Miyakogusa Predicted Gene
- Lj4g3v2833050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2833050.1 tr|G7LFP2|G7LFP2_MEDTR Glutamyl-tRNA(Gln)
amidotransferase subunit A OS=Medicago truncatula
GN=MTR_8,84.73,0,seg,NULL; GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT
A,NULL; AMIDASE,Amidase; Amidase signature (AS,CUFF.51763.1
(609 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase... 457 e-128
AT3G25660.1 | Symbols: | Amidase family protein | chr3:9339640-... 162 8e-40
AT5G07360.1 | Symbols: | Amidase family protein | chr5:2326925-... 87 4e-17
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM6... 83 4e-16
AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidas... 82 1e-15
AT5G07360.2 | Symbols: | Amidase family protein | chr5:2326925-... 75 1e-13
AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at th... 73 5e-13
AT4G34880.1 | Symbols: | Amidase family protein | chr4:16615549... 67 4e-11
>AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase |
chr5:25766229-25770260 FORWARD LENGTH=607
Length = 607
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/593 (41%), Positives = 350/593 (59%), Gaps = 15/593 (2%)
Query: 27 YLQANVKAPRMTGILVKIFTWFLESRIFGGLLLYILKGNNLIHKLITNAELEEPPLYVPL 86
Y +KAP +TG+ K+F LE+ + G L++ LK +N + K+ N + E P++ P
Sbjct: 20 YKAETMKAPHLTGLSFKLFVNLLEAPLIGSLIVDYLKKDNGMTKIFRNTVIPEEPMFRPE 79
Query: 87 HHFEDHKEKEVKCLDSALTPPEKIHLAIDCLPT--SSETAHNGTRPSFCRWTIMDYSRAY 144
++ E +V + +P +++ A+ CLP S + H SF W I DY+ AY
Sbjct: 80 FPSQE-PEHDVVIVGEDESPIDRLETALKCLPQYDPSRSLHADPVSSFRYWKIRDYAYAY 138
Query: 145 SSGDITPNLVAERFIAAVDESSKPSLQMGFFINYTAEDILRQAHESTLRHQRGEPISVLD 204
S TP VA+R I+ ++E F I + A ++++QA ST R ++G PISVLD
Sbjct: 139 RSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISVLD 198
Query: 205 GVLVAIKDEIDCLPYPTTGGTKWLHDQRPCTDDACCVKRLRLCGAILVGKTNMHELGAGT 264
G+ V IKD+IDCLP+PT GGT WLH+ R D+ V +LR CGAIL+GK NMHELG GT
Sbjct: 199 GIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGT 258
Query: 265 SGINPHYGAARNPYDTNRIXXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGL 324
+G N +YG RNP+D R LC ALG DGGGSVR+P+ALCG+ GL
Sbjct: 259 TGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGITGL 318
Query: 325 KPTFNRVPHSGVLPLNWTVGMVGILADTVEDALITYAAISGEIPSHQPSSVHTKINLPLL 384
K T+ R +G L TV ++G LA ++EDA + YAAI G S + K + P
Sbjct: 319 KTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILG---SSSADRYNLKPSPPCF 375
Query: 385 PL------TKSISDIRLAKYGKWFDDC-SDEVRTCCSHALSKLQHHYGWKTVDVTIPEIE 437
P + +I +RL KY KWF+D S ++ C L L +++G K V++ +PE+E
Sbjct: 376 PKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKVVEIVVPELE 435
Query: 438 VMRLAHYITIASECYTSLDSFRDK-HLAESGWDVRVGLNIYGAFSSMEYIKAQKIRNRQL 496
MR AH I+I S +SL + + ++ +D R I+ +FS+ +YI AQ +R R +
Sbjct: 436 EMRAAHVISIGSPTLSSLTPYCEAGKNSKLSYDTRTSFAIFRSFSASDYIAAQCLRRRLM 495
Query: 497 QFHNKIFAEADVIVSPTTGVTAYPIQDDAQKTGELDYVNGAALIRYSISGNFLGLPAVTV 556
++H IF + DVIV+PTTG+TA I DA K GE + L+R+ ++ N LG PA++V
Sbjct: 496 EYHLNIFKDVDVIVTPTTGMTAPVIPPDALKNGETNIQVTTDLMRFVLAANLLGFPAISV 555
Query: 557 PVGYDKMGLPIGLQFIGRPWAEATLLHLAFAMQAICLTEYRKPVIFYDLLRKD 609
PVGYDK GLPIGLQ +GRPWAEAT+L LA A++ + +KP IFYD+L +
Sbjct: 556 PVGYDKEGLPIGLQIMGRPWAEATVLGLAAAVEELAPVT-KKPAIFYDILNTN 607
>AT3G25660.1 | Symbols: | Amidase family protein |
chr3:9339640-9342044 REVERSE LENGTH=537
Length = 537
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 246/524 (46%), Gaps = 60/524 (11%)
Query: 103 ALTPPEKIHLAIDCLPTSSETAHNGTRPSFCRWTIMDYSRAYSSGDITPNLVAERFIAAV 162
+L P + ++ + +S + + S + I+ R+ SG+ T +A+ +++ +
Sbjct: 12 SLLPLRRFQISKTIVSAASSKTIDTSVISPPQSQILTTRRSLLSGETTAVEIAKSYLSRI 71
Query: 163 DESSKPSLQMGFFINYTAEDILRQAHESTLRHQRGEPISVLDGVLVAIKDEIDCLPYPTT 222
++P L+ F+ + +E++L+ A E R +GE + L GVL+ +KD I P+T
Sbjct: 72 -RLTEPQLKC--FL-HVSENVLKDAQEIDQRIAKGEELGPLAGVLIGVKDNICTQGMPST 127
Query: 223 GGTKWLHDQRPCTDDACCVKRLRLCGAILVGKTNMHELGAGTSGINPHYGAARNPYDTNR 282
++ L RP D A VK+++ G I+VGKTNM E G G++ + NP+D +R
Sbjct: 128 AASRILEHYRPPFD-ATAVKKIKELGGIVVGKTNMDEFGMGSTTEASAFQVTANPWDLSR 186
Query: 283 IXXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGLKPTFNRVPHSGVLPLNWT 342
+ C V+LG D GGSVR PA+ CGVVGLKPT+ RV G++ +
Sbjct: 187 VPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASS 246
Query: 343 VGMVGILADTVEDALITYAAISGEIPSHQPSSVHTKINLPLLPL---------TKSISDI 393
+ ++G TV DA + AISG + S +K ++P +K ++ +
Sbjct: 247 LDVIGCFGSTVADAGMLLHAISG---YDRFDSTSSKQDVPEFQSQFLSVDHFESKPLNGV 303
Query: 394 RLAKYGKWFDDCSDE-VRTCCSHALSKLQHHYGWKTVDVTIPEIEVMRLAHYITIASECY 452
++ + +D D VR+ A S L+ G +V++P + A+Y+ +SE
Sbjct: 304 KVGIIRETLEDGVDSGVRSATQEAASHLE-ALGCILTEVSLPSFSLGLPAYYVIASSESS 362
Query: 453 TSL---DSFR--DKHLAES-------------GWDV--RVGLNIY---GAFSSMEYIKAQ 489
++L D R ++ +AE G +V R+ + Y + Y +AQ
Sbjct: 363 SNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRILMGTYALSAGYYDAYYKRAQ 422
Query: 490 KIRNRQLQFHNKIFAEADVIVSPTTGVTAYPI---QDD--AQKTGELDYVNGAALIRYSI 544
++R + + D+++SP AY I +DD A G++ VN
Sbjct: 423 QVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEKKDDPLAMYAGDIMTVN--------- 473
Query: 545 SGNFLGLPAVTVPVGYDK---MGLPIGLQFIGRPWAEATLLHLA 585
N GLPA+ +P G + GLP+GLQ IG + E LL +
Sbjct: 474 -VNLAGLPAMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKVG 516
>AT5G07360.1 | Symbols: | Amidase family protein |
chr5:2326925-2330011 REVERSE LENGTH=659
Length = 659
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 171/439 (38%), Gaps = 57/439 (12%)
Query: 176 INYTAEDILRQAHESTLRHQRGEPISVLDGVLVAIKDEIDCLPYPTTGGTKWLHDQRPCT 235
+ YT E +QA E+ +G + L G+ +KD + Y TT G+ DQ
Sbjct: 241 VTYTEELAYKQAKEADDLLSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQF-LD 299
Query: 236 DDACCVKRLRLCGAILVGKTNMHELGAGTSGINPHY--GAARNPYDTNRIXXXXXXXXXX 293
+A KRL+ GA+LV K L G+ + + G RNP++
Sbjct: 300 IEAWVYKRLKASGAVLVAK-----LVTGSMAYDDIWFGGRTRNPWNIEEFSTGSSAGPAA 354
Query: 294 XXXXXLCPVALGVDGGGSVRMPAALCGVVGLKPTFNRVPHSGVLPLNWTVGMVGILADTV 353
+ P A+G + GS+ PAA CG+ L+PTF V +GV+ ++ ++ +G T
Sbjct: 355 STSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTA 414
Query: 354 EDALITYAAISGEIPSHQPSSVHTKINLPLLPLTKSISDIRLAKYGKWFDDCSDEVRTCC 413
D + AI G+ P S + P + I+ + + Y K D EV
Sbjct: 415 ADCAVILDAIKGKDPDDLSSREIAFED----PFSVDITKLTVG-YTKDADMKVVEVLGSK 469
Query: 414 SHALSKLQHHYGWKTVDVTIP-EIEVMRLAHYITIASECYTSLDSFRDKHLAESGWDVRV 472
+ + +Y ++V + ++V LAH+ L + A+ W V
Sbjct: 470 GVNMVPFELNYTVESVQGILNFTMDVDMLAHFDEWQRTGQEDL------YEAQDQWPVE- 522
Query: 473 GLNIYGAFSSMEYIKAQKIRNRQLQFHNKIFAEADVIVSPTTGVTAYPIQDDAQKTGELD 532
L ++++YI+AQ+ R + ++ K F D + T D +K
Sbjct: 523 -LRRARVVTAVDYIQAQRARGKLIREVEKSFT-VDAFIGNVT---------DWEKV---- 567
Query: 533 YVNGAALIRYSISGNFLGLPAVTVPVGYDKMGLP----------IGLQFIGRPWAEATLL 582
GN +GLP + +P G+ + P I P + L
Sbjct: 568 -----------CMGNLVGLPVLVIPTGFKNITDPPTNSCRRRTTINAGIYAPPERDHIAL 616
Query: 583 HLAFAMQAICLTEYRKPVI 601
L A Q++ ++P I
Sbjct: 617 ALGMAYQSVTDAHRKRPPI 635
>AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 |
translocon at the outer membrane of chloroplasts 64-V |
chr5:2928316-2931750 FORWARD LENGTH=603
Length = 603
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
Query: 203 LDGVLVAIKDEIDCLPYPTTGGT-KWLHDQRPCTDDACCVKRLRLCGAILVGKTNMHELG 261
L G+ +I D D Y T G +W A V L GA VGKT M ELG
Sbjct: 71 LSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTIMDELG 130
Query: 262 AGTSGINPHYGAARNPYDTNRIXXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGV 321
G G N HYG NP + + L +LG+D G VR+PAA CG+
Sbjct: 131 FGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRVPAAFCGI 190
Query: 322 VGLKPTFNRVPHSGVLPLNWTVGMVGILAD------TVEDALITYAAISGEIPSHQPSSV 375
+G +P+ V GVLP + ++ VG A V AL+ +A++ Q S +
Sbjct: 191 LGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAVTHR---RQRSLI 247
Query: 376 HTK--INLPLLPLTKSISDIRLA 396
L +P KS+ +R A
Sbjct: 248 FADDLFELSDIPKQKSVQVVRKA 270
>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidase 1
| chr1:2884455-2886430 FORWARD LENGTH=425
Length = 425
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 203 LDGVLVAIKDEIDCLPYPTT-GGTKWLHDQRPCTDDACCVKRLRLCGAILVGKTNMHELG 261
L G+ AIKD D T G WL T A V L GA +G T M E+
Sbjct: 28 LQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAPVVSSLLEAGATALGITIMDEMA 87
Query: 262 AGTSGINPHYGAARNPYDTNRIXXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGV 321
+G N HYG RNP +R+ L ++G D GGSVR+PA+ CG+
Sbjct: 88 YSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAARLVDFSIGTDTGGSVRVPASYCGI 147
Query: 322 VGLKPTFNRVPHSGVLPLNWTVGMVGILA 350
G +P+ V G+ P+ + VG A
Sbjct: 148 FGFRPSHGAVSTVGLTPMAQSFDTVGWFA 176
>AT5G07360.2 | Symbols: | Amidase family protein |
chr5:2326925-2330011 REVERSE LENGTH=652
Length = 652
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 168/439 (38%), Gaps = 64/439 (14%)
Query: 176 INYTAEDILRQAHESTLRHQRGEPISVLDGVLVAIKDEIDCLPYPTTGGTKWLHDQRPCT 235
+ YT E +QA E+ +G + L G+ +KD + Y TT G+ DQ
Sbjct: 241 VTYTEELAYKQAKEADDLLSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQF-LD 299
Query: 236 DDACCVKRLRLCGAILVGKTNMHELGAGTSGINPHY--GAARNPYDTNRIXXXXXXXXXX 293
+A KRL+ GA+LV K L G+ + + G RNP++
Sbjct: 300 IEAWVYKRLKASGAVLVAK-----LVTGSMAYDDIWFGGRTRNPWNIEEFSTGSSAGPAA 354
Query: 294 XXXXXLCPVALGVDGGGSVRMPAALCGVVGLKPTFNRVPHSGVLPLNWTVGMVGILADTV 353
+ G + GS+ PAA CG+ L+PTF V +GV+ ++ ++ +G T
Sbjct: 355 S-------TSAGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTA 407
Query: 354 EDALITYAAISGEIPSHQPSSVHTKINLPLLPLTKSISDIRLAKYGKWFDDCSDEVRTCC 413
D + AI G+ P S + P + I+ + + Y K D EV
Sbjct: 408 ADCAVILDAIKGKDPDDLSSREIAFED----PFSVDITKLTVG-YTKDADMKVVEVLGSK 462
Query: 414 SHALSKLQHHYGWKTVDVTIP-EIEVMRLAHYITIASECYTSLDSFRDKHLAESGWDVRV 472
+ + +Y ++V + ++V LAH+ L + A+ W V
Sbjct: 463 GVNMVPFELNYTVESVQGILNFTMDVDMLAHFDEWQRTGQEDL------YEAQDQWPVE- 515
Query: 473 GLNIYGAFSSMEYIKAQKIRNRQLQFHNKIFAEADVIVSPTTGVTAYPIQDDAQKTGELD 532
L ++++YI+AQ+ R + ++ K F D + T D +K
Sbjct: 516 -LRRARVVTAVDYIQAQRARGKLIREVEKSFT-VDAFIGNVT---------DWEKV---- 560
Query: 533 YVNGAALIRYSISGNFLGLPAVTVPVGYDKMGLP----------IGLQFIGRPWAEATLL 582
GN +GLP + +P G+ + P I P + L
Sbjct: 561 -----------CMGNLVGLPVLVIPTGFKNITDPPTNSCRRRTTINAGIYAPPERDHIAL 609
Query: 583 HLAFAMQAICLTEYRKPVI 601
L A Q++ ++P I
Sbjct: 610 ALGMAYQSVTDAHRKRPPI 628
>AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at the
outer membrane of chloroplasts 64-III |
chr3:6148030-6151794 FORWARD LENGTH=589
Length = 589
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 205 GVLVAIKDEIDCLPYPTT-GGTKWLHDQRPCTDDACCVKRLRLCGAILVGKTNMHELGAG 263
G+ A+ D D Y T G W+ + + V L GA VGKT + E
Sbjct: 60 GLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFS 119
Query: 264 TSGINPHYGAARNPYDTNRIXXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVG 323
SG N HY + NP RI ALG+D G VR+PA CGV+G
Sbjct: 120 ISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLG 179
Query: 324 LKPTFNRVPHSGVLPLNWTVGMVGILA 350
K ++ + ++G++P++ ++ VG A
Sbjct: 180 FKSSYGAISNTGIIPVSSSLDSVGWFA 206
>AT4G34880.1 | Symbols: | Amidase family protein |
chr4:16615549-16617424 FORWARD LENGTH=466
Length = 466
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 191/497 (38%), Gaps = 96/497 (19%)
Query: 131 SFCRWTIMDYSRAYSSGDITPNLVAERFIAAVDESSKPSLQMGFFINYTAEDILRQAH-- 188
S TI D A++ +T + E ++ A+ + + P L + T D L QA
Sbjct: 39 SIQEATIEDIRVAFNEKRLTSKQLVELYLEAISKLN-PILHA---VIETNPDALIQAEIA 94
Query: 189 --ESTLRHQRGEPISVLDGVLVAIKDEIDCLPYPTTGGTKWLHDQRPCTDDACCVKRLRL 246
E L++ PI L GV V +KD I T + DA VKRLR
Sbjct: 95 DRERDLKNTTKLPI--LHGVPVLLKDSISTKDKLNTTAGSFALLGSVVARDAGVVKRLRE 152
Query: 247 CGAILVGKTNMHELGAGTSGINPHYGAARNPYDTNRIXXXXXXXXXXXXXXXLCPVALGV 306
GA+++GK ++ E H+ + P
Sbjct: 153 SGAVILGKASLSEWA--------HFRSFSIP----------------------------- 175
Query: 307 DGGGSVRMPAALCGVVGLKPTFNRVPHSGVLPLNWTVGMVGILADTVEDALITYAAISGE 366
DG + + VVG+KP+ +GV+P++ +G + TV DA+ AI G
Sbjct: 176 DGWSA----PSQNSVVGIKPSVGLTSRAGVVPISLRQDSIGPICRTVSDAVHLLDAIVG- 230
Query: 367 IPSHQPSSVHTKINLPLLPLTK-----SISDIRLAKYGKWFDDCSDEVRTCCSHALSKLQ 421
+ P TK +P + S ++ + G S H + L+
Sbjct: 231 ---YDPLDEATKTASEFIPEGGYKQFLTTSGLKGKRLGIVMKHSS-----LLDHHIKTLR 282
Query: 422 HHYGWKTVDVTIPEIEVM----RLAHYITIASECYTSLDSFRDKHLAESGWDVRVGLNIY 477
++TIP IEV+ I + +E SL+++ K L +S + Y
Sbjct: 283 REGAIVINNLTIPNIEVIVGGTDSGEEIALLAEFKMSLNAYL-KELVKSPVRSLADVIAY 341
Query: 478 GAFSSMEYIKAQKIRNRQLQFHNKIFAEADVIVSPTTGV-----TAYPIQDDAQKTGELD 532
+ E+ + +K++ ++ ++F A+ T+G+ TA + + G
Sbjct: 342 ----NEEFAEQEKVK----EWGQEVFLTAEA----TSGMGEKEKTALQKMKELSRNGIEK 389
Query: 533 YVNGAALIRYSISGNFL-------GLPAVTVPVGYDKMGLPIGLQFIGRPWAEATLLHLA 585
+ L G+ L G P + VP GYD G+P G+ F G ++E L+ +A
Sbjct: 390 LIEENKLDAIVTLGSDLSSVLAIGGYPGINVPAGYDSGGVPYGISFGGLRFSEPKLIEIA 449
Query: 586 FAMQAICLTEYRKPVIF 602
FA + L RKP F
Sbjct: 450 FAFEQATL--IRKPPKF 464