Miyakogusa Predicted Gene
- Lj4g3v2881950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2881950.1 Non Chatacterized Hit- tr|I1K6T1|I1K6T1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51850 PE,75.32,0,CAD &
PB1 domains,NULL; AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT NAMED,,CUFF.51836.1
(459 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 385 e-107
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 385 e-107
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 385 e-107
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 376 e-104
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 129 4e-30
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 129 4e-30
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 129 4e-30
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 129 4e-30
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 127 1e-29
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 127 1e-29
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 123 2e-28
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 123 3e-28
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 122 4e-28
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 122 5e-28
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 121 8e-28
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 115 6e-26
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 115 7e-26
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 113 3e-25
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 105 5e-23
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 103 2e-22
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 102 7e-22
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 101 9e-22
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 96 6e-20
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 92 7e-19
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 92 7e-19
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 92 8e-19
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 91 2e-18
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 90 4e-18
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 90 4e-18
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 83 4e-16
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 73 4e-13
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 67 2e-11
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 64 3e-10
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 63 4e-10
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 62 1e-09
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 62 1e-09
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 61 1e-09
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 61 1e-09
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 61 2e-09
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 61 2e-09
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 58 1e-08
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 57 3e-08
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 1e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 55 1e-07
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 55 1e-07
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 54 3e-07
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 54 3e-07
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 54 3e-07
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 53 4e-07
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 52 9e-07
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 51 1e-06
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 51 2e-06
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 50 2e-06
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 50 3e-06
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 50 3e-06
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 50 4e-06
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 49 8e-06
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/465 (46%), Positives = 292/465 (62%), Gaps = 35/465 (7%)
Query: 1 MNPLIMPRPKRPRSNVVPSSPDSSILTREASSKVNADPLPASGFPRVLQGQESSTLRGNF 60
++P+ MPRPKRPRSN+ PSSPDSS+LTRE ++K N DPLPASG RVLQGQE STLR
Sbjct: 401 LSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKH 460
Query: 61 AESIESNTAEKSVPWPRAADDEKIDAASTSRRYGSESWMLMARQEPTYSDLLSGFGARVD 120
ES+E + E SV W +ADD+K+D S SRRYGSE+WM AR EPTY+DLLSGFG +D
Sbjct: 461 TESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNID 520
Query: 121 --HSSHPSFVNQTGTVANTGRKSLIHREGKHNALT-PWTGMPSSLSLNISDS-KTKGSTL 176
H F + + + + ++ L EGK + L W + S LSL + +S K +T
Sbjct: 521 PSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHESPKVPAAT- 579
Query: 177 GSDVAYQVQGNSRYSAFGEYHVLHGHKVEHPHGNFLMKQPVPTQYE-------SPHSKEL 229
D + Q + N +YS EY VL+G E+ GN+ ++ YE ++E
Sbjct: 580 --DASLQGRCNVKYS---EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQ 634
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSSSIVPEPAT-SQRDVESEPVSHMNITLQQHRT 288
+ +Q AK ++G+C+LFGI L++++ +T SQR+ ++ I + +
Sbjct: 635 VTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQD 694
Query: 289 FENDQKSGHTRGTKPADGQVVADDHES----LQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
+ K G +DH QT+ P KD Q + + S+RSCTKVHK+
Sbjct: 695 LSDQSK-----------GSKSTNDHREQGRPFQTNNPHPKDAQ--TKTNSSRSCTKVHKQ 741
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQ 404
GIALGRSVDLSKF +Y+EL+AELD+LFEF GEL +P KDWL+VYTD E DMMLVGDDPWQ
Sbjct: 742 GIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQ 801
Query: 405 EFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQEIK 449
EFC MVRKI+IY KEE++KM+PGTLS ++EE EG+DA++ K
Sbjct: 802 EFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAK 846
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/465 (46%), Positives = 292/465 (62%), Gaps = 35/465 (7%)
Query: 1 MNPLIMPRPKRPRSNVVPSSPDSSILTREASSKVNADPLPASGFPRVLQGQESSTLRGNF 60
++P+ MPRPKRPRSN+ PSSPDSS+LTRE ++K N DPLPASG RVLQGQE STLR
Sbjct: 401 LSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKH 460
Query: 61 AESIESNTAEKSVPWPRAADDEKIDAASTSRRYGSESWMLMARQEPTYSDLLSGFGARVD 120
ES+E + E SV W +ADD+K+D S SRRYGSE+WM AR EPTY+DLLSGFG +D
Sbjct: 461 TESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNID 520
Query: 121 --HSSHPSFVNQTGTVANTGRKSLIHREGKHNALT-PWTGMPSSLSLNISDS-KTKGSTL 176
H F + + + + ++ L EGK + L W + S LSL + +S K +T
Sbjct: 521 PSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHESPKVPAAT- 579
Query: 177 GSDVAYQVQGNSRYSAFGEYHVLHGHKVEHPHGNFLMKQPVPTQYE-------SPHSKEL 229
D + Q + N +YS EY VL+G E+ GN+ ++ YE ++E
Sbjct: 580 --DASLQGRCNVKYS---EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQ 634
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSSSIVPEPAT-SQRDVESEPVSHMNITLQQHRT 288
+ +Q AK ++G+C+LFGI L++++ +T SQR+ ++ I + +
Sbjct: 635 VTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQD 694
Query: 289 FENDQKSGHTRGTKPADGQVVADDHES----LQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
+ K G +DH QT+ P KD Q + + S+RSCTKVHK+
Sbjct: 695 LSDQSK-----------GSKSTNDHREQGRPFQTNNPHPKDAQ--TKTNSSRSCTKVHKQ 741
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQ 404
GIALGRSVDLSKF +Y+EL+AELD+LFEF GEL +P KDWL+VYTD E DMMLVGDDPWQ
Sbjct: 742 GIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQ 801
Query: 405 EFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQEIK 449
EFC MVRKI+IY KEE++KM+PGTLS ++EE EG+DA++ K
Sbjct: 802 EFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAK 846
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/465 (46%), Positives = 292/465 (62%), Gaps = 35/465 (7%)
Query: 1 MNPLIMPRPKRPRSNVVPSSPDSSILTREASSKVNADPLPASGFPRVLQGQESSTLRGNF 60
++P+ MPRPKRPRSN+ PSSPDSS+LTRE ++K N DPLPASG RVLQGQE STLR
Sbjct: 401 LSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKH 460
Query: 61 AESIESNTAEKSVPWPRAADDEKIDAASTSRRYGSESWMLMARQEPTYSDLLSGFGARVD 120
ES+E + E SV W +ADD+K+D S SRRYGSE+WM AR EPTY+DLLSGFG +D
Sbjct: 461 TESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNID 520
Query: 121 --HSSHPSFVNQTGTVANTGRKSLIHREGKHNALT-PWTGMPSSLSLNISDS-KTKGSTL 176
H F + + + + ++ L EGK + L W + S LSL + +S K +T
Sbjct: 521 PSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHESPKVPAAT- 579
Query: 177 GSDVAYQVQGNSRYSAFGEYHVLHGHKVEHPHGNFLMKQPVPTQYE-------SPHSKEL 229
D + Q + N +YS EY VL+G E+ GN+ ++ YE ++E
Sbjct: 580 --DASLQGRCNVKYS---EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQ 634
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSSSIVPEPAT-SQRDVESEPVSHMNITLQQHRT 288
+ +Q AK ++G+C+LFGI L++++ +T SQR+ ++ I + +
Sbjct: 635 VTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQD 694
Query: 289 FENDQKSGHTRGTKPADGQVVADDHES----LQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
+ K G +DH QT+ P KD Q + + S+RSCTKVHK+
Sbjct: 695 LSDQSK-----------GSKSTNDHREQGRPFQTNNPHPKDAQ--TKTNSSRSCTKVHKQ 741
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQ 404
GIALGRSVDLSKF +Y+EL+AELD+LFEF GEL +P KDWL+VYTD E DMMLVGDDPWQ
Sbjct: 742 GIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQ 801
Query: 405 EFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQEIK 449
EFC MVRKI+IY KEE++KM+PGTLS ++EE EG+DA++ K
Sbjct: 802 EFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAK 846
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 284/451 (62%), Gaps = 35/451 (7%)
Query: 1 MNPLIMPRPKRPRSNVVPSSPDSSILTREASSKVNADPLPASGFPRVLQGQESSTLRGNF 60
++P+ MPRPKRPRSN+ PSSPDSS+LTRE ++K N DPLPASG RVLQGQE STLR
Sbjct: 401 LSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKH 460
Query: 61 AESIESNTAEKSVPWPRAADDEKIDAASTSRRYGSESWMLMARQEPTYSDLLSGFGARVD 120
ES+E + E SV W +ADD+K+D S SRRYGSE+WM AR EPTY+DLLSGFG +D
Sbjct: 461 TESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNID 520
Query: 121 --HSSHPSFVNQTGTVANTGRKSLIHREGKHNALT-PWTGMPSSLSLNISDS-KTKGSTL 176
H F + + + + ++ L EGK + L W + S LSL + +S K +T
Sbjct: 521 PSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHESPKVPAAT- 579
Query: 177 GSDVAYQVQGNSRYSAFGEYHVLHGHKVEHPHGNFLMKQPVPTQYE-------SPHSKEL 229
D + Q + N +YS EY VL+G E+ GN+ ++ YE ++E
Sbjct: 580 --DASLQGRCNVKYS---EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQ 634
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSSSIVPEPAT-SQRDVESEPVSHMNITLQQHRT 288
+ +Q AK ++G+C+LFGI L++++ +T SQR+ ++ I + +
Sbjct: 635 VTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQD 694
Query: 289 FENDQKSGHTRGTKPADGQVVADDHES----LQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
+ K G +DH QT+ P KD Q + + S+RSCTKVHK+
Sbjct: 695 LSDQSK-----------GSKSTNDHREQGRPFQTNNPHPKDAQ--TKTNSSRSCTKVHKQ 741
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQ 404
GIALGRSVDLSKF +Y+EL+AELD+LFEF GEL +P KDWL+VYTD E DMMLVGDDPWQ
Sbjct: 742 GIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQ 801
Query: 405 EFCAMVRKIYIYPKEEIQKMSPGTLSSKNEE 435
EFC MVRKI+IY KEE++KM+PGTLS ++EE
Sbjct: 802 EFCCMVRKIFIYTKEEVRKMNPGTLSCRSEE 832
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 35/233 (15%)
Query: 247 GDCKLFGISLSSSIVPEPA---------------TSQRDVESEPVSHMNITLQQHRTFEN 291
G K FG+S+ S+ P A T ++ L ++ +
Sbjct: 421 GGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE 480
Query: 292 DQKSGHTRGTKPADGQVVADDHESLQTSQPL-VKDVQLNSHSG----------------S 334
+ G D V +++ +S Q S+PL + + S SG
Sbjct: 481 CFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQ 540
Query: 335 ARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGD 394
RSCTKVH +G A+GR++DL++ Y++L +L+++F+ GEL K W VVYTD+E D
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDD 600
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQE 447
MM+VGDDPW EFC MVRKI+IY EE++K+SP +K N ADA+E
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSP---KNKLAVNARMQLKADAEE 650
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 35/233 (15%)
Query: 247 GDCKLFGISLSSSIVPEPA---------------TSQRDVESEPVSHMNITLQQHRTFEN 291
G K FG+S+ S+ P A T ++ L ++ +
Sbjct: 421 GGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE 480
Query: 292 DQKSGHTRGTKPADGQVVADDHESLQTSQPL-VKDVQLNSHSG----------------S 334
+ G D V +++ +S Q S+PL + + S SG
Sbjct: 481 CFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQ 540
Query: 335 ARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGD 394
RSCTKVH +G A+GR++DL++ Y++L +L+++F+ GEL K W VVYTD+E D
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDD 600
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQE 447
MM+VGDDPW EFC MVRKI+IY EE++K+SP +K N ADA+E
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSP---KNKLAVNARMQLKADAEE 650
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 35/233 (15%)
Query: 247 GDCKLFGISLSSSIVPEPA---------------TSQRDVESEPVSHMNITLQQHRTFEN 291
G K FG+S+ S+ P A T ++ L ++ +
Sbjct: 418 GGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE 477
Query: 292 DQKSGHTRGTKPADGQVVADDHESLQTSQPL-VKDVQLNSHSG----------------S 334
+ G D V +++ +S Q S+PL + + S SG
Sbjct: 478 CFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQ 537
Query: 335 ARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGD 394
RSCTKVH +G A+GR++DL++ Y++L +L+++F+ GEL K W VVYTD+E D
Sbjct: 538 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDD 597
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQE 447
MM+VGDDPW EFC MVRKI+IY EE++K+SP +K N ADA+E
Sbjct: 598 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSP---KNKLAVNARMQLKADAEE 647
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 116/233 (49%), Gaps = 35/233 (15%)
Query: 247 GDCKLFGISLSSSIVPEPA---------------TSQRDVESEPVSHMNITLQQHRTFEN 291
G K FG+S+ S+ P A T ++ L ++ +
Sbjct: 416 GGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE 475
Query: 292 DQKSGHTRGTKPADGQVVADDHESLQTSQPL-VKDVQLNSHSG----------------S 334
+ G D V +++ +S Q S+PL + + S SG
Sbjct: 476 CFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQ 535
Query: 335 ARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGD 394
RSCTKVH +G A+GR++DL++ Y++L +L+++F+ GEL K W VVYTD+E D
Sbjct: 536 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDD 595
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGADAQE 447
MM+VGDDPW EFC MVRKI+IY EE++K+SP +K N ADA+E
Sbjct: 596 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSP---KNKLAVNARMQLKADAEE 645
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 30/187 (16%)
Query: 247 GDCKLFGISLSSS--IVPEPATSQRDVESEPVSHMNI---TLQQHRTFEND-QKSGHTRG 300
+ +LFGI L SS VPE T+ P+ +NI T+ H +++ K +
Sbjct: 449 ANYRLFGIDLMSSSLAVPEEKTA-------PMRPINISKPTMDSHSDPKSEISKVSEEKK 501
Query: 301 TKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDY 360
+PA+G K+VQ + S S RS TKV +G+ +GR+VDL+ Y
Sbjct: 502 QEPAEGSP---------------KEVQ-SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGY 545
Query: 361 DELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEE 420
+ELI ++++LF+ GEL S ++ W +V+TD+EGDMMLVGDDPW EFC MV++I+I+ KEE
Sbjct: 546 NELIDDIEKLFDIKGELRSRNQ-WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEE 604
Query: 421 IQKMSPG 427
++KM+PG
Sbjct: 605 VKKMTPG 611
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 30/187 (16%)
Query: 247 GDCKLFGISLSSS--IVPEPATSQRDVESEPVSHMNI---TLQQHRTFEND-QKSGHTRG 300
+ +LFGI L SS VPE T+ P+ +NI T+ H +++ K +
Sbjct: 451 ANYRLFGIDLMSSSLAVPEEKTA-------PMRPINISKPTMDSHSDPKSEISKVSEEKK 503
Query: 301 TKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDY 360
+PA+G K+VQ + S S RS TKV +G+ +GR+VDL+ Y
Sbjct: 504 QEPAEGSP---------------KEVQ-SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGY 547
Query: 361 DELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEE 420
+ELI ++++LF+ GEL S ++ W +V+TD+EGDMMLVGDDPW EFC MV++I+I+ KEE
Sbjct: 548 NELIDDIEKLFDIKGELRSRNQ-WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEE 606
Query: 421 IQKMSPG 427
++KM+PG
Sbjct: 607 VKKMTPG 613
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 6/148 (4%)
Query: 287 RTFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNS-----HSGSARSCTKV 341
R F D S T P D Q+++ D ++ NS S RS KV
Sbjct: 349 RLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKV 408
Query: 342 HKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDD 401
+G A+GR+VDL+ YDELI EL+++FE GEL SP W +V+TD+EGD MLVGDD
Sbjct: 409 QMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDD 467
Query: 402 PWQEFCAMVRKIYIYPKEEIQKMSPGTL 429
PW EFC M +K++IYP +E++KM +L
Sbjct: 468 PWNEFCKMAKKLFIYPSDEVKKMRSKSL 495
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 6/148 (4%)
Query: 287 RTFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNS-----HSGSARSCTKV 341
R F D S T P D Q+++ D ++ NS S RS KV
Sbjct: 436 RLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKV 495
Query: 342 HKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDD 401
+G A+GR+VDL+ YDELI EL+++FE GEL SP W +V+TD+EGD MLVGDD
Sbjct: 496 QMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDD 554
Query: 402 PWQEFCAMVRKIYIYPKEEIQKMSPGTL 429
PW EFC M +K++IYP +E++KM +L
Sbjct: 555 PWNEFCKMAKKLFIYPSDEVKKMRSKSL 582
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 86/148 (58%), Gaps = 6/148 (4%)
Query: 287 RTFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNS-----HSGSARSCTKV 341
R F D S T P D Q+++ D ++ NS S RS KV
Sbjct: 457 RLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKV 516
Query: 342 HKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDD 401
+G A+GR+VDL+ YDELI EL+++FE GEL SP W +V+TD+EGD MLVGDD
Sbjct: 517 QMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDD 575
Query: 402 PWQEFCAMVRKIYIYPKEEIQKMSPGTL 429
PW EFC M +K++IYP +E++KM +L
Sbjct: 576 PWNEFCKMAKKLFIYPSDEVKKMRSKSL 603
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 334 SARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEG 393
++RS TKV +GIA+GR+VDL+ YDELI EL+++FE G+L + K W+VV+TD+EG
Sbjct: 487 TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK-WIVVFTDDEG 545
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENH 437
DMML GDDPW EFC M +KI+IY +E++KM+ S + EN
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLENE 589
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Query: 331 HSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTD 390
S S R CTKVHK+G +GR++DLS+ N YD+L+ EL++LF G L P K W ++YTD
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTD 719
Query: 391 NEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHSASEGA 443
+E DMM+VGDDPW +FC +V KI++Y KEE++ + N++N S E A
Sbjct: 720 SENDMMVVGDDPWHDFCNVVWKIHLYTKEEVE--------NANDDNKSCLEQA 764
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 319 SQPLVKDVQLNSHS-GSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGEL 377
SQ L +++ S GS R+CTKV +G+ +GR+VDLS N YD+LI EL++LF+ G+L
Sbjct: 477 SQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL 536
Query: 378 TSPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQ 422
+ ++ W + +TD++G MLVGDDPW EFC MV+KI IY KEE++
Sbjct: 537 QTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
Query: 334 SARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEG 393
S R+CTKV +G+ +GR+VDLS N YD+LI EL++LF+ G+L + ++ W + +T+NE
Sbjct: 508 STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQ-WEIAFTNNEE 566
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM-SPGTLSS 431
D MLVG+DPW EFC MV+KI+IY KEE++ + S +LSS
Sbjct: 567 DKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSLSS 605
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 319 SQPLVKDVQLNSHS-GSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGEL 377
SQ L +++ S S+R+CTKV +G+ +GR+VDLS N YD+LI EL++LF+ G+L
Sbjct: 493 SQTLRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL 552
Query: 378 TSPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQ 422
+ ++ W + +TD++G MLVGDDPW EFC MV+KI IY KEE++
Sbjct: 553 QTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 329 NSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVY 388
N S+R+CTKV +G+ +GR+VDLS N YD+LI EL++LF+ G+L + ++ W + +
Sbjct: 504 NKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ-WEIAF 562
Query: 389 TDNEGDMMLVGDDPWQEFCAMVRKIYI 415
TD++ D MLVGDDPW EFC MV+KI+I
Sbjct: 563 TDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 334 SARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEG 393
S R+CTKV +G+ +GR+VDLS N YD+LI EL++LF+ G+L + ++ W +++T ++
Sbjct: 514 STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ-WKIIFTGSDE 572
Query: 394 DMMLVGDDPWQEFCAMVRKIYI 415
D MLVGDDPW EFC MV++IYI
Sbjct: 573 DEMLVGDDPWPEFCNMVKRIYI 594
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 334 SARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEG 393
S R+CTKV +G+ + R+VDLS N YD+LI EL++LF+ G+L + ++ W + +TD++
Sbjct: 507 STRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQ-WEIAFTDSDD 565
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPK 418
D MLVGDDPW EFC MV+KI I+ +
Sbjct: 566 DKMLVGDDPWPEFCNMVKKILIFKR 590
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
Query: 311 DDHESLQTSQPLVKDVQLNSHSGS---ARSCTKVHKKGIALGRSVDLSKFNDYDELIAEL 367
+++ S Q QP +D+ + + TKVH +G+A+ R+VDL+ + Y++LI +L
Sbjct: 405 ENYNSDQMIQPRKEDITTEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKL 464
Query: 368 DQLFEFGGELTSPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 424
++LF+ EL + ++ W +V+T+NEG MLVGDDPW EFC M ++I+I KEEI+KM
Sbjct: 465 EELFDLKDELRTRNQ-WEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 336 RSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSP-HKDWLVVYTDNEGD 394
R+ TKV K+G ++GRS+D+++++ YDEL +L ++F G+L P DW +VYTD+E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS-PGTLSSKNEENHSASE 441
++LVGDDPW+EF V+ I I E+Q+MS G L++ N + SE
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGDLAAIPTTNQACSE 1064
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 336 RSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPH-KDWLVVYTDNEGD 394
R+ TKV K+G ++GRS+D++++ YDEL +L ++F G+L P DW +VY D+E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS-PGTLSSKNEENHSASEG 442
++LVGDDPW+EF V+ I I E+Q+MS G + N + S G
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGG 1144
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 336 RSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPH-KDWLVVYTDNEGD 394
R+ TKV K+G ++GRS+D++++ YDEL +L ++F G+L P DW +VY D+E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS-PGTLSSKNEENHSASEG 442
++LVGDDPW+EF V+ I I E+Q+MS G + N + S G
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGG 1145
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 336 RSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPH-KDWLVVYTDNEGD 394
R+ TKV K+G ++GRS+D++++ YDEL +L ++F G+L P DW +VY D+E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 395 MMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS 425
++LVGDDPW+EF V+ I I E+Q+MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 335 ARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKD-WLVVYTDNEG 393
R+ TKV K G ++GRS+D++ F DY+EL + ++ +F G LT P W +VY D E
Sbjct: 792 VRTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYES 850
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS 425
D++LVGDDPW+EF VR I I E+Q+MS
Sbjct: 851 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 882
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 251 LFGISLSSS--IVPEPATSQRDVESEPVSHMNITLQQHRTFENDQKSGHTRGTKPADGQV 308
LFG+++ SS ++P ++ R + E + F ND SG+ T P+
Sbjct: 720 LFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTS-SNFNND-FSGNLAMTTPSS--- 774
Query: 309 VADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELD 368
D+ LQ+S+ L S + + + KV+K G + GRS+D+SKF+ Y EL +EL
Sbjct: 775 CIDESGFLQSSE------NLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELA 827
Query: 369 QLFEFGGELTSPHKD-WLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 424
++F G+L P + W +V+ D E D++L+GDDPW EF + V I I +E+Q+M
Sbjct: 828 RMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 884
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 251 LFGISLSSS--IVPEPATSQRDVESEPVSHMNITLQQHRTFENDQKSGHTRGTKPADGQV 308
LFG+++ SS ++P ++ R + E + F ND SG+ T P+
Sbjct: 718 LFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTS-SNFNND-FSGNLAMTTPSS--- 772
Query: 309 VADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELD 368
D+ LQ+S+ L S + + + KV+K G + GRS+D+SKF+ Y EL +EL
Sbjct: 773 CIDESGFLQSSE------NLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELA 825
Query: 369 QLFEFGGELTSPHKD-WLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 424
++F G+L P + W +V+ D E D++L+GDDPW EF + V I I +E+Q+M
Sbjct: 826 RMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 882
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 31/201 (15%)
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSS-----SIVPEPATSQRDVESEPVSHMNITLQ 284
LP+ G S + + LFG+ S S VP A+S D E+ P+S +
Sbjct: 618 LPQAYPGKSLALEPGNPQNPSLFGVDPDSGLFLPSTVPRFASSSGDAEASPMSLTD---- 673
Query: 285 QHRTFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
F+N S T HE L + Q+NS S ++ KV+K
Sbjct: 674 --SGFQNSLYSCMQDTT-----------HELLHGAG------QINS-SNQTKNFVKVYKS 713
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKD-WLVVYTDNEGDMMLVGDDPW 403
G ++GRS+D+S+F+ Y EL EL ++F G L P + W +V+ D E D++L+GDDPW
Sbjct: 714 G-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPW 772
Query: 404 QEFCAMVRKIYIYPKEEIQKM 424
+ F V I I E++ +M
Sbjct: 773 ESFVNNVWYIKILSPEDVHQM 793
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 31/181 (17%)
Query: 230 LPRQLSGNSCGVAKPKDGDCKLFGISLSS-----SIVPEPATSQRDVESEPVSHMNITLQ 284
LP+ G S + + LFG+ S S VP A+S D E+ P+S +
Sbjct: 618 LPQAYPGKSLALEPGNPQNPSLFGVDPDSGLFLPSTVPRFASSSGDAEASPMSLTD---- 673
Query: 285 QHRTFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHKK 344
F+N S T HE L + Q+NS S ++ KV+K
Sbjct: 674 --SGFQNSLYSCMQDTT-----------HELLHGAG------QINS-SNQTKNFVKVYKS 713
Query: 345 GIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKD-WLVVYTDNEGDMMLVGDDPW 403
G ++GRS+D+S+F+ Y EL EL ++F G L P + W +V+ D E D++L+GDDPW
Sbjct: 714 G-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPW 772
Query: 404 Q 404
+
Sbjct: 773 E 773
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDWLVVYTDNEGDMMLV 398
K++ +G+ +GR V+LS +N+Y +L +DQLF + ++ + +VY D EGD +LV
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS-KKDSWDLNRQYTLVYEDTEGDKVLV 141
Query: 399 GDDPWQEFCAMVRKIYIYPKEEIQKMSP 426
GD PW+ F + V+++++ +SP
Sbjct: 142 GDVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF-----------EFGGE------LTSPH 381
K++ G+ +GR VDL+ +N Y++L +D+LF + GE L
Sbjct: 154 VKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGK 213
Query: 382 KDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEI 421
++ + Y DNEGD MLVGD PWQ F + V+++ + EI
Sbjct: 214 GEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF--------EFGGE---------LTSPH 381
K++ G+ +GR VDLS N Y++L +D+LF +F L +
Sbjct: 152 VKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGN 211
Query: 382 KDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEI 421
++ + Y DNEGD MLVGD PWQ F + V+++ + EI
Sbjct: 212 GEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 281 ITLQQHRTFENDQKSGHTRGTKPADGQ--VVADDHESLQTSQPLVKDVQLNSH-SGSARS 337
I L + + N+Q R + DG+ VV +D +KDV + +
Sbjct: 76 IGLHRMNSLVNNQAMKAAR-AEEGDGEKKVVKNDE---------LKDVSMKVNPKVQGLG 125
Query: 338 CTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHK------------DWL 385
KV+ G+ +GR VD+ + Y+ L L+++F FG T+ + D++
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF-FGMTGTTCREKVKPLRLLDGSSDFV 184
Query: 386 VVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENHS 438
+ Y D EGD MLVGD PW+ F V+++ I E ++P K+ + ++
Sbjct: 185 LTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNN 237
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 286 HR--TFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHK 343
HR + N+Q + R + A + V DD KDV + KV+
Sbjct: 86 HRMNSLVNNQATKSAREEEEAGKKKVKDDEP---------KDVTKKVNGKVQVGFIKVNM 136
Query: 344 KGIALGRSVDLSKFNDYDELIAELDQLF--------EFGGELTSPHK------DWLVVYT 389
G+A+GR VDL+ + Y+ L L+ +F + T P + ++++ Y
Sbjct: 137 DGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYE 196
Query: 390 DNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEE 435
D EGD MLVGD PW+ F V+++ + E L+++N+E
Sbjct: 197 DKEGDWMLVGDVPWRMFINSVKRLRVMKTSE-----ANGLAARNQE 237
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 286 HR--TFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHK 343
HR + N+Q + R + A + V DD KDV + KV+
Sbjct: 85 HRMNSLVNNQATKSAREEEEAGKKKVKDDEP---------KDVTKKVNGKVQVGFIKVNM 135
Query: 344 KGIALGRSVDLSKFNDYDELIAELDQLF--------EFGGELTSPHK------DWLVVYT 389
G+A+GR VDL+ + Y+ L L+ +F + T P + ++++ Y
Sbjct: 136 DGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYE 195
Query: 390 DNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEE 435
D EGD MLVGD PW+ F V+++ + E L+++N+E
Sbjct: 196 DKEGDWMLVGDVPWRMFINSVKRLRVMKTSE-----ANGLAARNQE 236
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 286 HR--TFENDQKSGHTRGTKPADGQVVADDHESLQTSQPLVKDVQLNSHSGSARSCTKVHK 343
HR + N+Q + R + A + V DD KDV + KV+
Sbjct: 85 HRMNSLVNNQATKSAREEEEAGKKKVKDDEP---------KDVTKKVNGKVQVGFIKVNM 135
Query: 344 KGIALGRSVDLSKFNDYDELIAELDQLF--------EFGGELTSPHK------DWLVVYT 389
G+A+GR VDL+ + Y+ L L+ +F + T P + ++++ Y
Sbjct: 136 DGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYE 195
Query: 390 DNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEE 435
D EGD MLVGD PW+ F V+++ + E L+++N+E
Sbjct: 196 DKEGDWMLVGDVPWRMFINSVKRLRVMKTSE-----ANGLAARNQE 236
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFG-----GELTSPHKDWLVVYTDNEG 393
KV+ +G+ +GR +DL N Y +LI LD +F E K ++ Y D EG
Sbjct: 85 VKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKEG 144
Query: 394 DMMLVGDDPWQEFCAMVRKIYI 415
D M+VGD PW+ F + VR++ I
Sbjct: 145 DWMMVGDVPWEMFLSSVRRLKI 166
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKDW------LVVYTDNE 392
KV+ +G+ +GR +DL N Y +LI LD +F L + +D ++ Y D E
Sbjct: 87 VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFN-ASILWAEEEDMCNEKSHVLTYADKE 145
Query: 393 GDMMLVGDDPWQEFCAMVRKIYI 415
GD M+VGD PW+ F + VR++ I
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFE---FGGELTSPHKDWLVVYTDNEGDM 395
KV+ +G+ +GR +DL F+ Y+ L+ L +F+ G H ++ Y D +GD
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHH--VLTYEDKDGDW 132
Query: 396 MLVGDDPWQEFCAMVRKIYI 415
M+VGD PW F VR++ I
Sbjct: 133 MMVGDIPWDMFLETVRRLKI 152
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFG-GELTSPH----KDWLVVYTDNEG 393
KV G R +DL+ + Y EL+ L+ +F+F GE D++ Y D +G
Sbjct: 91 VKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDG 150
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTL 429
D MLVGD PW+ F + +++ I E++ + G L
Sbjct: 151 DWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL 186
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF----------EFGGELTSPHK------ 382
KV GI +GR +DL+ Y+ L L+++F E G + +P K
Sbjct: 139 VKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGS 198
Query: 383 -DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEE 420
++ Y D EGD MLVGD PW F VR++ I E
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF----------EFGGELTSPHK------ 382
KV GI +GR +DL+ Y+ L L+++F E G + +P K
Sbjct: 139 VKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGS 198
Query: 383 -DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEE 420
++ Y D EGD MLVGD PW F VR++ I E
Sbjct: 199 SGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFG-GELTS----PHKDWLVVYTDNEG 393
KV G R +DLS + Y EL+ L+ +F+F GE D++ Y D +G
Sbjct: 95 VKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDG 154
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGT 428
D ML+GD PW+ F +++ I E + + G
Sbjct: 155 DWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCGV 189
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 327 QLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLF------------EFG 374
+++ GS KV G R VDL + +Y EL + L+++F G
Sbjct: 207 EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAG 266
Query: 375 GELTSPHK--------DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYI 415
++ S K D+++ Y D +GD MLVGD PW+ F + +K+ I
Sbjct: 267 KDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKI 315
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 327 QLNSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLF------------EFG 374
+++ GS KV G R VDL + +Y EL + L+++F G
Sbjct: 207 EVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAG 266
Query: 375 GELTSPHK--------DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYI 415
++ S K D+++ Y D +GD MLVGD PW+ F + +K+ I
Sbjct: 267 KDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKI 315
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF--------------------EFGGELT 378
KV G+ +GR VDL+ + Y L LD +F +L
Sbjct: 154 VKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLL 213
Query: 379 SPHKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYI 415
++++ Y D +GD MLVGD PWQ F V ++ I
Sbjct: 214 DGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRI 250
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 310 ADDHESLQTSQPLVKDVQLNSHSGSARS--CTKVHKKGIALGRSVDLSKFNDYDELIAEL 367
A + +L+ SQ + K+ S S R+ KV GI +GR +DL+ Y+ L L
Sbjct: 111 ATEDPNLEISQAVNKN---RSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTL 167
Query: 368 DQLF----------EFGGELTSPHK-------DWLVVYTDNEGDMMLVGDDPWQEFCAMV 410
+++F E G + +P K ++ Y D EGD MLVGD PW F V
Sbjct: 168 EEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSV 227
Query: 411 RKIYIYPKEE 420
R++ I E
Sbjct: 228 RRLRIMKTSE 237
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFGGELTSPHKD-----WLVVYTDNEG 393
KV G+ R +DL YD+L LD+LF F G + KD ++ +Y D +G
Sbjct: 99 VKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRG-IGVALKDGDNCEYVTIYEDKDG 157
Query: 394 DMMLVGDDPWQEFCAMVRKIYIYPKEE 420
D ML GD PW F +++ I + +
Sbjct: 158 DWMLAGDVPWGMFLESCKRLRIMKRSD 184
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 329 NSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLFE---FGGELTSPHKDWL 385
N + A KV G+ R +DL N Y L+ L+ LF G +++
Sbjct: 86 NEEASKAIGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYI 145
Query: 386 VVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEE 420
++Y D + D MLVGD PWQ F +++ I + +
Sbjct: 146 IIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSD 180
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 327 QLNSHSGSARSC--TKVHKKGIALGRSVDLSKFNDYDELIAELDQLF------EFGG--- 375
+ + SG + C KV +G R +DL + Y EL + L+++F +FG
Sbjct: 174 EAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGG 233
Query: 376 ---------ELTSPHK--DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 424
LT + +++V Y D + D MLVGD PW+ F +K+ I E +
Sbjct: 234 CGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGL 293
Query: 425 SPGTLSSKNEEN 436
+P + N
Sbjct: 294 APRVMEKCRSRN 305
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEFG-GELTSPH----KDWLVVYTDNEG 393
KV G R +DL + +Y EL+ L+ +F+F GE + ++ Y D +G
Sbjct: 77 VKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKDG 136
Query: 394 DMMLVGDDPWQEFCAMVRKIYI 415
D MLVGD PW F + +K+ I
Sbjct: 137 DWMLVGDVPWDMFSSSCQKLRI 158
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEF------------GGELTSPHK---- 382
KV G R VDL + Y +L + L+++F G E S K
Sbjct: 202 VKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDL 261
Query: 383 ----DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTL-SSKNEE 435
++++ Y D +GD MLVGD PW+ F +K+ I + ++PG + SKN+E
Sbjct: 262 LHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNKE 319
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEF------------GGELTSPHK---- 382
KV G R VDL + Y +L + L+++F G E S K
Sbjct: 202 VKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDL 261
Query: 383 ----DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTL-SSKNEE 435
++++ Y D +GD MLVGD PW+ F +K+ I + ++PG + SKN+E
Sbjct: 262 LHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNKE 319
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 339 TKVHKKGIALGRSVDLSKFNDYDELIAELDQLFEF------------GGELTSPHK---- 382
KV G R VDL + Y +L + L+++F G E S K
Sbjct: 219 VKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDL 278
Query: 383 ----DWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTL-SSKNEE 435
++++ Y D +GD MLVGD PW+ F +K+ I + ++PG + SKN+E
Sbjct: 279 LHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNKE 336
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 270 DVESEPVSHMNITLQQHRTFENDQKSGHTR--GTKPADGQVVADDHESLQTSQPLVKDVQ 327
++ +EP + T TF++ +KS + PA QVV +V Q
Sbjct: 43 NLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVS-CQ 101
Query: 328 LNSHSGSARSCTKVHKKGIALGRSVDLSKFNDYDELIAELDQLF------EFGGE----- 376
+S A + KV G R +DL + YDEL L +F + GGE
Sbjct: 102 KSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMID 161
Query: 377 ------LTSPHKDWLVV--YTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSP 426
L W V Y D +GD MLVGD PW F +++ + + ++P
Sbjct: 162 FMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAP 219