Miyakogusa Predicted Gene
- Lj4g3v2949790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2949790.1 Non Chatacterized Hit- tr|I1KS03|I1KS03_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.48,0,U-box,U box
domain; KAP,NULL; no description,Zinc finger, RING/FYVE/PHD-type; no
description,Armadil,CUFF.51878.1
(556 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 641 0.0
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 632 0.0
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 603 e-172
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 603 e-172
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 134 2e-31
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 134 2e-31
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 125 8e-29
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 124 2e-28
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 117 2e-26
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 115 8e-26
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 113 4e-25
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 113 4e-25
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 113 5e-25
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 107 2e-23
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 105 1e-22
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 102 9e-22
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 101 1e-21
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 101 1e-21
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 100 3e-21
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 97 3e-20
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 93 6e-19
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 93 6e-19
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 91 3e-18
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 90 4e-18
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 89 7e-18
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 89 7e-18
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 88 1e-17
AT5G14510.1 | Symbols: | ARM repeat superfamily protein | chr5:... 86 7e-17
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 86 9e-17
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 85 1e-16
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 84 3e-16
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 83 4e-16
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 82 7e-16
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 81 2e-15
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 80 3e-15
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 80 3e-15
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 80 5e-15
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 80 6e-15
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 76 6e-14
AT2G27430.1 | Symbols: | ARM repeat superfamily protein | chr2:... 76 6e-14
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 76 6e-14
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 75 1e-13
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 74 2e-13
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 72 8e-13
AT1G15165.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 70 3e-12
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 70 3e-12
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 70 4e-12
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 70 5e-12
AT1G08315.1 | Symbols: | ARM repeat superfamily protein | chr1:... 69 1e-11
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 68 1e-11
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 68 2e-11
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 67 2e-11
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 4e-11
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 65 1e-10
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 65 1e-10
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 65 2e-10
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 63 6e-10
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 63 6e-10
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 63 6e-10
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 62 1e-09
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 61 2e-09
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 60 4e-09
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 59 9e-09
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 59 1e-08
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 58 2e-08
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 57 2e-08
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 57 2e-08
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 57 3e-08
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 56 8e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 50 3e-06
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/568 (57%), Positives = 392/568 (69%), Gaps = 20/568 (3%)
Query: 1 MRKYSKLFRNEFSDDNDSQGSAPCSPTVQGSIEDGVPGGHGQAFDRQFSKLSSFNFKADN 60
MRKYSKLFR+E D+NDS S PCSPT QG ED V AF RQ SK S N+K N
Sbjct: 211 MRKYSKLFRSEMMDENDSPCSTPCSPTGQGPNEDRV-----NAFGRQLSKFGSINYKPMN 265
Query: 61 NRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQH 120
+R+SGQMP PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN+CPKTQQ+L H
Sbjct: 266 SRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPH 325
Query: 121 LCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWRLVLXXXXXXXXXXXXXXXXXXX 180
L LTPNYCVKGL+ASWCEQNG+ +P GPPESLDLNYWRL +
Sbjct: 326 LSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTP 385
Query: 181 XXXXXXPXXXXXXXXXXXXXXTEIVSAQEEDTE----QQYFSFLKVLTRGNNWKRKCXXX 236
P + + E D+E + Y L ++ + + +KC
Sbjct: 386 KDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVV 445
Query: 237 XXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNK 296
ARI MGANGFVEA LQFL+SAVH+ N AQE GAMALFNLAVNNN NK
Sbjct: 446 ENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNK 505
Query: 297 EMMLSAGVLPVLEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSH 356
E+ML++GV+P+LE+MIS + S G ATALYLNLSCLE+AKP+IG+SQAV F L D+
Sbjct: 506 ELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTK 565
Query: 357 IQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQ 416
QCK D+LHALYNLST S NIP LLSS II LQ +L G+ +W EK +AVL+NLA+S+
Sbjct: 566 TQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQ-VLASTGNHLWIEKSLAVLLNLASSR 624
Query: 417 AGREEMVSAPGLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVS 476
G+EEM++ G+IS LA++LD G+ + QEQA SCL+ILC SE C +MVLQEGVIP+LVS
Sbjct: 625 EGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVS 684
Query: 477 ISVNGTPRGREKAQKLLMLFREQRQRDHSPVETHQSPPET--------GDLSVPPAEMKP 528
ISVNG+PRGR+K+QKLLMLFREQR RD ++P +T +S P +E+KP
Sbjct: 685 ISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKP 744
Query: 529 LCKSMSRRKTM-KGFGFFWKTKSYSVYQ 555
L KS+SRRKTM + F F WK KS+S++
Sbjct: 745 LTKSISRRKTMTRPFSFLWK-KSHSIHH 771
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/577 (57%), Positives = 400/577 (69%), Gaps = 40/577 (6%)
Query: 1 MRKYSKLFRNEFSDDNDSQGSA--PCSPTVQGSIEDGVPGGHGQAFDRQFSKLSSFNFKA 58
MRKYSKLFR+E DDNDSQGS+ PCSPT+QGSI+D HG+AFDRQ SKLSSFNF++
Sbjct: 211 MRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDA----HGRAFDRQLSKLSSFNFRS 266
Query: 59 -DNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQK 117
+NNR S QM PPEELRCPISLQLMYDPVIIASGQTYER+CIEKWFSDGHNTCPKT Q+
Sbjct: 267 CNNNRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQ 326
Query: 118 LQHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWRLVLXXXXXXXXXXXXXXXX 177
L HLCLTPNYCVK L++SWCEQNGV +P+GPPESLDLNYWRL L
Sbjct: 327 LSHLCLTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGS 386
Query: 178 XXXXXXXXXPXXXXXXXXXXXXXXTEIVSAQEEDTEQQY-----------FSFLKVLTRG 226
P E + +EE E +Y L LT
Sbjct: 387 CKLKDVKVVPLE-------------ESGTIKEEACESEYQEDQVTLVERCTELLTTLTDV 433
Query: 227 NNWKRKCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALF 286
+ ++KC ARI MG NG VEALLQFL SA++E N AQ++GAMALF
Sbjct: 434 DTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALF 493
Query: 287 NLAVNNNGNKEMMLSAGVLPVLEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQF 346
NLAV+NN NKE+ML++G++P+LEEM+ N S+GS TA+YLNLSCLEEAKP+IG+S AV F
Sbjct: 494 NLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPF 553
Query: 347 LTQLHQSDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCI 406
+ L +++ +QCK D+LH+L++LST NIP LLS+ ++N LQSL + + WTEK +
Sbjct: 554 MVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISD-EQRWTEKSL 612
Query: 407 AVLINLATSQAGREEMVSAPGLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVL 466
AVL+NL ++AG++EMVSAP L+S L +ILD GE QEQA S LLILCN SE C EMVL
Sbjct: 613 AVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVL 672
Query: 467 QEGVIPALVSISVNGTPRGREKAQKLLMLFREQRQRDHS----PVETHQSPPETGDLSVP 522
QEGVIP+LVSISVNGT RGRE+AQKLL LFRE RQRD + P T + PE G SV
Sbjct: 673 QEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDG-FSVA 731
Query: 523 PA---EMKPLCKSMSRRKTMKGFGFFWKTKSYSVYQC 556
A E KP CKS SR+K + F F WK+KS+SVYQC
Sbjct: 732 SAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 603 bits (1554), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/582 (56%), Positives = 384/582 (65%), Gaps = 37/582 (6%)
Query: 1 MRKYSKLFRNEFSDDNDSQGSAPCSPTV-QGSIEDGVPGGHGQAFDRQFSKLSSFNFKAD 59
MRK SKLFR+E D+NDS GS PCSP GS+ HG F RQ S+ S N K
Sbjct: 211 MRKCSKLFRSEILDENDSPGSYPCSPNEDHGSV-------HG--FGRQLSRFGSLNDKPM 261
Query: 60 NNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQ 119
N+ SGQMP PPEELRCPISLQLM DPVIIASGQTYERVCIEKWFSDGHNTCPKTQQ+L
Sbjct: 262 NSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP 321
Query: 120 HLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWRLVLXXXXXXXXXXXXXXXXXX 179
H+ LTPN CVKGL+ASWCEQNG IP GPPES DL+YWRL L
Sbjct: 322 HISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYK 381
Query: 180 XXXXXXXPXXXXXXXXXXXXXXTEIVSAQEE-------DTEQQYFSFLKVLTRGNNWKRK 232
P E + ++ + ++Y L VL ++K
Sbjct: 382 LKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK 441
Query: 233 CXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNN 292
C ARIFMGANGFVEALL+FL SAV + N AQ+ GAMALFNLAVNN
Sbjct: 442 CKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNN 501
Query: 293 NGNKEMMLSAGVLPVLEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQ 352
N NKE+ML++GV+ +LE+MIS+ S+GSATALYLNLSCL+EAK +IG+SQAV FL QL Q
Sbjct: 502 NRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQ 561
Query: 353 SDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINL 412
+ QCK D+LHALYNLST S NIP LLSS II LQ LL G+ +W EK +AVL+NL
Sbjct: 562 KEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNL 621
Query: 413 ATSQAGREEMVSAPGLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIP 472
A+SQ G++E VS+ G+IS+LA++LD+G+ QEQA SCLLILCN E C +MVLQEGVIP
Sbjct: 622 ASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIP 681
Query: 473 ALVSISVNGTPRGREKAQKLLMLFREQRQRDHSPVETHQSPPET----GDLSVP------ 522
+LVSISVNGTPRGREK+QKLLMLFRE+RQ+ P PP+ LS P
Sbjct: 682 SLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGS 741
Query: 523 -PA-------EMKPLCKSMSRRKTM-KGFGFFWKTKSYSVYQ 555
PA E + L KSMSRRK+M + F FFWK KSYSV +
Sbjct: 742 TPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 603 bits (1554), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/582 (56%), Positives = 384/582 (65%), Gaps = 37/582 (6%)
Query: 1 MRKYSKLFRNEFSDDNDSQGSAPCSPTV-QGSIEDGVPGGHGQAFDRQFSKLSSFNFKAD 59
MRK SKLFR+E D+NDS GS PCSP GS+ HG F RQ S+ S N K
Sbjct: 211 MRKCSKLFRSEILDENDSPGSYPCSPNEDHGSV-------HG--FGRQLSRFGSLNDKPM 261
Query: 60 NNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQ 119
N+ SGQMP PPEELRCPISLQLM DPVIIASGQTYERVCIEKWFSDGHNTCPKTQQ+L
Sbjct: 262 NSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP 321
Query: 120 HLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWRLVLXXXXXXXXXXXXXXXXXX 179
H+ LTPN CVKGL+ASWCEQNG IP GPPES DL+YWRL L
Sbjct: 322 HISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYK 381
Query: 180 XXXXXXXPXXXXXXXXXXXXXXTEIVSAQEE-------DTEQQYFSFLKVLTRGNNWKRK 232
P E + ++ + ++Y L VL ++K
Sbjct: 382 LKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK 441
Query: 233 CXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNN 292
C ARIFMGANGFVEALL+FL SAV + N AQ+ GAMALFNLAVNN
Sbjct: 442 CKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNN 501
Query: 293 NGNKEMMLSAGVLPVLEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQ 352
N NKE+ML++GV+ +LE+MIS+ S+GSATALYLNLSCL+EAK +IG+SQAV FL QL Q
Sbjct: 502 NRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQ 561
Query: 353 SDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINL 412
+ QCK D+LHALYNLST S NIP LLSS II LQ LL G+ +W EK +AVL+NL
Sbjct: 562 KEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNL 621
Query: 413 ATSQAGREEMVSAPGLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIP 472
A+SQ G++E VS+ G+IS+LA++LD+G+ QEQA SCLLILCN E C +MVLQEGVIP
Sbjct: 622 ASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIP 681
Query: 473 ALVSISVNGTPRGREKAQKLLMLFREQRQRDHSPVETHQSPPET----GDLSVP------ 522
+LVSISVNGTPRGREK+QKLLMLFRE+RQ+ P PP+ LS P
Sbjct: 682 SLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGS 741
Query: 523 -PA-------EMKPLCKSMSRRKTM-KGFGFFWKTKSYSVYQ 555
PA E + L KSMSRRK+M + F FFWK KSYSV +
Sbjct: 742 TPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 137/254 (53%), Gaps = 11/254 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
RI +G +G + L++ L S + QE AL NL++N+N NK+ + AG + L
Sbjct: 576 RIVIGNSGAIVLLVELLYST----DSATQENAVTALLNLSINDN-NKKAIADAGAIEPLI 630
Query: 310 EMISNTSSYG--SATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
++ N SS ++ A +LS +EE K IG S A+ L L + + K+D+ AL
Sbjct: 631 HVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDL-LGNGTPRGKKDAATAL 689
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NLS N ++ SG + L L+ V +K +AVL NLAT GR + G
Sbjct: 690 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMV--DKAVAVLANLATIPEGRN-AIGQEG 746
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
I L ++++G +E AA+ LL L S + C MVLQEG +P LV++S +GTPR RE
Sbjct: 747 GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRARE 806
Query: 488 KAQKLLMLFREQRQ 501
KAQ LL FR QR
Sbjct: 807 KAQALLSYFRNQRH 820
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 76 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLVAS 135
CP+SL++M DPVI++SGQTYE+ I++W G CPKT+Q L H L PNY VK L+A+
Sbjct: 236 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 295
Query: 136 WCEQNGVPIPEGPPESLDLN 155
WCE N V +P+ P +S LN
Sbjct: 296 WCETNDVKLPD-PNKSTSLN 314
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 137/254 (53%), Gaps = 11/254 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
RI +G +G + L++ L S + QE AL NL++N+N NK+ + AG + L
Sbjct: 579 RIVIGNSGAIVLLVELLYST----DSATQENAVTALLNLSINDN-NKKAIADAGAIEPLI 633
Query: 310 EMISNTSSYG--SATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
++ N SS ++ A +LS +EE K IG S A+ L L + + K+D+ AL
Sbjct: 634 HVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDL-LGNGTPRGKKDAATAL 692
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NLS N ++ SG + L L+ V +K +AVL NLAT GR + G
Sbjct: 693 FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMV--DKAVAVLANLATIPEGRN-AIGQEG 749
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
I L ++++G +E AA+ LL L S + C MVLQEG +P LV++S +GTPR RE
Sbjct: 750 GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRARE 809
Query: 488 KAQKLLMLFREQRQ 501
KAQ LL FR QR
Sbjct: 810 KAQALLSYFRNQRH 823
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 76 CPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLVAS 135
CP+SL++M DPVI++SGQTYE+ I++W G CPKT+Q L H L PNY VK L+A+
Sbjct: 239 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 298
Query: 136 WCEQNGVPIPEGPPESLDLN 155
WCE N V +P+ P +S LN
Sbjct: 299 WCETNDVKLPD-PNKSTSLN 317
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 9/101 (8%)
Query: 60 NNRESGQ--------MPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTC 111
N+R +GQ +P P++ RCPISL++M DPVI++SGQTYER CIEKW GH+TC
Sbjct: 238 NSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTC 297
Query: 112 PKTQQKLQHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESL 152
PKTQQ L LTPNY ++ L+A WCE N + P+ PP SL
Sbjct: 298 PKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPK-PPSSL 337
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 10/246 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ + G + L+ L + + QE AL NL++ N NK ++SAG +P +
Sbjct: 387 RVAIAEAGAIPLLVGLLSTP----DSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIV 441
Query: 310 EMISNTS--SYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
+++ S + +A A +LS ++E K IG A+ L L + + K+D+ AL
Sbjct: 442 QVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQ-RGKKDAATAL 500
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + +G+I L LL + G + E +A+L L++ G+ ++ +
Sbjct: 501 FNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDE-ALAILAILSSHPEGKA-IIGSSD 558
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
+ +L + G +E AA+ L+ LC+ + + G++ L+ ++ NGT RG+
Sbjct: 559 AVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKR 618
Query: 488 KAQKLL 493
KA +LL
Sbjct: 619 KAAQLL 624
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 52 SSFNFKADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTC 111
SS D++R+ M PPEE RCPISL+LM DPVI++SGQTYER CI+KW GH TC
Sbjct: 241 SSLPKSRDDDRD---MLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTC 297
Query: 112 PKTQQKLQHLCLTPNYCVKGLVASWCEQNGVPIPEGP 148
PKTQ+ L +TPNY ++ L+A WCE NG+ P+ P
Sbjct: 298 PKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRP 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ + A+G + L+ L + + QE ++ NL++ +++ S+G +P +
Sbjct: 390 RVAIAASGAIPLLVNLLTIS---NDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIV 446
Query: 310 EMISNTS--SYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
++ S + +A A +LS ++E K IG + A+ L L S + K+D+ AL
Sbjct: 447 HVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQ-RGKKDAATAL 505
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + +G++ L LL + + ++ +++L L++ G+ E V A
Sbjct: 506 FNLCIFQGNKGKAVRAGLVPVLMRLLTEP-ESGMVDESLSILAILSSHPDGKSE-VGAAD 563
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
+ L + G +E +A+ L+ LC+ +++ + G++ L+ ++ NGT RG+
Sbjct: 564 AVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKR 623
Query: 488 KAQKLLMLFRE--QRQRDHSPVE 508
KA +LL F +Q+ HS +E
Sbjct: 624 KAAQLLNRFSRFNDQQKQHSGLE 646
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 68 PFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNY 127
P PE RCPISL+LM DPVI+++GQTYER I+KW GH TCPK+Q+ L H LTPNY
Sbjct: 246 PVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNY 305
Query: 128 CVKGLVASWCEQNGVPIPE 146
+K L+A WCE NG+ +P+
Sbjct: 306 VLKSLIALWCESNGIELPQ 324
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 10/251 (3%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ + G + L++ L S + QE AL NL++N GNK ++ AG + +
Sbjct: 380 RVCIAEAGAIPLLVELLSSP----DPRTQEHSVTALLNLSINE-GNKGAIVDAGAITDIV 434
Query: 310 EMISNTS--SYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
E++ N S + +A A +LS ++E K IG + A+Q L L + + + K+D+ A+
Sbjct: 435 EVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTR-RGKKDAATAI 493
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + GI++ L LL D G + E +A+L L+T+Q G+ + A
Sbjct: 494 FNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDE-ALAILAILSTNQEGKTAIAEAES 552
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
I L I+ G +E AA+ L LC + + + + G AL ++ NGT R +
Sbjct: 553 -IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKR 611
Query: 488 KAQKLLMLFRE 498
KA LL L ++
Sbjct: 612 KAASLLELIQQ 622
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P E CPI+L++M DPVIIA+GQTYE+ I+KWF GH TCPKT+Q+L HL L PN+ +K
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 131 GLVASWCEQNGVPIPE 146
L+ WCE+N IPE
Sbjct: 351 NLIMQWCEKNNFKIPE 366
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ + G + L+Q L S G QE L NL+++ NK+++ + G +P +
Sbjct: 414 RVLIANAGAIPLLVQLL-SYPDSG---IQENAVTTLLNLSIDE-VNKKLISNEGAIPNII 468
Query: 310 EMISN---TSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHA 366
E++ N + SA AL+ +LS L+E K IG S + L L Q + ++ K+D+L A
Sbjct: 469 EILENGNREARENSAAALF-SLSMLDENKVTIGLSNGIPPLVDLLQHGT-LRGKKDALTA 526
Query: 367 LYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAP 426
L+NLS S N + +GI+ L +LL D+ + E +L+ + + GR + +
Sbjct: 527 LFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPE-GR-QAIGQL 584
Query: 427 GLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGR 486
I L + G +E A S LL L + + LQ GV LV I+ +GT R +
Sbjct: 585 SFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQ 644
Query: 487 EKAQKLLMLFREQRQ 501
KA L+ L + Q
Sbjct: 645 RKANALIQLISKSEQ 659
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ +G G + LL L S + QE AL NL+++ NK M++ G + L
Sbjct: 471 RVHIGRCGAITPLLSLLYSE----EKLTQEHAVTALLNLSISE-LNKAMIVEVGAIEPLV 525
Query: 310 EMIS--NTSSYGSATALYLNLSCLEEAKPMIGTSQA-VQFLTQLHQSDSHIQCKQDSLHA 366
+++ N + ++ A +LS L+ + IG S A +Q L L + + K+D+ A
Sbjct: 526 HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGT-FRGKKDAASA 584
Query: 367 LYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAP 426
L+NLS N ++ + + L LL D +K +A+L NL+ GR+ +V
Sbjct: 585 LFNLSITHDNKARIVQAKAVKYLVELL--DPDLEMVDKAVALLANLSAVGEGRQAIVREG 642
Query: 427 GLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGR 486
G I L +D+G +E AAS LL LC S K C +VLQEG IP LV++S +GT R +
Sbjct: 643 G-IPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAK 701
Query: 487 EKAQKLLMLFREQR 500
EKAQ+LL FR QR
Sbjct: 702 EKAQQLLSHFRNQR 715
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 67 MPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPN 126
+ PP RCP+S +LM DPVI+ASGQT++R I+KW +G CP+T+Q L H L PN
Sbjct: 200 ISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 258
Query: 127 YCVKGLVASWCEQNGVPI 144
Y VK ++ASW E N + +
Sbjct: 259 YTVKAMIASWLEANRINL 276
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ +G G + LL L S + QE AL NL+++ NK M++ G + L
Sbjct: 507 RVHIGRCGAITPLLSLLYSE----EKLTQEHAVTALLNLSISE-LNKAMIVEVGAIEPLV 561
Query: 310 EMIS--NTSSYGSATALYLNLSCLEEAKPMIGTSQA-VQFLTQLHQSDSHIQCKQDSLHA 366
+++ N + ++ A +LS L+ + IG S A +Q L L + + K+D+ A
Sbjct: 562 HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGT-FRGKKDAASA 620
Query: 367 LYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAP 426
L+NLS N ++ + + L LL D +K +A+L NL+ GR+ +V
Sbjct: 621 LFNLSITHDNKARIVQAKAVKYLVELL--DPDLEMVDKAVALLANLSAVGEGRQAIVREG 678
Query: 427 GLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGR 486
G I L +D+G +E AAS LL LC S K C +VLQEG IP LV++S +GT R +
Sbjct: 679 G-IPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAK 737
Query: 487 EKAQKLLMLFREQR 500
EKAQ+LL FR QR
Sbjct: 738 EKAQQLLSHFRNQR 751
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 67 MPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPN 126
+ PP RCP+S +LM DPVI+ASGQT++R I+KW +G CP+T+Q L H L PN
Sbjct: 236 ISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 127 YCVKGLVASWCEQNGVPI 144
Y VK ++ASW E N + +
Sbjct: 295 YTVKAMIASWLEANRINL 312
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 6/222 (2%)
Query: 285 LFNLAVNNNGNKEMMLSAGVLPVLEEMISN--TSSYGSATALYLNLSCLEEAKPMIGTSQ 342
L NL++N+N + S ++P++ + + + ++ A +LS +EE K IG +
Sbjct: 487 LLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAG 546
Query: 343 AVQFLTQLHQSDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWT 402
A++ L L S S + K+D+ AL+NLS N ++ +G + L L+ V
Sbjct: 547 AIEPLVDLLGSGS-LSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMV-- 603
Query: 403 EKCIAVLINLATSQAGREEMVSAPGLISALASILDIGELIVQEQAASCLLILCNRSEKCC 462
EK + VL NLAT + G+ + G I L ++++G +E A + LL LC S K C
Sbjct: 604 EKAVVVLANLATVREGKI-AIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFC 662
Query: 463 EMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRQRDH 504
V++EGVIP LV+++ +GT RG+EKAQ LL F+ RQ +
Sbjct: 663 NNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQ 704
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P + RC +SL+LM DPVI+ASGQT+ERV I+KW G CPKT+Q L H LTPN+ V+
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 131 GLVASWCEQNGVPIPEGPPESLDL 154
+ASWCE N V PP+ L+L
Sbjct: 301 AFLASWCETNNV----YPPDPLEL 320
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 54 FNFKADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPK 113
N D +++S ++ P + L CP+SL+LM DPVI+A+GQTYER I++W G+ TCPK
Sbjct: 226 VNKNTDESKKSDKLTIPVDFL-CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPK 284
Query: 114 TQQKLQHLCLTPNYCVKGLVASWCEQNGVPIPEG 147
TQQKL++ LTPNY ++ L++ WC ++ + P G
Sbjct: 285 TQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAG 318
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 9/251 (3%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
RI + G + L+ L S ++ QE + NL++ N NKE+++ AG + +
Sbjct: 366 RILIAEAGAIPVLVNLLTSE----DVATQENAITCVLNLSIYEN-NKELIMFAGAVTSIV 420
Query: 310 EMI--SNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
+++ + +A A +LS +E K +IG S A+ L L ++ + + K+D+ AL
Sbjct: 421 QVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTP-RGKKDAATAL 479
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + +GI+ L +L D ++ + +L LA +Q + +V A
Sbjct: 480 FNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANT 539
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
L AL IL + +E AA+ LL LC R + + + G + L+ +S NGT RG+
Sbjct: 540 L-PALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKR 598
Query: 488 KAQKLLMLFRE 498
KA LL L R+
Sbjct: 599 KAISLLELLRK 609
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
PEE RCP+S +LM DPV++ASGQTY+++ I+KW S G+ TCPKTQQ L H LTPN ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 131 GLVASWCEQNGV 142
+++ WC++NG+
Sbjct: 135 EMISKWCKKNGL 146
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 58 ADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQK 117
+D++++S + P E+ CPISL+LM DP I+++GQTYER I++W G+ +CPKTQQK
Sbjct: 84 SDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQK 142
Query: 118 LQHLCLTPNYCVKGLVASWCEQNGVPIPEG 147
L++ LTPNY ++ L++ WC ++ + P G
Sbjct: 143 LENFTLTPNYVLRSLISQWCTKHNIEQPGG 172
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 8/255 (3%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLP--V 307
RI + G + L++ L S +G+ QE + NL++ + NKE+++ AG + V
Sbjct: 228 RILIAEAGAIPVLVKLLTS---DGDTETQENAVTCILNLSIYEH-NKELIMLAGAVTSIV 283
Query: 308 LEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
L + + +A A +LS +E K +IG S A+ L L Q S ++ K+D+ AL
Sbjct: 284 LVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAATAL 342
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + +GI+ L +L D ++ + +L LA++Q + ++ A
Sbjct: 343 FNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANA 402
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
I L L + +E AA+ LL LC R + + + G + L+ +S +GT R +
Sbjct: 403 -IPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKR 461
Query: 488 KAQKLLMLFREQRQR 502
KA LL L R+ ++
Sbjct: 462 KANSLLELLRKSSRK 476
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 58 ADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQK 117
+D++++S + P E+ CPISL+LM DP I+++GQTYER I++W G+ +CPKTQQK
Sbjct: 232 SDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQK 290
Query: 118 LQHLCLTPNYCVKGLVASWCEQNGVPIPEG 147
L++ LTPNY ++ L++ WC ++ + P G
Sbjct: 291 LENFTLTPNYVLRSLISQWCTKHNIEQPGG 320
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 8/255 (3%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLP--V 307
RI + G + L++ L S +G+ QE + NL++ + NKE+++ AG + V
Sbjct: 376 RILIAEAGAIPVLVKLLTS---DGDTETQENAVTCILNLSIYEH-NKELIMLAGAVTSIV 431
Query: 308 LEEMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
L + + +A A +LS +E K +IG S A+ L L Q S ++ K+D+ AL
Sbjct: 432 LVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAATAL 490
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
+NL N + +GI+ L +L D ++ + +L LA++Q + ++ A
Sbjct: 491 FNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANA 550
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGRE 487
I L L + +E AA+ LL LC R + + + G + L+ +S +GT R +
Sbjct: 551 -IPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKR 609
Query: 488 KAQKLLMLFREQRQR 502
KA LL L R+ ++
Sbjct: 610 KANSLLELLRKSSRK 624
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 196/451 (43%), Gaps = 70/451 (15%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKG 131
++LRCPISL++M DPV++ SG TY+R I KWF+ G+ TCPKT + L L N+ VK
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 132 LVASWCEQNGVPIPEGPPESLDLNYWRLVLXXXXXXXXXXXXXXXXXXXXXXXXXPXXXX 191
++ S+ +QNGV + + + +D+
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDV-----------------------------AESLAAEE 370
Query: 192 XXXXXXXXXXTEIVSAQEEDTEQQYFSFLKVLTRGNNWKRKCXXXXXXXXXXXXXXXARI 251
E++ EE+ + +++LT+ + + R C
Sbjct: 371 AGKLTAEFLAGELIKGDEEEMVKALVE-IRILTKTSTFYRSCLVEA-------------- 415
Query: 252 FMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAG-----VLP 306
G VE+L++ L+S + QE + NL+ + G ++ G ++
Sbjct: 416 -----GVVESLMKILRS----DDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVE 466
Query: 307 VLEEMISNTSSYGSATALYLNLSCLEEAKPMIG-TSQAVQFLTQLHQS-DSHIQCKQDSL 364
VL + S +A AL+ LS L + +IG S A+ L ++ +S D K+++L
Sbjct: 467 VLNDGARRESRQYAAAALFY-LSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNAL 525
Query: 365 HALYN-LSTVSTNIPYLLSSGIINGLQSLLVDQ--GDCVWTEKCIAVLINLATSQAGREE 421
A+ + L N +L++GI+ L L+ + D V T +A+L +A G
Sbjct: 526 IAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGV-TADSMAILAKMAEYPDGMIS 584
Query: 422 MVSAPGLISALASILDIGEL--IVQEQAASCLLILCNR--SEKCCEMVLQEGVIPALVSI 477
++ GL A+ IL E+ ++ + LL LC+ S+ + ++ +L +
Sbjct: 585 VLRRGGLKLAV-KILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTA 643
Query: 478 SVNGTPRGREKAQKLLMLFREQRQRDHSPVE 508
S NG G +KA L+ + E ++R P E
Sbjct: 644 SSNGELGGGKKASALIKMIHEFQERKTGPGE 674
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P + RCPI+L+LM DPV++A+GQTY+R I+ W GHNTCPKT Q L+H L PN +K
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 131 GLVASWCEQNGVP 143
L+ WC +P
Sbjct: 335 NLIVLWCRDQKIP 347
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 12/254 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVL-PVL 308
RI + G ++ L+ + S+ +L QE G A+ NL++ + NKE + S+G + P++
Sbjct: 98 RIKIAKAGAIKPLISLISSS----DLQLQEYGVTAILNLSLCDE-NKESIASSGAIKPLV 152
Query: 309 E--EMISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHA 366
+M + T+ +A AL L LS +EE K IG S A+ L L ++ + K+D+ A
Sbjct: 153 RALKMGTPTAKENAACAL-LRLSQIEENKVAIGRSGAIPLLVNLLETGG-FRAKKDASTA 210
Query: 367 LYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAP 426
LY+L + N + SGI+ L L+ D G + + A +++L S + +
Sbjct: 211 LYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKS--AFVMSLLMSVPESKPAIVEE 268
Query: 427 GLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGR 486
G + L I+++G +E A S LL LC S MV +EG IP LV++S GT R +
Sbjct: 269 GGVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAK 328
Query: 487 EKAQKLLMLFREQR 500
+KA+ L+ L R+ R
Sbjct: 329 QKAEALIELLRQPR 342
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 30/311 (9%)
Query: 226 GNNWKRKCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAM-A 284
G + ++K AR+ + G + L+ S + + ++ +I ++ A
Sbjct: 154 GGDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLV----SMIDDSRIVDAQIASLYA 209
Query: 285 LFNLAVNNNGNKEMMLSAGVLPVLEEMIS--NTSSYGSATAL---YLNLSCLEEAKPMIG 339
L NL + N+ NK ++ AG + + ++I NT A A+ +L LS L+ KP+IG
Sbjct: 210 LLNLGIGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIG 269
Query: 340 TSQAVQFLTQLHQS---DSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQ 396
+S A+ FL + Q+ S Q ++D+L ALYNLS N+ ++L + +I L + L
Sbjct: 270 SSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTL--- 326
Query: 397 GDCVWTEKCIAVLINLATSQAGREEMVSAPGLI-SALASILDIGELI----VQEQAASCL 451
GD +E+ +A+L NL GR+ A GL+ A ++D+ QE+A L
Sbjct: 327 GDMEVSERILAILSNLVAVPEGRK----AIGLVCDAFPVLVDVLNWTDSPGCQEKATYIL 382
Query: 452 LILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRQRDHSPVETHQ 511
+++ ++ +++++ G+ AL+ +++ G+ +++A ++L R + + +
Sbjct: 383 MLMAHKGYGDRQVMIEAGIESALLELTLLGSALAQKRASRILECLRVDKGK-----QVLD 437
Query: 512 SPPETGDLSVP 522
S G LS P
Sbjct: 438 STGSCGALSAP 448
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 153/311 (49%), Gaps = 30/311 (9%)
Query: 226 GNNWKRKCXXXXXXXXXXXXXXXARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAM-A 284
G + ++K AR+ + G + L+ S + + ++ +I ++ A
Sbjct: 154 GGDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLV----SMIDDSRIVDAQIASLYA 209
Query: 285 LFNLAVNNNGNKEMMLSAGVLPVLEEMIS--NTSSYGSATAL---YLNLSCLEEAKPMIG 339
L NL + N+ NK ++ AG + + ++I NT A A+ +L LS L+ KP+IG
Sbjct: 210 LLNLGIGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIG 269
Query: 340 TSQAVQFLTQLHQS---DSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQ 396
+S A+ FL + Q+ S Q ++D+L ALYNLS N+ ++L + +I L + L
Sbjct: 270 SSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTL--- 326
Query: 397 GDCVWTEKCIAVLINLATSQAGREEMVSAPGLI-SALASILDIGELI----VQEQAASCL 451
GD +E+ +A+L NL GR+ A GL+ A ++D+ QE+A L
Sbjct: 327 GDMEVSERILAILSNLVAVPEGRK----AIGLVCDAFPVLVDVLNWTDSPGCQEKATYIL 382
Query: 452 LILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFREQRQRDHSPVETHQ 511
+++ ++ +++++ G+ AL+ +++ G+ +++A ++L R + + +
Sbjct: 383 MLMAHKGYGDRQVMIEAGIESALLELTLLGSALAQKRASRILECLRVDKGK-----QVLD 437
Query: 512 SPPETGDLSVP 522
S G LS P
Sbjct: 438 STGSCGALSAP 448
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 120/223 (53%), Gaps = 12/223 (5%)
Query: 284 ALFNLAVNNNGNKEMMLSAGVLPVLEEMIS-----NTSSYGSATALYLNLSCLEEAKPMI 338
AL NL + N+ NK ++ AGV+ + +++ N + + A +L LS L+ KP+I
Sbjct: 176 ALLNLGIGNDVNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPII 235
Query: 339 GTSQAVQFLTQL---HQSDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVD 395
G+S A+ FL + + S Q ++D+L ALYNLS N+ ++L + +I L + L
Sbjct: 236 GSSGAIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTL-- 293
Query: 396 QGDCVWTEKCIAVLINLATSQAGREEMVSAPGLISALASILDIGELI-VQEQAASCLLIL 454
GD +E+ +A+L N+ + GR+ + L +L+ + I QE+A L+++
Sbjct: 294 -GDMEVSERILAILTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLM 352
Query: 455 CNRSEKCCEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFR 497
++ +++ G+ +L+ +++ G+P +++A ++L R
Sbjct: 353 AHKGYGDRNAMIEAGIESSLLELTLVGSPLAQKRASRVLECLR 395
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 132/255 (51%), Gaps = 13/255 (5%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAG-VLPVL 308
RI + G ++ L+ + S+ +L QE G A+ NL++ + NKEM++S+G V P++
Sbjct: 96 RIKLAKAGAIKPLVSLISSS----DLQLQEYGVTAVLNLSLCDE-NKEMIVSSGAVKPLV 150
Query: 309 EEM-ISNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
+ + ++ +A L LS +EE K IG S A+ L L + + + K+D+ AL
Sbjct: 151 NALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLE-NGGFRAKKDASTAL 209
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVD-QGDCVWTEKCIAVLINLATSQAGREEMVSAP 426
Y+L + + N + SGI+ L L++D + D V A ++NL S + V
Sbjct: 210 YSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKS---AFVMNLLMSAPESKPAVVEE 266
Query: 427 GLISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRG- 485
G + L I++ G +E + S LL LC S MV +EG +P LV++S RG
Sbjct: 267 GGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQGSASRGA 326
Query: 486 REKAQKLLMLFREQR 500
+ KA+ L+ L R+ R
Sbjct: 327 KVKAEALIELLRQPR 341
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P++ CPISL LM DPVII++GQTY+R I +W +GH TCPKT Q L + PN +K
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 131 GLVASWCEQNGVP----IPEGPPESL 152
L+ WC +G+ + P ES
Sbjct: 366 NLIVQWCTASGISYESEFTDSPNESF 391
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 24/261 (9%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R ++ G + L + L S N +AQE A+ NL++ NK ++ G LE
Sbjct: 441 RAYIAEAGAIPHLCRLLTSE----NAIAQENSVTAMLNLSIYEK-NKSRIMEEG--DCLE 493
Query: 310 EMIS------NTSSYGSATALYLNLSCLEEAKPMIG-TSQAVQFLTQLHQSDSHIQCKQD 362
++S + +A A +LS + E K I Q V+ L L Q+ + + K+D
Sbjct: 494 SIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTP-RGKKD 552
Query: 363 SLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLI--NLATSQAGRE 420
++ ALYNLST N ++ G ++ L L ++G +A+L+ +L G+E
Sbjct: 553 AVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKE 612
Query: 421 EMVSAPGLISALASILDIGELIVQEQAASCLLILCNR-SEKCCEMVLQEGVIPALV-SIS 478
+ ++ L ++ G +E A + LL LC E VL+ I L+ ++
Sbjct: 613 DSA-----VAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLL 667
Query: 479 VNGTPRGREKAQKLLMLFREQ 499
GT R R KA L +F+ +
Sbjct: 668 FTGTKRARRKAASLARVFQRR 688
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 12/216 (5%)
Query: 290 VNNNGNKEMMLSAGVL-PVLEEMISNTSS---YGSATALYLNLSCLEEAKPMIGTSQAVQ 345
V + NK ++ AG L P++ + SN+ + Y SA+ L L+ S KP+IG + V
Sbjct: 134 VKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASA--NNKPIIGANGVVP 191
Query: 346 FLTQLHQSDSHIQCKQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKC 405
L ++ + S Q K D++ AL NLST+ N+ +L++ ++ + +LL T +
Sbjct: 192 LLVKVIKHGSP-QAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEK 250
Query: 406 IAVLIN--LATSQAGREEMVSAPGLISALASILDIGELIVQEQAASCLLILC--NRSEKC 461
LI + + + R +VS G + A+ +L+ G L +E A LL LC +RS K
Sbjct: 251 CCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRS-KY 309
Query: 462 CEMVLQEGVIPALVSISVNGTPRGREKAQKLLMLFR 497
E +L+EGVIP L+ ++V GT + R KAQ+LL L R
Sbjct: 310 REPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLR 345
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 54/74 (72%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
PE+ +C +S +MYDPVII+SG T+ER+ I+KWF +G+++CP +++KL L PN +K
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 131 GLVASWCEQNGVPI 144
++ WC +NG+ +
Sbjct: 280 SQISEWCAKNGLDV 293
>AT5G14510.1 | Symbols: | ARM repeat superfamily protein |
chr5:4678125-4679194 REVERSE LENGTH=327
Length = 327
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 14/248 (5%)
Query: 258 FVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLEEMISNTSS 317
+ LL LQS + + E+ AL +LA + NK ++ +G +P L E++ + +
Sbjct: 40 IISPLLSMLQSQ----DCITTEVALSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETK 95
Query: 318 YGS---ATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDS-HIQCKQDSLHALYNLSTV 373
A A L LS + K + +++ VQ L L D IQ K D + L NLST+
Sbjct: 96 MVVLELAMAFLLILSSCNKNKVKMASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTL 155
Query: 374 STNIPYLLSSGIINGLQSLL--VDQGDCVWTEKCIAVLINLATSQAGREEMVSAPGLISA 431
+P +++SG L ++ D+ +K +A+L N+ + E + S G I
Sbjct: 156 HQIVPLVIASGAPYALLQVINFCDKSS-ELADKAVALLENIISHSP--ESVSSIGGAIGV 212
Query: 432 LASILDIGELIVQEQAASCLLILCNRSEKCCE-MVLQEGVIPALVSISVNGTPRGREKAQ 490
L ++ G +E A LL +CN + M+L+EGV+P L+ +SV+GT R +E A+
Sbjct: 213 LVEAIEEGSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMAR 272
Query: 491 KLLMLFRE 498
+LL+L R+
Sbjct: 273 ELLLLLRD 280
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P RCPISL LM DPV I++GQTY+R I+ W + G+ TCP T+ L L PN+ ++
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 131 GLVASWC---EQNGV---PIPEGPPESLDLN 155
L+ WC NGV P P+ P + + +
Sbjct: 75 RLIQEWCVANRSNGVERIPTPKQPADPISVR 105
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 138/260 (53%), Gaps = 12/260 (4%)
Query: 250 RIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLE 309
R+ +G +G ++AL+ L+ + QE AL NL++++ NK ++ + G + L
Sbjct: 218 RVLIGESGAIQALIPLLRC----NDPWTQEHAVTALLNLSLHDQ-NKAVIAAGGAIKSLV 272
Query: 310 EMI--SNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHAL 367
++ +S +A L+L+ LEE K IG A+ L L + S + K+D+L L
Sbjct: 273 WVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGS-CRGKKDALTTL 331
Query: 368 YNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPG 427
Y L T+ N +++G + L L+ ++G + EK + VL +LA G+E +V G
Sbjct: 332 YKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGM-AEKAMVVLSSLAAIDDGKEAIVEEGG 390
Query: 428 LISALASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNG--TPRG 485
I+AL ++ G + +E A LL LC+ S + ++++EG IP LV +S +G + R
Sbjct: 391 -IAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSGSVSVRA 449
Query: 486 REKAQKLLMLFREQRQRDHS 505
+ KA++LL RE R+ S
Sbjct: 450 KRKAERLLGYLREPRKEASS 469
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-TCPKTQQKLQHLCLTPNYCV 129
P RCPISL+LM DPV + +GQTY+R IE W S G+N TCP T+ L L PN+ +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 130 KGLVASWC---EQNGV---PIPEGPPE 150
+ L+ WC NGV P P+ P +
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPAD 101
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 65 GQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLT 124
++ PPE +CPIS+ LM DPVII++G TY+RV IE W + G+ TCP T L
Sbjct: 27 SEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 125 PNYCVKGLVASWCEQNGVPIPEGPP 149
PN+ ++ ++ WC + G P+ + P
Sbjct: 86 PNHTIRKMIQGWCVEKGSPLIQRIP 110
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 11/265 (4%)
Query: 249 ARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVL 308
AR + G + L+ L S+ N+ A+ +AL NLAV N NK ++ AG +P L
Sbjct: 82 ARSKLADAGVIPPLVPMLFSS----NVDARHASLLALLNLAVRNERNKIEIVKAGAVPPL 137
Query: 309 EEMIS--NTSSYGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHA 366
+++ N S ATA L LS K MI +S L Q+ S + +Q K D++ A
Sbjct: 138 IQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGT-VQGKVDAVTA 196
Query: 367 LYNLSTVSTNIPYLLSSGIINGLQSLLVD-QGDCVWTEKCIAVL-INLATSQAGREEMVS 424
L+NLS +L + + L LL + + + EK A++ + L+ S+ GR + S
Sbjct: 197 LHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITS 256
Query: 425 APGLISALASILDIGELIVQEQAASCLLILCNRS-EKCCEMVLQEGVIPALVSISVNGTP 483
I L ++ G + E A LL LC +K +++L+EG IP L+S +V+GT
Sbjct: 257 CEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTS 316
Query: 484 RGREKAQKLLMLFREQ-RQRDHSPV 507
+ R++A+ LL L RE R+++ +P+
Sbjct: 317 KSRDRARVLLDLLRETPREKEMTPL 341
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P + +CPIS +LM DPVIIASG TY+R IEKWF G+ TCP T L L PN+ ++
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 131 GLVASWCEQN------GVPIPEGPPES 151
++ WC + +P P P S
Sbjct: 94 RMIQGWCGSSLGGGIERIPTPRVPVTS 120
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNTCPKTQQKLQHLCLTPNYCV 129
P CPISL +M DPVI+++G TY+R IEKW FS N+CP T+Q + LTPN+ +
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 130 KGLVASWCEQNG------VPIPEGP 148
+ L+ SWC N +P P+ P
Sbjct: 68 RRLIQSWCTLNASYGIERIPTPKPP 92
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-TCPKTQQKLQHLCLTPNYCV 129
P+E +C +S +M DPVII SGQTYE+ I +W H+ TCP +Q L +CLTPN+ +
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL--NHDLTCPTAKQVLYRVCLTPNHLI 132
Query: 130 KGLVASWCEQNGVPIPEGPPESLD 153
L+ WC N P P +D
Sbjct: 133 NELITRWCLANKYDRPAPKPSDID 156
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 28 VQGSIEDGVPGGHGQAFDRQFSKLSSFNFKADNNRESGQMPFP--PEELRCPISLQLMYD 85
+ +++DGV GG F ++ K D ++ P P CPISL+ M D
Sbjct: 19 LHSAVKDGVLGGGDGKF---LVVVTDEKKKLDLKEMISELELPEIPSVFICPISLEPMQD 75
Query: 86 PVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLVASWCEQNGV 142
PV + +GQTYER I KWF+ GH TCP T Q+L +TPN + L+ +W Q V
Sbjct: 76 PVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLIYTWFSQKYV 132
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Query: 66 QMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNTCPKTQQKLQHLCLT 124
++ PP L CPISL++M DPVI+++G TY+R IEKW F+ N+CP T+Q + LT
Sbjct: 9 EIEIPPFFL-CPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 125 PNYCVKGLVASWCEQNG------VPIPEGP 148
PN+ ++ L+ SWC N +P P P
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPP 97
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P CPISL+ M DPV + +GQTYER+ I KWF+ GH TCP T Q+L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 131 GLVASWCEQNGV 142
L+ +W Q V
Sbjct: 125 HLIYTWFSQKYV 136
>AT2G27430.1 | Symbols: | ARM repeat superfamily protein |
chr2:11729914-11733170 REVERSE LENGTH=438
Length = 438
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 26/328 (7%)
Query: 203 EIVSAQEEDTEQQYFSFLKVLTRGN--NWKRKCXXXXXXXXXXXXXXXARIFMGANGFVE 260
EIVS ED E + K + + + +W+ K R M G ++
Sbjct: 64 EIVSKPPED-ENEEVVLQKTVKKIHFGSWEEKEKAAIEIEKLAREDKKTRKLMAELGVIQ 122
Query: 261 ALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGV---LPVLEEMISNTSS 317
L+ + S V G+ Q+ AL L+ NK +M++A + LP E++ ++
Sbjct: 123 ILVSMVASDVS-GH---QKAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVLDQSTR 178
Query: 318 YGSATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDS-HIQCKQDSLHALYNLSTVSTN 376
+ A L S P + +SQ + FL SDS ++ K+ L + NL V N
Sbjct: 179 HAFAELLLSLSSLTNTQLP-VASSQILPFLMDTMNSDSTDMKTKEICLATISNLCLVLEN 237
Query: 377 IPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEM----VSAPGLISAL 432
L+ +G + L SL+ + +EK +A L L +Q G++ M + + GLI L
Sbjct: 238 AGPLVLNGAVETLLSLMSTKD---LSEKALASLGKLVVTQMGKKAMEDCLLVSKGLIEIL 294
Query: 433 ASILDIGELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGREKAQKL 492
+ DI + QE AA L++L ++S E + + G++P L+ +S+ G+P +++A KL
Sbjct: 295 -TWEDIPK--CQEYAAYILMVLAHQSWSQREKMAKAGIVPVLLEVSLLGSPLVQKRAVKL 351
Query: 493 LMLFREQRQRDHSPVETHQSPPETGDLS 520
L F+++R P S P+TG +S
Sbjct: 352 LQWFKDERNVRMGP----HSGPQTGWVS 375
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 11/245 (4%)
Query: 259 VEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLEEMISNTSSY 318
+ +L FL+S + + Q A ++ NL++ NK ++ +G +P+L +++ + ++
Sbjct: 274 TDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQ-NKVKIVRSGFVPLLIDVLKSGTTE 332
Query: 319 GS---ATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHALYNLSTVST 375
A AL+ +L+ +E K +IG AV+ L +S + +QD+ ALY+LS + +
Sbjct: 333 AQEHVAGALF-SLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPS 391
Query: 376 NIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPGLISALASI 435
N L+ +G + L S +V GD T + + VL NLA G+ M+ + + +
Sbjct: 392 NRTRLVRAGAVPTLLS-MVRSGDS--TSRILLVLCNLAACPDGKGAMLDGNAVAILVGKL 448
Query: 436 LDIG---ELIVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPRGREKAQKL 492
++G +E + LL LC + + + + G L+ + NG R +EKA K+
Sbjct: 449 REVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKI 508
Query: 493 LMLFR 497
L+ R
Sbjct: 509 LLAMR 513
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGH--NTCPKTQQKLQHLCLTPNYC 128
P E CPI+ LM DPV+++SGQT+ER+ ++ + G+ + T+ L + PN
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS--TVIPNLA 89
Query: 129 VKGLVASWCEQNGVPIPEGPPES 151
+K + SWC++ V P PP++
Sbjct: 90 MKSTIFSWCDRQKVDHPR-PPDA 111
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKG 131
E+L CPISL++M DPV+I +G TY+R I KWF G+ TCP T + L L N V+
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQ 349
Query: 132 LVASWCEQNGVPI 144
++ C+ NG+ +
Sbjct: 350 VIRKHCKTNGIVL 362
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 74 LRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLV 133
+CPISL +M PV +++G TY+RV I++W DG+NTCP T Q LQ+ PN + L+
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 134 ASWCEQNGVPIPEGPPES 151
W + PES
Sbjct: 75 DHWSDSINRRADSESPES 92
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P+E C +S +M +PVIIASGQTYE+ I +W TCPKT+Q L H PN+ +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLIS 131
Query: 131 GLVASWCEQN 140
L+ WC N
Sbjct: 132 DLITQWCLVN 141
>AT1G15165.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:5217719-5220067 REVERSE LENGTH=329
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Query: 61 NRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDG 107
++SGQ+ PPEE ISLQLM DPVI+ASGQTYERVC+EKWF DG
Sbjct: 242 KKKSGQIFIPPEE---QISLQLMRDPVIVASGQTYERVCVEKWFCDG 285
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 34 DGVPGGHGQAFDRQFSKLSSFNFKADNNRESGQMPFP-PEELRCPISLQLMYDPVIIASG 92
DG H + D L+ N ES P P+E C +S ++M +P++IASG
Sbjct: 29 DGGGKDHCE-IDEAIRILTCLRKIESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASG 87
Query: 93 QTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESL 152
QT+E+ I +W TCP+T+Q L H + PN+ + ++ WC + P+ E +
Sbjct: 88 QTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPKTSDEVI 146
Query: 153 DL 154
DL
Sbjct: 147 DL 148
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHL-CLTPNYCV 129
P + RCPISL++M DPVI+ SG T++RV I++W G+ TCP T+ L L PN+ +
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 130 KGLVASW 136
+ L+ ++
Sbjct: 66 RSLILNF 72
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P RCPISL +M PV + +G TY+R I++W G+NTCP T Q LQ+ PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 131 GLVASWCE 138
L+ W +
Sbjct: 71 RLIEIWSD 78
>AT1G08315.1 | Symbols: | ARM repeat superfamily protein |
chr1:2620500-2621477 REVERSE LENGTH=325
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 27/268 (10%)
Query: 249 ARIFMGANGFVEALLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVL 308
+R+ + G + L + L S+ H +QE A L NL++ + + +M S G+L L
Sbjct: 41 SRLIIADAGAIPYLAETLYSSSHS----SQENAAATLLNLSITSR--EPLMSSRGLLDAL 94
Query: 309 EEMI-------SNTSSYGSATALYLNLSCLEEAKPMIGTSQAVQF--LTQLHQSDSHIQC 359
+ S + SA +Y L E +P+IG+ + + F + + DSH +
Sbjct: 95 SHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRS 154
Query: 360 KQDSLHALYNLSTVSTNIPYLLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGR 419
+DSL AL+ ++ N ++S G I L SL+V C E AV+ +A +
Sbjct: 155 IKDSLKALFAIALYPMNRSTMISLGAIPALFSLIVKDSRCGIVEDATAVMAQVAGCEDSE 214
Query: 420 EEMVSAPGLISALASILDI---GELIVQEQAASCLLILCN--------RSEKCCEMVLQE 468
+ M G + LA +LD L ++E + LL L E
Sbjct: 215 DGMRRVSG-ANVLADLLDPCTGSSLRIKENSVGALLNLARCGGAAARSEVAAAVASGADE 273
Query: 469 GVIPALVSISVNGTPRGREKAQKLLMLF 496
G + +V ++ NG+ +GR+KA LL L
Sbjct: 274 GAMEGIVYVAENGSLKGRKKAVDLLKLV 301
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P +CPISL +M PV + +G TY+R I++W G+NTCP T Q L+ PN ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 131 GLVASWCEQNG 141
L+ W + G
Sbjct: 73 RLINIWSDSIG 83
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVKG 131
E+ +CPIS+++M DP + A G TYE KW G T PKT + L++ L PN+ ++
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 132 LVASWCEQN 140
++ W E+N
Sbjct: 295 IIKDWLEKN 303
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 57 KADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQ 116
++D +RE+ P+ CPISL++M DP + A G TYE I W GH T P T
Sbjct: 318 RSDEHREA------PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNT 371
Query: 117 KLQHLCLTPNYCVKGLVASW 136
KL H L PN ++ + W
Sbjct: 372 KLHHTKLVPNLALRSAIQEW 391
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 42 QAFDRQFSKLSSFNFKADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIE 101
Q++ R+ S F+ + R+ PP CPIS ++M +P + A G TYE +
Sbjct: 475 QSYTRRHGTPSGFSDEDSVTRQ------PPSYFICPISQEVMREPRVAADGFTYEAESLR 528
Query: 102 KWFSDGHNTCPKTQQKLQHLCLTPNYCVKGLVASWCEQNG 141
+W +GH T P T KL H L PN+ ++ + W ++N
Sbjct: 529 EWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS 568
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCV 129
PP CPI+ ++M DP A G TYE I KW S GH T P T +L HL L PN +
Sbjct: 418 PPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRAL 477
Query: 130 KGLV 133
+ +
Sbjct: 478 RSAI 481
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 60 NNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQ 119
N+RE PP+ CPI+ +M DP + A G TYE I +WF GH T P ++L
Sbjct: 349 NHRE------PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLP 402
Query: 120 HLCLTPNYCVKGLVASW 136
H L PN ++ + W
Sbjct: 403 HTSLVPNLALRSAIQEW 419
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHL----CLTP 125
PP E CPIS +M DPV+++SGQT+ERVC++ N PK + L + P
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ--VCRDLNFIPKLNDDEESLPDFSNIIP 90
Query: 126 NYCVKGLVASWCEQNGVPIPEGP 148
N +K + +WC+ GV P+ P
Sbjct: 91 NLNMKSTIDTWCDTVGVSRPQPP 113
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 27/259 (10%)
Query: 262 LLQFLQSAVHEGNLMAQEIGAMALFNLAVNNNGNKEMMLSAGVLPVLEEMISNTSSYGS- 320
+L L++ + + Q +L NL+++ NK ++ G +P+L +++ + S
Sbjct: 267 ILSLLKNMIVSRYSLVQTNALASLVNLSLDKK-NKLTIVRLGFVPILIDVLKSGSREAQE 325
Query: 321 -ATALYLNLSCLEEAKPMIGTSQAVQFLTQLHQSDSHIQCKQDSLHALYNLSTVSTNIPY 379
A +LS ++ K IG A+Q L ++ + + DS ALY+L+ TN
Sbjct: 326 HAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSK 385
Query: 380 LLSSGIINGLQSLLVDQGDCVWTEKCIAVLINLATSQAGREEMVSAPGLISALASILDIG 439
L+ G + L S+ V G+ + + V+ NLA GR M+ A + +IL +G
Sbjct: 386 LVRLGAVPALFSM-VRSGESA--SRALLVICNLACCSEGRSAMLDANAV-----AIL-VG 436
Query: 440 EL---------------IVQEQAASCLLILCNRSEKCCEMVLQEGVIPALVSISVNGTPR 484
+L +E + L L + S + + + + L + GT R
Sbjct: 437 KLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTER 496
Query: 485 GREKAQKLLMLFREQRQRD 503
REKA+K+L L RE+ D
Sbjct: 497 AREKAKKILQLMRERVPED 515
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCV 129
PP CPI ++M DP+I A G TYE I +W ++GH+T P T K++ L PN+ +
Sbjct: 735 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHAL 794
Query: 130 KGLVASWCEQ 139
+ W Q
Sbjct: 795 HLAIQDWQNQ 804
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCV 129
PP CPI ++M DP+I A G TYE I +W ++GH+T P T K++ L PN+ +
Sbjct: 725 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHAL 784
Query: 130 KGLVASWCEQ 139
+ W Q
Sbjct: 785 HLAIQDWQNQ 794
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 47 QFSKLSSFNFKADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSD 106
+F + ++N + G P CPI ++M +P + A G +YE I++W S
Sbjct: 692 EFKTKGGYEEATNSNMDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSM 751
Query: 107 GHNTCPKTQQKLQHLCLTPNYCVKGLVASW 136
GH+T P T +L + LTPN+ ++ L+ W
Sbjct: 752 GHDTSPMTNLRLDYQMLTPNHTLRSLIQDW 781
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P CPI ++M +P I A G TYER I W + HN P T+QKL H LTPN+ ++
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNISPVTRQKLDHFKLTPNHTLR 784
Query: 131 GLVASW 136
+ W
Sbjct: 785 SAIRDW 790
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQ-HLCLTPNYCV 129
P CPISL++M DPV SG TY+R I KW + +CP T+Q L LTPN+ +
Sbjct: 25 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL-EKVPSCPVTKQPLPLDSDLTPNHML 83
Query: 130 KGLVASWCEQN------GVPIPEGPPESLDL 154
+ L+ WC +N + P PP L++
Sbjct: 84 RRLIQHWCVENETRGVVRISTPRVPPGKLNV 114
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P CPI ++M DP I A G TYER I++W + P T+ +L+H LTPN+ ++
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 131 GLVASW 136
+ W
Sbjct: 769 SAIREW 774
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCV 129
PP CP+ +M +P I A G TY+R IE+W + H T P T LQ++ L PN+ +
Sbjct: 749 PPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTL 807
Query: 130 KGLVASWCEQN 140
+ W +N
Sbjct: 808 YAAIVEWRNRN 818
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 52 SSFNFKADNNRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTC 111
SSF+ + +R P CPI ++M DP + A G TYE I W H+T
Sbjct: 751 SSFHLGRNEHR------IAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTS 804
Query: 112 PKTQQKLQHLCLTPNYCVKGLVASWCEQN 140
P T KL H L N+ ++ + W + +
Sbjct: 805 PMTNVKLSHTSLIANHALRSAIQEWLQHH 833
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIE--KWFSDGHNTCPKTQQKLQHLCLTPNYC 128
P E CPI+ LM DPV++ASGQT+ER+ ++ + S TQ L + PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLS--TVIPNLA 68
Query: 129 VKGLVASWCEQNGVPIPEGP 148
+K + SWC++N + P P
Sbjct: 69 MKSTILSWCDRNKMEHPRPP 88
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P E CPIS LM DP+I++SG +YER C+ + G P + PN +K
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFS----TVIPNLALK 114
Query: 131 GLVASWCEQNGVPIPE 146
+ SWCE+ P P+
Sbjct: 115 SAIHSWCERRCFPPPK 130
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQKLQHLCLTPN 126
E CP++ Q+M++PV + +GQT+ER IEKWF + +CP T ++L L+P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 127 YCVKGLVASWCEQN 140
++ + W +N
Sbjct: 87 IALRNTIEEWRARN 100
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQKLQHLCLTPN 126
E CP++ Q+M++PV + +GQT+ER IEKWF + +CP T ++L L+P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 127 YCVKGLVASWCEQN 140
++ + W +N
Sbjct: 87 IALRNTIEEWRARN 100
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 NRESGQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQH 120
N SG PP CP+ +M +P + A G TY+R IE+W + HNT P T L
Sbjct: 757 NSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHS 815
Query: 121 LCLTPNYCVKGLVASW 136
L PNY + + W
Sbjct: 816 KNLLPNYTLYTAIMEW 831
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 72 EELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-----TCPKTQQKLQHLCLTPN 126
E CP++ ++M+DPV + +G+T+ER IEKWF + + +CP T Q+L ++ +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 127 YCVKGLVASWCEQN 140
++ + W +N
Sbjct: 85 IALRNTIEEWRSRN 98
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 70 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCV 129
PP+ CPIS +M +P + A G TYE +W + G P T +L++ L PN +
Sbjct: 294 PPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVL 353
Query: 130 KGLVASWCEQN 140
+ + W +Q+
Sbjct: 354 RSAIKDWLQQH 364
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 22/87 (25%)
Query: 71 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQKLQHLCLTPNYCVK 130
P + +CPIS +LM DP WF G+ TCP T L L PN+ ++
Sbjct: 34 PSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQIPNHTIR 77
Query: 131 GLVASWCEQN------GVPIPEGPPES 151
++ WC + +P P P S
Sbjct: 78 RMIQGWCGSSLGGGIERIPTPRVPVTS 104