Miyakogusa Predicted Gene

Lj4g3v2917570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2917570.1 Non Chatacterized Hit- tr|G7J7V6|G7J7V6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,39.42,8e-17,UNCHARACTERIZED,NULL; seg,NULL;
SNARE_assoc,SNARE associated Golgi
protein,NODE_40950_length_705_cov_63.422695.path2.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family ...   239   1e-63
AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family ...   238   2e-63
AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family ...   216   9e-57
AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family ...   209   7e-55
AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family ...   176   7e-45
AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family ...   176   7e-45
AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family ...    63   1e-10
AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family ...    55   3e-08
AT5G19070.1 | Symbols:  | SNARE associated Golgi protein family ...    51   5e-07

>AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:4244496-4245808 FORWARD LENGTH=303
          Length = 303

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 109/178 (61%), Positives = 142/178 (79%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           +LF S+ALF          MWMAG+ FGY  GF+LI+SAA++GV+LPF IG +F  K++ 
Sbjct: 108 LLFASVALFPSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQE 167

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WL+KYPKKA++LR AGEG WFHQFQA+TLIR+SPFPYI++NYCA+AT V YGPY+ GSLV
Sbjct: 168 WLKKYPKKAAILRAAGEGTWFHQFQAVTLIRVSPFPYIIYNYCALATGVHYGPYILGSLV 227

Query: 121 GMVPEVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKRR 178
           GMVPE+ VS+YTGI++RTLA AS   HT+SVV+IV+NV+G C+T +     T+YAK++
Sbjct: 228 GMVPEIFVSIYTGIMLRTLAVASDTRHTLSVVEIVVNVLGFCVTASATIVCTIYAKKK 285


>AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11995941 FORWARD LENGTH=296
          Length = 296

 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/179 (63%), Positives = 141/179 (78%), Gaps = 1/179 (0%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           ++F S+A+F          MW+AGM FGY  GF+LIISAAAVGVSLP+FIG +F  KI+G
Sbjct: 105 LVFASVAIFPTILLPSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQG 164

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WLE+YP +A+VLR AGEGNW HQF  +TLIRISPFPYIL+NYC+VAT VKYGPY+ GSL+
Sbjct: 165 WLERYPDQAAVLRAAGEGNWLHQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLL 224

Query: 121 GMVPEVLVSLYTGILIRTLANASH-KEHTISVVQIVLNVVGLCITVATVYFITVYAKRR 178
           GMVPEV V++YTGIL+RTLA AS  +E  +SV Q++LN++G   TVAT   IT YAKR+
Sbjct: 225 GMVPEVFVAIYTGILVRTLAEASSAEEQGLSVTQVILNILGFLATVATTILITKYAKRQ 283


>AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:7193527-7194942 REVERSE LENGTH=306
          Length = 306

 Score =  216 bits (549), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 102/179 (56%), Positives = 135/179 (75%), Gaps = 1/179 (0%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           ++F S++LF          MW+AG+ FGY  G +L + A A+GVSLP+FI  +F  KI+G
Sbjct: 114 LVFASVSLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQG 173

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WLE+YP +A++LR AG G+WFHQF+A+TLIRISPFP+ ++NYCAVAT VK+GPY+ GSLV
Sbjct: 174 WLERYPDQAAMLRAAGGGSWFHQFRAVTLIRISPFPFAVYNYCAVATRVKFGPYMAGSLV 233

Query: 121 GMVPEVLVSLYTGILIRTLANASHKEHT-ISVVQIVLNVVGLCITVATVYFITVYAKRR 178
           GM PE+ V++YTGILIRTLA+AS  E   +S++QIVLN+ G   TV T   IT YAKR+
Sbjct: 234 GMAPEIFVAIYTGILIRTLADASTAEQKGLSILQIVLNIFGFVATVVTTVLITKYAKRQ 292


>AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11996048 FORWARD LENGTH=277
          Length = 277

 Score =  209 bits (533), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 98/147 (66%), Positives = 118/147 (80%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           ++F S+A+F          MW+AGM FGY  GF+LIISAAAVGVSLP+FIG +F  KI+G
Sbjct: 105 LVFASVAIFPTILLPSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQG 164

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WLE+YP +A+VLR AGEGNW HQF  +TLIRISPFPYIL+NYC+VAT VKYGPY+ GSL+
Sbjct: 165 WLERYPDQAAVLRAAGEGNWLHQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLL 224

Query: 121 GMVPEVLVSLYTGILIRTLANASHKEH 147
           GMVPEV V++YTGIL+RTLA AS  E 
Sbjct: 225 GMVPEVFVAIYTGILVRTLAEASSAEE 251


>AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  176 bits (447), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 117/173 (67%)

Query: 5   SIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEGWLEK 64
           S+ALF          MW+AGM+FGY LGF++I+    +G+ LP+ IG +F  ++  WL++
Sbjct: 108 SLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKR 167

Query: 65  YPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVGMVP 124
           +P++A+VLR A EG+WFHQF+ + + R+SPFPY +FNY  V T++++ PY  GS+ GM+P
Sbjct: 168 WPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIP 227

Query: 125 EVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKR 177
           E  + +Y+G LIRT A+  +    ++ V+IV NV+ L I V T    TVYAKR
Sbjct: 228 EAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKR 280


>AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  176 bits (447), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 117/173 (67%)

Query: 5   SIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEGWLEK 64
           S+ALF          MW+AGM+FGY LGF++I+    +G+ LP+ IG +F  ++  WL++
Sbjct: 108 SLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKR 167

Query: 65  YPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVGMVP 124
           +P++A+VLR A EG+WFHQF+ + + R+SPFPY +FNY  V T++++ PY  GS+ GM+P
Sbjct: 168 WPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIP 227

Query: 125 EVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKR 177
           E  + +Y+G LIRT A+  +    ++ V+IV NV+ L I V T    TVYAKR
Sbjct: 228 EAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKR 280


>AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:795678-798102 REVERSE LENGTH=274
          Length = 274

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 24  GMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRK-IEGWLEKYPK-KASVLRFAGEGNWF 81
           G LFG  +GF+     A +G +  F +G    +  +   ++ YPK +A  +     G   
Sbjct: 77  GYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSG--- 133

Query: 82  HQFQAITLIRISP-FPYILFNYCAVATTVKYGPYLCGSLVGMVPEVLVSLYTGILIRTLA 140
             F+ + L+R+ P  P+ + NY    T V+ G Y+  + +GM+P     +Y G  ++ L+
Sbjct: 134 --FKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLS 191

Query: 141 NASHKEHTISVVQIVLNVVGLCITVATVYFITVYAK 176
           + +H  H +SV + V+ +VG+ + V  +  IT  AK
Sbjct: 192 DITHGWHEVSVFRWVIMMVGVALAVILIICITRVAK 227


>AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:8080671-8082816 REVERSE LENGTH=344
          Length = 344

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 6/104 (5%)

Query: 23  AGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHR-KIEGWLEKYPKKASVLRFAGEGNWF 81
           AG+LFG ++G +++  +  +  S+ F I   F R +I   +E   K  ++ +  GE    
Sbjct: 177 AGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGE---- 232

Query: 82  HQFQAITLIRISPF-PYILFNYCAVATTVKYGPYLCGSLVGMVP 124
           + F+ +TL+R+SP  P+ L NY    T+VK+ PY+ GS +GM+P
Sbjct: 233 NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLP 276


>AT5G19070.1 | Symbols:  | SNARE associated Golgi protein family |
           chr5:6375569-6377470 FORWARD LENGTH=280
          Length = 280

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 24  GMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRK-IEGWLEKYPKKASVLRFAGEGNWFH 82
           G LFG  +GF+     A +G    F +G    +  +   L+ YP+  SV   A E + F 
Sbjct: 75  GYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSV-ALAIEKSGFK 133

Query: 83  QFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVGMVPEVLVSLYTGILIRTLANA 142
               + L  + PF   + NY    T ++ GPYL  S +GM+P  L  +Y G  ++ L++ 
Sbjct: 134 ICLLLRLAPLLPFS--MLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDV 191

Query: 143 SHKEHTISVVQIVLNVVGLCITVATVYFITVYAKR 177
           +HK    S  +    +  L I+V  +  +T  AK 
Sbjct: 192 THKWSEFSPGRWAFLISSLVISVILMVCVTKVAKD 226