHYDRATASE_SER_THR,Serine/threonine dehydratase,
pyridoxal-phosphate-binding site; Tryptophan synth,CUFF.51903.2
         (335 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11640.1 | Symbols: ATSR, SR | serine racemase | chr4:7021770...   488   e-138
AT3G10050.1 | Symbols: OMR1 | L-O-methylthreonine resistant 1 | ...   109   2e-24

>AT4G11640.1 | Symbols: ATSR, SR | serine racemase |
           chr4:7021770-7023252 FORWARD LENGTH=331
          Length = 331

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 240/330 (72%), Positives = 283/330 (85%)

Query: 6   QITKGKYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGAFKFR 65
           +  + KYAADI SIKEAHDRIK  +  TPVL+S SLN+ISGR L+ KCEC QKGGAFKFR
Sbjct: 2   EANREKYAADILSIKEAHDRIKPYIHRTPVLTSESLNSISGRSLFFKCECLQKGGAFKFR 61

Query: 66  GACNAVFSLNDEDASKGVITHSSGNHXXXXXXXXKLRGIPAYIVIPKNAPTCKVENVKRY 125
           GACNAV SL+ E A+KGV+THSSGNH        K++GIPAYIV+PK AP CKV+NV RY
Sbjct: 62  GACNAVLSLDAEQAAKGVVTHSSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRY 121

Query: 126 GGQVIWSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPHIDTLV 185
           GG+VIWS+A+M SRE+ A KVLQETG++LIHPYNDGRI+SGQGTI+LE LEQ+  ID +V
Sbjct: 122 GGKVIWSEATMSSREEIASKVLQETGSVLIHPYNDGRIISGQGTIALELLEQIQEIDAIV 181

Query: 186 VPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRA 245
           VPISGGGLISGVALAAKSI P+IRI+AAEPKGADDAAQSK AG+IITLP TNTIADGLRA
Sbjct: 182 VPISGGGLISGVALAAKSIKPSIRIIAAEPKGADDAAQSKVAGKIITLPVTNTIADGLRA 241

Query: 246 FLGDFTWPVVRDLVEDIITVDDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNP 305
            LGD TWPVVRDLV+D++T+++ EII+AMK+C+EILKV VEPSGAIGLAAVLS++F+ NP
Sbjct: 242 SLGDLTWPVVRDLVDDVVTLEECEIIEAMKMCYEILKVSVEPSGAIGLAAVLSNSFRNNP 301

Query: 306 AWKDCNHIGIVVSGGNVDLAVLWDSFNKAK 335
           + +DC +IGIV+SGGNVDL  LWDSF  +K
Sbjct: 302 SCRDCKNIGIVLSGGNVDLGSLWDSFKSSK 331


>AT3G10050.1 | Symbols: OMR1 | L-O-methylthreonine resistant 1 |
           chr3:3099164-3101741 REVERSE LENGTH=592
          Length = 592

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 150/294 (51%), Gaps = 5/294 (1%)

Query: 33  TPVLSSASLNAISGRQLYLKCECFQKGGAFKFRGACNAVFSLNDEDASKGVITHSSGNHX 92
           +P+  +  L+   G ++YLK E  Q   +FK RGA N +  L  +  +KGVI  S+GNH 
Sbjct: 111 SPLQLAKKLSKRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHA 170

Query: 93  XXXXXXXKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSDASMQSREDTAKKVLQETGA 152
                     G  A IV+P   P  K + V+  G  V+    S    +  AK   +E G 
Sbjct: 171 QGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGL 230

Query: 153 ILIHPYNDGRILSGQGTISLEFLEQVP-HIDTLVVPISGGGLISGVALAAKSINPAIRIL 211
             I P++   +++GQGT+ +E   Q    +  + VP+ GGGLI+G+A   K ++P ++I+
Sbjct: 231 TFIPPFDHPDVIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKII 290

Query: 212 AAEPKGADDAAQSKAAGRIITLPETNTIADGLRA-FLGDFTWPVVRDLVEDIITVDDSEI 270
             EP  A+  A S   G  + L +    ADG+    +G+ T+ + R+L++ ++ V    I
Sbjct: 291 GVEPADANAMALSLHHGERVILDQVGGFADGVAVKEVGEETFRISRNLMDGVVLVTRDAI 350

Query: 271 IKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDL 324
             ++K  FE  + ++EP+GA+  A   ++ + K    KD N + I  SG N++ 
Sbjct: 351 CASIKDMFEEKRNILEPAGAL--ALAGAEAYCKYYGLKDVNVVAI-TSGANMNF 401