Miyakogusa Predicted Gene

Lj4g3v2928720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2928720.1 Non Chatacterized Hit- tr|D7TW20|D7TW20_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.21,3e-19,seg,NULL; coiled-coil,NULL; FAMILY NOT NAMED,NULL;
Remorin_C,Remorin, C-terminal,CUFF.51869.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23750.2 | Symbols:  | Remorin family protein | chr5:8010004-...   125   1e-29
AT5G23750.1 | Symbols:  | Remorin family protein | chr5:8010004-...   125   1e-29
AT3G48940.1 | Symbols:  | Remorin family protein | chr3:18142863...   119   2e-27
AT3G61260.1 | Symbols:  | Remorin family protein | chr3:22675403...   109   1e-24
AT2G45820.1 | Symbols:  | Remorin family protein | chr2:18863147...    96   2e-20
AT1G63295.1 | Symbols:  | Remorin family protein | chr1:23474129...    77   9e-15
AT2G41870.1 | Symbols:  | Remorin family protein | chr2:17471119...    55   2e-08
AT4G00670.1 | Symbols:  | Remorin family protein | chr4:278434-2...    52   3e-07
AT3G57540.1 | Symbols:  | Remorin family protein | chr3:21301623...    51   5e-07

>AT5G23750.2 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=201
          Length = 201

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 87/102 (85%)

Query: 79  SIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKI 138
           S++RDAVLARVE++KR++LIKAWEE EK KV+NKA K   ++  WE  KKA+ +A++KK+
Sbjct: 77  SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKM 136

Query: 139 EENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           EE +++KKA+YVE M+NKIA+ H+ A+EK+A+IEA++GEE+L
Sbjct: 137 EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEIL 178


>AT5G23750.1 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=202
          Length = 202

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 87/102 (85%)

Query: 79  SIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKI 138
           S++RDAVLARVE++KR++LIKAWEE EK KV+NKA K   ++  WE  KKA+ +A++KK+
Sbjct: 78  SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKM 137

Query: 139 EENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           EE +++KKA+YVE M+NKIA+ H+ A+EK+A+IEA++GEE+L
Sbjct: 138 EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEIL 179


>AT3G48940.1 | Symbols:  | Remorin family protein |
           chr3:18142863-18144163 REVERSE LENGTH=175
          Length = 175

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 82/102 (80%)

Query: 79  SIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKI 138
           S+ RDAVL R+E  KR++LIKAWEE EK+KV+NKA K   +V  WE +KKAS +A++KKI
Sbjct: 51  SVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKI 110

Query: 139 EENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           EE +++KKA Y E M+NKIA+ H+ A+EK+A+ EA++GE+VL
Sbjct: 111 EEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVL 152


>AT3G61260.1 | Symbols:  | Remorin family protein |
           chr3:22675403-22676701 REVERSE LENGTH=212
          Length = 212

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 87/117 (74%), Gaps = 2/117 (1%)

Query: 64  PLDQDLDAETDNINTSIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMW 123
           P+++   A+    + S+DRD  LA +  +KRL+ ++AWEE+EK+K +NKA K    V  W
Sbjct: 75  PVEEPAPAKP--ASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAW 132

Query: 124 EKTKKASTQAKIKKIEENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           E +KKA+ +A++KKIEE +++KKA+Y E M+NK+A  H+ A+E++A+IEA++GE+VL
Sbjct: 133 ENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVL 189


>AT2G45820.1 | Symbols:  | Remorin family protein |
           chr2:18863147-18864576 REVERSE LENGTH=190
          Length = 190

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 81/104 (77%)

Query: 77  NTSIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIK 136
           + S DRD +LA +E +K+ + IKAWEE+EK+K +N+A K    V  WE +KKA+ +A+++
Sbjct: 64  SGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123

Query: 137 KIEENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           KIEE +++KKA Y E M+NK+A  H+LA+EK+A++EA+KGEE+L
Sbjct: 124 KIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELL 167


>AT1G63295.1 | Symbols:  | Remorin family protein |
           chr1:23474129-23475300 REVERSE LENGTH=151
          Length = 151

 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 61/95 (64%)

Query: 86  LARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRK 145
           L  +E +KRLALI AWEENEK K   KAYK  C+++ WE   K + +  +KK+EEN+  +
Sbjct: 31  LVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKMEENLQVE 90

Query: 146 KADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           K ++ +  + KI E  ++A+ K+  IE QK +E +
Sbjct: 91  KTEFSKKFKKKIPEIEKIAEAKREKIEKQKEQESI 125


>AT2G41870.1 | Symbols:  | Remorin family protein |
           chr2:17471119-17472519 REVERSE LENGTH=274
          Length = 274

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 30  RLSEVLKLKESQNAESSNSTLTITRQGSTTNPSYPLDQDLDAETDNINTSIDRDAVLARV 89
           R  E++++ E  + E   + L I          YP    LD  +DN        + + RV
Sbjct: 106 RQDELMRIHEDTDHEEETNPLAIVPD------QYP-GSGLDPGSDNGPGQSRVGSTVQRV 158

Query: 90  ESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMW--EKTKKASTQAKIKKIEENMDRKKA 147
           + ++  A I AW+  +  K++N+  +    ++ W  E+  KA++   +KKIE  ++ +KA
Sbjct: 159 KREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSW--MKKIERKLEERKA 216

Query: 148 DYVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
             +E  QN +A+  R A+E++A  EA++G EV
Sbjct: 217 KAMEKTQNNVAKAQRKAEERRATAEAKRGTEV 248


>AT4G00670.1 | Symbols:  | Remorin family protein |
           chr4:278434-279170 REVERSE LENGTH=123
          Length = 123

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query: 97  LIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKADYVEIMQNK 156
           +IKAW+E + TKV+NK  K    +  WEK K    ++++ +I+  MD KK +  E ++N+
Sbjct: 16  VIKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQRKMDSKKMEKSEKLRNE 75

Query: 157 IAETHRLADEKKALIEAQKGEEVL 180
            A  H  A +KKA ++ ++ +E+L
Sbjct: 76  KAAVHAKAQKKKADVQTRRAQEIL 99


>AT3G57540.1 | Symbols:  | Remorin family protein |
           chr3:21301623-21302924 REVERSE LENGTH=296
          Length = 296

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 55/96 (57%)

Query: 84  AVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMD 143
           A + RV+ ++  A I AW+  +  K++N+  +    ++ W   +     + +KKIE  ++
Sbjct: 175 ASVQRVKREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLE 234

Query: 144 RKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
            ++A  +E  QNK+A+  R A+E++A  E ++G EV
Sbjct: 235 DRRAKAMEKTQNKVAKAQRKAEERRATAEGKRGTEV 270