Miyakogusa Predicted Gene

Lj4g3v2871910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2871910.1 Non Chatacterized Hit- tr|K4AWJ2|K4AWJ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.5,6e-16,MYB_LIKE,Myb-like domain; Myb_DNA-bind_4,NULL;
seg,NULL,gene.g57613.t1.1
         (355 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33550.1 | Symbols:  | Homeodomain-like superfamily protein |...   194   8e-50
AT4G31270.1 | Symbols:  | sequence-specific DNA binding transcri...    70   2e-12
AT2G35640.1 | Symbols:  | Homeodomain-like superfamily protein |...    70   3e-12
AT1G31310.1 | Symbols:  | hydroxyproline-rich glycoprotein famil...    62   7e-10

>AT2G33550.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr2:14210180-14211487 REVERSE LENGTH=314
          Length = 314

 Score =  194 bits (493), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 165/323 (51%), Gaps = 51/323 (15%)

Query: 45  IKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSL 104
           +K  R PRWTRQE LVLI+ K++ EN    G  R    A  SG + P     KW  VSS 
Sbjct: 31  VKTARLPRWTRQEILVLIQGKRVAENRVRRG--RAAGMALGSGQMEP-----KWASVSSY 83

Query: 105 CQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFDA 164
           C++HGV RG VQCRKRW NL  D++KIK+WE+ IKEETES+W+MRND+R+EKKLPGFFD 
Sbjct: 84  CKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIKEETESYWVMRNDVRREKKLPGFFDK 143

Query: 165 VVYNVLDGGVCTVGAFPLTLVKMSEGKTEKTXXXXXXXXXXXXXXXXXXXXXXXXXXAIV 224
            VY+++DGGV    A P+  + ++    E                             ++
Sbjct: 144 EVYDIVDGGVIPP-AVPVLSLGLAPASDEGLLSDLDRRESPEKLNSTPVAKSVTD---VI 199

Query: 225 DSEKMGWXXXXXXXXXXXXGVRVSGQVKTPIPRRTRMRGGLQFTPTFTLPNSGYHGEPVQ 284
           D EK                V   G+VK   P    + G                G   Q
Sbjct: 200 DKEKQ------------EACVADQGRVKEKQPEAANVEG----------------GSTSQ 231

Query: 285 EGPKRRRIS------------PENSEDDIVKVMRRNSDILKAHLGAQNMNQQLAREQQKQ 332
           E  KR+R S             +  ++ +++++ RN  +L A L  QN+N +L REQ+K 
Sbjct: 232 EERKRKRTSFGEKEEEEEEGETKKMQNQLIEILERNGQLLAAQLEVQNLNLKLDREQRKD 291

Query: 333 QTESLVATLGKLADALTKIADKL 355
             +SLVA L KLADA+ KIADK+
Sbjct: 292 HGDSLVAVLNKLADAVAKIADKM 314


>AT4G31270.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr4:15183291-15184503 REVERSE
           LENGTH=294
          Length = 294

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 44  RIKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSS 103
           R ++   P W  ++ LVL+     VE         F                 KW +++ 
Sbjct: 10  RTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSSF----------------QKWTMITE 53

Query: 104 LCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFD 163
            C    V R   QCR++W +L++D+ +IKKWE+  +    S+W + +D RK   LPG  D
Sbjct: 54  NCNALDVSRNLNQCRRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDID 113

Query: 164 AVVYNVLDGGV 174
             ++  ++  V
Sbjct: 114 IELFEAINAVV 124


>AT2G35640.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr2:14982835-14984182 FORWARD LENGTH=340
          Length = 340

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 45  IKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSL 104
           ++  R   WT  ETLVLIE+KK+ +          RS     G   P   + +W  +   
Sbjct: 14  MRECRKGNWTVSETLVLIEAKKMDDQ-----RRVRRSEKQPEGRNKP--AELRWKWIEEY 66

Query: 105 CQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEE------TESFWIMRNDLRKEKKL 158
           C + G  R   QC  +W NL+ D++KI+++E S  E       + S+W M    RKEK L
Sbjct: 67  CWRRGCYRNQNQCNDKWDNLMRDYKKIREYERSRVESSFNTVTSSSYWKMDKTERKEKNL 126

Query: 159 PGFFDAVVYNVL 170
           P      +Y+VL
Sbjct: 127 PSNMLPQIYDVL 138


>AT1G31310.1 | Symbols:  | hydroxyproline-rich glycoprotein family
           protein | chr1:11198565-11200025 REVERSE LENGTH=383
          Length = 383

 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 16/142 (11%)

Query: 45  IKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSL 104
           ++  R   WT  ET+VLIE+K++ +            P     + S    + +W  +   
Sbjct: 11  MREYRKGNWTLNETMVLIEAKRMDDERRMRRSIGLPPPEQQQDIRSNKPAELRWKWIEDY 70

Query: 105 CQQHGVKRGAVQCRKRWGNLLTDFRKIKKW-----ETSIKE-----------ETESFWIM 148
           C + G  R   QC  +W NL+ D++K++++     E+SI             ET S+W M
Sbjct: 71  CWRKGCMRSQNQCNDKWDNLMRDYKKVREYERRRVESSITAGESSSSSAPAGETASYWKM 130

Query: 149 RNDLRKEKKLPGFFDAVVYNVL 170
               RKE+ LP       Y  L
Sbjct: 131 EKSERKERSLPSNMLPQTYQAL 152