Miyakogusa Predicted Gene

Lj4g3v2883290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2883290.1 Non Chatacterized Hit- tr|I3SSW2|I3SSW2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0,UBIQUITIN_2,Ubiquitin supergroup; Rad60-SLD_2,NULL;
UBIQUITIN-LIKE PROTEIN 3 (HCG-1 PROTEIN),NULL; U,CUFF.51891.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein | chr4:1...   204   8e-54
AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold p...   157   2e-39
AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold p...   119   5e-28
AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold p...   117   2e-27
AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold p...   101   8e-23
AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p...   100   1e-22
AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p...   100   1e-22

>AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein |
           chr4:12849973-12851249 REVERSE LENGTH=118
          Length = 118

 Score =  204 bits (520), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 98/118 (83%), Positives = 108/118 (91%), Gaps = 1/118 (0%)

Query: 1   MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
           MPEE+ +DIKFRLYDGSDIGPFRYS+A+TVD LKQRVVSDWPKGKTV+PK  NEVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
           GKILENNKTVGQCK PFG+ AGGVI MHVVVQPSLAKSK EKKVD +PK V+C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118


>AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold
           protein 4 precursor | chr3:9946467-9947444 REVERSE
           LENGTH=120
          Length = 120

 Score =  157 bits (396), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/120 (60%), Positives = 98/120 (81%), Gaps = 3/120 (2%)

Query: 1   MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
           MPEEDLV++KFRLYDGSD+GPF+YS  ATV MLK+R+VS+WPK K ++PKSA+++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKV--DDSPKKVVCSCSIL 117
           GKILEN KTV QCK PF +    VI MHVVVQ S  K++ EKK+  +++P++  CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120


>AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold
           protein 5 precursor | chr1:29285177-29285714 FORWARD
           LENGTH=120
          Length = 120

 Score =  119 bits (297), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 82/120 (68%), Gaps = 3/120 (2%)

Query: 1   MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
           M +EDL+++KFRL DG+DIGP +YS   TV  LK+++++ WPK K   PK  NEVKLI+ 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCK--VPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
           GKILENNKT+ + +  +  GE  G V  MHVV++P L + K EK  +D P+K  C C IL
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120


>AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold
           protein 6 precursor | chr1:7771897-7772843 FORWARD
           LENGTH=119
          Length = 119

 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 82/116 (70%), Gaps = 1/116 (0%)

Query: 3   EEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGK 62
           EED +++KFRL DG+DIGP +Y+ + TV  LK++++S WPK K   PK+ N++KLI++GK
Sbjct: 4   EEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGK 63

Query: 63  ILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
           ILENN+T+ + ++P  E  G +I MH+V++      K+EK  +D P K  C C+IL
Sbjct: 64  ILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119


>AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold
           protein 1 precursor | chr3:13854-14675 FORWARD
           LENGTH=117
          Length = 117

 Score =  101 bits (252), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 3/115 (2%)

Query: 4   EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
            + ++IKFRL DGSDIGP  +  A TV  LK+ V+S+WP+ K   PK+  EVKLIS+GK+
Sbjct: 5   HNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKV 64

Query: 64  LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
           LEN+KTV   + P    AG V  MHV++Q  +  ++ EKK    PK   C CS++
Sbjct: 65  LENSKTVKDYRSPVSNLAGAVTTMHVIIQAPV--TEKEKKPKGDPKMNKCVCSVM 117


>AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
           protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
          Length = 124

 Score =  100 bits (250), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 75/115 (65%), Gaps = 4/115 (3%)

Query: 4   EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
           +D ++IKFRL DGSDIGP  +  A TV  LK+ VV+ WP+ K   PK+  +VKLIS+G+I
Sbjct: 5   KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64

Query: 64  LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKV---DDSPKKVVCSC 114
           LENNKTVG C+ P G  +G V  MHV++Q  + + + +KK    D    K VC C
Sbjct: 65  LENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119


>AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
           protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
          Length = 124

 Score =  100 bits (250), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 75/115 (65%), Gaps = 4/115 (3%)

Query: 4   EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
           +D ++IKFRL DGSDIGP  +  A TV  LK+ VV+ WP+ K   PK+  +VKLIS+G+I
Sbjct: 5   KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64

Query: 64  LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKV---DDSPKKVVCSC 114
           LENNKTVG C+ P G  +G V  MHV++Q  + + + +KK    D    K VC C
Sbjct: 65  LENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119