Miyakogusa Predicted Gene
- Lj4g3v2917670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2917670.1 Non Chatacterized Hit- tr|I1KP78|I1KP78_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19091
PE,73.39,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; helicase superfamily
,NODE_71893_length_2135_cov_11.382669.path2.1
(635 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 738 0.0
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 731 0.0
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 569 e-162
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 566 e-161
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 541 e-154
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 194 2e-49
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 191 1e-48
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 5e-46
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 174 2e-43
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 2e-43
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 2e-43
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 2e-43
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 174 2e-43
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 171 2e-42
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 171 2e-42
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 169 4e-42
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 163 3e-40
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 161 1e-39
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 160 4e-39
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 160 4e-39
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 155 7e-38
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 155 8e-38
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 155 1e-37
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 154 2e-37
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 154 2e-37
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 153 3e-37
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 153 3e-37
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 152 7e-37
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 152 7e-37
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 151 1e-36
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 150 3e-36
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 4e-36
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 4e-36
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 5e-36
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 5e-36
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 5e-36
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 147 3e-35
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 147 3e-35
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 145 8e-35
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 143 4e-34
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 142 7e-34
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 139 5e-33
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 138 1e-32
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 137 3e-32
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 3e-32
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 134 2e-31
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 134 3e-31
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 133 4e-31
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 130 4e-30
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 130 4e-30
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 127 2e-29
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 127 3e-29
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 127 3e-29
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 127 3e-29
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 125 7e-29
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 125 7e-29
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 124 2e-28
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 3e-28
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 123 4e-28
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 122 7e-28
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 122 9e-28
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 121 1e-27
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 121 1e-27
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 120 2e-27
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 120 4e-27
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 120 4e-27
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 119 4e-27
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 117 2e-26
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 113 4e-25
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 111 1e-24
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 107 3e-23
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 104 2e-22
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 104 2e-22
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 99 9e-21
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 89 1e-17
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 81 2e-15
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 71 3e-12
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 55 1e-07
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/532 (66%), Positives = 431/532 (81%), Gaps = 4/532 (0%)
Query: 108 SIASLGKYDVKKERRVMPKSYDEGSDFSEQVELIKYEINKRKLSQN---EGQEQQDDILT 164
S ASLG +D+K +RV DE + ++ +++KRK N E QE D I +
Sbjct: 267 SSASLGNHDIKLTKRVNRNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYS 326
Query: 165 QKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPA 224
KRFDES ISPLT+KALS++G + MTRVQ+A+L CL G D LVKAKTGTGKS AFLLPA
Sbjct: 327 AKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPA 386
Query: 225 IETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
IETVLKAM++ +V+PI LILCPTRELASQIAAE K LLK H+GIGVQ+L+GG RF
Sbjct: 387 IETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRF 446
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIE 343
KLDQ+RL+S+PCQIL+ATPGRLLDH+ENKSG++ RLM L++ ++DEAD LLDLGFR+D+E
Sbjct: 447 KLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVE 506
Query: 344 KIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAP 403
KI+DCLPRQRQS+LFSATIPKEVRR+SQLVLKR+H YIDT+G+G VET +++QS ++AP
Sbjct: 507 KIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAP 566
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYR 463
HESHF +V H+LKEHI TPDYK+IVFC+ GMVTSLMY +LREMKL V+EIH+RKPQL+R
Sbjct: 567 HESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHR 626
Query: 464 TRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXX 523
TRVSDEFKES +LILV+SDVS+RGMNYPDVTLV+QVGIP DREQYIH
Sbjct: 627 TRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGE 686
Query: 524 XILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLGYY 583
+LLIAPWE YFLDE+KDLPL+ IP PD+D K +++ SM KID IKEAAYH WLGYY
Sbjct: 687 GLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYY 746
Query: 584 NSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR 635
NS+RE GR+KTT+A+LANRF SIGL++PPALFR+TA+KMGLK I GI IR+
Sbjct: 747 NSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/532 (66%), Positives = 432/532 (81%), Gaps = 4/532 (0%)
Query: 108 SIASLGKYDVKKERRVMPKSYDEGSDFSEQVELIKYEINKRKLSQN---EGQEQQDDILT 164
S ASLG +D+K +RV DE + ++ +++K++ N E QE D I +
Sbjct: 314 SSASLGNHDIKLTKRVNRNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYS 373
Query: 165 QKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPA 224
KRFDES ISPLT+KALS++G + MTRVQ+A+L CL G D LVKAKTGTGKS AFLLPA
Sbjct: 374 AKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPA 433
Query: 225 IETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
IETVLKAM++ +V+PI VLILCPTRELASQIAAE K LLK+H+GIGVQ+L+GG RF
Sbjct: 434 IETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRF 493
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIE 343
+LDQ+RL+S+PCQIL+ATPGRLLDH+ENKSG++ RLM L++ ++DEAD LLDLGF++D+E
Sbjct: 494 RLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVE 553
Query: 344 KIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAP 403
KI+DCLPRQRQS+LFSATIPKEVRR+SQLVLKR+H YIDT+G+G VET ++KQS ++AP
Sbjct: 554 KIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAP 613
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYR 463
HESHF +V H+LKEHI PDYK+IVFC+ GMVTSLMY +LREMKL V+EIH+RKPQL+R
Sbjct: 614 HESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHR 673
Query: 464 TRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXX 523
T VSDEFKES +LILV+SDVS+RGMNYPDVTLV+QVGIP DREQYIH
Sbjct: 674 TCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGK 733
Query: 524 XILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLGYY 583
+LLIAPWE YFLDE+KDLPL+ IP PD+D + K +++ SM KID IKEAAYH WLGYY
Sbjct: 734 GLLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYY 793
Query: 584 NSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR 635
NS+RE GR+KTT+A+LANRF SIGL++PPALFR+TA+KMGLK I GI IR+
Sbjct: 794 NSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 262/475 (55%), Positives = 357/475 (75%)
Query: 160 DDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAA 219
D L++ RFD+ +SPL++KA+ AG+ MT VQEA+LP+ LQG DVL KAKTGTGK+ A
Sbjct: 376 DSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVA 435
Query: 220 FLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 279
FLLPAIE V+K+ + R PI+VL++CPTRELASQ AAEA LLK+H IGVQ ++G
Sbjct: 436 FLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIG 495
Query: 280 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 339
G + +Q+R+ ++PCQILVATPGRL DH+EN SG + RLMG+++LVLDEADHLLD+GFR
Sbjct: 496 GTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFR 555
Query: 340 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 399
+DIE+I+ +P+QRQ+ LFSAT+P+EVR+I + LKR+H++I+ V GS ET ++ Q +
Sbjct: 556 RDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMY 615
Query: 400 LIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKP 459
+IA + HF ++H +LKEHI DYKVI+FCT MVT L+ +L ++ L V+EIHSRKP
Sbjct: 616 MIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKP 675
Query: 460 QLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXX 519
Q YRTRVSDEF++SK +ILV+SDVS+RG++YPDV+LV+Q+G+P DREQYIH
Sbjct: 676 QSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKG 735
Query: 520 XXXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGW 579
+LL+APWEEYF+ +KDLP+ K PLP IDP+A +++ + +++ KEAAY W
Sbjct: 736 KEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAW 795
Query: 580 LGYYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRIR 634
LGYY S + I R+ T + +LAN FS S+GL PPA+ + KMGLK++PG+R +
Sbjct: 796 LGYYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 850
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 566 bits (1458), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/485 (54%), Positives = 361/485 (74%)
Query: 150 LSQNEGQEQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVK 209
+ ++ + D LT+ RFD +SPL++KA+ AGY MT VQEA+LP+ L+G DVL K
Sbjct: 304 IEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAK 363
Query: 210 AKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHH 269
AKTGTGK+ AFLLP+IE V+K+ T+ + PIL L++CPTRELA+Q A EA LLK+H
Sbjct: 364 AKTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYH 423
Query: 270 EGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDE 329
IGVQ ++GG R L+QKR+ ++PCQILVATPGRL DH+EN G + RL G+++LVLDE
Sbjct: 424 PSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDE 483
Query: 330 ADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSV 389
ADHLLD+GFRKDIE+I+ +P++RQ+ LFSAT+P+EVR+I + L+R+H++++ V G++
Sbjct: 484 ADHLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTI 543
Query: 390 ETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKL 449
ET Q++Q +IA + HF +++ +L+EHI+ DYKVIVFCT MVT L+ +L E+ L
Sbjct: 544 ETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNL 603
Query: 450 KVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYI 509
V+EIHSRKPQ YRTRVS+EF++SK LILV+SDVS+RG++YPDVTLVLQVG+P DREQYI
Sbjct: 604 NVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYI 663
Query: 510 HXXXXXXXXXXXXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDD 569
H ILL+APWEEYFL +KDLP+ K PLP IDP+ K++ ++ ++
Sbjct: 664 HRLGRTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEM 723
Query: 570 DIKEAAYHGWLGYYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIP 629
KEAAY WLGYYNS + IGR+K + +LAN FS S+GL PPA+ + KMGLK++P
Sbjct: 724 RNKEAAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVP 783
Query: 630 GIRIR 634
G+R +
Sbjct: 784 GLRAK 788
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 349/474 (73%)
Query: 160 DDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAA 219
D L++ RFD+ +SPLT+K + AG+ MT VQEA+LP+ LQG D+L KAKTGTGK+ A
Sbjct: 74 DSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVA 133
Query: 220 FLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 279
FLLP+IE V+KA + R PI+VL++CPTRELA Q AAEA +LLK+H IGVQ ++G
Sbjct: 134 FLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIG 193
Query: 280 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 339
G + +Q+RL PCQILVATPGRL DH++N SG + RLMG+++LVLDEADHLLD+GFR
Sbjct: 194 GTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFR 253
Query: 340 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 399
++IE+I+ +P+QRQ+ LFSAT+ EVR+I + LKR+H++++ V G+ ET ++ Q +
Sbjct: 254 REIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMY 313
Query: 400 LIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKP 459
+IA + HF +++ +LK+HI YKVI+FCT MVT L+ +L ++ L V+EIHSRKP
Sbjct: 314 MIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKP 373
Query: 460 QLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXX 519
Q YRTRVSDEF++SK +ILV+SDVS+RG++YPDV+LV+Q+G+P DREQYIH
Sbjct: 374 QSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKG 433
Query: 520 XXXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGW 579
+LL+APWEEYFL +KDLP+ K LP ID +A K++ + +++ KEAAY W
Sbjct: 434 KEGEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAW 493
Query: 580 LGYYNSIREIGREKTTIADLANRFSESIGLQRPPALFRKTALKMGLKDIPGIRI 633
LGYY S ++I R+ T + +LAN FS S+GL PPA+ KMGLK++PGIR+
Sbjct: 494 LGYYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 236/437 (54%), Gaps = 33/437 (7%)
Query: 162 ILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFL 221
I+T FD +S T A+ G+ +MT++Q S+ L+G DVL A+TG+GK+ AFL
Sbjct: 85 IMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFL 144
Query: 222 LPAIETVLKAMSTNTSQRVSP---ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLV 278
+PA+E + K +R SP V+++CPTRELA Q A+ LLKHH V ++
Sbjct: 145 IPAVELLFK-------ERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQT-VSMVI 196
Query: 279 GGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGF 338
GG + + +R+ S +++ATPGRLLDH++N + L+ LV+DEAD +L+ F
Sbjct: 197 GGNNRRSEAQRIASG-SNLVIATPGRLLDHLQNTKAFIYK--HLKCLVIDEADRILEENF 253
Query: 339 RKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKRE-HQYIDTVGMGSVETPVQIKQ 397
+D+ KI+ LP+ RQ+ LFSAT +V+ ++++ L H +D G V T ++Q
Sbjct: 254 EEDMNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDD-GRRKV-TNEGLEQ 311
Query: 398 SFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSR 457
+ + P + ++ LK+++ + K++VF + ++++ + V +IH
Sbjct: 312 GYCVVPSKQRLILLISFLKKNL----NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGG 367
Query: 458 KPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDR-EQYIHXXXXXX 516
Q RT+ +F ++K+ IL+ +DV++RG++ P V ++Q PPD+ +YIH
Sbjct: 368 MDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYD-PPDKPTEYIHRVGRTA 426
Query: 517 XXXXXXXXILLIAPWEEYFLDEIKDLPLKKIPLPDIDPQAKL--KIEHSMEKID------ 568
LL+ EE L I+ L K+P+ +++ K ++ ++EK
Sbjct: 427 RGEGAKGKALLVLIPEE--LQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNL 484
Query: 569 DDIKEAAYHGWLGYYNS 585
+ + + AY +L YNS
Sbjct: 485 NKLAKDAYRAYLSAYNS 501
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 249/488 (51%), Gaps = 42/488 (8%)
Query: 162 ILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFL 221
I+T K F+ +S T K++ G+ MT++Q ++P + G DVL A+TG+GK+ AFL
Sbjct: 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFL 209
Query: 222 LPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 281
+PA+E + + T + VL++CPTRELA Q AK LLK+H V ++GG
Sbjct: 210 IPAVELLYRVKFTPRNG----TGVLVICPTRELAIQSYGVAKELLKYHSQT-VGKVIGGE 264
Query: 282 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 341
+ K + + L + +LVATPGRLLDH+EN +G + L+ LV+DEAD +L+ F +D
Sbjct: 265 KRKTEAEIL-AKGVNLLVATPGRLLDHLENTNGFIFK--NLKFLVMDEADRILEQNFEED 321
Query: 342 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVE-TPVQIKQSFL 400
++KI++ LP+ RQ+ LFSAT +V ++++ L YID V G E T ++Q +
Sbjct: 322 LKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSP-VYID-VDEGRKEVTNEGLEQGYC 379
Query: 401 IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
+ P + LK Q ++ F TC T ++ R +K EI Q
Sbjct: 380 VVPSAMRLLFLLTFLKR--FQGKKKIMVFFSTC-KSTKFHAELFRYIKFDCLEIRGGIDQ 436
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXX 520
RT +F +++ IL+ ++V++RG+++P V ++Q P + YIH
Sbjct: 437 NKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEG 496
Query: 521 XXXXILLI-APWEEYFLDEIKDLPLKKIPLPDIDPQAK--LKIEHSMEKIDDD---IKEA 574
LL+ P E F I+ L KIP+ + + + K L ++ +E + + +KE+
Sbjct: 497 AKGKALLVLTPQELKF---IQYLKAAKIPVEEHEFEEKKLLDVKPFVENLISENYALKES 553
Query: 575 AYHGWLGYYNSIREIGREKTTIADLAN-------RFSESIGLQRPPALFRKTALKMGLKD 627
A + Y + G + ++ D+ N + S G PP K ALK+ D
Sbjct: 554 AKEAYKTYIS-----GYDSHSMKDVFNVHQLNLTEVATSFGFSDPP----KVALKI---D 601
Query: 628 IPGIRIRR 635
G R +R
Sbjct: 602 RGGYRSKR 609
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 242/475 (50%), Gaps = 32/475 (6%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
++F + IS T + L A Y+ MT VQ A++P L G D+L A+TG+GK+ AF++P +
Sbjct: 71 RKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPIL 130
Query: 226 ETVLKAMSTNTSQRVSP---ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVR 282
E + + +R SP + +I+ PTRELA+Q + K H+ L+GG R
Sbjct: 131 EKLHR-------ERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHK-FSAGLLIGG-R 181
Query: 283 FKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDI 342
+D ++ ILV PGRLL H++ LQ+L+LDEAD +LD F+ +
Sbjct: 182 EGVDVEKERVHEMNILVCAPGRLLQHMDETPNFEC--PQLQILILDEADRVLDSAFKGQL 239
Query: 343 EKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIA 402
+ I+ LP+ RQ++LFSAT K+V+ +++L L R+ +YI TP + Q+ +I
Sbjct: 240 DPIISQLPKHRQTLLFSATQTKKVKDLARLSL-RDPEYISVHAEAVTATPTSLMQTVMIV 298
Query: 403 PHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMK--LKVKEIHSRKPQ 460
P E ++ +K H+ + +++VF + +++ +++ + +K +H + Q
Sbjct: 299 PVEKKLDMLWSFIKTHL----NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQ 354
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPD-VTLVLQVGIPPDREQYIHXXXXXXXXX 519
R V +F E +Q +L +DV +RG+++ V V+QV P D YIH
Sbjct: 355 EKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFY 413
Query: 520 XXXXXILLIAPWEEYFLDEIKD--LPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYH 577
+L + P EE ++++++ +P+K I + Q ++ ++ D++ A
Sbjct: 414 TQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQR 473
Query: 578 GWLGYYNSIREIGREKTTIADLAN----RFSESIGLQRPPALFRKTALKMGLKDI 628
++ Y SI + R I D++ FS S+GL P + R T LK K +
Sbjct: 474 AFITYLRSIHK--RRDKEIFDVSKLSIENFSASLGLPMTPRI-RFTNLKTKKKGV 525
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 209/408 (51%), Gaps = 33/408 (8%)
Query: 108 SIASLGKYDVKKERRVMPKSYDEGSDFSEQVELIKYEINKRKLSQNEGQEQQDDILTQKR 167
+ + LG P S G++ S + K+EI G + +++
Sbjct: 112 AASGLGNASSGGSSARGPPSSAAGNELSPEAYCRKHEITV------SGGQVPPPLMS--- 162
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ +G+ ++ + SAG+ + +Q S P+ +Q D++ AKTG+GK+ +L+P
Sbjct: 163 FEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGF-- 220
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
+ + R+ P +L+L PTRELA+QI EA K + I L GG
Sbjct: 221 -MHLQRIHNDSRMGPT-ILVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQL 277
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
K ++ I+VATPGRL D +E K + L + LVLDEAD +LD+GF I KIV+
Sbjct: 278 KEIERG-VDIVVATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVN 333
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV---QIKQSF-LIAP 403
+P +RQ+++++AT PKEVR+I+ +L Q V +G+V+ V I Q+ ++AP
Sbjct: 334 EVPTKRQTLMYTATWPKEVRKIAADLLVNPAQ----VNIGNVDELVANKSITQTIEVLAP 389
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E H ++ IL+ Q P K+I+FC+ M L + R IH K Q
Sbjct: 390 MEKHSRL-EQILRS---QEPGSKIIIFCSTKRMCDQLARNLTR--TFGAAAIHGDKSQAE 443
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ +V+ P E Y+H
Sbjct: 444 RDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 491
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 24/348 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ +G P ++ + SAG+ T +Q S P+ +QG D++ AKTG+GK+ +L+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF-- 217
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
L R+ P +L+L PTRELA+QI EA V I L GG K Q
Sbjct: 218 -LHLQRIRNDSRMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQ 273
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
R I+VATPGRL D +E + + L + LVLDEAD +LD+GF I KIV
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEPQIRKIVK 330
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAP 403
+P +RQ+++++AT PK VR+I+ +L Q V +G+V+ V K ++AP
Sbjct: 331 EIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAP 386
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E ++ IL+ Q P KVI+FC T M L + R+ IH K Q
Sbjct: 387 MEKQRRL-EQILRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPE 440
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 441 RDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 24/348 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ +G P ++ + SAG+ T +Q S P+ +QG D++ AKTG+GK+ +L+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF-- 217
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
L R+ P +L+L PTRELA+QI EA V I L GG K Q
Sbjct: 218 -LHLQRIRNDSRMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQ 273
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
R I+VATPGRL D +E + + L + LVLDEAD +LD+GF I KIV
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEPQIRKIVK 330
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAP 403
+P +RQ+++++AT PK VR+I+ +L Q V +G+V+ V K ++AP
Sbjct: 331 EIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAP 386
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E ++ IL+ Q P KVI+FC T M L + R+ IH K Q
Sbjct: 387 MEKQRRL-EQILRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPE 440
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 441 RDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 24/348 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ +G P ++ + SAG+ T +Q S P+ +QG D++ AKTG+GK+ +L+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF-- 217
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
L R+ P +L+L PTRELA+QI EA V I L GG K Q
Sbjct: 218 -LHLQRIRNDSRMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQ 273
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
R I+VATPGRL D +E + + L + LVLDEAD +LD+GF I KIV
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEPQIRKIVK 330
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAP 403
+P +RQ+++++AT PK VR+I+ +L Q V +G+V+ V K ++AP
Sbjct: 331 EIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAP 386
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E ++ IL+ Q P KVI+FC T M L + R+ IH K Q
Sbjct: 387 MEKQRRL-EQILRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPE 440
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 441 RDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 24/348 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ +G P ++ + SAG+ T +Q S P+ +QG D++ AKTG+GK+ +L+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGF-- 217
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
L R+ P +L+L PTRELA+QI EA V I L GG K Q
Sbjct: 218 -LHLQRIRNDSRMGPT-ILVLSPTRELATQIQEEA-VKFGRSSRISCTCLYGGAP-KGPQ 273
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
R I+VATPGRL D +E + + L + LVLDEAD +LD+GF I KIV
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEPQIRKIVK 330
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF----LIAP 403
+P +RQ+++++AT PK VR+I+ +L Q V +G+V+ V K ++AP
Sbjct: 331 EIPTKRQTLMYTATWPKGVRKIAADLLVNPAQ----VNIGNVDELVANKSITQHIEVVAP 386
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E ++ IL+ Q P KVI+FC T M L + R+ IH K Q
Sbjct: 387 MEKQRRL-EQILRS---QEPGSKVIIFCSTKRMCDQLTRNLTRQ--FGAAAIHGDKSQPE 440
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ V+ P E Y+H
Sbjct: 441 RDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 17/396 (4%)
Query: 157 EQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGK 216
E++++++ K F E G+ +KA G+ + +++Q +LP L+G DV+ A+TG+GK
Sbjct: 2 EEENEVV--KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGK 59
Query: 217 SAAFLLPAIETVLKAMSTN---TSQRVSP-ILVLILCPTRELASQIAAEAKVLLKHHEGI 272
+ AF +P ++ +L+ + + +R P +L PTRELA QIA + + L +
Sbjct: 60 TGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEAL-GADISL 118
Query: 273 GVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADH 332
LVGG+ L P ++VATPGRL DH+ + G S++ L+ LVLDEAD
Sbjct: 119 RCAVLVGGIDRMQQTIALGKRP-HVIVATPGRLWDHMSDTKGFSLK--SLKYLVLDEADR 175
Query: 333 LLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETP 392
LL+ F K + +I++ +P +R++ LFSAT+ K+VR++ + L+ + +V+T
Sbjct: 176 LLNEDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTL 235
Query: 393 VQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVK 452
Q + F+ A ++ + + +IL E P+ ++F T + VLR + +
Sbjct: 236 KQ-QYRFVAAKYKDCYLV--YILSE----MPESTSMIFTRTCDGTRFLALVLRSLGFRAI 288
Query: 453 EIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXX 512
I + Q R ++FK + ILV +DV+SRG++ P V +V+ IP + + YIH
Sbjct: 289 PISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRV 348
Query: 513 XXXXXXXXXXXXILLIAPWEEYFLDEIKDLPLKKIP 548
I L+ +E + +I+ L KK+P
Sbjct: 349 GRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLP 384
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 24/348 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ + P + + SAG+ + +Q S P+ +Q D++ AKTG+GK+ +L+P
Sbjct: 231 FNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGF-- 288
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
+ + R+ P +L+L PTRELA+QI EA K + I L GG
Sbjct: 289 -MHLQRIHNDSRMGPT-ILVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQL 345
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
K ++ I+VATPGRL D +E K + L + LVLDEAD +LD+GF I KIV+
Sbjct: 346 KEIERG-VDIVVATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVN 401
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV---QIKQSF-LIAP 403
+P +RQ+++++AT PKEVR+I+ +L Q V +G+V+ V I Q+ ++AP
Sbjct: 402 EVPTKRQTLMYTATWPKEVRKIAADLLVNPAQ----VNIGNVDELVANKSITQTIEVLAP 457
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLY 462
E H ++ IL+ Q P K+I+FC+ M L + R IH K Q
Sbjct: 458 MEKHSRL-EQILRS---QEPGSKIIIFCSTKRMCDQLARNLTR--TFGAAAIHGDKSQAE 511
Query: 463 RTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R V ++F+ + +LV++DV++RG++ D+ +V+ P E Y+H
Sbjct: 512 RDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 559
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 22/347 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ SG+ P ++ L SAG+ T +Q + P+ LQ D++ AKTG+GK+ +L+PA
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF-- 494
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
+L N S R P VLIL PTRELA+QI EA + I L GG
Sbjct: 495 ILLRHCRNDS-RNGPT-VLILAPTRELATQIQDEA-LRFGRSSRISCTCLYGGAPKGPQL 551
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
K L+ I+VATPGRL D +E K + + +LVLDEAD +LD+GF I KIV+
Sbjct: 552 KELERG-ADIVVATPGRLNDILEMKM---IDFQQVSLLVLDEADRMLDMGFEPQIRKIVN 607
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVE---TPVQIKQSFLIAPH 404
+P +RQ+++++AT PKEVR+I+ +L Q V +G V+ I Q + P
Sbjct: 608 EIPPRRQTLMYTATWPKEVRKIASDLLVNPVQ----VNIGRVDELAANKAITQYVEVVPQ 663
Query: 405 ESHFQIVHHILKEHILQTPDYKVIVFCTCG-MVTSLMYQVLREMKLKVKEIHSRKPQLYR 463
+ + IL+ Q KVI+FC+ + L V R V IH K Q R
Sbjct: 664 MEKERRLEQILRS---QERGSKVIIFCSTKRLCDHLARSVGRHFGAVV--IHGDKTQGER 718
Query: 464 TRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
V ++F+ K +L+++DV++RG++ D+ +V+ P E Y+H
Sbjct: 719 DWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 185/342 (54%), Gaps = 16/342 (4%)
Query: 170 ESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVL 229
E GISP +KALSS G + +Q+A L ++G D++ +A+TGTGK+ AF +P I+ ++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 230 KAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKR 289
K + + R +P L L+L PTRELA Q+ E + + I L GG ++
Sbjct: 168 KYNAKHGRGR-NP-LCLVLAPTRELARQVEKEFRESAPSLDTI---CLYGGTPIGQQMRQ 222
Query: 290 LDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCL 349
LD + V TPGR++D ++ + + L +Q +VLDEAD +L +GF +D+E I++ L
Sbjct: 223 LDYG-VDVAVGTPGRVIDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
Query: 350 PRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQ 409
P +RQSM+FSAT+P +R +++ L +D VG + I +IA
Sbjct: 279 PEKRQSMMFSATMPSWIRSLTKKYLNNPLT-VDLVGDSDQKLADGITTYSIIADSYGRAS 337
Query: 410 IVHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSD 468
I+ ++ EH K IVF T L Y + R K + +H Q R R
Sbjct: 338 IIGPLVTEH---AKGGKCIVFTQTKRDADRLSYALAR--SFKCEALHGDISQSQRERTLA 392
Query: 469 EFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
F++ ILV++DV++RG++ P+V L++ +P + E ++H
Sbjct: 393 GFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVH 434
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 204/410 (49%), Gaps = 23/410 (5%)
Query: 113 GKYDVKKERRVMPKSYDEGSD---FSEQVE-LIKYEINKRKLSQNEGQEQQDDILTQKRF 168
G +D ++ER V P D+ F+EQ +I ++ + + G + T
Sbjct: 106 GGWD-RREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEI 164
Query: 169 DESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETV 228
D L I+ Y+ T VQ ++P+ L+G D++ A+TG+GK+AAF P I +
Sbjct: 165 DLGEALNLNIRRCK---YVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGI 221
Query: 229 LK---AMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+K S+ V P L +IL PTRELASQI EAK + G+ V GG
Sbjct: 222 MKDQHVQRPRGSRTVYP-LAVILSPTRELASQIHDEAKK-FSYQTGVKVVVAYGGTPINQ 279
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
+ L+ ILVATPGRL D +E ++ +S+++ ++ L LDEAD +LD+GF I KI
Sbjct: 280 QLRELERG-VDILVATPGRLNDLLE-RARVSMQM--IRFLALDEADRMLDMGFEPQIRKI 335
Query: 346 V---DCLPRQ-RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG-SVETPVQIKQSFL 400
V D PR RQ++LFSAT P+E++R++ L + ++ +G S + VQ + L
Sbjct: 336 VEQMDMPPRGVRQTLLFSATFPREIQRLAADFLA-NYIFLAVGRVGSSTDLIVQRVEFVL 394
Query: 401 IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
+ SH + H +E+ +Q +VF + L IH + Q
Sbjct: 395 DSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQ 454
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R FK + ILV++DV++RG++ P V V+ +P D + Y+H
Sbjct: 455 QEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 504
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 185/349 (53%), Gaps = 19/349 (5%)
Query: 169 DESGISPLTI-----KALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLP 223
+E IS L++ ++L G H+ +Q A L LQG D++ +AKTGTGK+ AF +P
Sbjct: 100 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 159
Query: 224 AIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 281
I+ + + T+ R S L L+L PTRELA Q+ E K + + V GGV
Sbjct: 160 IIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGV 216
Query: 282 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 341
+ + Q L + ++V TPGR++D +E G S++L ++ LVLDEAD +L +GF +
Sbjct: 217 SYTIQQSAL-TRGVDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFEEA 272
Query: 342 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 401
+E I++ LP +RQSMLFSAT+P V+++++ L ID VG + IK +
Sbjct: 273 VESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYAIA 331
Query: 402 APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 461
S I+ ++ + K IVF + L + + +H Q
Sbjct: 332 TTSTSKRTILSDLI---TVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQH 387
Query: 462 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R R + F++ K +LV++DV+SRG++ P+V LV+ +P D E ++H
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 185/349 (53%), Gaps = 19/349 (5%)
Query: 169 DESGISPLTI-----KALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLP 223
+E IS L++ ++L G H+ +Q A L LQG D++ +AKTGTGK+ AF +P
Sbjct: 100 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 159
Query: 224 AIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGV 281
I+ + + T+ R S L L+L PTRELA Q+ E K + + V GGV
Sbjct: 160 IIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGV 216
Query: 282 RFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKD 341
+ + Q L + ++V TPGR++D +E G S++L ++ LVLDEAD +L +GF +
Sbjct: 217 SYTIQQSAL-TRGVDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFEEA 272
Query: 342 IEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI 401
+E I++ LP +RQSMLFSAT+P V+++++ L ID VG + IK +
Sbjct: 273 VESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYAIA 331
Query: 402 APHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQL 461
S I+ ++ + K IVF + L + + +H Q
Sbjct: 332 TTSTSKRTILSDLI---TVYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQH 387
Query: 462 YRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R R + F++ K +LV++DV+SRG++ P+V LV+ +P D E ++H
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 178/345 (51%), Gaps = 13/345 (3%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F ++ ++A++ G+ T +Q P+ L+G D++ A+TG+GK+ A+LLPA+
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
V + Q PI VLIL PTRELA QI E++ G+ + GG K
Sbjct: 225 VHV--SAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKF-GLRSGVRSTCIYGGAP-KG 279
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
Q R +I++ATPGRL+D +E + L + LVLDEAD +LD+GF I KI
Sbjct: 280 PQIRDLRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKI 336
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHE 405
V + RQ++L+SAT P+EV +++ L+ ++ I +G ++ I Q I P
Sbjct: 337 VSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPTP 394
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
+ + +LK+ + + K+++F + + LR IH K Q R R
Sbjct: 395 EKYNRLLTLLKQLMDGS---KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDR 451
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
V EFK + I+ ++DV++RG++ D+ V+ P E YIH
Sbjct: 452 VLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIH 496
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 205/400 (51%), Gaps = 23/400 (5%)
Query: 163 LTQKRFD--ESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAF 220
LT+ RF E +S I+AL+ + + T VQ A++P+ DV V A TG+GK+ AF
Sbjct: 11 LTETRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAF 70
Query: 221 LLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGG 280
++P +E + + ST+ + ++ +I+ PTREL++QI A+ + + LVGG
Sbjct: 71 VVPLVEILRR--STSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGG 128
Query: 281 VRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRK 340
K D K ++ + C +L+ TPGRL D +E + R L++L+LDEAD LL++GF++
Sbjct: 129 REVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFR--NLEILILDEADRLLEMGFQR 186
Query: 341 DIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL 400
+ I+ LP+QR++ LFSAT + V +++ L R ++ E+ Q+ S
Sbjct: 187 QVNYIISRLPKQRRTGLFSATQTEGVEELAKAGL-RNPVRVEVRAKSKSESSQQLTNS-- 243
Query: 401 IAPHESHFQIVH-------HILKEHILQTPDYKVIV-FCTCGMVT--SLMYQVLREMK-L 449
P H + + L + +++ D K+IV F TC V L+ + +K +
Sbjct: 244 KTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSI 303
Query: 450 KVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYI 509
+ IH Q R + F ++ L+ +DV++RG++ P + V+Q P D +
Sbjct: 304 SLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFN 363
Query: 510 HXXXXXXXXXXXXXXILLIAPWEEYFLDEIKDLPLKKIPL 549
H I+ + P EE +++ ++ ++++PL
Sbjct: 364 HRAGRTARLGRQGRAIVFLLPKEEAYVEFMR---IRRVPL 400
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 182/346 (52%), Gaps = 15/346 (4%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F++ G S + A+ Y T +Q +LP+ L G DV+ AKTG+GK+AAF+LP I
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ M QR + +I PTRELA QI EAK K + G+ V ++ GG+
Sbjct: 288 ---VHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAY-GLRVSAVYGGMSKHE 343
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
K L + C+I+VATPGRL+D ++ K ++ +M LVLDEAD + DLGF + I
Sbjct: 344 QFKELKAG-CEIVVATPGRLIDMLKMK---ALTMMRASYLVLDEADRMFDLGFEPQVRSI 399
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQY-IDTVGMGSVETPVQIKQSFLIAPH 404
V + RQ++LFSAT+P +V ++++ +L + + VGM + + I Q + P
Sbjct: 400 VGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANED----ITQVVNVIPS 455
Query: 405 ESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRT 464
++ + + +L++ + V+VF + + L KV +H K Q R
Sbjct: 456 DA--EKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRM 513
Query: 465 RVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+FK +L+++DV++RG++ + V+ I D + ++H
Sbjct: 514 ETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVH 559
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 181/362 (50%), Gaps = 29/362 (8%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
+ ++ES ++ +KA+ AGY + +Q A++P+ LQ DV+ A+TG+GK+AAF+LP +
Sbjct: 313 RSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ + + +++ PTRELA QI E V H+ G V S+VGG +
Sbjct: 373 AYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEET-VKFAHYLGFRVTSIVGGQSIE- 430
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
+Q + C+I++ATPGRL+D +E + + L +VLDEAD ++D+GF + +
Sbjct: 431 EQGLKITQGCEIVIATPGRLIDCLERRYAV---LNQCNYVVLDEADRMIDMGFEPQVAGV 487
Query: 346 VDCLPRQ-----------------RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGS 388
+D +P R + +FSAT+P V R+++ L+ + + T+G
Sbjct: 488 LDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR--NPVVVTIGTAG 545
Query: 389 VETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMK 448
T + I Q ++ F + +L E +T IVF + + L +
Sbjct: 546 KTTDL-ISQHVIMMKESEKFFRLQKLLDELGEKT----AIVFVNTKKNCDSIAKNLDKAG 600
Query: 449 LKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQY 508
+V +H K Q R + F+ + +LV++DV RG++ PDV V+ +P E Y
Sbjct: 601 YRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMY 660
Query: 509 IH 510
H
Sbjct: 661 TH 662
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 188/376 (50%), Gaps = 16/376 (4%)
Query: 178 IKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS 237
I+AL +G+ T VQ ++P DV+V A TG+GK+ AFLLP IE + + S +
Sbjct: 28 IEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRR--SNSYP 85
Query: 238 QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQI 297
+ ++ +I+ PTREL++QI A+ + + LVGG + D L+ + +
Sbjct: 86 PKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANL 145
Query: 298 LVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSML 357
L+ TPGRL D ++ + R L++L+LDEAD LLD+GF+K + I+ LP+QR++ L
Sbjct: 146 LIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGL 203
Query: 358 FSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKE 417
FSAT + V +++ L+ + I S + + + Q+VH
Sbjct: 204 FSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVH----- 258
Query: 418 HILQTPDYKVIVF---CTCGMVTSLMYQVLREMK-LKVKEIHSRKPQLYRTRVSDEFKES 473
+++ + K++VF C C L+ + +K + H + Q R F E+
Sbjct: 259 LLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEA 318
Query: 474 KQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWEE 533
+L+ +DV++RG++ P + V+Q P D + +IH I+ + P E
Sbjct: 319 SSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKET 378
Query: 534 YFLDEIKDLPLKKIPL 549
D ++ + ++++PL
Sbjct: 379 ---DYVEFMRIRRVPL 391
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 183/347 (52%), Gaps = 21/347 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F E +S ++A + GY T +Q A +P+ L G D+ A TG+GK+AAF LP +E
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
+L +RV VLIL PTRELA QI + + L + + I +VGG+ + +
Sbjct: 229 LL-----FRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTD-IKCGLIVGGLSVREQE 282
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
L S P I+VATPGR++DH+ N +SV L L +L+LDEAD LL GF +I ++V
Sbjct: 283 VVLRSMP-DIVVATPGRMIDHLRN--SMSVDLDDLAVLILDEADRLLQTGFATEITELVR 339
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGM----GSVETPVQIKQSFLIAP 403
P++RQ+MLFSAT+ +EV+ + +L L + + G E V+I+++
Sbjct: 340 LCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT----- 394
Query: 404 HESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYR 463
E++ + V L +T KVI+F + + LK E+H Q R
Sbjct: 395 REANQEAV---LLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQR 451
Query: 464 TRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+ F++ + L+++DV++RG++ V V+ P + + Y+H
Sbjct: 452 LDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVH 498
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 33/369 (8%)
Query: 149 KLSQNEGQEQQDDILTQK--RFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDV 206
KL + + Q +D+ K F++ + ++ + G+ + +QE S+P+ L G D+
Sbjct: 135 KLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDI 194
Query: 207 LVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLL 266
L +AK GTGK+ AF +P +E + + I +IL PTRELA Q + K L
Sbjct: 195 LARAKNGTGKTGAFCIPTLEKIDPENNV--------IQAVILVPTRELALQTSQVCKELS 246
Query: 267 KHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLV 326
K+ + I V GG + D RL P +LV TPGR+LD K G+ V L MLV
Sbjct: 247 KYLK-IEVMVTTGGTSLRDDIMRL-YQPVHLLVGTPGRILDLA--KKGVCV-LKDCAMLV 301
Query: 327 LDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGM 386
+DEAD LL + F+ IE+++ LP RQ ++FSAT P V+ LK+ YI
Sbjct: 302 MDEADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKP--YI----- 354
Query: 387 GSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKV-----IVFCTCGMVTSLMY 441
+ + + ++ V K H L T K+ I+FC L+
Sbjct: 355 ------INLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLA 408
Query: 442 QVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGI 501
+ + E+ IH++ Q +R RV +F+ LV +D+ +RG++ V +V+
Sbjct: 409 KKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 468
Query: 502 PPDREQYIH 510
P E Y+H
Sbjct: 469 PRTSESYLH 477
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 172/324 (53%), Gaps = 14/324 (4%)
Query: 189 MTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPIL--VL 246
+ R A L LQG D++ +AKTGTGK+ AF +P I+ + + T+ R S L L
Sbjct: 32 LLRNVRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFL 91
Query: 247 ILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLL 306
+L PTRELA Q+ E K + + V GGV + + Q L + ++V TPGR++
Sbjct: 92 VLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVSYTIQQSAL-TRGVDVVVGTPGRII 147
Query: 307 DHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEV 366
D +E G S++L ++ LVLDEAD +L +GF + +E I++ LP +RQSMLFSAT+P V
Sbjct: 148 DLIE---GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWV 204
Query: 367 RRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYK 426
+++++ L ID VG + IK + S I+ ++ + K
Sbjct: 205 KKLARKYLDNPLN-IDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY---AKGGK 260
Query: 427 VIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSR 486
IVF + L + + +H Q R R + F++ K +LV++DV+SR
Sbjct: 261 TIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASR 319
Query: 487 GMNYPDVTLVLQVGIPPDREQYIH 510
G++ P+V LV+ +P D E ++H
Sbjct: 320 GLDIPNVDLVIHYELPNDPETFVH 343
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 176/350 (50%), Gaps = 14/350 (4%)
Query: 161 DILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAF 220
D + F+ G++ ++ G T VQ +P L G DVL A+TG+GK+AAF
Sbjct: 53 DTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAF 112
Query: 221 LLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGG 280
LP + + ++ + L++ PTRELA Q+A + K L + +VGG
Sbjct: 113 ALPILHRL--------AEDPYGVFALVVTPTRELAFQLAEQFKAL-GSCLNLRCSVIVGG 163
Query: 281 VRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRK 340
+ L S P I++ TPGR+ +EN + + LVLDEAD +LD+GF+
Sbjct: 164 MDMLTQTMSLVSRP-HIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQD 222
Query: 341 DIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL 400
++ I CLP+ RQ++LFSAT+ ++ + + + + Y G+ +V+T + Q F+
Sbjct: 223 ELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDT---LTQQFI 279
Query: 401 IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
++ + HIL + + +I TC L +L E++++ +HS Q
Sbjct: 280 FEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSL-MLDELEVENIAMHSLNSQ 338
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R +FK K IL+++DV+SRG++ P V LV+ IP D Y+H
Sbjct: 339 SMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVH 388
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 174/345 (50%), Gaps = 13/345 (3%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F + G ++ + AG+ T +Q P+ ++G D++ A+TG+GK+ ++LLPAI
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
V + PI VL+L PTRELA QI EA + I + GGV K
Sbjct: 159 VHV--NAQPMLAHGDGPI-VLVLAPTRELAVQIQQEASKFGSSSK-IKTTCIYGGVP-KG 213
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
Q R +I++ATPGRL+D +E+ + L + LVLDEAD +LD+GF I KI
Sbjct: 214 PQVRDLQKGVEIVIATPGRLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHE 405
V + RQ++ +SAT PKEV ++S+ L ++ I +G ++ I+Q +
Sbjct: 271 VSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVI--IGSSDLKANRAIRQIVDVISES 328
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
+ + +L E I+ +++VF + + LR IH K Q R
Sbjct: 329 QKYNKLVKLL-EDIMDGS--RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
V EF+ K I+ ++DV++RG++ DV V+ P E Y+H
Sbjct: 386 VLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 164/332 (49%), Gaps = 13/332 (3%)
Query: 186 YIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPI-- 243
Y+ T VQ ++P+ G D++ A+TG+GK+AAF P I ++K + V +
Sbjct: 166 YVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYP 225
Query: 244 LVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPG 303
L +IL PTRELA QI EA+ + G+ V GG + L+ ILVATPG
Sbjct: 226 LAVILSPTRELACQIHDEAR-KFSYQTGVKVVVAYGGTPVNQQIRELERG-VDILVATPG 283
Query: 304 RLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCL----PRQRQSMLFS 359
RL D +E V L ++ L LDEAD +LD+GF I KIV + P RQ+MLFS
Sbjct: 284 RLNDLLERG---RVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 340
Query: 360 ATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL-IAPHESHFQIVHHILKEH 418
AT P+E++R++ L + ++ +GS + + F+ + SH + H +E+
Sbjct: 341 ATFPREIQRLASDFLS-NYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQREN 399
Query: 419 ILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLIL 478
Q +VF + L IH + Q R FK + IL
Sbjct: 400 GNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPIL 459
Query: 479 VSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
V++DV++RG++ P V V+ +P D + Y+H
Sbjct: 460 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 491
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 178/340 (52%), Gaps = 16/340 (4%)
Query: 172 GISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKA 231
GISP +KAL G + +Q+A L ++G D++ +A+TGTGK+ AF +P I+ ++K
Sbjct: 122 GISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK- 180
Query: 232 MSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLD 291
+ + +P L+L PTRELA Q+ E + + + L GG + L+
Sbjct: 181 FNAKHGRGKNP-QCLVLAPTRELARQVEKEFR---ESAPSLDTICLYGGTPIGQQMRELN 236
Query: 292 SDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPR 351
+ V TPGR++D ++ + + L +Q +VLDEAD +L +GF +D+E I+ LP
Sbjct: 237 YG-IDVAVGTPGRIIDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPA 292
Query: 352 QRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIV 411
+RQSM+FSAT+P +R +++ L ID VG + I + A I+
Sbjct: 293 KRQSMMFSATMPSWIRSLTKKYLNNPLT-IDLVGDSDQKLADGITMYSIAADSYGRASII 351
Query: 412 HHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEF 470
++KEH K IVF T L + + + K + +H Q R R F
Sbjct: 352 GPLVKEH---GKGGKCIVFTQTKRDADRLAFGLAKSYKCEA--LHGDISQAQRERTLAGF 406
Query: 471 KESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
++ ILV++DV++RG++ P+V LV+ +P + E ++H
Sbjct: 407 RDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVH 446
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 31/338 (9%)
Query: 178 IKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS 237
+K + G+ + +QE S+P+ L G D+L +AK GTGK+ AF +P +E + + +
Sbjct: 136 LKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKI------DPN 189
Query: 238 QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQI 297
V I +IL PTRELA Q + K L K+ I V GG + D RL P +
Sbjct: 190 NNV--IQAMILVPTRELALQTSQVCKELSKYLN-IQVMVTTGGTSLRDDIMRL-HQPVHL 245
Query: 298 LVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSML 357
LV TPGR+LD K G+ V L MLV+DEAD LL F+ +E+++ LP+ RQ ++
Sbjct: 246 LVGTPGRILDLT--KKGVCV-LKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLM 302
Query: 358 FSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKE 417
FSAT P V+ L++ + + + + ++ V K
Sbjct: 303 FSATFPVTVKAFKDRHLRKPYV-------------INLMDQLTLMGVTQYYAFVEERQKV 349
Query: 418 HILQTPDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKE 472
H L T K+ I+FC L+ + + E+ IH++ Q +R RV EF+
Sbjct: 350 HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRN 409
Query: 473 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
LV +D+ +RG++ V +V+ P E Y+H
Sbjct: 410 GACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 31/338 (9%)
Query: 178 IKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS 237
+K + G+ + +QE S+P+ L G D+L +AK GTGK+ AF +P +E + + +
Sbjct: 136 LKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKI------DPN 189
Query: 238 QRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQI 297
V I +IL PTRELA Q + K L K+ I V GG + D RL P +
Sbjct: 190 NNV--IQAMILVPTRELALQTSQVCKELSKYLN-IQVMVTTGGTSLRDDIMRL-HQPVHL 245
Query: 298 LVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSML 357
LV TPGR+LD K G+ V L MLV+DEAD LL F+ +E+++ LP+ RQ ++
Sbjct: 246 LVGTPGRILDLT--KKGVCV-LKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLM 302
Query: 358 FSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKE 417
FSAT P V+ L++ + + + + ++ V K
Sbjct: 303 FSATFPVTVKAFKDRHLRKPYV-------------INLMDQLTLMGVTQYYAFVEERQKV 349
Query: 418 HILQTPDYKV-----IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKE 472
H L T K+ I+FC L+ + + E+ IH++ Q +R RV EF+
Sbjct: 350 HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRN 409
Query: 473 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
LV +D+ +RG++ V +V+ P E Y+H
Sbjct: 410 GACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 17/333 (5%)
Query: 186 YIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTN---TSQRVSP 242
Y+ T VQ ++P+ L D++ A+TG+GK+AAF P I ++K S+ V P
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 243 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 302
V IL PTRELA QI EAK + G+ V GG + L+ C ILVATP
Sbjct: 231 FAV-ILSPTRELACQIHDEAKKF-SYQTGVKVVVAYGGTPIHQQLRELERG-CDILVATP 287
Query: 303 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV---DCLPRQ-RQSMLF 358
GRL D +E ++ +S+++ ++ L LDEAD +LD+GF I KIV D PR RQ+MLF
Sbjct: 288 GRLNDLLE-RARVSMQM--IRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLF 344
Query: 359 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI-APHESHFQIVHHILKE 417
SAT P +++R++ + + ++ +GS + + F+ + SH + H +E
Sbjct: 345 SATFPSQIQRLAADFMS-NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 418 HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 477
Q +VF + L + IH + Q R FK + I
Sbjct: 404 --TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPI 461
Query: 478 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
LV++DV++RG++ P V V+ +P D + Y+H
Sbjct: 462 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 494
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 17/333 (5%)
Query: 186 YIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTN---TSQRVSP 242
Y+ T VQ ++P+ L D++ A+TG+GK+AAF P I ++K S+ V P
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 243 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 302
V IL PTRELA QI EAK + G+ V GG + L+ C ILVATP
Sbjct: 231 FAV-ILSPTRELACQIHDEAKKF-SYQTGVKVVVAYGGTPIHQQLRELERG-CDILVATP 287
Query: 303 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV---DCLPRQ-RQSMLF 358
GRL D +E ++ +S+++ ++ L LDEAD +LD+GF I KIV D PR RQ+MLF
Sbjct: 288 GRLNDLLE-RARVSMQM--IRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLF 344
Query: 359 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI-APHESHFQIVHHILKE 417
SAT P +++R++ + + ++ +GS + + F+ + SH + H +E
Sbjct: 345 SATFPSQIQRLAADFMS-NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 418 HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 477
Q +VF + L + IH + Q R FK + I
Sbjct: 404 --TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPI 461
Query: 478 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
LV++DV++RG++ P V V+ +P D + Y+H
Sbjct: 462 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 494
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 170/333 (51%), Gaps = 17/333 (5%)
Query: 186 YIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTN---TSQRVSP 242
Y+ T VQ ++P+ L D++ A+TG+GK+AAF P I ++K S+ V P
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 243 ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATP 302
V IL PTRELA QI EAK + G+ V GG + L+ C ILVATP
Sbjct: 231 FAV-ILSPTRELACQIHDEAKKF-SYQTGVKVVVAYGGTPIHQQLRELERG-CDILVATP 287
Query: 303 GRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV---DCLPRQ-RQSMLF 358
GRL D +E ++ +S+++ ++ L LDEAD +LD+GF I KIV D PR RQ+MLF
Sbjct: 288 GRLNDLLE-RARVSMQM--IRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLF 344
Query: 359 SATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLI-APHESHFQIVHHILKE 417
SAT P +++R++ + + ++ +GS + + F+ + SH + H +E
Sbjct: 345 SATFPSQIQRLAADFMS-NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 418 HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLI 477
Q +VF + L + IH + Q R FK + I
Sbjct: 404 --TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPI 461
Query: 478 LVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
LV++DV++RG++ P V V+ +P D + Y+H
Sbjct: 462 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 494
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 175/369 (47%), Gaps = 33/369 (8%)
Query: 149 KLSQNEGQEQQDDILTQK--RFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDV 206
KL + + + +D+ K F++ + + + G+ + +QE S+P+ L G D+
Sbjct: 112 KLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDI 171
Query: 207 LVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLL 266
L +AK GTGK+AAF +P +E + Q + I +I+ PTRELA Q + K L
Sbjct: 172 LARAKNGTGKTAAFCIPVLEKI--------DQDNNVIQAVIIVPTRELALQTSQVCKELG 223
Query: 267 KHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLV 326
KH + I V GG K D RL P +LV TPGR+LD K G+ V L +LV
Sbjct: 224 KHLK-IQVMVTTGGTSLKDDIMRL-YQPVHLLVGTPGRILDLT--KKGVCV-LKDCSVLV 278
Query: 327 LDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGM 386
+DEAD LL F+ +E ++ LP RQ ++FSAT P V+ L + Y+
Sbjct: 279 MDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLT--NPYV----- 331
Query: 387 GSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKV-----IVFCTCGMVTSLMY 441
+ + + + V K H L T K+ I+FC L+
Sbjct: 332 ------INLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLA 385
Query: 442 QVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGI 501
+ + E+ IH++ Q +R RV +F+ LV +D+ +RG++ V +V+
Sbjct: 386 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 445
Query: 502 PPDREQYIH 510
P + E Y+H
Sbjct: 446 PKNAETYLH 454
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 175/369 (47%), Gaps = 33/369 (8%)
Query: 149 KLSQNEGQEQQDDILTQK--RFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDV 206
KL + + + +D+ K F++ + + + G+ + +QE S+P+ L G D+
Sbjct: 112 KLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDI 171
Query: 207 LVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLL 266
L +AK GTGK+AAF +P +E + Q + I +I+ PTRELA Q + K L
Sbjct: 172 LARAKNGTGKTAAFCIPVLEKI--------DQDNNVIQAVIIVPTRELALQTSQVCKELG 223
Query: 267 KHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLV 326
KH + I V GG K D RL P +LV TPGR+LD K G+ V L +LV
Sbjct: 224 KHLK-IQVMVTTGGTSLKDDIMRL-YQPVHLLVGTPGRILDLT--KKGVCV-LKDCSVLV 278
Query: 327 LDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGM 386
+DEAD LL F+ +E ++ LP RQ ++FSAT P V+ L + Y+
Sbjct: 279 MDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLT--NPYV----- 331
Query: 387 GSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKV-----IVFCTCGMVTSLMY 441
+ + + + V K H L T K+ I+FC L+
Sbjct: 332 ------INLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLA 385
Query: 442 QVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGI 501
+ + E+ IH++ Q +R RV +F+ LV +D+ +RG++ V +V+
Sbjct: 386 KKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDF 445
Query: 502 PPDREQYIH 510
P + E Y+H
Sbjct: 446 PKNAETYLH 454
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 201/456 (44%), Gaps = 94/456 (20%)
Query: 185 GYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPIL 244
G+ T VQ ++PV L G DVLV A TGTGK+ A+L P I L+ S R
Sbjct: 49 GFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHH-LQGHSPKVD-RSHGTF 106
Query: 245 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 304
L++ PTREL Q+ + LL I ++GG + ++ RL IL+ATPGR
Sbjct: 107 ALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKG-ISILIATPGR 165
Query: 305 LLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV--------------DCLP 350
LLDH++N + + L+ ++ DEAD +L+LG+ K+IE+I+ D +P
Sbjct: 166 LLDHLKNTASFVHK--NLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVP 223
Query: 351 R--QRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG----------SVETPV----- 393
+ Q+Q++L SAT+ +V +++L L D V +G S+E+P
Sbjct: 224 KGIQKQNLLLSATLNDKVNDLAKLSLD------DPVMIGLDNTKLQQNLSIESPAAPDSD 277
Query: 394 -----------------------QIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVF 430
Q+ Q +L P + + +LK + KV+VF
Sbjct: 278 AEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVF 337
Query: 431 CTCGMVTSLMYQVLRE------------------MKLKVKEIHSRKPQLYRTRVSDEFKE 472
+ Y +L E +K K +H Q R FK
Sbjct: 338 FSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKT 397
Query: 473 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPWE 532
KQ +L+S+DV++RG+++P V ++Q P + +Y+H +L + P E
Sbjct: 398 EKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIE 457
Query: 533 EYFLDEIK-------DLPLKKI----PLPDIDPQAK 557
+L E+K + PL K+ P+P P+ K
Sbjct: 458 IDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIK 493
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 168/323 (52%), Gaps = 13/323 (4%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F ++ ++A++ G+ T +Q P+ L+G D++ A+TG+GK+ A+LLPA+
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
V + Q PI VLIL PTRELA QI E++ G+ + GG K
Sbjct: 225 VHV--SAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKF-GLRSGVRSTCIYGGAP-KG 279
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
Q R +I++ATPGRL+D +E + L + LVLDEAD +LD+GF I KI
Sbjct: 280 PQIRDLRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKI 336
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHE 405
V + RQ++L+SAT P+EV +++ L+ ++ I +G ++ I Q I P
Sbjct: 337 VSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAI--IGSTDLKANQSINQVIEIVPTP 394
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
+ + +LK+ + + K+++F + + LR IH K Q R R
Sbjct: 395 EKYNRLLTLLKQLMDGS---KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDR 451
Query: 466 VSDEFKESKQLILVSSDVSSRGM 488
V EFK + I+ ++DV++RG+
Sbjct: 452 VLAEFKSGRSPIMTATDVAARGL 474
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 195/377 (51%), Gaps = 34/377 (9%)
Query: 153 NEGQ-EQQDDILTQKRFDESGISPLTIKALSS---------AGYIHMTRVQEASLPVCLQ 202
EG+ EQQ ++T K +E+ + L A S+ + + +Q + P L
Sbjct: 91 GEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKTFEKPSPIQSHTWPFLLD 150
Query: 203 GIDVLVKAKTGTGKSAAFLLPAIETVLKAMST--NTSQRVSPILVLILCPTRELASQIAA 260
G D++ AKTG+GK+ AF +PAI VLK S++V+P L+L PTRELA QI+
Sbjct: 151 GRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT-CLVLSPTRELAVQIS- 208
Query: 261 EAKVLLKHHEGIGVQSL-VGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRL 319
VL + E G++S+ V G K Q I++ TPGRL D +E+ +RL
Sbjct: 209 --DVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNV---LRL 263
Query: 320 MGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQ 379
+ +VLDEAD +LD+GF + + I+ + RQ ++FSAT P +V +++Q +
Sbjct: 264 SDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQ-------E 316
Query: 380 YID----TVGMGSVETPVQ--IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTC 433
++D V +GSV+ + Q + + Q + +L+++ ++ +V+VF
Sbjct: 317 FMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKY-HKSQKNRVLVFALY 375
Query: 434 GMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDV 493
+ + + L++ K IH K Q RTR FKE +LV++DV++RG++ PDV
Sbjct: 376 KVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDV 435
Query: 494 TLVLQVGIPPDREQYIH 510
+V+ P E Y+H
Sbjct: 436 EVVINYTFPLTTEDYVH 452
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 183/344 (53%), Gaps = 23/344 (6%)
Query: 174 SPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMS 233
+PL K L + G + +Q ++ + L G D++ +A+TG GK+ AF+LP +E+++ +
Sbjct: 105 APLREK-LKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPA 163
Query: 234 TNTSQRV---SPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQK 288
+ + SP VL+L PTRELA Q+AA+ + +G+ S L GG + + +
Sbjct: 164 KSKRKMGYGRSPS-VLVLLPTRELAKQVAADFDA---YGGSLGLSSCCLYGGDSYPVQEG 219
Query: 289 RLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDC 348
+L I+V TPGR+ DH+E ++ + LQ VLDEAD +L +GF +D+E I+
Sbjct: 220 KLKRG-VDIVVGTPGRIKDHIERQN---LDFSYLQFRVLDEADEMLRMGFVEDVELILGK 275
Query: 349 L--PRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHES 406
+ + Q++LFSAT+P V+ IS LKR+ + ID VG ++ ++ + +
Sbjct: 276 VEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAA 335
Query: 407 HFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRV 466
+++ I+ + + + I+F + S + +L + +H PQ R
Sbjct: 336 MARLIPDIISCY---SSGGQTIIFAETKVQVSELSGLLD----GSRALHGEIPQSQREVT 388
Query: 467 SDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
F+ K LV+++V++RG++ DV L++Q P + E YIH
Sbjct: 389 LAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIH 432
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 176/345 (51%), Gaps = 19/345 (5%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F+ + P A+ GY T +Q ++P+ L G+DV+ A+TG+GK+AAFL+P +E
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 228 VLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQ 287
+ + + + LIL PTR+LA Q K L K + + V LVGG +
Sbjct: 90 LKQHVPQGG------VRALILSPTRDLAEQTLKFTKELGKFTD-LRVSLLVGGDSMEDQF 142
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
+ L P +++ATPGRL+ + +++R ++ +V DEAD L +GF + + +I+
Sbjct: 143 EELTKGP-DVIIATPGRLMHLLSEVDDMTLRT--VEYVVFDEADSLFGMGFAEQLHQILT 199
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ--IKQSFLIAPHE 405
L RQ++LFSAT+P + ++ L RE Q + VE + +K SFL E
Sbjct: 200 QLSENRQTLLFSATLPSALAEFAKAGL-REPQLVRL----DVENKISPDLKLSFLTVRPE 254
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
+ + ++++EHI + D + ++F + + + + ++ + Q R
Sbjct: 255 EKYSALLYLVREHI--SSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKI 312
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
F+ K ++L+ +D+++RG++ P + V+ PP + ++H
Sbjct: 313 HVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVH 357
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 33/358 (9%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F + + L G + T +Q LPV L G D++ A TG+GK+ F+LP I
Sbjct: 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI 205
Query: 226 ETVLKA-MSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSL-----VG 279
L+ M + PI LI+CP+RELA Q + + G L +G
Sbjct: 206 MIALQEEMMMPIAAGEGPI-GLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIG 264
Query: 280 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 339
G+ + Q + I+VATPGRL D + K + L + L LDEAD L+DLGF
Sbjct: 265 GIDMR-SQLEVVKRGVHIVVATPGRLKDMLAKKK---MSLDACRYLTLDEADRLVDLGFE 320
Query: 340 KDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSF 399
DI ++ D QRQ++LFSAT+P +++ ++ L + PV +
Sbjct: 321 DDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVK---------------PVTVNVGR 365
Query: 400 LIAPHESHFQIVHHILKE-------HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVK 452
A + Q V ++ +E LQ V++FC +++ L ++
Sbjct: 366 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAV 425
Query: 453 EIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
IH K Q R FK K+ +LV++DV+S+G+++PD+ V+ +P + E Y+H
Sbjct: 426 AIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 34/350 (9%)
Query: 174 SPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKA-M 232
SPL ++ L G +H T +Q LPV L G D++ A TG+GK+ F+LP I L+ +
Sbjct: 106 SPL-LRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEI 164
Query: 233 STNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSL-----VGGVRFKLDQ 287
+ PI L++CP+RELA Q + + G L +GGV + Q
Sbjct: 165 MMPIAAGEGPI-ALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMR-SQ 222
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
+ I+VATPGRL D + K + L ++L LDEAD L+DLGF DI + D
Sbjct: 223 LDVVKKGVHIVVATPGRLKDILAKKK---MSLDACRLLTLDEADRLVDLGFEDDIRHVFD 279
Query: 348 CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESH 407
QRQ++LFSAT+P +++ + L + PV + A +
Sbjct: 280 HFKSQRQTLLFSATMPAKIQIFATSALVK---------------PVTVNVGRAGAANLDV 324
Query: 408 FQIVHHILKE-------HILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
Q V ++ +E LQ V++FC +++ L ++ IH K Q
Sbjct: 325 IQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQ 384
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
R FK K+ +LV++DV+S+G+++PD+ V+ +P + E Y+H
Sbjct: 385 EDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVH 434
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 176/363 (48%), Gaps = 37/363 (10%)
Query: 157 EQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGK 216
E D I F++ GI ++ + G+ + +Q+ ++ LQG DV+ +A++GTGK
Sbjct: 26 ETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGK 85
Query: 217 SAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS 276
++ L + V +TS R + LIL PTRELA+Q + + H I +
Sbjct: 86 TSMIALSVCQVV------DTSSR--EVQALILSPTRELATQTEKTIQAI-GLHANIQAHA 136
Query: 277 LVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDL 336
+GG D ++L+ ++ TPGR+ D ++ +S +R +++L+LDE+D +L
Sbjct: 137 CIGGNSVGEDIRKLEH-GVHVVSGTPGRVCDMIKRRS---LRTRAIKLLILDESDEMLSR 192
Query: 337 GFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRIS--------QLVLKREHQYIDTVGMGS 388
GF+ I + LP Q L SAT+P E+ ++ ++++KR+ ++
Sbjct: 193 GFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEG----- 247
Query: 389 VETPVQIKQSFL-IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREM 447
IKQ F+ + E F + + + + ++FC + + +R
Sbjct: 248 ------IKQFFVAVEKEEWKFDTLCDLYDTLTIT----QAVIFCNTKRKVDYLSEKMRSH 297
Query: 448 KLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQ 507
V +H PQ R + +EF+ +L+++DV +RG++ V+LV+ +P +RE
Sbjct: 298 NFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 357
Query: 508 YIH 510
YIH
Sbjct: 358 YIH 360
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 15/417 (3%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K + ++G++ + + Y +Q +LP+ + G D + AKTG+GK+ F+LP +
Sbjct: 191 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 250
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ PI L++ PTREL QI ++ + K GI + GG
Sbjct: 251 RHIKDQPPVEAGD--GPI-GLVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQ 306
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
L +I+V TPGR++D + SG L + LV+DEAD + D+GF I +I
Sbjct: 307 QISELKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 365
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHE 405
+ + +RQ++LFSAT P++V +++ VL + + VG SV I Q + P
Sbjct: 366 IQNIRPERQTVLFSATFPRQVETLARKVLNKPVEI--QVGGRSVVNK-DITQLVEVRPES 422
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
F + +L E + K++VF +Y+ + + +H K Q R
Sbjct: 423 DRFLRLLELLGEW---SEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRES 479
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXI 525
+FK +L+++ V++RG++ ++ LV+ P E Y+H +
Sbjct: 480 TISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAV 539
Query: 526 LLIAPWE-EYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 581
I+ + +Y D +K L L + P+PD K + M K+ I++A G+ G
Sbjct: 540 TFISEDDAKYAPDLVKALELSEQPVPD---DLKALADGFMVKVKQGIEQAHGTGYGG 593
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 15/417 (3%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K + ++G++ + + Y +Q +LP+ + G D + AKTG+GK+ F+LP +
Sbjct: 529 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 588
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ PI L++ PTREL QI ++ + K GI + GG
Sbjct: 589 RHIKDQPPVEAGD--GPI-GLVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQ 644
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
L +I+V TPGR++D + SG L + LV+DEAD + D+GF I +I
Sbjct: 645 QISELKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 703
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHE 405
+ + +RQ++LFSAT P++V +++ VL + + VG SV I Q + P
Sbjct: 704 IQNIRPERQTVLFSATFPRQVETLARKVLNKPVEI--QVGGRSV-VNKDITQLVEVRPES 760
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
F + +L E + K++VF +Y+ + + +H K Q R
Sbjct: 761 DRFLRLLELLGEW---SEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRES 817
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXI 525
+FK +L+++ V++RG++ ++ LV+ P E Y+H +
Sbjct: 818 TISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAV 877
Query: 526 LLIAPWE-EYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 581
I+ + +Y D +K L L + P+PD K + M K+ I++A G+ G
Sbjct: 878 TFISEDDAKYAPDLVKALELSEQPVPD---DLKALADGFMVKVKQGIEQAHGTGYGG 931
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 184/392 (46%), Gaps = 39/392 (9%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F + + P ++A+ +G+ H + VQ +P + G+DV+ +AK+G GK+A F+L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----- 102
Query: 228 VLKAMSTNTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
+T Q++ P + L+LC TRELA QI E + V GGV
Sbjct: 103 -------STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDI 342
K+ + L ++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREK---DLSLKNVRHFILDECDKMLESLDMRRDV 212
Query: 343 EKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQ-YIDTVGMGSVETPVQIKQSFLI 401
++I P +Q M+FSAT+ KE+R + + ++ + Y+D ++ VQ +
Sbjct: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKL 270
Query: 402 APHESHFQIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
+ E + ++ +L D+ +V++F + + ++L E IHS Q
Sbjct: 271 SEMEKNRKL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXX 520
R FKE + ILV++D+ RG++ V +V+ +P + Y+H
Sbjct: 325 EERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
Query: 521 XXXXILLIAPW---------EEYFLDEIKDLP 543
I +A +E F +IK+LP
Sbjct: 385 KGLAITFVASASDSEVLNQVQERFEVDIKELP 416
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 184/392 (46%), Gaps = 39/392 (9%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F + + P ++A+ +G+ H + VQ +P + G+DV+ +AK+G GK+A F+L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----- 102
Query: 228 VLKAMSTNTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
+T Q++ P + L+LC TRELA QI E + V GGV
Sbjct: 103 -------STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDI 342
K+ + L ++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREK---DLSLKNVRHFILDECDKMLESLDMRRDV 212
Query: 343 EKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQ-YIDTVGMGSVETPVQIKQSFLI 401
++I P +Q M+FSAT+ KE+R + + ++ + Y+D ++ VQ +
Sbjct: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKL 270
Query: 402 APHESHFQIVHHILKEHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
+ E + ++ +L D+ +V++F + + ++L E IHS Q
Sbjct: 271 SEMEKNRKL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Query: 461 LYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXX 520
R FKE + ILV++D+ RG++ V +V+ +P + Y+H
Sbjct: 325 EERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
Query: 521 XXXXILLIAPW---------EEYFLDEIKDLP 543
I +A +E F +IK+LP
Sbjct: 385 KGLAITFVASASDSEVLNQVQERFEVDIKELP 416
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 187/425 (44%), Gaps = 64/425 (15%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F + + P ++A+ +G+ H + VQ +P + G+DV+ +AK+G GK+A F+L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----- 102
Query: 228 VLKAMSTNTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
+T Q++ P + L+LC TRELA QI E + V GGV
Sbjct: 103 -------STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDI 342
K+ + L ++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREK---DLSLKNVRHFILDECDKMLESLDMRRDV 212
Query: 343 EKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDT-------VGMGS------- 388
++I P +Q M+FSAT+ KE+R + + ++ + + VG GS
Sbjct: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPR 272
Query: 389 -------VETPVQIKQSFLIAPHESHFQ---IVHHILK----------EHILQTPDY-KV 427
+ P I + E+ +V H +K +L D+ +V
Sbjct: 273 FHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQV 332
Query: 428 IVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRG 487
++F + + ++L E IHS Q R FKE + ILV++D+ RG
Sbjct: 333 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 392
Query: 488 MNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPW---------EEYFLDE 538
++ V +V+ +P + Y+H I +A +E F +
Sbjct: 393 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVD 452
Query: 539 IKDLP 543
IK+LP
Sbjct: 453 IKELP 457
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 187/395 (47%), Gaps = 53/395 (13%)
Query: 162 ILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFL 221
+ + K F+E G+ + +L G+ T VQ A++P ++G D ++++ TG+GK+ A+L
Sbjct: 106 LFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYL 165
Query: 222 LPAIETV----LKAMSTNT-SQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQS 276
LP + + K+ S+++ + + + I +I+ P+REL QI E + LL VQ
Sbjct: 166 LPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQ 225
Query: 277 LVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDL 336
LVGG ++ L + I+V TPGR+ E G + G + LVLDE D LL
Sbjct: 226 LVGGANRMRQEEALKKNKPAIVVGTPGRI---AEISKGGKLHTHGCRFLVLDEVDELLSF 282
Query: 337 GFRKDIEKIVDCLPRQ--------------RQSMLFSATIPKEVRRISQ-------LVLK 375
FR+DI +I++ + ++ RQ++L SAT+P V R ++ LV
Sbjct: 283 NFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQA 342
Query: 376 REHQYIDTV---------------GMGSVETPVQ-----IKQSFLIAPHESHFQIVHHIL 415
+ +DTV G ++T +Q +K + I+ H+ + +
Sbjct: 343 NKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCV 402
Query: 416 KEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQ 475
H L VI F + L + E+H +L R+ V +FK +
Sbjct: 403 --HALDA--QSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEI 458
Query: 476 LILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+LV++++S+RG++ + LV+ + +P D Y H
Sbjct: 459 KVLVTNELSARGLDVAECDLVVNLELPTDAVHYAH 493
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 171/346 (49%), Gaps = 21/346 (6%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K FD+ G++ ++ + GY + +Q+ +L L+G DV+ +A++GTGK++ +
Sbjct: 22 KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC 81
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ V N S R + VL+L P+RELASQ + + H I + +GG
Sbjct: 82 QIV------NISSR--KVQVLVLSPSRELASQTEKTIQAI-GAHTNIQAHACIGGKSIGE 132
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
D K+L+ + TPGR+ D + K G S++ +++LVLDE+D +L G + I +
Sbjct: 133 DIKKLER-GVHAVSGTPGRVYDMI--KRG-SLQTKAVKLLVLDESDEMLSKGLKDQIYDV 188
Query: 346 VDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFL-IAPH 404
LP Q L SAT+P+E+ +++ + + + ++E IKQ ++ +
Sbjct: 189 YRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEG---IKQYYVDVDKE 245
Query: 405 ESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRT 464
E F + + + + I+FC + + +R V +H K Q R
Sbjct: 246 EWKFDTLCDLYGRLTIN----QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERD 301
Query: 465 RVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+ ++F+ K +L++SDV +RG++ V+ V+ IP + E YIH
Sbjct: 302 DIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIH 347
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 221/481 (45%), Gaps = 84/481 (17%)
Query: 173 ISPLTIKALSSAGYIHMTRVQEASLPVC-LQGIDVLVKAKTGTGKSAAFLLPAIETVLK- 230
+ PL +K++ + T++Q+A V QG DV+ A+TG+GK+ AF LP ++ +L
Sbjct: 197 LHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDE 256
Query: 231 --------AMSTNTSQRVSP---ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVG 279
A+ +Q+ + + LI+ PTRELA Q+ + K+ + V +VG
Sbjct: 257 REKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNL-SVKVVPIVG 315
Query: 280 GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFR 339
G+ + ++RL P +I+VATPGRL + + V L L VLDEAD +++ G
Sbjct: 316 GMFSEKQERRLKEKP-EIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHF 374
Query: 340 KDIEKIVDCLP------------------------RQRQSMLFSATIP------KEVRR- 368
++++ I+D LP ++RQ+ +FSATI K+++R
Sbjct: 375 RELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRG 434
Query: 369 -----------------ISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIV 411
+S+ R++ I + S+ P +I++SF+ + +
Sbjct: 435 SSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAP-KIEESFIKCEEKEKDAYL 493
Query: 412 HHILKEHILQTPDYKVIVFCTCGMVTSLMY--QVLREMKLKVKEIHSRKPQLYRTRVSDE 469
++IL H + IVFCT VT L + +L+ + L V + S Q R + D
Sbjct: 494 YYILSVH----GQGRTIVFCTS--VTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDR 547
Query: 470 FKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIA 529
F+ S+ IL+++D+ +RG++ +V ++ +P E Y+H I LI
Sbjct: 548 FRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIE 607
Query: 530 PWE---------EYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKID-DDIKEAAYHGW 579
P E + ++ +K PL +P + + +L + + +I+ +E A W
Sbjct: 608 PNETSKFYTLCKSFSMESVKIFPLDNSYMPAV--RKRLYLARQIYEIERKGSRENADRTW 665
Query: 580 L 580
L
Sbjct: 666 L 666
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 181/375 (48%), Gaps = 28/375 (7%)
Query: 144 EINKRKLSQ--NEGQEQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEAS 196
+ + R+ Q NE E QD+ T + FD G+ ++ + + G+ + +Q+
Sbjct: 10 QFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 197 L-PVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELA 255
+ P C +G+DV+ +A++GTGK+A F VL+ + + Q L+L PTRELA
Sbjct: 70 IVPFC-KGLDVIQQAQSGTGKTATF----CSGVLQQLDFSLIQ----CQALVLAPTRELA 120
Query: 256 SQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGI 315
QI + L + G+ V + VGG + DQ+ L + ++V TPGR+ D ++ +S
Sbjct: 121 QQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQAG-VHVVVGTPGRVFDMLKRQS-- 176
Query: 316 SVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLK 375
+R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E I++ +
Sbjct: 177 -LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMS 235
Query: 376 REHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGM 435
+ + + ++E IKQ ++ E L E + T + ++F
Sbjct: 236 KPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT---QSVIFVNTRR 289
Query: 436 VTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTL 495
+ +R V H Q R + EF+ +L+++D+ +RG++ V+L
Sbjct: 290 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349
Query: 496 VLQVGIPPDREQYIH 510
V+ +P E Y+H
Sbjct: 350 VINFDLPTQPENYLH 364
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 181/375 (48%), Gaps = 28/375 (7%)
Query: 144 EINKRKLSQ--NEGQEQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEAS 196
+ + R+ Q NE E QD+ T + FD G+ ++ + + G+ + +Q+
Sbjct: 10 QFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 197 L-PVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELA 255
+ P C +G+DV+ +A++GTGK+A F VL+ + + Q L+L PTRELA
Sbjct: 70 IVPFC-KGLDVIQQAQSGTGKTATF----CSGVLQQLDFSLIQ----CQALVLAPTRELA 120
Query: 256 SQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGI 315
QI + L + G+ V + VGG + DQ+ L + ++V TPGR+ D ++ +S
Sbjct: 121 QQIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLKRQS-- 176
Query: 316 SVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLK 375
+R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E I++ +
Sbjct: 177 -LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMS 235
Query: 376 REHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGM 435
+ + + ++E IKQ ++ E L E + T + ++F
Sbjct: 236 KPVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT---QSVIFVNTRR 289
Query: 436 VTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTL 495
+ +R V H Q R + EF+ +L+++D+ +RG++ V+L
Sbjct: 290 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349
Query: 496 VLQVGIPPDREQYIH 510
V+ +P E Y+H
Sbjct: 350 VINFDLPTQPENYLH 364
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 28/375 (7%)
Query: 144 EINKRKLSQ--NEGQEQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEAS 196
+ + R+ Q NE + QD+ T + FD G+ ++ + + G+ + +Q+
Sbjct: 10 QFDTRQFDQRLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 197 L-PVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELA 255
+ P C +G+DV+ +A++GTGK+A F ++ + A+ + L+L PTRELA
Sbjct: 70 IVPFC-KGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQA--------LVLAPTRELA 120
Query: 256 SQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGI 315
QI + L ++G+ V + VGG + DQ+ L + ++V TPGR+ D + +S
Sbjct: 121 QQIEKVMRAL-GDYQGVKVHACVGGTSVREDQRILQAG-VHVVVGTPGRVFDMLRRQS-- 176
Query: 316 SVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLK 375
+R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E I++ +
Sbjct: 177 -LRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMS 235
Query: 376 REHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGM 435
+ + + ++E IKQ ++ E L E + T + ++F
Sbjct: 236 KPVRILVKRDELTLEG---IKQFYVNVEKEDWKLETLCDLYETLAIT---QSVIFVNTRR 289
Query: 436 VTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTL 495
+ +R V H Q R + EF+ +L+++D+ +RG++ V+L
Sbjct: 290 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349
Query: 496 VLQVGIPPDREQYIH 510
V+ +P E Y+H
Sbjct: 350 VINFDLPTQPENYLH 364
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 44/334 (13%)
Query: 178 IKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS 237
I+AL +G+ T VQ ++P DV+V A TG+GK+ AFLLP IE + + S +
Sbjct: 29 IEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRR--SNSYP 86
Query: 238 QRVSPILVLILCPTRELASQIAAEAK-VLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQ 296
+ ++ +I+ PTREL++QI A+ V L + V++ D L+ +
Sbjct: 87 PKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEA---------DMNTLEEEGAN 137
Query: 297 ILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSM 356
+L+ TPGRL D ++ + R L++L+LDEAD LLD+GF+K + I+ LP+QR++
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 195
Query: 357 LFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILK 416
LFSAT + V +++ L+ + + + Q+VH
Sbjct: 196 LFSATQTQAVADLAKAGLRNPYLKCEA--------------------DQKSSQLVH---- 231
Query: 417 EHILQTPDYKVIVF---CTCGMVTSLMYQVLREMK-LKVKEIHSRKPQLYRTRVSDEFKE 472
+++ + K++VF C C L+ + +K + H + Q R F E
Sbjct: 232 -LLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTE 290
Query: 473 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDRE 506
+ +L+ +DV++RG++ P + + + I DRE
Sbjct: 291 ASSGVLLCTDVAARGLDIPGIVYIRSLAI-KDRE 323
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 21/344 (6%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASL-PVCLQGIDVLVKAKTGTGKSAAFLLPAIE 226
FD + P ++ + + G+ + +Q+ + P C +G+DV+ +A++GTGK+A F
Sbjct: 43 FDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFC-KGLDVIQQAQSGTGKTATF----CS 97
Query: 227 TVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLD 286
VL+ + + Q L+L PTRELA QI + L + G+ Q+ VGG + D
Sbjct: 98 GVLQQLDISLVQ----CQALVLAPTRELAQQIEKVMRAL-GDYLGVKAQACVGGTSVRED 152
Query: 287 QKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIV 346
Q+ L S ++V TPGR+ D + +S +R ++M VLDEAD +L GF+ I I
Sbjct: 153 QRVLQS-GVHVVVGTPGRVFDLLRRQS---LRADAIKMFVLDEADEMLSRGFKDQIYDIF 208
Query: 347 DCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHES 406
LP + Q +FSAT+P E I++ + + + + ++E IKQ ++ E
Sbjct: 209 QLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG---IKQFYVNVDKEE 265
Query: 407 HFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRV 466
L E + T + ++F + +R V H Q R +
Sbjct: 266 WKLETLCDLYETLAIT---QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 322
Query: 467 SDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
EF+ +L+++D+ +RG++ V+LV+ +P E Y+H
Sbjct: 323 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLH 366
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 188 HMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLI 247
H R E ++P+ L+ DV+ + TG+GK+AAF+LP + + + + L+
Sbjct: 224 HPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALV 283
Query: 248 LCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLD 307
+ PTRELA QI E V + G S+ G + +L S C+I++ATPGRLLD
Sbjct: 284 MVPTRELAHQIEEET-VKFSRYLGFKAVSITGWESIEKQALKL-SQGCEIVIATPGRLLD 341
Query: 308 HVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQ--------------- 352
+E + V L LVLDEAD ++D+ F + +++D +P
Sbjct: 342 CLERR---YVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKK 398
Query: 353 --RQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQI 410
R + +FSAT+ V R+++ L+ + + T+G ET I Q ++ F
Sbjct: 399 IYRTTYMFSATMLLSVERLARKFLR--NPVVVTIG----ETTKFITQQVIMTKESDKFSR 452
Query: 411 VHHILKEHILQTPDYKVIVFC-TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDE 469
+ ++ + D IVF T V ++ + + + +V +H+ K Q R +E
Sbjct: 453 LKKLIDD---LGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEE 509
Query: 470 FKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
FK+ + +LV++DV RG++ D+ V+ +P + Y H
Sbjct: 510 FKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTH 550
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 175/374 (46%), Gaps = 31/374 (8%)
Query: 144 EINKRKLSQ--NEGQEQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEAS 196
+ + R+ Q NE E QD+ T + FD G+ ++ I Q
Sbjct: 10 QFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGFEKPSAIQ----QRGI 65
Query: 197 LPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELAS 256
+P C +G+DV+ +A++GTGK+A F VL+ + + Q L+L PTRELA
Sbjct: 66 VPFC-KGLDVIQQAQSGTGKTATF----CSGVLQQLDFSLIQ----CQALVLAPTRELAQ 116
Query: 257 QIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGIS 316
QI + L + G+ V + VGG + DQ+ L + ++V TPGR+ D ++ +S
Sbjct: 117 QIEKVMRAL-GDYLGVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLKRQS--- 171
Query: 317 VRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKR 376
+R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E I++ + +
Sbjct: 172 LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK 231
Query: 377 EHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMV 436
+ + ++E IKQ ++ E L E + T + ++F
Sbjct: 232 PVRILVKRDELTLEG---IKQFYVNVEKEEWKLETLCDLYETLAIT---QSVIFVNTRRK 285
Query: 437 TSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLV 496
+ +R V H Q R + EF+ +L+++D+ +RG++ V+LV
Sbjct: 286 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 345
Query: 497 LQVGIPPDREQYIH 510
+ +P E Y+H
Sbjct: 346 INFDLPTQPENYLH 359
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 26/360 (7%)
Query: 157 EQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEASL-PVCLQGIDVLVKA 210
E QD+ T + FD G+ ++ + + G+ + +Q+ + P C +G+DV+ +A
Sbjct: 15 EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC-KGLDVIQQA 73
Query: 211 KTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHE 270
++GTGK+A F VL+ + + Q L+L PTRELA QI + L +
Sbjct: 74 QSGTGKTATF----CSGVLQQLDFSLIQ----CQALVLAPTRELAQQIEKVMRAL-GDYL 124
Query: 271 GIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEA 330
G+ V + VGG + DQ+ L + ++V TPGR+ D ++ +S +R ++M VLDEA
Sbjct: 125 GVKVHACVGGTSVREDQRILQA-GVHVVVGTPGRVFDMLKRQS---LRADNIKMFVLDEA 180
Query: 331 DHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVE 390
D +L GF+ I I LP + Q +FSAT+P E I++ + + + + ++E
Sbjct: 181 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLE 240
Query: 391 TPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLK 450
IKQ ++ E L E + T + ++F + +R
Sbjct: 241 G---IKQFYVNVEKEEWKLETLCDLYETLAIT---QSVIFVNTRRKVDWLTDKMRSRDHT 294
Query: 451 VKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
V H Q R + EF+ +L+++D+ +RG++ V+LV+ +P E Y+H
Sbjct: 295 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLH 354
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 44/413 (10%)
Query: 170 ESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVL 229
++G++ + L Y +Q +LP+ + G D + AKTG+GK+ F+LP + +
Sbjct: 400 QTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 459
Query: 230 KAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKR 289
PI L++ PTREL QI ++ + K GI + GG
Sbjct: 460 DQPPVEAGD--GPI-GLVMAPTRELVQQIYSDIRKFSKAL-GIICVPVYGGSGVAQQISE 515
Query: 290 LDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCL 349
L +I+V TPGR++D + SG L + LV+DEAD + D+GF I +IV +
Sbjct: 516 LKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI 574
Query: 350 PRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQ 409
RQ++LFSAT P++V +++ VL + + VG SV I Q I P F
Sbjct: 575 RPDRQTVLFSATFPRQVETLARKVLNKPVEI--QVGGRSV-VNKDITQLVEIRPESERFS 631
Query: 410 IVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDE 469
+ +L E + KV+VF + S++ + +
Sbjct: 632 RLLELLGEWYEKG---KVLVF-----------------------VRSQEKSI------SD 659
Query: 470 FKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIA 529
FK +L+++ V++RG++ ++ LV+ P E Y+H + I+
Sbjct: 660 FKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 719
Query: 530 PWE-EYFLDEIKDLPLKKIPLPDIDPQAKLKIEHSMEKIDDDIKEAAYHGWLG 581
+ +Y D +K L L + P+PD K E M K+ I++A G+ G
Sbjct: 720 EDDAKYAPDLVKALELSEQPVPD---DVKAVAEGFMAKVKQGIEQAHGTGYGG 769
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 175/374 (46%), Gaps = 31/374 (8%)
Query: 144 EINKRKLSQ--NEGQEQQDDILT-----QKRFDESGISPLTIKALSSAGYIHMTRVQEAS 196
+ + R+ Q NE + QD+ T + FD G+ ++ I Q
Sbjct: 10 QFDTRQFDQRLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGFEKPSAIQ----QRGI 65
Query: 197 LPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELAS 256
+P C +G+DV+ +A++GTGK+A F ++ + A+ + L+L PTRELA
Sbjct: 66 VPFC-KGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQA--------LVLAPTRELAQ 116
Query: 257 QIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGIS 316
QI + L ++G+ V + VGG + DQ+ L + ++V TPGR+ D + +S
Sbjct: 117 QIEKVMRAL-GDYQGVKVHACVGGTSVREDQRILQAG-VHVVVGTPGRVFDMLRRQS--- 171
Query: 317 VRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKR 376
+R ++M VLDEAD +L GF+ I I LP + Q +FSAT+P E I++ + +
Sbjct: 172 LRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK 231
Query: 377 EHQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMV 436
+ + ++E IKQ ++ E L E + T + ++F
Sbjct: 232 PVRILVKRDELTLEG---IKQFYVNVEKEDWKLETLCDLYETLAIT---QSVIFVNTRRK 285
Query: 437 TSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLV 496
+ +R V H Q R + EF+ +L+++D+ +RG++ V+LV
Sbjct: 286 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 345
Query: 497 LQVGIPPDREQYIH 510
+ +P E Y+H
Sbjct: 346 INFDLPTQPENYLH 359
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 176/371 (47%), Gaps = 24/371 (6%)
Query: 147 KRKLS---QNEGQEQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQG 203
+RKL Q +G +LT F G+ P + L +AGY T +Q ++P L G
Sbjct: 91 RRKLDIHVQGQGSAVPPPVLT---FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG 147
Query: 204 IDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEA 262
+L A TG+GK+A+FL+P I S + S QR +P L ++L PTREL Q+ +A
Sbjct: 148 KSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNP-LAMVLAPTRELCVQVEDQA 206
Query: 263 KVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLM 320
K+L K G+ ++ +VGG R+ ++++ TPGR++D + ++ L
Sbjct: 207 KMLGK---GLPFKTALVVGGDPMSGQLYRIQQG-VELIIGTPGRVVDLLSKH---TIELD 259
Query: 321 GLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQY 380
+ VLDE D +L GFR + +I L Q Q +LFSATI +EV ++ + K
Sbjct: 260 NIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKE---- 314
Query: 381 IDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSL 439
I V +G+ P + + Q + + Q + IL+ P V V G L
Sbjct: 315 IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVG-ADLL 373
Query: 440 MYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQV 499
+ +K IH KP R V F + +LVS+ V RG++ V V+
Sbjct: 374 ANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVF 433
Query: 500 GIPPDREQYIH 510
+P ++YIH
Sbjct: 434 DMPSTIKEYIH 444
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 176/371 (47%), Gaps = 24/371 (6%)
Query: 147 KRKLS---QNEGQEQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQG 203
+RKL Q +G +LT F G+ P + L +AGY T +Q ++P L G
Sbjct: 91 RRKLDIHVQGQGSAVPPPVLT---FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG 147
Query: 204 IDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS-QRVSPILVLILCPTRELASQIAAEA 262
+L A TG+GK+A+FL+P I S + S QR +P L ++L PTREL Q+ +A
Sbjct: 148 KSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNP-LAMVLAPTRELCVQVEDQA 206
Query: 263 KVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLM 320
K+L K G+ ++ +VGG R+ ++++ TPGR++D + ++ L
Sbjct: 207 KMLGK---GLPFKTALVVGGDPMSGQLYRIQQG-VELIIGTPGRVVDLLSKH---TIELD 259
Query: 321 GLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREHQY 380
+ VLDE D +L GFR + +I L Q Q +LFSATI +EV ++ + K
Sbjct: 260 NIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKE---- 314
Query: 381 IDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSL 439
I V +G+ P + + Q + + Q + IL+ P V V G L
Sbjct: 315 IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVG-ADLL 373
Query: 440 MYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQV 499
+ +K IH KP R V F + +LVS+ V RG++ V V+
Sbjct: 374 ANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVF 433
Query: 500 GIPPDREQYIH 510
+P ++YIH
Sbjct: 434 DMPSTIKEYIH 444
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 188/443 (42%), Gaps = 82/443 (18%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F + + P ++A+ +G+ H + VQ +P + G+DV+ +AK+G GK+A F+L
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----- 102
Query: 228 VLKAMSTNTSQRVSP----ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRF 283
+T Q++ P + L+LC TRELA QI E + V GGV
Sbjct: 103 -------STLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLD-LGFRKDI 342
K+ + L ++ I+V TPGR+L K + L ++ +LDE D +L+ L R+D+
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREK---DLSLKNVRHFILDECDKMLESLDMRRDV 212
Query: 343 EKIVDCLPRQRQSMLFSATIPKEVR----RISQLVLKREHQYIDTVGMGS---------- 388
++I P +Q M+FSAT+ KE+R + Q L+ E + G
Sbjct: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSF 272
Query: 389 ---VETPVQIKQSFLIAPHESHF-------------------------QIVHHILK---- 416
V V + ++ L+ ++H +V H +K
Sbjct: 273 GFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEM 332
Query: 417 ------EHILQTPDY-KVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDE 469
+L D+ +V++F + + ++L E IHS Q R
Sbjct: 333 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKS 392
Query: 470 FKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIHXXXXXXXXXXXXXXILLIA 529
FKE + ILV++D+ RG++ V +V+ +P + Y+H I +A
Sbjct: 393 FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 452
Query: 530 PW---------EEYFLDEIKDLP 543
+E F +IK+LP
Sbjct: 453 SASDSEVLNQVQERFEVDIKELP 475
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 164/345 (47%), Gaps = 31/345 (8%)
Query: 172 GISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKA 231
G ++ L+ G+ T +Q ++P+ L G + A TG+GK+ AF+ P + LK
Sbjct: 147 GCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPML-IKLKR 205
Query: 232 MSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLK---HHEGIGVQSLVGGVRF-KLDQ 287
ST+ I +IL P RELA+Q A E K L+K H + + LV F KL
Sbjct: 206 PSTDG------IRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKL-- 257
Query: 288 KRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVD 347
C +L++TP RL ++ K + L ++ LVLDE+D L + K I+ +V
Sbjct: 258 ------WCDVLISTPMRLKRAIKAKK---IDLSKVEYLVLDESDKLFEQSLLKQIDCVVK 308
Query: 348 -CLPRQRQSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHE 405
C LFSAT+P V +++ ++ H + + +G T + +KQ + A E
Sbjct: 309 ACSNPSIIRSLFSATLPDSVEELARSIM---HDAVRVI-IGRKNTASETVKQKLVFAGSE 364
Query: 406 SHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTR 465
+ L++ ++ + V++F +Y L+ ++ IHS P R
Sbjct: 365 EGKLLA---LRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGEREN 421
Query: 466 VSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
D+F+ ++ +L+++DV +RGM++ + V+ P YIH
Sbjct: 422 AVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIH 466
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 76/381 (19%)
Query: 167 RFDESGISPLTIKALSSAGYIHM-----TRVQEASLPVCLQ--GIDVLVKAKTGTGKSAA 219
RF++ +SP +K L Y+ M +++Q SLP+ + ++ +A G+GK+
Sbjct: 92 RFEDLNLSPELMKGL----YVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTC 147
Query: 220 FLLPAIETVLKAMSTNTSQRVSPIL----VLILCPTRELASQIAAEAKVLLKHHEGIGVQ 275
F+L + RV P L L +CPTRELA+Q +VL K + G+
Sbjct: 148 FVLGML------------SRVDPTLREPQALCICPTRELANQ---NMEVLQKMGKFTGIT 192
Query: 276 SLVG---GVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGL---QMLVLDE 329
+ + R R +++ TPG L K ++ + +GL ++LV DE
Sbjct: 193 AELAVPDSTRGAPAATRGAPVSAHVVIGTPGTL------KKWMAFKRLGLNHLKILVFDE 246
Query: 330 ADHLLDL-GFRKDIEKIVDCLPR---QRQSMLFSAT--------IPKEVRRISQLVLKRE 377
ADH+L GFR D KI+ + R Q +LFSAT + + V+ +QL +KRE
Sbjct: 247 ADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKRE 306
Query: 378 HQYIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY-KVIVFCTCGMV 436
+D+V KQ ++ P E Q ++K+ I++ D + I+F
Sbjct: 307 DLALDSV-----------KQYKVVCPKE---QNKIEVIKDQIMELGDIGQTIIFVKTKAS 352
Query: 437 TSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLV 496
+++ L EM V +H + R ++ EFKE +L+++DV +RG + V LV
Sbjct: 353 AQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLV 412
Query: 497 LQVGIP-------PDREQYIH 510
+ +P PD E Y+H
Sbjct: 413 VNYNLPTKYETGEPDYEVYLH 433
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 39/356 (10%)
Query: 204 IDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSP----ILVLILCPTRELASQIA 259
+DV+ +AK+G GK+A F+L +T Q++ P + L+LC TRELA QI
Sbjct: 1 MDVICQAKSGMGKTAVFVL------------STLQQIEPSPGQVSALVLCHTRELAYQIC 48
Query: 260 AEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRL 319
E + V GGV K+ + L ++ I+V TPGR+L K + L
Sbjct: 49 NEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKD---LSL 105
Query: 320 MGLQMLVLDEADHLLD-LGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVLKREH 378
++ +LDE D +L+ L R+D+++I P +Q M+FSAT+ KE+R + + ++
Sbjct: 106 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 165
Query: 379 Q-YIDTVGMGSVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPDY-KVIVFCTCGMV 436
+ Y+D ++ VQ ++ E + ++ +L D+ +V++F
Sbjct: 166 EIYVDDEAKLTLHGLVQ--HYIKLSEMEKNRKL------NDLLDALDFNQVVIFVKSVSR 217
Query: 437 TSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLV 496
+ + ++L E IHS Q R FKE + ILV++D+ RG++ V +V
Sbjct: 218 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 277
Query: 497 LQVGIPPDREQYIHXXXXXXXXXXXXXXILLIAPW---------EEYFLDEIKDLP 543
+ +P + Y+H I +A +E F +IK+LP
Sbjct: 278 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELP 333
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 180/397 (45%), Gaps = 56/397 (14%)
Query: 144 EINKRKLSQNEGQEQQDDILTQKRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQG 203
E NK K ++ G ++K F E G S +KAL + +Q + + G
Sbjct: 358 ERNKTKDTRETG------FFSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDG 411
Query: 204 IDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPIL--VLILCPTRELASQIAAE 261
++ ++G+GK+ A+L+P I+ L+ + SP V++L PT ELASQ+ A
Sbjct: 412 KSCIIADQSGSGKTLAYLVPVIQR-LREEELQGHSKSSPGCPRVIVLVPTAELASQVLAN 470
Query: 262 AKVLLKHHEGIGVQSLV--GGVRFKLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRL 319
+ + K G+ +S+V GG R + + L+ +L+ATPGR ++ N+ GI + L
Sbjct: 471 CRSISK--SGVPFRSMVVTGGFRQRTQLENLEQG-VDVLIATPGRFT-YLMNE-GI-LGL 524
Query: 320 MGLQMLVLDEADHLL-DLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVR----------- 367
L+ +LDE D L D F ++ +++ P Q + +AT+P E+
Sbjct: 525 SNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCE 584
Query: 368 -----RISQLVLKREHQYIDTVGMGSVE-TPVQIKQSFLIAPHESHFQIVHHILKEHILQ 421
R+ ++ E +D G + E TP E+ FQ L + + +
Sbjct: 585 VVMGPRVHRVSNALEEFLVDCSGDDNAEKTP------------ETAFQNKKTALLQIMEE 632
Query: 422 TPDYKVIVFC----TCGMVTSLMYQVLR-EMKLKVKEIHSRKPQLYRTRVSDEFK----E 472
P K I+FC TC V ++ +V R E +L V H+ Q R EF E
Sbjct: 633 NPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPE 692
Query: 473 SKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYI 509
L LV +D +SRG+++ V V+ P D +Y+
Sbjct: 693 ENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYV 729
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 170/358 (47%), Gaps = 29/358 (8%)
Query: 168 FDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIET 227
F E G+S + AL T +Q +P ++ V++ + TG+GK+ A+LLP ++
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ- 172
Query: 228 VLKAMSTNTSQRVSP--ILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+++ N ++ P ++LCPTREL+ Q+ AK + HH + GG R +
Sbjct: 173 LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKS-ISHHARFRSILVSGGSRIRP 231
Query: 286 DQKRLDSDPCQILVATPGRLLDHVENKSGISVRLMGLQMLVLDEADHLLDLGFRKDIEKI 345
+ L+ + ++V TPGR+L H+E + + + LVLDEAD + D GF +I K
Sbjct: 232 QEDSLN-NAIDMVVGTPGRILQHIEEGNMV---YGDIAYLVLDEADTMFDRGFGPEIRKF 287
Query: 346 VDCLPRQR---------QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMGSVETPV-QI 395
+ L QR Q++L +AT+ V Q ++ E Q I+ + ++ +
Sbjct: 288 LAPL-NQRALKTNDQGFQTVLVTATMTMAV----QKLVDEEFQGIEHLRTSTLHKKIANA 342
Query: 396 KQSFL-IAPHESHFQIVHHILKEHILQTPDYKVIVFCTCGMVTSLMYQVLREMKLKVKEI 454
+ F+ ++ E + + +L+ + + KV+VFC + + L E ++
Sbjct: 343 RHDFIKLSGGEDKLEALLQVLEPSLAK--GSKVMVFCNTLNSSRAVDHYLSENQISTVNY 400
Query: 455 HSRKPQLYRTRVSDEFK--ESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
H P R +FK E LV +D+++RG++ DV V+ P + Y+H
Sbjct: 401 HGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLH 457
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 196 SLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTS-QRVSPILVLILCPTREL 254
++P L G +L A TG+GK+A+FL+P I S + S QR +P L ++L PTREL
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNP-LAMVLAPTREL 61
Query: 255 ASQIAAEAKVLLKHHEGIGVQS--LVGGVRFKLDQKRLDSDPCQILVATPGRLLDHVENK 312
Q+ +AK+L K G+ ++ +VGG R+ ++++ TPGR++D +
Sbjct: 62 CVQVEDQAKMLGK---GLPFKTALVVGGDPMSGQLYRIQQG-VELIIGTPGRVVDLLSKH 117
Query: 313 SGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQL 372
++ L + VLDE D +L GFR + +I L Q Q +LFSATI +EV ++
Sbjct: 118 ---TIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGS 173
Query: 373 VLKREHQYIDTVGMGSVETPVQ-IKQSFLIAPHESHFQIVHHILKEHILQTPDYKVIVFC 431
+ K I V +G+ P + + Q + + Q + IL+ P V V
Sbjct: 174 LAKE----IILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSS 229
Query: 432 TCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYP 491
G L + +K IH KP R V F + +LVS+ V RG++
Sbjct: 230 RVG-ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLL 288
Query: 492 DVTLVLQVGIPPDREQYIH 510
V V+ +P ++YIH
Sbjct: 289 VVRQVIVFDMPSTIKEYIH 307
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 33/225 (14%)
Query: 166 KRFDESGISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAI 225
K F+E G+ I+AL+ G T +Q++++P L+G DV+ +AKTG+GK+ A+LLP +
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 226 ETVLKAMSTNTSQRVSPILVLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKL 285
+ + A S + ++++P IL P+REL Q+ E V SL+ R +L
Sbjct: 106 QKLFSADSV-SKKKLAPS-AFILVPSRELCQQVYTE------------VSSLIELCRVQL 151
Query: 286 DQKRLDSDPC------------QILVATPGRL----LDHVENKSGISVRLMGLQMLVLDE 329
+L S +ILV+TP + V + +S L +LVLDE
Sbjct: 152 KAVQLTSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVS---ESLSILVLDE 208
Query: 330 ADHLLDLGFRKDIEKIVDCLPRQRQSMLFSATIPKEVRRISQLVL 374
AD LL G+ ++ + +PR+ Q +L SAT +V ++ +L+L
Sbjct: 209 ADLLLSYGYEDNLRSVTSIIPRRCQCLLMSATTSSDVEKLKKLIL 253
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 77/367 (20%)
Query: 205 DVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPILVLILCPTRELASQI-----A 259
D+ V + TG+GK+ ++ LP ++ + S+ V + L++ PTR+LA Q+ A
Sbjct: 74 DICVNSPTGSGKTLSYALPIVQLL-------ASRPVRCLRALVVLPTRDLALQVKDVFDA 126
Query: 260 AEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPC--------------QILVATPGRL 305
V L +G S+ G + + +LD+ C ILVATPGRL
Sbjct: 127 IAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRL 186
Query: 306 LDHVENKSGISVRLMGLQMLVLDEADHLLDLGF--------------------------- 338
+DH+ N G + L L+ LV+DE D LL +
Sbjct: 187 MDHINNTKGFT--LEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVP 244
Query: 339 ----------RKDIEKIVDCLPRQR-QSMLFSATIPKEVRRISQLVLKREHQYIDTVGMG 387
R+ +E+ P R M+ SAT+ ++ ++ QL L H T G
Sbjct: 245 SAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDL--HHPLFMTTGGS 302
Query: 388 SVETPVQIKQSFLIAPHESHFQIVHHILKEHILQTPD-YKVIVFCTCGMVTSLMYQVLR- 445
P +++ LI E+ + V+ + +L++ + K I+F + T + ++L
Sbjct: 303 RYRLPEKLECLRLIC--ETGMKPVYLV---ALLKSWEGEKCIIFTSSVETTRRLCKLLNF 357
Query: 446 --EMKLKVKEIHSRKPQLYRTRVSDEFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPP 503
+ K+K KE Q R++ F++ +LV+SD +RGM+ VT V+ +PP
Sbjct: 358 FGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPP 417
Query: 504 DREQYIH 510
+ +IH
Sbjct: 418 FAKTFIH 424
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 160/353 (45%), Gaps = 47/353 (13%)
Query: 185 GYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPIL 244
G++ T +Q +LP G D ++ A+TG+GK+ +LL + QR S +
Sbjct: 95 GFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI-------NPQR-SSVQ 146
Query: 245 VLILCPTRELASQIAAEAKVLLKHHE----GIGVQSLVGGVRFKLDQKRLDSDPCQILVA 300
+I+ PTREL Q+ A++L E G V +L+ G + + L ++P ILVA
Sbjct: 147 AVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVA 206
Query: 301 TPGRLLDHVENKSGISVRLMGLQMLVLDEADHLL----DLG-FRKDIEKIVDCLPRQRQS 355
T L +E R+ +++LV+DE D L +G RK + C +RQ+
Sbjct: 207 TVASLCHMLEKH---IFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSC--DKRQT 261
Query: 356 MLFSATIPKEVRRISQLV----LKRE--HQYIDTVGMGSVETPVQIKQSFLIAPHESHFQ 409
+ SA+IP+ + + KR+ H ++ + + P+ + F++ + Q
Sbjct: 262 VFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAI----MPMPLCLLHRFVMCEKTNKHQ 317
Query: 410 IVHHILKEHILQTPDYKVIVF---------CTCGMVTSLMYQVLREMKLKVKEIHSRKPQ 460
++ +L+ P+ +I T+L+ + L+ EI +
Sbjct: 318 VLLALLES---DAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGD 374
Query: 461 L-YRTRVSD--EFKESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+ + +R + E ++ +LVS+D+++RG++ P+ T + +P Y+H
Sbjct: 375 MNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLH 427
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 172 GISPLTIKALSSAGYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIE----T 227
G+S AL +G+ + Q +P L G DV+V A+TG+GK+ +L P I+ T
Sbjct: 86 GLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTNT 145
Query: 228 VLKAMSTNTSQRVSPI--LVLILCPTRELASQIAAEAKVLLKHHEG--IGVQSLVGGVRF 283
L + TN +R P+ + LILCP L Q+ L+ + V+++ G
Sbjct: 146 ALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGS--- 202
Query: 284 KLDQKRLDSDPCQILVATPGRLLDHVENKSGISVRLM-GLQMLVLDEADHLLDLGFRKDI 342
Q D P I+V+TP LL+++E K + + ++ +V DEAD LL F+ I
Sbjct: 203 ---QGWPDRLP-DIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQI 258
Query: 343 EKIVDCL 349
++++ L
Sbjct: 259 IRLINML 265
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 149/339 (43%), Gaps = 45/339 (13%)
Query: 185 GYIHMTRVQEASLPVCLQGIDVLVKAKTGTGKSAAFLLPAIETVLKAMSTNTSQRVSPIL 244
GY Q ++ + L G ++ TG GKS + +PA+ +L ++ VSP++
Sbjct: 266 GYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAM--ILPGITL----VVSPLV 319
Query: 245 VLILCPTRELASQIAAEAKVLLKHHEGIGVQSLVGGVRFKLDQKRLDSDPCQILVATPGR 304
L++ + L S I + E ++L ++L ++L +P R
Sbjct: 320 SLMIDQLKHLPSIIKGGLLSSSQRPEE-ATETL----------RKLKEGIIKVLFVSPER 368
Query: 305 LLDHVENKSGISVRLMGLQMLVLDEADHLLDL--GFRKDIEKIVDCLPRQRQSMLFSATI 362
LL+ VE S + L + ++V+DEA + + FR ++ + SMLFS
Sbjct: 369 LLN-VEFLSMFRMSL-SVSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLFSELK 419
Query: 363 PKEVRRISQLVLKREHQYIDTVGMGSVETPV-------QIKQSFLIAPHESHFQIVHHIL 415
+ + ++ Q + M S+E P Q++ +F ++ S + +L
Sbjct: 420 AECILAMTATATTMTLQAV----MSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLL 475
Query: 416 KEHILQTPDYK----VIVFCTCGMVTSLMYQVLREMKLKVKEIHSRKPQLYRTRVSDEFK 471
++++P YK +IV+C T ++ + LR+ + K HS P R R+ + F
Sbjct: 476 I--LMESPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFC 533
Query: 472 ESKQLILVSSDVSSRGMNYPDVTLVLQVGIPPDREQYIH 510
+K ++V++ G++ DV V+ +P E+Y+
Sbjct: 534 SNKIRVVVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQ 572