Miyakogusa Predicted Gene
- Lj4g3v2883290.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2883290.2 Non Chatacterized Hit- tr|I3SZ06|I3SZ06_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,2e-17,Rad60-SLD_2,NULL; no description,NULL;
Ubiquitin-like,NULL,CUFF.51891.2
(109 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein | chr4:1... 191 1e-49
AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold p... 146 3e-36
AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold p... 110 2e-25
AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold p... 108 7e-25
AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p... 100 3e-22
AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p... 100 3e-22
AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold p... 94 2e-20
>AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein |
chr4:12849973-12851249 REVERSE LENGTH=118
Length = 118
Score = 191 bits (484), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 100/109 (91%), Gaps = 1/109 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEE+ +DIKFRLYDGSDIGPFRYS+A+TVD LKQRVVSDWPKGKTV+PK NEVKLISS
Sbjct: 1 MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPK 108
GKILENNKTVGQCK PFG+ AGGVI MHVVVQPSLAKSK EKKVD +PK
Sbjct: 61 GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPK 109
>AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold
protein 4 precursor | chr3:9946467-9947444 REVERSE
LENGTH=120
Length = 120
Score = 146 bits (368), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLV++KFRLYDGSD+GPF+YS ATV MLK+R+VS+WPK K ++PKSA+++KLI++
Sbjct: 1 MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60
Query: 61 GKILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVD 104
GKILEN KTV QCK PF + VI MHVVVQ S K++ EKK++
Sbjct: 61 GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIE 105
>AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold
protein 5 precursor | chr1:29285177-29285714 FORWARD
LENGTH=120
Length = 120
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
M +EDL+++KFRL DG+DIGP +YS TV LK+++++ WPK K PK NEVKLI+
Sbjct: 1 MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60
Query: 61 GKILENNKTVGQCK--VPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKK 109
GKILENNKT+ + + + GE G V MHVV++P L + K EK +D P+K
Sbjct: 61 GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRK 112
>AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold
protein 6 precursor | chr1:7771897-7772843 FORWARD
LENGTH=119
Length = 119
Score = 108 bits (270), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 81/109 (74%), Gaps = 3/109 (2%)
Query: 3 EEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGK 62
EED +++KFRL DG+DIGP +Y+ + TV LK++++S WPK K PK+ N++KLI++GK
Sbjct: 4 EEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGK 63
Query: 63 ILENNKTVGQCKVPFGETAGGVI-MHVVVQ-PSLAKSKAEKKVDDSPKK 109
ILENN+T+ + ++P E G +I MH+V++ P+L K K+EK +D P K
Sbjct: 64 ILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDK-KSEKLQNDPPMK 111
>AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
Length = 124
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DGSDIGP + A TV LK+ VV+ WP+ K PK+ +VKLIS+G+I
Sbjct: 5 KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQ 91
LENNKTVG C+ P G +G V MHV++Q
Sbjct: 65 LENNKTVGDCRSPVGNFSGAVTTMHVIIQ 93
>AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
Length = 124
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DGSDIGP + A TV LK+ VV+ WP+ K PK+ +VKLIS+G+I
Sbjct: 5 KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQ 91
LENNKTVG C+ P G +G V MHV++Q
Sbjct: 65 LENNKTVGDCRSPVGNFSGAVTTMHVIIQ 93
>AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold
protein 1 precursor | chr3:13854-14675 FORWARD
LENGTH=117
Length = 117
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 7 VDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKILEN 66
++IKFRL DGSDIGP + A TV LK+ V+S+WP+ K PK+ EVKLIS+GK+LEN
Sbjct: 8 LEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLEN 67
Query: 67 NKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPK 108
+KTV + P AG V MHV++Q + ++ EKK PK
Sbjct: 68 SKTVKDYRSPVSNLAGAVTTMHVIIQAPV--TEKEKKPKGDPK 108