Miyakogusa Predicted Gene

Lj4g3v2882140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882140.1 Non Chatacterized Hit- tr|F6GTF0|F6GTF0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.74,3e-17,STERILE ALPHA MOTIF (SAM) DOMAIN-CONTAINING
PROTEIN,NULL; SCP160,NULL; Sterile alpha motif.,Sterile ,CUFF.51821.1
         (308 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48800.1 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   180   1e-45
AT5G23680.1 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   164   9e-41

>AT3G48800.1 | Symbols:  | Sterile alpha motif (SAM)
           domain-containing protein | chr3:18095825-18096661
           REVERSE LENGTH=278
          Length = 278

 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 175/318 (55%), Gaps = 50/318 (15%)

Query: 1   MAEIHAAEGQLNGAGNLILNS--------LEPIGTKRQRRPSVRLGDIGGDQPHESHHRR 52
           MAE+   +GQ    G + + +        +   G+KR RRPSVRLG+IGGDQ  + HH  
Sbjct: 1   MAELQPVDGQQTNGGVVTIPASTSAEATAIAAAGSKRLRRPSVRLGEIGGDQYQQQHHHH 60

Query: 53  STSSKGWKLGFDHRKEKDSTAANPSSGNKPSKTRPLTNLTSVADFNETLDGDEREGNNID 112
           + ++     G   +    +T+ N    +K S+TR LTNL+S  +   TLD DEREGN +D
Sbjct: 61  AAAAAYDSQGRKSKWTPTTTSGNRKDTSKSSRTRTLTNLSSGYENIGTLD-DEREGN-VD 118

Query: 113 SVAIGSWKVKE--SKKRATKRVRSSWVSRIXXXXXXXXXXXXXXXXXXXXXXXXXXYREF 170
           S  +GSW+VK+      A KRVRS+WVS++                          +R+F
Sbjct: 119 SFGVGSWRVKKRVGSSAAAKRVRSNWVSKVGDGDEKISGGEELEGG----------FRDF 168

Query: 171 DMENSDSLLKEQSPIQSMENLGVDGHRRSFKGSRDHHDGIELSGPSDTDARDWKCGGTSG 230
             E+S+S +KE+S       L  DG    F G R +                    G   
Sbjct: 169 SREDSESPIKEES-------LDRDGG--GFYGRRRYESN--------------NSSGNRE 205

Query: 231 GDRNENGGGRVRSGEDGVRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAV 290
            + N +GGG+     +GV+IWL  LGLGRY P+FE+HEVD+EVLP+LTLEDLKDMGI+AV
Sbjct: 206 FESNMDGGGK-----EGVKIWLQELGLGRYWPMFEIHEVDEEVLPLLTLEDLKDMGINAV 260

Query: 291 GSRRKMYCAIQKLGKGFS 308
           GSRRKM+CAIQKLG+ FS
Sbjct: 261 GSRRKMFCAIQKLGREFS 278


>AT5G23680.1 | Symbols:  | Sterile alpha motif (SAM)
           domain-containing protein | chr5:7985573-7986460 REVERSE
           LENGTH=295
          Length = 295

 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 173/347 (49%), Gaps = 91/347 (26%)

Query: 1   MAEIHAAEG-QLNGA--GNLILNSLEP----------IGTKRQRRPSVRLGDIGGDQPHE 47
           MAE+   EG Q+NG      I+NS+E           +G+KR RRPSVRLGDIGGDQ H+
Sbjct: 1   MAELQLVEGHQINGGFIPPAIINSIEAPETSAAAGVSVGSKRLRRPSVRLGDIGGDQYHQ 60

Query: 48  ----SHHRRSTSSKGWK------LGFDHRKEKDSTAANPSSGNKPSKTRPLTNLTSVADF 97
               ++         W+       G  +RKE ++ +   +S    S+TR +TNL+S   +
Sbjct: 61  HVVAAYDSPQVRRPKWRPSGGGGGGGGNRKEPNNQSGKTTSS---SRTRTMTNLSS-GGY 116

Query: 98  NETLDGDEREGNNIDSVAIGSWKVKESKKRA--------------TKRVRSSWVSRIXXX 143
             T   DE      D V+IGSW+VK+  K +               KRVRS+W +R    
Sbjct: 117 ENTGTLDE------DPVSIGSWRVKKWVKSSGGETAATTTTNTASAKRVRSNWATRNDGV 170

Query: 144 XX--XXXXXXXXXXXXXXXXXXXXXYREFDMENSDSLLKEQSPIQSMENLGVDGHRRSFK 201
                                    +R+F  E+S+S +KE+   ++ E            
Sbjct: 171 EQGDEKFSGEEEEEEEDEELGGEEGFRDFSREDSESPMKERRRYENRE------------ 218

Query: 202 GSRDHHDGIELSGPSDTDARDWKCGGTSGGDRNENGGGRVRSGEDGVRIWLNGLGLGRYA 261
                   +EL G       DW+ GG                G++GV+IWL  LGLGRY 
Sbjct: 219 --------VELLG-------DWQSGG---------------RGKEGVKIWLQELGLGRYW 248

Query: 262 PVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS 308
           P+FE+HEVD++VLP+LTLEDLKDMGI+AVGSRRKMYCAIQKLG+ FS
Sbjct: 249 PMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAIQKLGREFS 295