Miyakogusa Predicted Gene

Lj4g3v2860640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860640.1 Non Chatacterized Hit- tr|D7M0L1|D7M0L1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,56.79,6e-18,
,CUFF.51787.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07380.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   268   2e-72
AT5G07380.2 | Symbols:  | unknown protein; Has 84 Blast hits to ...   268   3e-72
AT5G07380.1 | Symbols:  | unknown protein; Has 84 Blast hits to ...   268   3e-72

>AT5G07380.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: egg cell; Has
           84 Blast hits to 81 proteins in 31 species: Archae - 0;
           Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41;
           Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
           | chr5:2332527-2335736 FORWARD LENGTH=642
          Length = 642

 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 132/249 (53%), Positives = 172/249 (69%), Gaps = 1/249 (0%)

Query: 2   ISNVLSERVLYSWEGRDIERRVIFVTSTLPEDVDSTMQKSLMDAADKCVSVDFALFQQKS 61
           +S+VL +R LYSW GRDI R+VI ++S  PED+DS  + +LM A DKCVSV+F LF+++ 
Sbjct: 106 LSSVLCDRALYSWGGRDIMRKVIVLSSCFPEDMDSEAKNTLMAATDKCVSVEFLLFEKQE 165

Query: 62  SHLTDSRENINTFRRCISHFDNCSVQTYIPDFRIFHGLVKRWLQILKDDMEEPFLARLIF 121
           S+L+ ++E IN F RC+S  DNCS QT IPD +  HGL KRWLQ LKDD  E   A++IF
Sbjct: 166 SYLSYTQEKINRFLRCLSDLDNCSFQTCIPDGKSLHGLEKRWLQELKDDTGESLQAQIIF 225

Query: 122 KDNLLGSVNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQA-EKKLNGISCPVTGCNLE 180
           K NL+GSVN++FCN+ A    I + F  CQTCRCHGIPL  + EK    + C VT   L 
Sbjct: 226 KSNLVGSVNKVFCNITAATNQIVDGFIPCQTCRCHGIPLQDSVEKPTEKLKCSVTNHELG 285

Query: 181 TCDVIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVV 240
             DVIENSV+VG +T LFLP+ H   KL  ++S ++ NV ER NL SL EGL++G  ++V
Sbjct: 286 KYDVIENSVKVGNRTTLFLPTIHSLQKLHPVSSQVDFNVIERTNLTSLSEGLLLGIPYIV 345

Query: 241 TPSPNHVNE 249
           +PS  H  E
Sbjct: 346 SPSTCHETE 354


>AT5G07380.2 | Symbols:  | unknown protein; Has 84 Blast hits to 81
           proteins in 31 species: Archae - 0; Bacteria - 0;
           Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr5:2332527-2335736 FORWARD LENGTH=641
          Length = 641

 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 132/249 (53%), Positives = 172/249 (69%), Gaps = 1/249 (0%)

Query: 2   ISNVLSERVLYSWEGRDIERRVIFVTSTLPEDVDSTMQKSLMDAADKCVSVDFALFQQKS 61
           +S+VL +R LYSW GRDI R+VI ++S  PED+DS  + +LM A DKCVSV+F LF+++ 
Sbjct: 105 LSSVLCDRALYSWGGRDIMRKVIVLSSCFPEDMDSEAKNTLMAATDKCVSVEFLLFEKQE 164

Query: 62  SHLTDSRENINTFRRCISHFDNCSVQTYIPDFRIFHGLVKRWLQILKDDMEEPFLARLIF 121
           S+L+ ++E IN F RC+S  DNCS QT IPD +  HGL KRWLQ LKDD  E   A++IF
Sbjct: 165 SYLSYTQEKINRFLRCLSDLDNCSFQTCIPDGKSLHGLEKRWLQELKDDTGESLQAQIIF 224

Query: 122 KDNLLGSVNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQA-EKKLNGISCPVTGCNLE 180
           K NL+GSVN++FCN+ A    I + F  CQTCRCHGIPL  + EK    + C VT   L 
Sbjct: 225 KSNLVGSVNKVFCNITAATNQIVDGFIPCQTCRCHGIPLQDSVEKPTEKLKCSVTNHELG 284

Query: 181 TCDVIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVV 240
             DVIENSV+VG +T LFLP+ H   KL  ++S ++ NV ER NL SL EGL++G  ++V
Sbjct: 285 KYDVIENSVKVGNRTTLFLPTIHSLQKLHPVSSQVDFNVIERTNLTSLSEGLLLGIPYIV 344

Query: 241 TPSPNHVNE 249
           +PS  H  E
Sbjct: 345 SPSTCHETE 353


>AT5G07380.1 | Symbols:  | unknown protein; Has 84 Blast hits to 81
           proteins in 31 species: Archae - 0; Bacteria - 0;
           Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr5:2332527-2335736 FORWARD LENGTH=641
          Length = 641

 Score =  268 bits (685), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 132/249 (53%), Positives = 172/249 (69%), Gaps = 1/249 (0%)

Query: 2   ISNVLSERVLYSWEGRDIERRVIFVTSTLPEDVDSTMQKSLMDAADKCVSVDFALFQQKS 61
           +S+VL +R LYSW GRDI R+VI ++S  PED+DS  + +LM A DKCVSV+F LF+++ 
Sbjct: 105 LSSVLCDRALYSWGGRDIMRKVIVLSSCFPEDMDSEAKNTLMAATDKCVSVEFLLFEKQE 164

Query: 62  SHLTDSRENINTFRRCISHFDNCSVQTYIPDFRIFHGLVKRWLQILKDDMEEPFLARLIF 121
           S+L+ ++E IN F RC+S  DNCS QT IPD +  HGL KRWLQ LKDD  E   A++IF
Sbjct: 165 SYLSYTQEKINRFLRCLSDLDNCSFQTCIPDGKSLHGLEKRWLQELKDDTGESLQAQIIF 224

Query: 122 KDNLLGSVNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQA-EKKLNGISCPVTGCNLE 180
           K NL+GSVN++FCN+ A    I + F  CQTCRCHGIPL  + EK    + C VT   L 
Sbjct: 225 KSNLVGSVNKVFCNITAATNQIVDGFIPCQTCRCHGIPLQDSVEKPTEKLKCSVTNHELG 284

Query: 181 TCDVIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVV 240
             DVIENSV+VG +T LFLP+ H   KL  ++S ++ NV ER NL SL EGL++G  ++V
Sbjct: 285 KYDVIENSVKVGNRTTLFLPTIHSLQKLHPVSSQVDFNVIERTNLTSLSEGLLLGIPYIV 344

Query: 241 TPSPNHVNE 249
           +PS  H  E
Sbjct: 345 SPSTCHETE 353