Miyakogusa Predicted Gene

Lj4g3v2951040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2951040.1 Non Chatacterized Hit- tr|K4CIT3|K4CIT3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40,2e-18,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT
ALPHA,NULL; TRANSLATION INITIATION FACTOR
EIF-2B,Initia,NODE_33481_length_478_cov_109.451881.path2.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63410.1 | Symbols:  | Protein of unknown function (DUF567) |...   119   7e-28
AT3G14260.1 | Symbols:  | Protein of unknown function (DUF567) |...   105   1e-23
AT1G53900.1 | Symbols:  | Eukaryotic translation initiation fact...    94   3e-20
AT1G53880.1 | Symbols:  | Eukaryotic translation initiation fact...    94   3e-20
AT1G53890.2 | Symbols:  | Protein of unknown function (DUF567) |...    90   6e-19
AT1G53870.2 | Symbols:  | Protein of unknown function (DUF567) |...    90   6e-19
AT1G53870.1 | Symbols:  | Protein of unknown function (DUF567) |...    89   8e-19
AT1G53890.1 | Symbols:  | Protein of unknown function (DUF567) |...    89   8e-19
AT1G53890.3 | Symbols:  | Protein of unknown function (DUF567) |...    80   4e-16
AT2G38640.1 | Symbols:  | Protein of unknown function (DUF567) |...    60   6e-10
AT5G41590.1 | Symbols:  | Protein of unknown function (DUF567) |...    59   1e-09
AT1G80120.1 | Symbols:  | Protein of unknown function (DUF567) |...    54   5e-08
AT3G15810.1 | Symbols:  | Protein of unknown function (DUF567) |...    52   2e-07

>AT1G63410.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:23510075-23511997 REVERSE LENGTH=208
          Length = 208

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 100/149 (67%), Gaps = 4/149 (2%)

Query: 1   MAKIFPQESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYDRKGTREV 60
           MA++FPQ + SS  +++ERET+T+WMKSLV  +NG TVY+SNG+I YRV+NYD K + EV
Sbjct: 1   MARVFPQAAISSPYMSTERETFTVWMKSLVYQTNGLTVYNSNGEITYRVENYD-KCSNEV 59

Query: 61  NLMDLRGKVLCTI-KKRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCNTGKVACQIKVG 119
           ++MDL G +L TI KK+L   GSW  +R C + + T + +P  ++KR +      +++  
Sbjct: 60  HIMDLHGNILFTIRKKKLWLFGSWYVYRECGSFTSTEEVKPCARIKRSSIRDGDWEVRDE 119

Query: 120 CQK-YCIVRISGKAAAFKIVTKDGHIVAE 147
             + + I+R   K  AF+I+   G+I+A+
Sbjct: 120 TNEVFWILRFDPK-FAFQIIDIHGNIIAQ 147


>AT3G14260.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr3:4747986-4748779 REVERSE LENGTH=230
          Length = 230

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 77/113 (68%), Gaps = 8/113 (7%)

Query: 1   MAKIFPQ-------ESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYD 53
           M KI P        E TSS  + +E+E++T+WMKSLV ++NGCTV+DS G+I+YRVDNY+
Sbjct: 23  MVKIHPDLTTSGAGEETSSPYLTTEQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYN 82

Query: 54  RKGTREVNLMDLRGKVLCTIKKRLLAI-GSWEGHRYCSNSSYTSQEQPWFQVK 105
            K  REV LMDL G VL T++++   +  +WEG+R  S +  ++ +  +F+VK
Sbjct: 83  SKSCREVYLMDLSGHVLFTLRRQKFGLFKTWEGYRSSSATVESTTKLEYFRVK 135


>AT1G53900.1 | Symbols:  | Eukaryotic translation initiation
          factor 2B (eIF-2B) family protein |
          chr1:20127634-20130834 FORWARD LENGTH=580
          Length = 580

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 11/97 (11%)

Query: 1  MAKIFPQ----------ESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
          M KI P           E  +S  + +E+E++T+WM+SLV HS GCTV+DS G+++YRVD
Sbjct: 1  MVKIHPDKAFPVDFSVGEGKTSPYLTTEKESFTIWMRSLVFHSKGCTVFDSKGNLIYRVD 60

Query: 51 NYDRKGTREVNLMDLRGKVLCTIKKRLLAI-GSWEGH 86
          NY+ K   EV LMDL GK+L T++++ L +  SW+G+
Sbjct: 61 NYNSKSCSEVYLMDLYGKILFTLRQKKLGLFKSWKGY 97


>AT1G53880.1 | Symbols:  | Eukaryotic translation initiation
          factor 2B (eIF-2B) family protein |
          chr1:20115069-20118269 FORWARD LENGTH=580
          Length = 580

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 11/97 (11%)

Query: 1  MAKIFPQ----------ESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
          M KI P           E  +S  + +E+E++T+WM+SLV HS GCTV+DS G+++YRVD
Sbjct: 1  MVKIHPDKAFPVDFSVGEGKTSPYLTTEKESFTIWMRSLVFHSKGCTVFDSKGNLIYRVD 60

Query: 51 NYDRKGTREVNLMDLRGKVLCTIKKRLLAI-GSWEGH 86
          NY+ K   EV LMDL GK+L T++++ L +  SW+G+
Sbjct: 61 NYNSKSCSEVYLMDLYGKILFTLRQKKLGLFKSWKGY 97


>AT1G53890.2 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:20124860-20125659 FORWARD LENGTH=202
          Length = 202

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 15/161 (9%)

Query: 1   MAKIFPQESTSSEC----------INSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
           M KI+P  +   +           + +E+E +T+WMKSLV +S GCTV+DS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 51  NYDRKG-TREVNLMDLRGKVLCTIK-KRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN 108
           NYD K  + EV  MDL GK+L T++ K+L    SWEG+          +       +  +
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132

Query: 109 TGKVACQIKV--GCQKYCIVRISGKAAAFKIVTKDGHIVAE 147
           + KV    ++  G Q+ C  +I  + + F I    G ++AE
Sbjct: 133 SYKVVMGSRIVDGDQQSC-YKIVNRGSVFAIKDGSGRLMAE 172


>AT1G53870.2 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:20112295-20113094 FORWARD LENGTH=202
          Length = 202

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 15/161 (9%)

Query: 1   MAKIFPQESTSSEC----------INSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
           M KI+P  +   +           + +E+E +T+WMKSLV +S GCTV+DS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 51  NYDRKG-TREVNLMDLRGKVLCTIK-KRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN 108
           NYD K  + EV  MDL GK+L T++ K+L    SWEG+          +       +  +
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132

Query: 109 TGKVACQIKV--GCQKYCIVRISGKAAAFKIVTKDGHIVAE 147
           + KV    ++  G Q+ C  +I  + + F I    G ++AE
Sbjct: 133 SYKVVMGSRIVDGDQQSC-YKIVNRGSVFAIKDGSGRLMAE 172


>AT1G53870.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:20112295-20113057 FORWARD LENGTH=217
          Length = 217

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 15/161 (9%)

Query: 1   MAKIFPQESTSSEC----------INSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
           M KI+P  +   +           + +E+E +T+WMKSLV +S GCTV+DS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 51  NYDRKG-TREVNLMDLRGKVLCTIK-KRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN 108
           NYD K  + EV  MDL GK+L T++ K+L    SWEG+          +       +  +
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132

Query: 109 TGKVACQIKV--GCQKYCIVRISGKAAAFKIVTKDGHIVAE 147
           + KV    ++  G Q+ C  +I  + + F I    G ++AE
Sbjct: 133 SYKVVMGSRIVDGDQQSC-YKIVNRGSVFAIKDGSGRLMAE 172


>AT1G53890.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:20124860-20125622 FORWARD LENGTH=217
          Length = 217

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 15/161 (9%)

Query: 1   MAKIFPQESTSSEC----------INSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
           M KI+P  +   +           + +E+E +T+WMKSLV +S GCTV+DS G+++YRVD
Sbjct: 13  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72

Query: 51  NYDRKG-TREVNLMDLRGKVLCTIK-KRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN 108
           NYD K  + EV  MDL GK+L T++ K+L    SWEG+          +       +  +
Sbjct: 73  NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132

Query: 109 TGKVACQIKV--GCQKYCIVRISGKAAAFKIVTKDGHIVAE 147
           + KV    ++  G Q+ C  +I  + + F I    G ++AE
Sbjct: 133 SYKVVMGSRIVDGDQQSC-YKIVNRGSVFAIKDGSGRLMAE 172


>AT1G53890.3 | Symbols:  | Protein of unknown function (DUF567) |
          chr1:20124896-20125995 FORWARD LENGTH=231
          Length = 231

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 11/85 (12%)

Query: 1  MAKIFPQESTSSEC----------INSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVD 50
          M KI+P  +   +           + +E+E +T+WMKSLV +S GCTV+DS G+++YRVD
Sbjct: 1  MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 60

Query: 51 NYDRKG-TREVNLMDLRGKVLCTIK 74
          NYD K  + EV  MDL GK+L T++
Sbjct: 61 NYDSKSWSNEVYFMDLNGKILFTLR 85


>AT2G38640.1 | Symbols:  | Protein of unknown function (DUF567) |
          chr2:16157725-16158474 REVERSE LENGTH=196
          Length = 196

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%)

Query: 5  FPQESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYDRKGTREVNLMD 64
          FP     S C +      T+W KSL+ + +G TVY++NG++V+RVDNY       + LMD
Sbjct: 8  FPSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMD 67

Query: 65 LRGKVLCTIKKRLLAIG 81
            G  L +I+++ L++G
Sbjct: 68 ASGFPLLSIRRKKLSLG 84


>AT5G41590.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr5:16632221-16633896 REVERSE LENGTH=221
          Length = 221

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 2/65 (3%)

Query: 21  TYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYDRKGTREVNLMDLRGKVLCTI--KKRLL 78
           T T+W KSL++   G TV DSNGD++YRVDNY R    E+ LMD  G  L  +   K++ 
Sbjct: 38  TLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKIT 97

Query: 79  AIGSW 83
            + SW
Sbjct: 98  LVDSW 102


>AT1G80120.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr1:30139198-30139986 FORWARD LENGTH=210
          Length = 210

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 13/124 (10%)

Query: 11  SSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYDRKGTR---EVNLMDLRG 67
             E I+ E  + T+   SL    +G TVYD  G +V+RVD+Y    TR   EV LMD  G
Sbjct: 8   DDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHG 67

Query: 68  KVLCTI-KKRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN-TGKVACQIKV----GCQ 121
           + L T+ +KR      WEG+        +  ++P F V+R +  G+ +  ++V     C 
Sbjct: 68  RCLLTLRRKRPSLRRRWEGYL----GERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQCS 123

Query: 122 KYCI 125
           +Y I
Sbjct: 124 EYLI 127


>AT3G15810.1 | Symbols:  | Protein of unknown function (DUF567) |
           chr3:5348054-5349178 REVERSE LENGTH=220
          Length = 220

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 18  ERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNY--DRKGTREVNLMDLRGKVLCTIK- 74
           E +  T+   SL    +G   YD  GDI++RVD+Y  D +   E+ LMD  GK L T+K 
Sbjct: 29  EDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKR 88

Query: 75  KRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCN-TGKVACQIKV 118
           KR      WEG         +  ++P F V+R +  G+   +++V
Sbjct: 89  KRPTLHQRWEGFL----GERSEGQKPIFSVRRSSIIGRCTMEVEV 129