Miyakogusa Predicted Gene

Lj4g3v2871740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2871740.1 Non Chatacterized Hit- tr|I1K572|I1K572_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27684
PE,82.29,0,TRANSALDOLASE_1,Transaldolase, active site; no
description,Aldolase-type TIM barrel; seg,NULL; Aldol,CUFF.51798.1
         (363 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protei...   291   4e-79

>AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:4302080-4304212 REVERSE LENGTH=438
          Length = 438

 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 143/209 (68%), Positives = 172/209 (82%), Gaps = 6/209 (2%)

Query: 96  NGTRIKEGRTILHDLYEKHGQSPYYDHLCRPVSDLLPFIESGIRGVTTNPAIFEKAISSS 155
           NGT  K  RT LHDLYEK GQSP+YD+LCRPV+DLLP I  G+RGVT+NPAIF+KAIS+S
Sbjct: 68  NGTAGK--RTTLHDLYEKEGQSPWYDNLCRPVTDLLPLIARGVRGVTSNPAIFQKAISTS 125

Query: 156 NAYNAQLRELVEAGKDIENAYWELVVKDIQDTCKLLEPIYNEKDGDDGHVSLAVSPKLAN 215
           NAYN Q R LVE+GKDIE+AYWELVVKDIQD CKL EPIY++ +G DG+VS+ VSP+LA+
Sbjct: 126 NAYNDQFRTLVESGKDIESAYWELVVKDIQDACKLFEPIYDQTEGADGYVSVEVSPRLAD 185

Query: 216 DTKGTIEAAKWLHEMVGYPNVYIKIPATERSIPSIKEVISLGISVNVTLIFCLHSYEAVI 275
           DT+GT+EAAK+L ++V   NVYIKIPAT   IPSI++VI+ GISVNVTLIF +  YEAVI
Sbjct: 186 DTQGTVEAAKYLSKVVNRRNVYIKIPATAPCIPSIRDVIAAGISVNVTLIFSIARYEAVI 245

Query: 276 NAYLDGLEASGM----FVYLNSSYFVSIV 300
           +AYLDGLEASG+     V   +S+FVS V
Sbjct: 246 DAYLDGLEASGLDDLSRVTSVASFFVSRV 274