Miyakogusa Predicted Gene
- Lj4g3v2829990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2829990.1 Non Chatacterized Hit- tr|I1L7U9|I1L7U9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,23.92,2e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Tetratricopeptide-like helical; seg,,CUFF.51757.1
(619 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 706 0.0
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 481 e-136
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 469 e-132
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 462 e-130
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-130
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 457 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 456 e-128
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-127
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 452 e-127
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 450 e-126
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 449 e-126
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 445 e-125
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 445 e-125
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 439 e-123
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 439 e-123
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 431 e-121
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 431 e-121
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 424 e-119
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 422 e-118
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 422 e-118
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 416 e-116
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-116
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 411 e-115
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 410 e-114
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 410 e-114
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 409 e-114
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 405 e-113
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 381 e-106
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 372 e-103
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 3e-97
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 351 7e-97
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 344 9e-95
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 1e-94
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 335 5e-92
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 330 2e-90
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 5e-89
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 324 1e-88
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 7e-88
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 320 2e-87
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 319 3e-87
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 5e-87
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 318 8e-87
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 316 3e-86
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 311 1e-84
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 306 4e-83
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 6e-83
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 3e-82
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 6e-79
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 8e-78
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 5e-75
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 273 3e-73
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 261 8e-70
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 6e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 9e-69
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 256 2e-68
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 256 4e-68
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 9e-66
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 245 8e-65
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 5e-62
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 223 3e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 218 7e-57
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 9e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 6e-53
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 8e-39
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 111 1e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 1e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 1e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 92 8e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 4e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 5e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 86 7e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 85 1e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 80 3e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 78 2e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 3e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 4e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 73 5e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 9e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 67 4e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 4e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 7e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 56 9e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/605 (54%), Positives = 455/605 (75%), Gaps = 10/605 (1%)
Query: 23 ERLAALIDRSKSXXXXXXXXXXXXRRGLDPHP---ILNFKLQRSYSSVGHLHHSVTLFNR 79
E+LA LID+S+S R L HP +LN KL R+Y+S G + HS+ LF++
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 80 TPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIH 136
T P++FL+T+ I+ S + DQA Y ++L+ + PN FTFSS+L C+ ++ + IH
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIH 149
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLR 196
HV+KF + PYV+TGLV YA+GGDV SA+KVFD M ERSLVS TAM+TCYAK G +
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 197 EARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLS 255
AR LF+ M RD+V WNVMID YAQ+G PN+ L+LF+K+LAE K +PDEIT++A LS
Sbjct: 210 AARALFDSM--CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 256 SCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
+C Q+GALE+GRWIH +V + + + V+V T L+DMY KCGSL++A +F++ +D+VA
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM 374
WN+MI GYA+HGYS++ALRLF+EM G+ G++P+D+TF+ L AC H+GLV++G IF M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 375 KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSL 434
YG++PKIEH+GC+V+LLGRAG+L+ Y+ ++ M D DSVLW ++L +C+LH + L
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 435 GEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNN 494
G+EIAE+++ N+ +SG YVLLSNIYA+ G++ G AKVR+LMK G+ KEPG S IE+ N
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 495 RIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEK 554
++HEF AGD H KS++IY ML +++ R+K++GY P T+ VL D+ E +KE SL+VHSE+
Sbjct: 508 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 567
Query: 555 LALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCS 614
LA+A+GLIST+PG+ +KI KNLRVC DCH+V K++SKITGRKI+ RDRNRFHHF +GSCS
Sbjct: 568 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCS 627
Query: 615 CGDYW 619
CGD+W
Sbjct: 628 CGDFW 632
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 481 bits (1239), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/565 (43%), Positives = 342/565 (60%), Gaps = 10/565 (1%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFT 119
S +S L ++ +F+ P+ FLW +I S SD+ +L Y RML NA+T
Sbjct: 58 SSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYT 117
Query: 120 FSSVLHGC-NLQA---ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
F S+L C NL A IH + K + Y L+ +YA G+ A +FD +
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
E VS +++ Y K G++ A LF M ++ + W MI Y Q M E L LF
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMA--EKNAISWTTMISGYVQADMNKEALQLF 235
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+M V PD ++L LS+C QLGALE G+WIHSY+ + ++ +G L+DMY KC
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G +++A ++F NI + V AW ++I GYA HG+ EA+ F EM MG+KP+ +TF AVL
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
TAC ++GLV +G IF M+ Y ++P IEH+GC+V+LLGRAG L+E ++ M P+
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+V+WG LL ACR+HKN+ LGEEI E +++ + G YV +NI+A W AA+ R L
Sbjct: 416 AVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRL 475
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLV 535
MK GV K PGCS I + HEF+AGD HP+ + I M +L+ NGY P+ + +
Sbjct: 476 MKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEM 535
Query: 536 LHD-IGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
L D + ++++E + HSEKLA+ +GLI T+PGT I+I+KNLRVC DCH V K++SKI
Sbjct: 536 LLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYK 595
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
R I+ RDR RFHHF +G CSCGDYW
Sbjct: 596 RDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 123/307 (40%), Gaps = 73/307 (23%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS--------------------- 98
L SY+ G+ + LF+R P P+ W S+I + +
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 99 -------------DQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIK 141
+AL + M VEP+ + ++ L C L+ + IH ++ K
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 142 FAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLL 201
+ + L+ YA+ G++ A +VF + ++S+ + TA+++ YA HG REA
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA--- 332
Query: 202 FEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG 261
+ F +M ++P+ IT AVL++C G
Sbjct: 333 ------------------------------ISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 262 ALESGRWI-HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSM 319
+E G+ I +S ++ + +VD+ + G LD+A++ + + + V W ++
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 320 IMGYAIH 326
+ IH
Sbjct: 423 LKACRIH 429
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/585 (41%), Positives = 353/585 (60%), Gaps = 31/585 (5%)
Query: 64 YSSVGHLHH-----SVTLFNRTPTPNVFLWTSIIHAHSHSDQALS------FYARMLAQP 112
+ + LHH + +FN+ P N F W +II S SD+ + FY M +
Sbjct: 64 FCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEF 123
Query: 113 VEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
VEPN FTF SVL C +Q + IH +K+ +V + LV Y G + A
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR 183
Query: 169 KVF-DEMSERSLVSVT-------------AMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
+F + E+ +V +T M+ Y + G + AR+LF+ M R VV
Sbjct: 184 VLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR--QRSVVS 241
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
WN MI Y+ NG + + +FR+M +RP+ +TL++VL + +LG+LE G W+H Y
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE 301
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
+ ++ +G+AL+DMY KCG ++ A +F+ + +V+ W++MI G+AIHG + +A+
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL 394
F +M GV+PSDV ++ +LTAC H GLV +G F+ M + G+EP+IEH+GCMV+LL
Sbjct: 362 CFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV 454
GR+G L+E + + M PD V+W LL ACR+ NV +G+ +A ++ SG YV
Sbjct: 422 GRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYL 514
LSN+YA+ GNW +++R MK + K+PGCS+I+++ +HEF+ D HPK+++I
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINS 541
Query: 515 MLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVK 574
ML E++ +L+ GY P T VL ++ EE KE L HSEK+A AFGLIST PG I+IVK
Sbjct: 542 MLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVK 601
Query: 575 NLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
NLR+C DCHS +K++SK+ RKI RDR RFHHF++GSCSC DYW
Sbjct: 602 NLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/673 (36%), Positives = 374/673 (55%), Gaps = 82/673 (12%)
Query: 26 AALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNV 85
A+LID + GL L KL + SS G + + +F+ P P +
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 86 FLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCH 138
F W +II +S H AL Y+ M V P++FTF +L C+ LQ R +H
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 139 VIKFAVASAPYVSTGL---------------------------------VGAYARGGDVF 165
V + + +V GL V AYA+ G+
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 166 SAEKVFDEMSER-------SLVSVTAMLTC------------------------------ 188
A ++F +M + +LVSV TC
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 189 --YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
YAK G++ A++LF+ M+ S +++ WN MI YA+NG E + +F +M+ + VRPD
Sbjct: 265 TMYAKCGQVATAKILFDKMK--SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
I++ + +S+C Q+G+LE R ++ YVG +V + +AL+DM+ KCGS++ AR +FD
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
+DRDVV W++MI+GY +HG + EA+ L+ M GV P+DVTF+ +L AC HSG+V +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
GW FN M + + + P+ +H+ C+++LLGRAG L++ Y++++ M P +WG LL AC
Sbjct: 443 GWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 427 RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPG 486
+ H++V LGE A+ + S + +++G YV LSN+YAA+ W A+VR MK G+ K+ G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 487 CSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKEL 546
CS +EV R+ F GD HP+ ++I +E + RLK G+ D LHD+ +E+ E
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEE 621
Query: 547 SLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFH 606
+L HSE++A+A+GLIST GT ++I KNLR C++CH+ K++SK+ R+I+ RD NRFH
Sbjct: 622 TLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFH 681
Query: 607 HFENGSCSCGDYW 619
HF++G CSCGDYW
Sbjct: 682 HFKDGVCSCGDYW 694
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/578 (41%), Positives = 354/578 (61%), Gaps = 11/578 (1%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYAR 107
D H + +F + S +L ++ + +R+ P +F S+I AH S +++ FY R
Sbjct: 37 DDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRR 96
Query: 108 MLA--QPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
+L+ ++P+ +T + ++ C + +H I+ + P+V TGL+ YA
Sbjct: 97 ILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAEL 156
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G + S KVF+ + V TAM+T A+ G + AR LFEGM RD + WN MI
Sbjct: 157 GCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP--ERDPIAWNAMISG 214
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
YAQ G E L +F M E V+ + + +++VLS+C QLGAL+ GRW HSY+ +K +
Sbjct: 215 YAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT 274
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
VR+ T LVD+Y KCG ++ A ++F + +++V W+S + G A++G+ E+ L LF M
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
GV P+ VTFV+VL C G V +G F+ M+N +G+EP++EH+GC+V+L RAGRLE
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
+ +++ M P + +W +LL A R++KN+ LG ++ +L A+ G YVLLSNIYA
Sbjct: 395 DAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYA 454
Query: 462 ASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNC 521
S +W + VR MK GV K+PGCS++EVN +HEF GD HPK I + ++++
Sbjct: 455 DSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISR 514
Query: 522 RLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLD 581
RL+ GY T V+ DI EE+KE +L +HSEK A+AFG++S + I+IVKNLRVC D
Sbjct: 515 RLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGD 574
Query: 582 CHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
CH V M+SKI R+II RDRNRFHHF++G CSC +W
Sbjct: 575 CHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 75/315 (23%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPN-----------------VF--- 86
RRG D P + L Y+ +G L +FN P P+ VF
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 87 -----------LWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
W ++I ++ S +AL+ + M + V+ N SVL C
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
L R H ++ + + ++T LV YA+ GD+ A +VF M E
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE------------ 303
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
++V W+ ++ A NG +CL LF M + V P+ +
Sbjct: 304 ---------------------KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAV 342
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG--TALVDMYCKCGSLDDARKIFD 306
T ++VL C +G ++ G+ + N + G+E ++ LVD+Y + G L+DA I
Sbjct: 343 TFVSVLRGCSVVGFVDEGQRHFDSMRN-EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 307 NIVDRDVVA-WNSMI 320
+ + A W+S++
Sbjct: 402 QMPMKPHAAVWSSLL 416
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 347/565 (61%), Gaps = 11/565 (1%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y S G L + +F +V W S+I+ D+AL + +M ++ V+ + T
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
VL C NL+ R + ++ + V ++ ++ Y + G + A+++FD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ V+ T ML YA AR + M +D+V WN +I Y QNG PNE L++F
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSM--PQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 237 KM-LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
++ L + ++ ++ITL++ LS+C Q+GALE GRWIHSY+ H + V +AL+ MY KC
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G L+ +R++F+++ RDV W++MI G A+HG EA+ +F +M VKP+ VTF V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC H+GLV + +F+ M++ YG+ P+ +H+ C+V++LGR+G LE+ + M P
Sbjct: 474 CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 533
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+ +WG LL AC++H N++L E +L + G +VLLSNIYA G W +++R
Sbjct: 534 TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKH 593
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLV 535
M+ +G++KEPGCS IE++ IHEF++GD HP S+ +Y L E+ +LK+NGY P+ V
Sbjct: 594 MRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQV 653
Query: 536 LHDIGEEQ-KELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
L I EE+ KE SL +HSEKLA+ +GLIST I+++KNLRVC DCHSV K++S++
Sbjct: 654 LQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYD 713
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
R+II RDR RFHHF NG CSC D+W
Sbjct: 714 REIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 205/451 (45%), Gaps = 77/451 (17%)
Query: 21 EVERLAALIDRSKSXXXXXXXXXXXXRRGL--DPHPILNFKLQRSYSSVGHLHHSVTLFN 78
E R +LI+R S R G DP+ + SS L ++ +F+
Sbjct: 29 ERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFD 88
Query: 79 RTPTPNVFLWTSIIHAH-SHSDQALSFYA--RMLAQP-VEPNAFTFSSVLHGC----NLQ 130
P PN F W ++I A+ S D LS +A M+++ PN +TF ++ +L
Sbjct: 89 EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS 148
Query: 131 AARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYA 190
+++H +K AV S +V+ L+ Y GD+ SA KVF + E+ +VS +M+ +
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 191 KHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
+ G P++ L LF+KM +E V+ +T+
Sbjct: 209 QKGS---------------------------------PDKALELFKKMESEDVKASHVTM 235
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+ VLS+C ++ LE GR + SY+ ++ V + + A++DMY KCGS++DA+++FD + +
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 311 RDVVAWNSMIMGYAI-------------------------------HGYSEEALRLFDEM 339
+D V W +M+ GYAI +G EAL +F E+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 340 -CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
+K + +T V+ L+AC G + G I + +K +G+ ++++ + G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCG 414
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
LE+ ++ ++ D +W ++ +H
Sbjct: 415 DLEKSREVFNSVEKR-DVFVWSAMIGGLAMH 444
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 344/572 (60%), Gaps = 49/572 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQAL---SFYARMLAQPVEPNAFTF 120
YS+ G L + +F+ P N+ WTS+I + + AL S + +L + + F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 121 ------SSVLHGCNLQAAR----AIHCHVIKFAVASAPYVSTGLVGAYARGGD--VFSAE 168
SV+ C+ A+ +IH VIK V L+ AYA+GG+ V A
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVAR 240
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
K+FD++ ++ D V +N ++ YAQ+GM
Sbjct: 241 KIFDQIVDK---------------------------------DRVSYNSIMSVYAQSGMS 267
Query: 229 NECLLLFRKMLAEKVRP-DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
NE +FR+++ KV + ITL VL + GAL G+ IH V +V VGT+
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
++DMYCKCG ++ ARK FD + +++V +W +MI GY +HG++ +AL LF M GV+P+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
+TFV+VL AC H+GL +GW FN MK +G+EP +EH+GCMV+LLGRAG L++ YDL+
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWV 467
+ MK PDS++W +LL ACR+HKNV L E + + ++ G Y+LLS+IYA +G W
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 468 GAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANG 527
+VR +MK G+ K PG S++E+N +H F+ GD HP+ + IY L E+N +L G
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 528 YTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMK 587
Y T V HD+ EE+KE++L VHSEKLA+AFG+++T PG+T+ +VKNLRVC DCH+V+K
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 588 MMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
++SKI R+ + RD RFHHF++G CSCGDYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
S+++L + L +H + LF D DV WN +I + A++G E LL
Sbjct: 5 SKKALFCSVSRLLHTERHTERQNLTTLFNRY-VDKTDVFSWNSVIADLARSGDSAEALLA 63
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F M + P + + +C L + SG+ H ++ V +AL+ MY
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST 123
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF--- 351
CG L+DARK+FD I R++V+W SMI GY ++G + +A+ LF ++ D F
Sbjct: 124 CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 352 ---VAVLTACG-----------HSGLVSKGWE 369
V+V++AC HS ++ +G++
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/560 (40%), Positives = 335/560 (59%), Gaps = 37/560 (6%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
YS G + LF P++ + ++IH ++ ++ +LS + ++ + T
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 121 SSVLH-GCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
S++ +L AIH + +K S VST
Sbjct: 326 VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVST--------------------------- 358
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
A+ T Y+K + AR LF+ E+ + + WN MI Y QNG+ + + LFR+M
Sbjct: 359 ----ALTTVYSKLNEIESARKLFD--ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ P+ +T+ +LS+C QLGAL G+W+H V + + V TAL+ MY KCGS+
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
+AR++FD + ++ V WN+MI GY +HG +EAL +F EM G+ P+ VTF+ VL AC
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLW 419
H+GLV +G EIFN M + YG EP ++H+ CMV++LGRAG L+ + M +P S +W
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVW 592
Query: 420 GTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGS 479
TLL ACR+HK+ +L ++E + + + G +VLLSNI++A N+ AA VR K
Sbjct: 593 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 652
Query: 480 GVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDI 539
+ K PG ++IE+ H F +GD HP+ ++IY LE++ +++ GY P+T+L LHD+
Sbjct: 653 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 712
Query: 540 GEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIIT 599
EE++EL ++VHSE+LA+AFGLI+T PGT I+I+KNLRVCLDCH+V K++SKIT R I+
Sbjct: 713 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 772
Query: 600 RDRNRFHHFENGSCSCGDYW 619
RD NRFHHF++G CSCGDYW
Sbjct: 773 RDANRFHHFKDGVCSCGDYW 792
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 191/459 (41%), Gaps = 75/459 (16%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARML-AQPVE 114
KL + S +G ++++ +F P+VFL+ ++ S ++ +LS +A + + ++
Sbjct: 57 KLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLK 116
Query: 115 PNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
PN+ T++ + + +A R IH + S + + +V Y + V A KV
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
FD M E +D + WN MI Y +N M E
Sbjct: 177 FDRMPE---------------------------------KDTILWNTMISGYRKNEMYVE 203
Query: 231 CLLLFRKMLAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
+ +FR ++ E R D TLL +L + +L L G IHS V T +
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
+Y KCG + +F D+VA+N+MI GY +G +E +L LF E+ G +
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 350 TFVAVLTACGH----------------------SGLVSKGWEIFNLMKNGYGM-----EP 382
T V+++ GH S ++ + N +++ + E
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLLWACRLHKNVSLGEEIA 439
+ + M++ + G E+ L R M+ P+ V +L AC +SLG+ +
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 440 EFILSHNLASSGTYV--LLSNIYAASGNWVGAAKVRSLM 476
+ + S + SS YV L +YA G+ A ++ LM
Sbjct: 444 DLVRSTDFESS-IYVSTALIGMYAKCGSIAEARRLFDLM 481
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 44/284 (15%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARML 109
H ++ L YS + + + LF+ +P ++ W ++I ++ ++ A+S + M
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 110 AQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
PN T + +L C L + +H V S+ YVST L+G YA+ G +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
A ++FD M++++ V+ M++ Y HG+ +EA
Sbjct: 473 EARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA--------------------------- 505
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VR 283
L +F +ML + P +T L VL +C G ++ G I + + H+ G E V+
Sbjct: 506 ------LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM-IHRYGFEPSVK 558
Query: 284 VGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIH 326
+VD+ + G L A + + + ++ W +++ IH
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/569 (40%), Positives = 346/569 (60%), Gaps = 42/569 (7%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPN 116
L + Y+S G++ ++ LF+ P +V W ++I ++ + +AL + M+ V P+
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
T +V+ C +++ R +H + S
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS-------------------------- 299
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
+L V A++ Y+K G L A LFE + +DV+ WN +I Y + E L
Sbjct: 300 -----NLKIVNALIDLYSKCGELETACGLFERLPY--KDVISWNTLIGGYTHMNLYKEAL 352
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVD 290
LLF++ML P+++T+L++L +C LGA++ GRWIH Y+ GV + T+L+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
MY KCG ++ A ++F++I+ + + +WN+MI G+A+HG ++ + LF M +G++P D+T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM 410
FV +L+AC HSG++ G IF M Y M PK+EH+GCM++LLG +G +E +++ M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 411 KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAA 470
+ +PD V+W +LL AC++H NV LGE AE ++ + G+YVLLSNIYA++G W A
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTP 530
K R+L+ G++K PGCS IE+++ +HEFI GD HP++++IY MLEEM L+ G+ P
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVP 652
Query: 531 KTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMS 590
T VL ++ EE KE +L HSEKLA+AFGLIST+PGT + IVKNLRVC +CH K++S
Sbjct: 653 DTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLIS 712
Query: 591 KITGRKIITRDRNRFHHFENGSCSCGDYW 619
KI R+II RDR RFHHF +G CSC DYW
Sbjct: 713 KIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 198/368 (53%), Gaps = 11/368 (2%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHG 126
L +++++F PN+ +W ++ H+ S AL Y M++ + PN++TF VL
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 127 CN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSV 182
C + + IH HV+K YV T L+ Y + G + A KVFD+ R +VS
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
TA++ YA G + A+ LF+ E +DVV WN MI YA+ G E L LF+ M+
Sbjct: 204 TALIKGYASRGYIENAQKLFD--EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
VRPDE T++ V+S+C Q G++E GR +H ++ +H G +++ AL+D+Y KCG L+ A
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
+F+ + +DV++WN++I GY +EAL LF EM G P+DVT +++L AC H G
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 363 LVSKG-WEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
+ G W + K G+ ++++ + G +E + + + S W
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNA 440
Query: 422 LLWACRLH 429
+++ +H
Sbjct: 441 MIFGFAMH 448
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/551 (41%), Positives = 344/551 (62%), Gaps = 19/551 (3%)
Query: 86 FLWTSIIHAHSHS------DQALSFYARMLAQPVEPNAFTFSSVL----HGCNLQAARAI 135
FLW II A H+ +S Y RM V P+ TF +L + +L +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H ++ F + P+V T L+ Y+ GD+ SA++VFD+ + L + +++ YAK G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK-----VRPDEITL 250
+AR LF+ E R+V+ W+ +I+ Y G E L LFR+M K VRP+E T+
Sbjct: 145 DDARKLFD--EMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI-V 309
VLS+CG+LGALE G+W+H+Y+ + +++ +GTAL+DMY KCGSL+ A+++F+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFVAVLTACGHSGLVSKGW 368
+DV A+++MI A++G ++E +LF EM + P+ VTFV +L AC H GL+++G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
F +M +G+ P I+H+GCMV+L GR+G ++E + M +PD ++WG+LL R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 429 HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
++ E + ++ + +SG YVLLSN+YA +G W+ +R M+ G+ K PGCS
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 489 IIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSL 548
+EV +HEF+ GD +S+ IY ML+E+ RL+ GY T VL D+ E+ KE++L
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIAL 502
Query: 549 EVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHF 608
HSEKLA+AF L+ TRPGT ++I+KNLR+C DCH VMKM+SK+ R+I+ RD NRFHHF
Sbjct: 503 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHF 562
Query: 609 ENGSCSCGDYW 619
+GSCSC D+W
Sbjct: 563 RDGSCSCRDFW 573
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 49/281 (17%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARM-LAQP----VE 114
+Y+ G + + LF+ P NV W+ +I+ + +AL + M L +P V
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 115 PNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
PN FT S+VL C L+ + +H ++ K+ V + T L+ YA+ G + A++V
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 171 FDEM-SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
F+ + S++ + + +AM+ C A + G+ +
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMY---------------------------------GLTD 283
Query: 230 ECLLLFRKM-LAEKVRPDEITLLAVLSSCGQLGALESGR-WIHSYVGNHKNGVEVRVGTA 287
EC LF +M ++ + P+ +T + +L +C G + G+ + + ++
Sbjct: 284 ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 288 LVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHG 327
+VD+Y + G + +A ++ ++ DV+ W S++ G + G
Sbjct: 344 MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/561 (40%), Positives = 341/561 (60%), Gaps = 44/561 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y+ G + + LF+ +P +VF WT+++ + + ++A + +M E N ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSW 315
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV 180
+++L G Y +G + A+++FD M R++
Sbjct: 316 NAMLAG-------------------------------YVQGERMEMAKELFDVMPCRNVS 344
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
+ M+T YA+ G++ EA+ LF+ M RD V W MI Y+Q+G E L LF +M
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMP--KRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 241 EKVRPDEITLLAVLSSCGQLGALESGRWIHSYV--GNHKNGVEVRVGTALVDMYCKCGSL 298
E R + + + LS+C + ALE G+ +H + G ++ G VG AL+ MYCKCGS+
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC--FVGNALLLMYCKCGSI 460
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
++A +F + +D+V+WN+MI GY+ HG+ E ALR F+ M G+KP D T VAVL+AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
H+GLV KG + F M YG+ P +H+ CMV+LLGRAG LE+ ++L++ M +PD+ +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 419 WGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKG 478
WGTLL A R+H N L E A+ I + +SG YVLLSN+YA+SG W K+R M+
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 479 SGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHD 538
GV+K PG S IE+ N+ H F GD HP+ +I+ LEE++ R+K GY KT +VLHD
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 539 IGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKII 598
+ EE+KE + HSE+LA+A+G++ G I+++KNLRVC DCH+ +K M++ITGR II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 599 TRDRNRFHHFENGSCSCGDYW 619
RD NRFHHF++GSCSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 55/305 (18%)
Query: 152 TGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRD 211
G++ Y R G+ A K+FDEM ER LVS M+ Y ++ L +AR LFE M RD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP--ERD 156
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHS 271
V WN M+ YAQNG ++ +F +M EK ++++ A+LS+ Q +E +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRM-PEK---NDVSWNALLSAYVQNSKMEEACML-- 210
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCG------SLDDARKIFDNIVDRDVVAWNSMIMGYAI 325
+ R ALV C G + +AR+ FD++ RDVV+WN++I GYA
Sbjct: 211 --------FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-----------NLM 374
G +EA +LFDE V T+ A+++ + +V + E+F N M
Sbjct: 263 SGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318
Query: 375 KNGYGMEPKIE---------------HFGCMVNLLGRAGRLEEGYDLVRGM-KTDPDSVL 418
GY ++E + M+ + G++ E +L M K DP V
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP--VS 376
Query: 419 WGTLL 423
W ++
Sbjct: 377 WAAMI 381
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
D+ WNV I Y + G NE L +F++M R ++ ++S + G E R +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
+ ++ ++ Y + +L AR++F+ + +RDV +WN+M+ GYA +G +
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
+A +FD M + +DV++ A+L+A + + + +F +N + + C+
Sbjct: 175 DARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW-----ALVSWNCL 225
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ + ++ E M D V W T++
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNV-RDVVSWNTII 257
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 345/558 (61%), Gaps = 10/558 (1%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTFSSVLHG 126
L ++ +F++ PN+F++ +I S +A FY +ML + P+ TF ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 127 CN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSV 182
+ + H +++F + YV LV YA G + +A ++F +M R +VS
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
T+M+ Y K G + AR +F+ E R++ W++MI+ YA+N + + LF M E
Sbjct: 187 TSMVAGYCKCGMVENAREMFD--EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
V +E +++V+SSC LGALE G + YV V + +GTALVDM+ +CG ++ A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
+F+ + + D ++W+S+I G A+HG++ +A+ F +M +G P DVTF AVL+AC H G
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
LV KG EI+ MK +G+EP++EH+GC+V++LGRAG+L E + + M P++ + G L
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGAL 424
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
L AC+++KN + E + ++ SG YVLLSNIYA +G W +R +MK V+
Sbjct: 425 LGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 483 KEPGCSIIEVNNRIHEFIAG-DLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGE 541
K PG S+IE++ +I++F G D +HP+ I EE+ +++ GY T D+ E
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
Query: 542 EQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRD 601
E+KE S+ +HSEKLA+A+G++ T+PGTTI+IVKNLRVC DCH+V K++S++ GR++I RD
Sbjct: 545 EEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRD 604
Query: 602 RNRFHHFENGSCSCGDYW 619
RNRFHHF NG CSC DYW
Sbjct: 605 RNRFHHFRNGVCSCRDYW 622
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G + ++ +F+ P N+F W+ +I+ ++ + ++A+ + M + V N
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
SV+ C L+ + +V+K + + T LV + R GD+ A VF+ + E
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+S W+ +I A +G ++ + F
Sbjct: 313 TDSLS---------------------------------WSSIIKGLAVHGHAHKAMHYFS 339
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG--TALVDMYCK 294
+M++ P ++T AVLS+C G +E G I+ + +G+E R+ +VDM +
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM-KKDHGIEPRLEHYGCIVDMLGR 398
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGY-----AIHGYSEEALRLFDEMCGMGVKPSDV 349
G L +A +N + + V N+ I+G I+ +E A R+ + + + VKP
Sbjct: 399 AGKLAEA----ENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML--IKVKPEHS 452
Query: 350 TFVAVLT 356
+ +L+
Sbjct: 453 GYYVLLS 459
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/563 (40%), Positives = 332/563 (58%), Gaps = 44/563 (7%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQAL---SFYARMLAQPVEPNAFTFS 121
SS+ + H LF P++ ++ S+ +S L S + +L + P+ +TF
Sbjct: 77 SSMSYARH---LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 122 SVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
S+L C L+ R +HC +K + YV L+ Y DV SA VFD + E
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
+V AM+T YA+ R PNE L LFR+
Sbjct: 194 CVVCYNAMITGYARRNR---------------------------------PNEALSLFRE 220
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
M + ++P+EITLL+VLSSC LG+L+ G+WIH Y H V+V TAL+DM+ KCGS
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
LDDA IF+ + +D AW++MI+ YA HG +E+++ +F+ M V+P ++TF+ +L A
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H+G V +G + F+ M + +G+ P I+H+G MV+LL RAG LE+ Y+ + + P +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
LW LL AC H N+ L E+++E I + + G YV+LSN+YA + W +R +MK
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
K PGCS IEVNN +HEF +GD + ++ L+EM LK +GY P T +V+H
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVH 520
Query: 538 -DIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRK 596
++ +++KE++L HSEKLA+ FGL++T PGTTI++VKNLRVC DCH+ K++S I GRK
Sbjct: 521 ANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRK 580
Query: 597 IITRDRNRFHHFENGSCSCGDYW 619
++ RD RFHHFE+G CSCGD+W
Sbjct: 581 VVLRDVQRFHHFEDGKCSCGDFW 603
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/575 (41%), Positives = 336/575 (58%), Gaps = 39/575 (6%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
G P L L Y L+ + LF++ P NV WT++I A+S +AL
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN-LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
ML V PN +T+SSVL CN + R +HC +IK + S +V + L+ +A+ G+
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
A VFDEM VT D + WN +I +AQ
Sbjct: 211 EDALSVFDEM-------VTG--------------------------DAIVWNSIIGGFAQ 237
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
N + L LF++M ++ TL +VL +C L LE G H ++ + ++ +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLIL 295
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
ALVDMYCKCGSL+DA ++F+ + +RDV+ W++MI G A +GYS+EAL+LF+ M G
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
KP+ +T V VL AC H+GL+ GW F MK YG++P EH+GCM++LLG+AG+L++
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 405 DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASG 464
L+ M+ +PD+V W TLL ACR+ +N+ L E A+ +++ + +GTY LLSNIYA S
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 465 NWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
W ++R+ M+ G++KEPGCS IEVN +IH FI GD HP+ ++ L ++ RL
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 535
Query: 525 ANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHS 584
GY P+T+ VL D+ EQ E SL HSEKLALAFGL++ I+I KNLR+C DCH
Sbjct: 536 GIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHV 595
Query: 585 VMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
K+ SK+ R I+ RD R+HHF++G CSCGDYW
Sbjct: 596 FCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 46/284 (16%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALS 103
+ GL+ + L ++ +G ++++F+ T + +W SII +S SD AL
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ RM T +SVL C L+ H H++K+ ++ LV Y
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYC 304
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + A +VF++M ER +++ + M++ A++G
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNG-------------------------- 338
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y+Q E L LF +M + +P+ IT++ VL +C G LE G W + G
Sbjct: 339 --YSQ-----EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYG 390
Query: 280 VE-VRVGTA-LVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMI 320
++ VR ++D+ K G LDDA K+ + + + D V W +++
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 246 DEITLLAVLSSCGQLGALESGRWI--HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
D T ++ C A+ G I H Y H+ + + L++MY K L+DA +
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP--MMFLVNVLINMYVKFNLLNDAHQ 117
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG---- 359
+FD + R+V++W +MI Y+ ++AL L M V+P+ T+ +VL +C
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 360 ----HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
H G++ +G E +++ ++++ + G E+ + M T D
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSA------------LIDVFAKLGEPEDALSVFDEMVTG-D 224
Query: 416 SVLWGTLL 423
+++W +++
Sbjct: 225 AIVWNSII 232
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/551 (40%), Positives = 324/551 (58%), Gaps = 40/551 (7%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVL----HGCN 128
+F P +V + +II ++ S + AL M ++P++FT SSVL +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
+ + IH +VI+ + S Y+ + LV YA+ + +E+VF L C
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR------------LYC 305
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
RD + WN ++ Y QNG NE L LFR+M+ KV+P +
Sbjct: 306 ---------------------RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
+V+ +C L L G+ +H YV G + + +ALVDMY KCG++ ARKIFD +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
D V+W ++IMG+A+HG+ EA+ LF+EM GVKP+ V FVAVLTAC H GLV + W
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
FN M YG+ ++EH+ + +LLGRAG+LEE Y+ + M +P +W TLL +C +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 429 HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
HKN+ L E++AE I + + + G YVL+ N+YA++G W AK+R M+ G+ K+P CS
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584
Query: 489 IIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSL 548
IE+ N+ H F++GD HP I L+ + +++ GY T VLHD+ EE K L
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELL 644
Query: 549 EVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHF 608
HSE+LA+AFG+I+T PGTTI++ KN+R+C DCH +K +SKIT R+II RD +RFHHF
Sbjct: 645 FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHF 704
Query: 609 ENGSCSCGDYW 619
G+CSCGDYW
Sbjct: 705 NRGNCSCGDYW 715
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 184/380 (48%), Gaps = 24/380 (6%)
Query: 77 FNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGC----NL 129
F +P V W S+I + +AL+ + M A P+ F SVL C +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 130 QAARAIHCHVIKFAVASAPYVSTGLVGAYAR---GGDVFSAEKVFDEMSERSLVSVTAML 186
+ ++H +++ + Y L+ YA+ G S VFDEM +R+ S +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 187 ---TCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV 243
TC G + R +FE M +DVV +N +I YAQ+GM + L + R+M +
Sbjct: 182 KAETCIMPFG-IDSVRRVFEVMP--RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 244 RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
+PD TL +VL + + G+ IH YV +V +G++LVDMY K ++D+ +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGL 363
+F + RD ++WNS++ GY +G EALRLF +M VKP V F +V+ AC H
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 364 VSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
+ G ++ +++ G+G I +V++ + G ++ + M D V W +
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAI 415
Query: 423 LWACRL----HKNVSLGEEI 438
+ L H+ VSL EE+
Sbjct: 416 IMGHALHGHGHEAVSLFEEM 435
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 139/302 (46%), Gaps = 42/302 (13%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
R+G+D + L Y+ + S +F+R + W S++ + + ++AL
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ +M+ V+P A FSSV+ C L + +H +V++ S ++++ LV Y+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ +A K+FD M+ VS TA++ +A HG EA LFE M+
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK------------- 436
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL-ESGRWIHSYVGNHKN 278
+ V+P+++ +AVL++C +G + E+ + +S +
Sbjct: 437 --------------------RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
E+ A+ D+ + G L++A + V+ W++++ ++H E A ++ +
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 338 EM 339
++
Sbjct: 537 KI 538
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 348/586 (59%), Gaps = 15/586 (2%)
Query: 47 RRGLDPHPILNFKLQRSYSSVG--HLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQA 101
R+GLD + KL R+ + +G ++ + N FLWT++I ++ D+A
Sbjct: 74 RKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEA 133
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGA 157
++ Y M + + P +FTFS++L C +L R H + YV ++
Sbjct: 134 IAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDM 193
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
Y + + A KVFDEM ER ++S T ++ YA+ G + A LFE + ++D+V W
Sbjct: 194 YVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP--TKDMVAWTA 251
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALE-SGRWIH-SYVGN 275
M+ +AQN P E L F +M +R DE+T+ +S+C QLGA + + R + +
Sbjct: 252 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 311
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+ V +G+AL+DMY KCG++++A +F ++ +++V ++SMI+G A HG ++EAL L
Sbjct: 312 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 371
Query: 336 FDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL 394
F M +KP+ VTFV L AC HSGLV +G ++F+ M +G++P +H+ CMV+LL
Sbjct: 372 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 431
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV 454
GR GRL+E +L++ M +P +WG LL ACR+H N + E AE + G Y+
Sbjct: 432 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYI 491
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS-IIEVNNRIHEFIAGDLRHPKSQDIY 513
LLSN+YA++G+W G +VR L+K G++K P S +++ N ++H+F G+L HP S I
Sbjct: 492 LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQ 551
Query: 514 LMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIV 573
LEE+ RL GY P V +D+ + K L L H+EKLALAF L++T +TI I+
Sbjct: 552 DKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIM 611
Query: 574 KNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
KNLR+CLDCH M++ S++TG+ II RD RFHHF +G CSCGD+W
Sbjct: 612 KNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 339/611 (55%), Gaps = 47/611 (7%)
Query: 56 LNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQP 112
L KL R+Y+S+ + + +F+ P NV + +I ++ ++ + + + M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 113 VEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
V P+ +TF VL C+ + R IH K ++S +V GLV Y + G + A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEA--------------------- 207
V DEMS R +VS +++ YA++ R +A + ME+
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 208 --------------DSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAV 253
+ +V WNVMI Y +N MP E + L+ +M A+ PD +++ +V
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 254 LSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDV 313
L +CG AL G+ IH Y+ K + + AL+DMY KCG L+ AR +F+N+ RDV
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 314 VAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL 373
V+W +MI Y G +A+ LF ++ G+ P + FV L AC H+GL+ +G F L
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 374 MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVS 433
M + Y + P++EH CMV+LLGRAG+++E Y ++ M +P+ +WG LL ACR+H +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 434 LGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVN 493
+G A+ + SG YVLLSNIYA +G W +R++MK G++K PG S +EVN
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 494 NRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSE 553
IH F+ GD HP+S +IY L+ + ++K GY P ++ LHD+ EE KE L VHSE
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 615
Query: 554 KLALAFGLISTR-----PGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHF 608
KLA+ F L++T+ TI+I KNLR+C DCH K++S+IT R+II RD NRFH F
Sbjct: 616 KLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVF 675
Query: 609 ENGSCSCGDYW 619
G CSCGDYW
Sbjct: 676 RFGVCSCGDYW 686
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 237 KMLAEKVRPDEITLL--AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
K+ ++ P E L VL + + L R +HS + +G L+ Y
Sbjct: 30 KLELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYAS 86
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
+ ARK+FD I +R+V+ N MI Y +G+ E +++F MCG V+P TF V
Sbjct: 87 LKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV 146
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L AC SG + G +I G+ + +V++ G+ G L E LV +
Sbjct: 147 LKACSCSGTIVIGRKIHG-SATKVGLSSTLFVGNGLVSMYGKCGFLSEAR-LVLDEMSRR 204
Query: 415 DSVLWGTLL 423
D V W +L+
Sbjct: 205 DVVSWNSLV 213
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 337/557 (60%), Gaps = 49/557 (8%)
Query: 76 LFNRTPTP-NVFLWTSIIHAHS---HSDQALSFYARM-LAQPVEPNAFTFSSVLHGCNLQ 130
+F++ P NVF+W ++I ++ +S A S Y M ++ VEP+ T+ ++
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 131 A----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAML 186
A IH VI+ S YV L+ YA GDV SA KVFD+M E+
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK--------- 185
Query: 187 TCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
D+V WN +I+ +A+NG P E L L+ +M ++ ++PD
Sbjct: 186 ------------------------DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 221
Query: 247 EITLLAVLSSCGQLGALESGRWIHSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
T++++LS+C ++GAL G+ +H Y VG +N + L+D+Y +CG +++A+
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN---LHSSNVLLDLYARCGRVEEAKT 278
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM-CGMGVKPSDVTFVAVLTACGHSG 362
+FD +VD++ V+W S+I+G A++G+ +EA+ LF M G+ P ++TFV +L AC H G
Sbjct: 279 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
+V +G+E F M+ Y +EP+IEHFGCMV+LL RAG++++ Y+ ++ M P+ V+W TL
Sbjct: 339 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
L AC +H + L E IL SG YVLLSN+YA+ W K+R M GV+
Sbjct: 399 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 458
Query: 483 KEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEE 542
K PG S++EV NR+HEF+ GD HP+S IY L+EM RL++ GY P+ V D+ EE
Sbjct: 459 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEE 518
Query: 543 QKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDR 602
+KE ++ HSEK+A+AF LIST + I +VKNLRVC DCH +K++SK+ R+I+ RDR
Sbjct: 519 EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDR 578
Query: 603 NRFHHFENGSCSCGDYW 619
+RFHHF+NGSCSC DYW
Sbjct: 579 SRFHHFKNGSCSCQDYW 595
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y++ G + + +F++ P ++ W S+I+ + + ++AL+ Y M ++ ++P+ FT
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+L C L + +H ++IK + + S L+ YAR G V A+ +FDEM +
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
++ VS T+++ A +G +EA LF+ ME+
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMES----------------------------- 316
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
E + P EIT + +L +C G ++ G + +K + +VD+ +
Sbjct: 317 ---TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 296 GSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEA 332
G + A + ++ + +VV W +++ +HG S+ A
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/580 (38%), Positives = 327/580 (56%), Gaps = 41/580 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
R G D ++ L Y+ G L + LF+ NV W S+I A+ ++ +A+
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ +ML + V+P + LH C +L+ R IH ++ + V L+ Y
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ +V +A +F ++ R+LVS WN MI
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVS---------------------------------WNAMI 410
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+AQNG P + L F +M + V+PD T ++V+++ +L +WIH V
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
V V TALVDMY KCG++ AR IFD + +R V WN+MI GY HG+ + AL LF+EM
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
+KP+ VTF++V++AC HSGLV G + F +MK Y +E ++H+G MV+LLGRAGR
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
L E +D + M P ++G +L AC++HKNV+ E+ AE + N G +VLL+NI
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 460 YAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
Y A+ W +VR M G+ K PGCS++E+ N +H F +G HP S+ IY LE++
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Query: 520 NCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVC 579
C +K GY P T+LVL + + KE L HSEKLA++FGL++T GTTI + KNLRVC
Sbjct: 711 ICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVC 769
Query: 580 LDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
DCH+ K +S +TGR+I+ RD RFHHF+NG+CSCGDYW
Sbjct: 770 ADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 168/355 (47%), Gaps = 40/355 (11%)
Query: 26 AALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNV 85
A L++R S + GL KL + G + + +F +
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 86 FLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCH 138
L+ +++ S D+AL F+ RM VEP + F+ +L C L+ + IH
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH-- 158
Query: 139 VIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREA 198
G + G FS + L ++T + YAK ++ EA
Sbjct: 159 -----------------GLLVKSG--FSLD----------LFAMTGLENMYAKCRQVNEA 189
Query: 199 RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCG 258
R +F+ M RD+V WN ++ Y+QNGM L + + M E ++P IT+++VL +
Sbjct: 190 RKVFDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 259 QLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNS 318
L + G+ IH Y V + TALVDMY KCGSL+ AR++FD +++R+VV+WNS
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 319 MIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL 373
MI Y + +EA+ +F +M GVKP+DV+ + L AC G + +G I L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 12/253 (4%)
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
T +++ + ++G + EA +FE + DS+ V ++ M+ +A+ ++ L F +M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPI--DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
V P +L CG L G+ IH + +++ T L +MY KC +++AR
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
K+FD + +RD+V+WN+++ GY+ +G + AL + MC +KPS +T V+VL A
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHF----GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
L+S G EI +GY M + +V++ + G LE L GM + + V
Sbjct: 251 LISVGKEI-----HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVS 304
Query: 419 WGTLLWACRLHKN 431
W +++ A ++N
Sbjct: 305 WNSMIDAYVQNEN 317
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/481 (42%), Positives = 311/481 (64%), Gaps = 7/481 (1%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSFYAR 107
D + F+L R S++ + ++ +F+ PNV+L+T++I + S +S Y R
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 108 MLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
M+ V P+ + +SVL C+L+ R IH V+K S+ V ++ Y + G++ +A
Sbjct: 118 MIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNA 177
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
+K+FDEM +R V+ T M+ CY++ G ++EA LF+ ++ +D VCW MID +N
Sbjct: 178 KKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKI--KDTVCWTAMIDGLVRNKE 235
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
N+ L LFR+M E V +E T + VLS+C LGALE GRW+HS+V N + + VG A
Sbjct: 236 MNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNA 295
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
L++MY +CG +++AR++F + D+DV+++N+MI G A+HG S EA+ F +M G +P+
Sbjct: 296 LINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPN 355
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
VT VA+L AC H GL+ G E+FN MK + +EP+IEH+GC+V+LLGR GRLEE Y +
Sbjct: 356 QVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFI 415
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWV 467
+ +PD ++ GTLL AC++H N+ LGE+IA+ + SGTYVLLSN+YA+SG W
Sbjct: 416 ENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWK 475
Query: 468 GAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN--CRLKA 525
+ ++R M+ SG+EKEPGCS IEV+N+IHEF+ GD+ HP + IY L+E+N R K
Sbjct: 476 ESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKE 535
Query: 526 N 526
N
Sbjct: 536 N 536
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/581 (38%), Positives = 342/581 (58%), Gaps = 19/581 (3%)
Query: 54 PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLA 110
P + Y+S G ++++ +F+ +V W ++I + D+A + M
Sbjct: 146 PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD 205
Query: 111 QPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFS 166
V P+ +++ C N++ RAI+ +I+ V ++ T LV YA G +
Sbjct: 206 SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDM 265
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
A + F +MS R+L TAM++ Y+K GRL +A+++F+ + + +D+VCW MI Y ++
Sbjct: 266 AREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD--QTEKKDLVCWTTMISAYVESD 323
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRV 284
P E L +F +M ++PD +++ +V+S+C LG L+ +W+HS + H NG+E + +
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI--HVNGLESELSI 381
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
AL++MY KCG LD R +F+ + R+VV+W+SMI ++HG + +AL LF M V
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
+P++VTFV VL C HSGLV +G +IF M + Y + PK+EH+GCMV+L GRA L E
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 405 DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASG 464
+++ M + V+WG+L+ ACR+H + LG+ A+ IL G VL+SNIYA
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQ 561
Query: 465 NWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
W +R +M+ V KE G S I+ N + HEF+ GD RH +S +IY L+E+ +LK
Sbjct: 562 RWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Query: 525 ANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGT------TIKIVKNLRV 578
GY P VL D+ EE+K+ + HSEKLAL FGL++ I+IVKNLRV
Sbjct: 622 LAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRV 681
Query: 579 CLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
C DCH K++SK+ R+II RDR RFH ++NG CSC DYW
Sbjct: 682 CEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 182/379 (48%), Gaps = 30/379 (7%)
Query: 72 HSVTLFNRTPTP-NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGC 127
+++ +F+ P+P ++ + S S + + FY R+ + F+F +L
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 128 NLQAA--RAIHCHVIKFAVASA--PYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVT 183
+ +A + H + F +A+ P+V TG + YA G + A VFDEMS R +V+
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC---------LLL 234
M+ Y + G + EA LFE M+ DS NVM DE + + C +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMK-DS------NVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
+ ++ VR D L A+++ G ++ R + + V TA+V Y K
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN----LFVSTAMVSGYSK 290
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG LDDA+ IFD +D+V W +MI Y Y +EALR+F+EMC G+KP V+ +V
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
++AC + G++ K + + + G+E ++ ++N+ + G L+ D+ M
Sbjct: 351 ISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR- 408
Query: 415 DSVLWGTLLWACRLHKNVS 433
+ V W +++ A +H S
Sbjct: 409 NVVSWSSMINALSMHGEAS 427
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFY 105
GL+ +N L Y+ G L + +F + P NV W+S+I+A H + ALS +
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN 128
ARM + VEPN TF VL+GC+
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCS 456
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/570 (40%), Positives = 323/570 (56%), Gaps = 38/570 (6%)
Query: 64 YSSVGHLHHSVTLFNRTPTP----NVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPN 116
YS +G +V LF + +V W++ I ++ +AL +ML+ ++PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 117 AFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
T SVL GC L + IHC+ IK+ + + G
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPID------------LRKNGH--------- 403
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
+ ++V + ++ YAK ++ AR +F+ + RDVV W VMI Y+Q+G N+ L
Sbjct: 404 --GDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 233 LLFRKMLAE--KVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKNGVEVRVGTALV 289
L +M E + RP+ T+ L +C L AL G+ IH+Y + N +N V + V L+
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY KCGS+ DAR +FDN++ ++ V W S++ GY +HGY EEAL +FDEM +G K V
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
T + VL AC HSG++ +G E FN MK +G+ P EH+ C+V+LLGRAGRL L+
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Query: 410 MKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGA 469
M +P V+W L CR+H V LGE AE I G+Y LLSN+YA +G W
Sbjct: 641 MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDV 700
Query: 470 AKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYT 529
++RSLM+ GV+K PGCS +E F GD HP +++IY +L + R+K GY
Sbjct: 701 TRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Query: 530 PKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMM 589
P+T LHD+ +E+K+ L HSEKLALA+G+++T G I+I KNLRVC DCH+ M
Sbjct: 761 PETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYM 820
Query: 590 SKITGRKIITRDRNRFHHFENGSCSCGDYW 619
S+I II RD +RFHHF+NGSCSC YW
Sbjct: 821 SRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 192/396 (48%), Gaps = 27/396 (6%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQ-PVEPNAFT 119
YS L + +F+ +V W SII +++ + AL ++RM + P+ T
Sbjct: 172 YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT 231
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+VL C + +HC + + +V LV YA+ G + A VF MS
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLL 233
+ +VS AM+ Y++ GR +A LFE M+ + DVV W+ I YAQ G+ E L
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH-----KN--GVEVRVGT 286
+ R+ML+ ++P+E+TL++VLS C +GAL G+ IH Y + KN G E V
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 287 ALVDMYCKCGSLDDARKIFDNIV--DRDVVAWNSMIMGYAIHGYSEEALRLFDEMC--GM 342
L+DMY KC +D AR +FD++ +RDVV W MI GY+ HG + +AL L EM
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC 471
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
+P+ T L AC + G +I ++N P C++++ + G +
Sbjct: 472 QTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSIS 530
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE 437
+ + M + V W +L+ +H GEE
Sbjct: 531 DARLVFDNMMAK-NEVTWTSLMTGYGMH---GYGEE 562
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 236/572 (41%), Gaps = 101/572 (17%)
Query: 56 LNFKLQRSYSSVGHLHHSVTLFNRTPTPN--VFLWTSIIHAHSH---SDQALSFYARMLA 110
L L +Y SVG L H+V+L R P + V+ W S+I ++ +++ L + M +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 111 QPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFS 166
P+ +TF V C +++ + H + S +V LV Y+R +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
A KVFD E DVV WN +I+ YA+ G
Sbjct: 181 ARKVFD---------------------------------EMSVWDVVSWNSIIESYAKLG 207
Query: 227 MPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
P L +F +M E RPD ITL+ VL C LG G+ +H + + + VG
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD-------- 337
LVDMY KCG +D+A +F N+ +DVV+WN+M+ GY+ G E+A+RLF+
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 338 ---------------------------EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
+M G+KP++VT ++VL+ C G + G EI
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 371 --------FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK-TDPDSVLWGT 421
+L KNG+G E + ++++ + +++ + + + D V W
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMV--INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGV 481
++ H + + E+ + + + +S A + + A ++ + +
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS-LAALRIGKQIHAYAL 504
Query: 482 EKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGE 541
+ + V+N + + A + D L+ + M + + + T +H GE
Sbjct: 505 RNQQNAVPLFVSNCLIDMYA---KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 542 EQKELSLEVHSEKLALAFGLISTRPGTTIKIV 573
E +L + E + F L G T+ +V
Sbjct: 562 E----ALGIFDEMRRIGFKL----DGVTLLVV 585
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 340/570 (59%), Gaps = 13/570 (2%)
Query: 63 SYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEP 115
+Y+ G L V + + + N+ W I+ + S +A+ + ++ P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 116 NAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ T SSVL L R IH +VIK + V + ++ Y + G V+ +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRD--VVCWNVMIDEYAQNGMPN 229
++ A +T +++G + +A +FE + + + VV W +I AQNG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
E L LFR+M V+P+ +T+ ++L +CG + AL GR H + V VG+AL+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY KCG ++ ++ +F+ + +++V WNS++ G+++HG ++E + +F+ + +KP +
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
+F ++L+ACG GL +GW+ F +M YG++P++EH+ CMVNLLGRAG+L+E YDL++
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 410 MKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGA 469
M +PDS +WG LL +CRL NV L E AE + + GTYVLLSNIYAA G W
Sbjct: 551 MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 470 AKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYT 529
+R+ M+ G++K PGCS I+V NR++ +AGD HP+ I ++E++ ++ +G+
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 530 PKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMM 589
P D LHD+ E+++E L HSEKLA+ FGL++T GT ++++KNLR+C DCH+V+K +
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730
Query: 590 SKITGRKIITRDRNRFHHFENGSCSCGDYW 619
S GR+I RD NRFHHF++G CSCGD+W
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 208/457 (45%), Gaps = 60/457 (13%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEP 115
KL SYS+ + + + P P ++ ++S+I+A + + Q++ ++RM + + P
Sbjct: 55 KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 116 NAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
++ ++ C + + IHC + +V + Y R G + A KVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPN 229
D MS++ +V+ +A+L YA+ G L E + ME+ ++V WN ++ + ++G
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
E +++F+K+ PD++T+ +VL S G L GR IH YV + V +A++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 290 DMYCKCGS-------------------------------LDDARKIF----DNIVDRDVV 314
DMY K G +D A ++F + ++ +VV
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 315 AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM 374
+W S+I G A +G EAL LF EM GVKP+ VT ++L ACG+ + G
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG------- 407
Query: 375 KNGYGMEPKIE-----HFG-CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
++ +G ++ H G ++++ + GR+ +V M + V W +L+ +
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 429 HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGN 465
H I E ++ L ++ +++ +A G
Sbjct: 467 HGKAKEVMSIFESLMRTRLKPD--FISFTSLLSACGQ 501
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/585 (40%), Positives = 333/585 (56%), Gaps = 58/585 (9%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS----DQALSFYARMLAQ-PV 113
K+ + SS ++++ +F+ + F+W ++I A +H ++A Y +ML +
Sbjct: 88 KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES 147
Query: 114 EPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEK 169
P+ TF VL C + +HC ++K YV+ GL+ Y G + A K
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207
Query: 170 VFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
VFDEM ERSLVS WN MID + G +
Sbjct: 208 VFDEMPERSLVS---------------------------------WNSMIDALVRFGEYD 234
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN---GVEVRVGT 286
L LFR+M PD T+ +VLS+C LG+L G W H+++ + ++V V
Sbjct: 235 SALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM--GV 344
+L++MYCKCGSL A ++F + RD+ +WN+MI+G+A HG +EEA+ FD M V
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV 353
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
+P+ VTFV +L AC H G V+KG + F++M Y +EP +EH+GC+V+L+ RAG + E
Sbjct: 354 RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI 413
Query: 405 DLVRGMKTDPDSVLWGTLLWAC-RLHKNVSLGEEIAEFIL-------SHNLASSGTYVLL 456
D+V M PD+V+W +LL AC + +V L EEIA I+ S N SG YVLL
Sbjct: 414 DMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLL 473
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
S +YA++ W VR LM G+ KEPGCS IE+N HEF AGD HP+++ IY L
Sbjct: 474 SRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Query: 517 EEMNCRLKANGYTP-KTDLVLHDIGEE-QKELSLEVHSEKLALAFGLISTRPGTTIKIVK 574
+ ++ RL++ GY P ++ L D + KE SL +HSE+LA+AFGLI+ P T I+I K
Sbjct: 534 KVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFK 593
Query: 575 NLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
NLRVC DCH V K++SK+ +II RDR RFHHF++GSCSC DYW
Sbjct: 594 NLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/552 (41%), Positives = 334/552 (60%), Gaps = 18/552 (3%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----N 128
LF+ P P+ F + ++ + + ++A SF+ RM P + +A ++++++ G
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM---PFK-DAASWNTMITGYARRGE 170
Query: 129 LQAARAIHCHVIKFAVASAPYVS-TGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
++ AR + +++ VS ++ Y GD+ A F R +V+ TAM+T
Sbjct: 171 MEKARELF-----YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMIT 225
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
Y K ++ A +F+ M + +++V WN MI Y +N P + L LFR ML E +RP+
Sbjct: 226 GYMKAKKVELAEAMFKDMTVN-KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
L + L C +L AL+ GR IH V +V T+L+ MYCKCG L DA K+F+
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
+ +DVVAWN+MI GYA HG +++AL LF EM ++P +TFVAVL AC H+GLV+ G
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 368 WEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACR 427
F M Y +EP+ +H+ CMV+LLGRAG+LEE L+R M P + ++GTLL ACR
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 464
Query: 428 LHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGC 487
+HKNV L E AE +L N ++ YV L+NIYA+ W A+VR MK S V K PG
Sbjct: 465 VHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGY 524
Query: 488 SIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELS 547
S IE+ N++H F + D HP+ I+ L+E+ ++K GY P+ + LH++ EEQKE
Sbjct: 525 SWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKL 584
Query: 548 LEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHH 607
L HSEKLA+AFG I G+ I++ KNLR+C DCH +K +S+I R+II RD RFHH
Sbjct: 585 LLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHH 644
Query: 608 FENGSCSCGDYW 619
F++GSCSCGDYW
Sbjct: 645 FKDGSCSCGDYW 656
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 17/336 (5%)
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
L+G + A ++FDE+ E S ML+CY ++ +A+ F+ M +D
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPF--KDAA 156
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
WN MI YA+ G + LF M+ + +E++ A++S + G LE H +
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKAS--HFFK 210
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIF-DNIVDRDVVAWNSMIMGYAIHGYSEEA 332
GV TA++ Y K ++ A +F D V++++V WN+MI GY + E+
Sbjct: 211 VAPVRGVV--AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG 268
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
L+LF M G++P+ + L C + G +I ++ + + +++
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLIS 327
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS--- 449
+ + G L + + L MK D V W ++ H N + ++ + +
Sbjct: 328 MYCKCGELGDAWKLFEVMKKK-DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
Query: 450 SGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEP 485
+ VLL+ +A N +G A S+++ VE +P
Sbjct: 387 TFVAVLLACNHAGLVN-IGMAYFESMVRDYKVEPQP 421
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 329/553 (59%), Gaps = 35/553 (6%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTF 120
Y+ G L + +F + P + WT++I +S D+ AL F+ +ML PN FT
Sbjct: 105 YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV 180
SSV IK A A G G G F + FD S V
Sbjct: 165 SSV----------------IKAAAAE----RRGCCGHQLHG---FCVKCGFD-----SNV 196
Query: 181 SV-TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
V +A+L Y ++G + +A+L+F+ +E SR+ V WN +I +A+ + L LF+ ML
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALE--SRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ RP + ++ +C G LE G+W+H+Y+ + G L+DMY K GS+
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
DARKIFD + RDVV+WNS++ YA HG+ +EA+ F+EM +G++P++++F++VLTAC
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLW 419
HSGL+ +GW + LMK G+ P+ H+ +V+LLGRAG L + M +P + +W
Sbjct: 375 HSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433
Query: 420 GTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGS 479
LL ACR+HKN LG AE + + G +V+L NIYA+ G W AA+VR MK S
Sbjct: 434 KALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKES 493
Query: 480 GVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDI 539
GV+KEP CS +E+ N IH F+A D RHP+ ++I EE+ ++K GY P T V+ +
Sbjct: 494 GVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHV 553
Query: 540 GEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIIT 599
++++E++L+ HSEK+ALAF L++T PG+TI I KN+RVC DCH+ +K+ SK+ GR+II
Sbjct: 554 DQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIV 613
Query: 600 RDRNRFHHFENGS 612
RD NRFHHF++ S
Sbjct: 614 RDTNRFHHFKDAS 626
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 133/263 (50%), Gaps = 10/263 (3%)
Query: 170 VFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
+ + +V +L YAK G L EAR +FE M RD V W +I Y+Q+ P
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP--QRDFVTWTTLISGYSQHDRPC 143
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
+ LL F +ML P+E TL +V+ + G +H + V VG+AL+
Sbjct: 144 DALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL 203
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
D+Y + G +DDA+ +FD + R+ V+WN++I G+A +E+AL LF M G +PS
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 350 TFVAVLTACGHSGLVSKG-WEIFNLMKNGYGMEPKIEHFG--CMVNLLGRAGRLEEGYDL 406
++ ++ AC +G + +G W ++K+G K+ F ++++ ++G + + +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSG----EKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 407 VRGMKTDPDSVLWGTLLWACRLH 429
+ D V W +LL A H
Sbjct: 320 FDRL-AKRDVVSWNSLLTAYAQH 341
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD 312
+L C L GR +H+++ ++ +G L++MY KCGSL++ARK+F+ + RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 313 VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA--------CGHS--G 362
V W ++I GY+ H +AL F++M G P++ T +V+ A CGH G
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
K G + + +++L R G +++ + +++ D V W L
Sbjct: 186 FCVKC-----------GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNAL 233
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLASSG-TYVLL-----SNIYAASGNWVGAAKVRS 474
+ E+ + +L S +Y L S + G WV A ++S
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 337/565 (59%), Gaps = 13/565 (2%)
Query: 66 SVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALSFYARMLAQPV-EPNAFTFS 121
VG + ++ F + ++ W S+I + + +AL +++ML + P+ FT +
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLA 283
Query: 122 SVLHGC-NLQA---ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
SVL C NL+ + IH H++ + V L+ Y+R G V +A ++ ++ +
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 178 SLV--SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
L TA+L Y K G + +A+ +F ++ RDVV W MI Y Q+G E + LF
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLK--DRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
R M+ RP+ TL A+LS L +L G+ IH V V AL+ MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 296 GSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
G++ A + FD I +RD V+W SMI+ A HG++EEAL LF+ M G++P +T+V V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
+AC H+GLV++G + F++MK+ + P + H+ CMV+L GRAG L+E + + M +P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
D V WG+LL ACR+HKN+ LG+ AE +L +SG Y L+N+Y+A G W AAK+R
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDL 534
MK V+KE G S IEV +++H F D HP+ +IY+ ++++ +K GY P T
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701
Query: 535 VLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
VLHD+ EE KE L HSEKLA+AFGLIST TT++I+KNLRVC DCH+ +K +SK+ G
Sbjct: 702 VLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVG 761
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
R+II RD RFHHF++G CSC DYW
Sbjct: 762 REIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 201/430 (46%), Gaps = 52/430 (12%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFT 119
+YS G + + F++ P + WT++I + + Q A+ M+ + +EP FT
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
++VL ++ + +H ++K + VS L+ YA+ GD A+ VFD M
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
R + S AM+ + + G++ A FE M RD+V WN MI + Q G L +F
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMA--ERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 236 RKMLAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
KML + + PD TL +VLS+C L L G+ IHS++ + V AL+ MY +
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 295 CGSLDDARK---------------------------------IFDNIVDRDVVAWNSMIM 321
CG ++ AR+ IF ++ DRDVVAW +MI+
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 322 GYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGM 380
GY HG EA+ LF M G G +P+ T A+L+ +S G +I + +K+G
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 381 EPKIEHFGCMVNLLGRAGRL---EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE 437
+ + ++ + +AG + +DL+R + D+V W +++ A H + E
Sbjct: 447 SVSVSN--ALITMYAKAGNITSASRAFDLIR---CERDTVSWTSMIIALAQHGHAEEALE 501
Query: 438 IAEFILSHNL 447
+ E +L L
Sbjct: 502 LFETMLMEGL 511
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 162/375 (43%), Gaps = 69/375 (18%)
Query: 131 AARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYA 190
A+ +HC VIK + + Y+ L+ Y++ G A K+FDEM R+ S +L+ Y+
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 191 KHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
K G + F+ + RD V W MI Y G ++ + + M+ E + P + TL
Sbjct: 92 KRGDMDSTCEFFDQLP--QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV- 309
VL+S +E+G+ +HS++ V V +L++MY KCG A+ +FD +V
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 310 ------------------------------DRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
+RD+V WNSMI G+ GY AL +F +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 340 CGMG-VKPSDVTFVAVLTACG-----------HSGLVSKGWEIFNLMKNGY--------G 379
+ P T +VL+AC HS +V+ G++I ++ N G
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 380 MEP-------------KIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
+E KIE F +++ + G + + ++ +K D D V W ++
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRDVVAWTAMIVGY 388
Query: 427 RLHKNVSLGEEIAEF 441
H S GE I F
Sbjct: 389 EQHG--SYGEAINLF 401
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/584 (38%), Positives = 338/584 (57%), Gaps = 46/584 (7%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFY 105
G D P L KL YS +G + ++ +F++T +++W ++ A + H ++ L Y
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 106 ARMLAQPVEPNAFTFSSVLHGC--------NLQAARAIHCHVIKFAVASAPYVSTGLVGA 157
+M VE + FT++ VL C +L + IH H+ + +S Y+ T LV
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
YAR G V A V F GM R+VV W+
Sbjct: 227 YARFGCVDYASYV-------------------------------FGGMPV--RNVVSWSA 253
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEK--VRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
MI YA+NG E L FR+M+ E P+ +T+++VL +C L ALE G+ IH Y+
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+ V +ALV MY +CG L+ +++FD + DRDVV+WNS+I Y +HGY ++A+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
F+EM G P+ VTFV+VL AC H GLV +G +F M +G++P+IEH+ CMV+LLG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
RA RL+E +V+ M+T+P +WG+LL +CR+H NV L E + + + ++G YVL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLM 515
L++IYA + W +V+ L++ G++K PG +EV +++ F++ D +P + I+
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 516 LEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKN 575
L ++ +K GY P+T VL+++ E+KE + HSEKLALAFGLI+T G I+I KN
Sbjct: 554 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 613
Query: 576 LRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
LR+C DCH K +SK ++I+ RD NRFH F+NG CSCGDYW
Sbjct: 614 LRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 43/273 (15%)
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
N +I + G + + ++L+++ P + T ++ CG +L +H ++ +
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+ + + + T L+ MY GS+D ARK+FD R + WN++ + G+ EE L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHS----GLVSKGWEIF-NLMKNGYGMEPKI------ 384
+ +M +GV+ T+ VL AC S + KG EI +L + GY I
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 385 --EHFGC---------------------MVNLLGRAGRLEEGYDLVRGM-----KTDPDS 416
FGC M+ + G+ E R M + P+S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS 449
V ++L AC + G+ I +IL L S
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/496 (42%), Positives = 308/496 (62%), Gaps = 40/496 (8%)
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
+++ IH VI+ S YV L+ YA GDV SA KVFD+M E+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK---------- 52
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
D+V WN +I+ +A+NG P E L L+ +M ++ ++PD
Sbjct: 53 -----------------------DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 248 ITLLAVLSSCGQLGALESGRWIHSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
T++++LS+C ++GAL G+ +H Y VG +N + L+D+Y +CG +++A+ +
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN---LHSSNVLLDLYARCGRVEEAKTL 146
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM-CGMGVKPSDVTFVAVLTACGHSGL 363
FD +VD++ V+W S+I+G A++G+ +EA+ LF M G+ P ++TFV +L AC H G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 364 VSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
V +G+E F M+ Y +EP+IEHFGCMV+LL RAG++++ Y+ ++ M P+ V+W TLL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 424 WACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEK 483
AC +H + L E IL SG YVLLSN+YA+ W K+R M GV+K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 484 EPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQ 543
PG S++EV NR+HEF+ GD HP+S IY L+EM RL++ GY P+ V D+ EE+
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 544 KELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRN 603
KE ++ HSEK+A+AF LIST + I +VKNLRVC DCH +K++SK+ R+I+ RDR+
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 604 RFHHFENGSCSCGDYW 619
RFHHF+NGSCSC DYW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y++ G + + +F++ P ++ W S+I+ + + ++AL+ Y M ++ ++P+ FT
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+L C L + +H ++IK + + S L+ YAR G V A+ +FDEM +
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
++ VS T+++ A +G +EA LF+ ME+
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMES----------------------------- 183
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
E + P EIT + +L +C G ++ G + +K + +VD+ +
Sbjct: 184 ---TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 296 GSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEA 332
G + A + ++ + +VV W +++ +HG S+ A
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/590 (38%), Positives = 331/590 (56%), Gaps = 53/590 (8%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYA 106
LD + + L Y + + +F+ + LW ++I +S H +AL +
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 107 RMLAQP-VEPNAFTFSSVLHGCNLQAA----RAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + N+ T + V+ C A AIH V+K + +V L+ Y+R
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G + A ++F +M + RD+V WN MI
Sbjct: 454 GKIDIAMRIFGKM---------------------------------EDRDLVTWNTMITG 480
Query: 222 YAQNGMPNECLLLFRKM--LAEKV---------RPDEITLLAVLSSCGQLGALESGRWIH 270
Y + + LLL KM L KV +P+ ITL+ +L SC L AL G+ IH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
+Y + +V VG+ALVDMY KCG L +RK+FD I ++V+ WN +IM Y +HG +
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA+ L M GVKP++VTF++V AC HSG+V +G IF +MK YG+EP +H+ C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSV-LWGTLLWACRLHKNVSLGEEIAEFILSHNLAS 449
V+LLGRAGR++E Y L+ M D + W +LL A R+H N+ +GE A+ ++
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 450 SGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKS 509
+ YVLL+NIY+++G W A +VR MK GV KEPGCS IE + +H+F+AGD HP+S
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 510 QDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTT 569
+ + LE + R++ GY P T VLH++ E++KE+ L HSEKLA+AFG+++T PGT
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 840
Query: 570 IKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
I++ KNLRVC DCH K +SKI R+II RD RFH F+NG+CSCGDYW
Sbjct: 841 IRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 179/390 (45%), Gaps = 55/390 (14%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFY 105
G+D + N L Y G +F+R N W S+I + + AL +
Sbjct: 129 GVDSVTVAN-TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN-------LQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
ML + VEP++FT SV+ C+ L + +H + GL
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY--------------GL---- 229
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
R G++ S + ++ Y K G+L +++L RD+V WN +
Sbjct: 230 -RKGELNS-------------FIINTLVAMYGKLGKLASSKVLLGSF--GGRDLVTWNTV 273
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+ QN E L R+M+ E V PDE T+ +VL +C L L +G+ +H+Y KN
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA--LKN 331
Query: 279 GV---EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
G VG+ALVDMYC C + R++FD + DR + WN+MI GY+ + + +EAL L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 336 FDEM-CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNL 393
F M G+ + T V+ AC SG S+ I ++K G + +++ ++++
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDM 449
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
R G+++ + M+ D D V W T++
Sbjct: 450 YSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 54/316 (17%)
Query: 82 TPNVFL--------WTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGC--- 127
P++F+ W ++ + S+ +A+ Y M+ ++P+ + F ++L
Sbjct: 51 APSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL 110
Query: 128 -NLQAARAIHCHVIKFAVA-SAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAM 185
+++ + IH HV KF + V+ LV Y + GD + KVFD +SER+ VS
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS---- 166
Query: 186 LTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRP 245
WN +I L FR ML E V P
Sbjct: 167 -----------------------------WNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 246 DEITLLAVLSSCGQLGALES---GRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
TL++V+++C L E G+ +H+Y G K + + LV MY K G L ++
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
+ + RD+V WN+++ + EAL EM GV+P + T +VL AC H
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 363 LVSKGWEIFNL-MKNG 377
++ G E+ +KNG
Sbjct: 317 MLRTGKELHAYALKNG 332
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 207 ADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG 266
+ SR W ++ ++ + E +L + M+ ++PD A+L + L +E G
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 267 RWIHSYVGNHKNGVE-VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAI 325
+ IH++V GV+ V V LV++Y KCG K+FD I +R+ V+WNS+I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP-KI 384
E AL F M V+PS T V+V+TAC S L + + YG+ ++
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC--SNLPMPEGLMMGKQVHAYGLRKGEL 234
Query: 385 EHF--GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIAEF 441
F +V + G+ G+L L+ G D V W T+L + C+ + + E + E
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLL-GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 442 IL 443
+L
Sbjct: 294 VL 295
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALS 103
+RGLD + L YS +G + ++ +F + ++ W ++I + H + AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 104 FYARM--LAQPV---------EPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAP 148
+M L + V +PN+ T ++L C L + IH + IK +A+
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 149 YVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD 208
V + LV YA+ G + + KVFD++ ++++++ ++ Y HG +EA
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA---------- 602
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
ID L R M+ + V+P+E+T ++V ++C G ++ G
Sbjct: 603 ----------ID-------------LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 269 IHSYVGNHKNGVEVRVG--TALVDMYCKCGSLDDARKIFDNIVDRDVV---AWNSMIMGY 323
I YV GVE +VD+ + G + +A ++ N++ RD AW+S++
Sbjct: 640 IF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM-NMMPRDFNKAGAWSSLLGAS 697
Query: 324 AIHGYSE 330
IH E
Sbjct: 698 RIHNNLE 704
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/564 (38%), Positives = 325/564 (57%), Gaps = 42/564 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
YS G L+ + LF+ P +V WT++ ++ S +A+ + +M+ V+P+++
Sbjct: 156 YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD-----EMS 175
VL C HV GD+ S E + EM
Sbjct: 216 VQVLSAC---------VHV----------------------GDLDSGEWIVKYMEEMEMQ 244
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+ S V T ++ YAK G++ +AR +F+ M +D+V W+ MI YA N P E + LF
Sbjct: 245 KNSFVR-TTLVNLYAKCGKMEKARSVFDSMV--EKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+ML E ++PD+ +++ LSSC LGAL+ G W S + H+ + + AL+DMY KC
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G++ ++F + ++D+V N+ I G A +G+ + + +F + +G+ P TF+ +L
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
C H+GL+ G FN + Y ++ +EH+GCMV+L GRAG L++ Y L+ M P+
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+++WG LL CRL K+ L E + + +++ ++G YV LSNIY+ G W AA+VR +
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLV 535
M G++K PG S IE+ ++HEF+A D HP S IY LE++ ++ G+ P T+ V
Sbjct: 542 MNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV 601
Query: 536 LHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGR 595
D+ EE+KE L HSEKLA+A GLIST G I++VKNLRVC DCH VMK++SKIT R
Sbjct: 602 FFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRR 661
Query: 596 KIITRDRNRFHHFENGSCSCGDYW 619
+I+ RD NRFH F NGSCSC DYW
Sbjct: 662 EIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 169/344 (49%), Gaps = 35/344 (10%)
Query: 72 HSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGCN 128
+S LF+ T PN+FL+ S+I+ ++ + L + + + + FTF VL C
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
++R + + V + ++T++L+
Sbjct: 123 RASSRKLGIDLHSLVVKCG---------------------------FNHDVAAMTSLLSI 155
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
Y+ GRL +A LF+ E R VV W + Y +G E + LF+KM+ V+PD
Sbjct: 156 YSGSGRLNDAHKLFD--EIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSY 213
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
++ VLS+C +G L+SG WI Y+ + V T LV++Y KCG ++ AR +FD++
Sbjct: 214 FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM 273
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG- 367
V++D+V W++MI GYA + + +E + LF +M +KP + V L++C G + G
Sbjct: 274 VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE 333
Query: 368 WEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
W I + ++ + + + ++++ + G + G+++ + MK
Sbjct: 334 WGISLIDRHEFLTNLFMAN--ALIDMYAKCGAMARGFEVFKEMK 375
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/583 (38%), Positives = 332/583 (56%), Gaps = 44/583 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
R G L +L + +G + ++ +F+ P +FLW ++ + + ++L
Sbjct: 36 RTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLL 95
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
Y +M V P+ FT+ V+ + A+H HV+K+ V+T LV
Sbjct: 96 LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELV---- 151
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
Y K G L A LFE M+ +D+V WN +
Sbjct: 152 ---------------------------MMYMKFGELSSAEFLFESMQV--KDLVAWNAFL 182
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Q G L F KM A+ V+ D T++++LS+CGQLG+LE G I+ +
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
+ V A +DM+ KCG+ + AR +F+ + R+VV+W++MI+GYA++G S EAL LF M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM--KNGYGMEPKIEHFGCMVNLLGRA 397
G++P+ VTF+ VL+AC H+GLV++G F+LM N +EP+ EH+ CMV+LLGR+
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTY-VLL 456
G LEE Y+ ++ M +PD+ +WG LL AC +H+++ LG+++A+ +L G+Y VLL
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVAD-VLVETAPDIGSYHVLL 421
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
SNIYAA+G W KVRS M+ G +K S +E +IH F GD HP+S+ IY L
Sbjct: 422 SNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKL 481
Query: 517 EEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNL 576
+E+ +++ GY P T V HD+ E+KE SL HSEKLA+AFGLI RPG I+++KNL
Sbjct: 482 DEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNL 541
Query: 577 RVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
R C DCH+ K +S +T +II RD+NRFHHF NG CSC ++W
Sbjct: 542 RTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/598 (37%), Positives = 337/598 (56%), Gaps = 46/598 (7%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPN 116
L + Y G + + +LF + P N WT ++ D A Y + P + N
Sbjct: 116 LVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDN 172
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
+S++HG + AR I + + +V + T +V Y + V A K+FD
Sbjct: 173 -IARTSMIHGLCKEGRVDEAREIFDEMSERSVITW----TTMVTGYGQNNRVDDARKIFD 227
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD------------------------ 208
M E++ VS T+ML Y ++GR+ +A LFE M
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRV 287
Query: 209 -----SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL 263
R+ W +I + +NG E L LF M + VRP TL+++LS C L +L
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 264 ESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGY 323
G+ +H+ + + V+V V + L+ MY KCG L ++ IFD +D++ WNS+I GY
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 324 AIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
A HG EEAL++F EM G KP++VTFVA L+AC ++G+V +G +I+ M++ +G++P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
H+ CMV++LGRAGR E +++ M +PD+ +WG+LL ACR H + + E A+ +
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 443 LSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAG 502
+ +SGTY+LLSN+YA+ G W A++R LMK V K PGCS EV N++H F G
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRG 587
Query: 503 DLR-HPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGL 561
+ HP+ + I +L+E++ L+ GY P LHD+ EE+K SL+ HSE+LA+A+ L
Sbjct: 588 GINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYAL 647
Query: 562 ISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+ G I+++KNLRVC DCH+ +K++SK+ R+II RD NRFHHF NG CSC DYW
Sbjct: 648 LKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 47/324 (14%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQ 111
P P N ++ S +G +H + LF+ + ++ W S++ ++A ++ +
Sbjct: 16 PPPTANVRITH-LSRIGKIHEARKLFDSCDSKSISSWNSMVAG---------YFANLMPR 65
Query: 112 PVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
AR + + + S GLV Y + G++ A KVF
Sbjct: 66 D-------------------ARKLFDEMPDRNIISW----NGLVSGYMKNGEIDEARKVF 102
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
D M ER++VS TA++ Y +G++ A LF M ++ V W VM+ + Q+G ++
Sbjct: 103 DLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNK--VSWTVMLIGFLQDGRIDDA 160
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
L+ +M+ +K D I +++ + G ++ R I + V T +V
Sbjct: 161 CKLY-EMIPDK---DNIARTSMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTG 212
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
Y + +DDARKIFD + ++ V+W SM+MGY +G E+A LF+ M VKP +
Sbjct: 213 YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE---VMPVKPV-IAC 268
Query: 352 VAVLTACGHSGLVSKGWEIFNLMK 375
A+++ G G ++K +F+ MK
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMK 292
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 151/296 (51%), Gaps = 24/296 (8%)
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
A K+FDEM +R+++S +++ Y K+G + EAR +F+ M R+VV W ++ Y NG
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP--ERNVVSWTALVKGYVHNG 124
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT 286
+ LF KM EK ++++ +L Q G ++ ++ + + N T
Sbjct: 125 KVDVAESLFWKM-PEK---NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIAR----T 176
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
+++ CK G +D+AR+IFD + +R V+ W +M+ GY + ++A ++FD M +
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEK 232
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
++V++ ++L +G + E+F +M ++P I M++ LG+ G + + +
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIAKARRV 287
Query: 407 VRGMKTDPDSVLWGTLLWACRLH-KNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
MK D+ W T++ ++H +N E + FIL T+ L +I +
Sbjct: 288 FDSMKERNDAS-WQTVI---KIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 35/154 (22%)
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
DARK+FD + DR++++WN ++ GY +G +EA ++FD M V V++ A++
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYV 121
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG--RAGRLEEGYDLVRGMKTDPDSV 417
H+G V +F M P+ V L+G + GR+++
Sbjct: 122 HNGKVDVAESLFWKM-------PEKNKVSWTVMLIGFLQDGRIDD--------------- 159
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG 451
AC+L++ + + IA + H L G
Sbjct: 160 -------ACKLYEMIPDKDNIARTSMIHGLCKEG 186
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/581 (38%), Positives = 333/581 (57%), Gaps = 40/581 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
+ GL+ ++ KL Y+ G L +F+R ++ W SII A+ ++Q A+S
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 104 FYARMLAQPVEPNAFTF---SSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M ++P+ T +S+L +++A R++ F + ++ +G
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ----GFTLRKGWFLEDITIG--- 387
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
A++ YAK G + AR +F + + DV+ WN +I
Sbjct: 388 -----------------------NAVVVMYAKLGLVDSARAVFNWLP--NTDVISWNTII 422
Query: 220 DEYAQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
YAQNG +E + ++ M E ++ ++ T ++VL +C Q GAL G +H + +
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
++V V T+L DMY KCG L+DA +F I + V WN++I + HG+ E+A+ LF E
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M GVKP +TFV +L+AC HSGLV +G F +M+ YG+ P ++H+GCMV++ GRAG
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSN 458
+LE ++ M PD+ +WG LL ACR+H NV LG+ +E + G +VLLSN
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 662
Query: 459 IYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEE 518
+YA++G W G ++RS+ G G+ K PG S +EV+N++ F G+ HP +++Y L
Sbjct: 663 MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 722
Query: 519 MNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRV 578
+ +LK GY P VL D+ +++KE L HSE+LA+AF LI+T TTI+I KNLRV
Sbjct: 723 LQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRV 782
Query: 579 CLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
C DCHSV K +SKIT R+II RD NRFHHF+NG CSCGDYW
Sbjct: 783 CGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 204/440 (46%), Gaps = 76/440 (17%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSII----HAHSHSDQALSFYARMLAQPVE 114
KL Y +G++ + F+ +V+ W +I A + S+ F ML+ +
Sbjct: 91 KLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT 150
Query: 115 PNAFTFSSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
P+ TF SVL C + IHC +KF YV+ L+ Y+R V +A +FDE
Sbjct: 151 PDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEA-DSRDVVCW----------------- 215
M R + S AM++ Y + G +EA L G+ A DS VV
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 216 ---------------NVMIDEYAQNGMPNEC----------------------------- 231
N +ID YA+ G +C
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 232 --LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE-VRVGTAL 288
+ LF++M +++PD +TL+++ S QLG + + R + + +E + +G A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPS 347
V MY K G +D AR +F+ + + DV++WN++I GYA +G++ EA+ +++ M G + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 348 DVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
T+V+VL AC +G + +G ++ L+KNG ++ + + ++ G+ GRLE+ L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV--VTSLADMYGKCGRLEDALSL 508
Query: 407 VRGMKTDPDSVLWGTLLWAC 426
+ +SV W TL+ AC
Sbjct: 509 FYQIPR-VNSVPWNTLI-AC 526
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 51/318 (16%)
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
NLQ+A+ +H ++ +S LV Y G+V A FD +
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHI------------- 112
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE---CLLLFRKMLAEKVR 244
+RDV WN+MI Y + G +E C LF ML+ +
Sbjct: 113 --------------------QNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLT 150
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
PD T +VL +C + G IH +V V +L+ +Y + ++ +AR +
Sbjct: 151 PDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD + RD+ +WN+MI GY G ++EAL L + + M VT V++L+AC +G
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDF 263
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
++G I + +G+E ++ +++L GRL + + M D + W +++
Sbjct: 264 NRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIK 321
Query: 425 ACRLHKN----VSLGEEI 438
A L++ +SL +E+
Sbjct: 322 AYELNEQPLRAISLFQEM 339
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/527 (40%), Positives = 318/527 (60%), Gaps = 11/527 (2%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+AL + M+ V P+ + S + C N+ ++ H +V++ S + L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
Y + +A ++FD MS +++V+ +++ Y ++G + A FE M +++V W
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP--EKNIVSW 437
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLA-EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
N +I Q + E + +F M + E V D +T++++ S+CG LGAL+ +WI+ Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI- 496
Query: 275 NHKNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
KNG++ VR+GT LVDM+ +CG + A IF+++ +RDV AW + I A+ G +E A
Sbjct: 497 -EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
+ LFD+M G+KP V FV LTAC H GLV +G EIF M +G+ P+ H+GCMV+
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
LLGRAG LEE L+ M +P+ V+W +LL ACR+ NV + AE I +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YVLLSN+YA++G W AKVR MK G+ K PG S I++ + HEF +GD HP+ +I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
ML+E++ R G+ P VL D+ E++K L HSEKLA+A+GLIS+ GTTI+I
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
VKNLRVC DCHS K SK+ R+II RD NRFH+ G CSCGD+W
Sbjct: 796 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 45/285 (15%)
Query: 86 FLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARA----IHCH 138
F++ S+I ++ S ++A+ + RM+ + P+ +TF L C A+ IH
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 139 VIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREA 198
++K A +V LV YA G+ L A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGE-------------------------------LDSA 188
Query: 199 RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL-LLFRKMLAEKVRPDEITLLAVLSSC 257
R +F+ E R+VV W MI YA+ + + L FR + E+V P+ +T++ V+S+C
Sbjct: 189 RKVFD--EMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 258 GQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
+L LE+G +++++ N +G+EV + +ALVDMY KC ++D A+++FD ++
Sbjct: 247 AKLEDLETGEKVYAFIRN--SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH 360
N+M Y G + EAL +F+ M GV+P ++ ++ +++C
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N +I YA +G+ NE +LLF +M+ + PD+ T LS+C + A +G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
++ V +LV Y +CG LD ARK+FD + +R+VV+W SMI GYA ++++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 335 LFDEMC-GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKN 376
LF M V P+ VT V V++AC + G +++ ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/622 (35%), Positives = 337/622 (54%), Gaps = 80/622 (12%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
+F+ +V W SII+ + +++ LS + +ML +E + T SV GC
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE-------------------- 168
+ RA+H +K + L+ Y++ GD+ SA+
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 169 -----------KVFDEMSERSL----VSVTAMLTC------------------------- 188
K+F+EM E + +VTA+L C
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 189 ----------YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
YAK G ++EA L+F M +D++ WN +I Y++N NE L LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 239 LAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
L EK PDE T+ VL +C L A + GR IH Y+ + + V +LVDMY KCG+
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
L A +FD+I +D+V+W MI GY +HG+ +EA+ LF++M G++ +++FV++L A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C HSGLV +GW FN+M++ +EP +EH+ C+V++L R G L + Y + M PD+
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
+WG LL CR+H +V L E++AE + ++G YVL++NIYA + W ++R +
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
G+ K PGCS IE+ R++ F+AGD +P++++I L ++ R+ GY+P T L
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALI 789
Query: 538 DIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKI 597
D E +KE +L HSEKLA+A G+IS+ G I++ KNLRVC DCH + K MSK+T R+I
Sbjct: 790 DAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREI 849
Query: 598 ITRDRNRFHHFENGSCSCGDYW 619
+ RD NRFH F++G CSC +W
Sbjct: 850 VLRDSNRFHQFKDGHCSCRGFW 871
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 167/376 (44%), Gaps = 44/376 (11%)
Query: 56 LNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQP 112
L KL Y++ G L + +F+ W +++ + S ++ + +M++
Sbjct: 131 LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG 190
Query: 113 VEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
VE +++TFS V + + +H ++K V LV Y + V SA
Sbjct: 191 VEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSAR 250
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
KVFD E RDV+ WN +I+ Y NG+
Sbjct: 251 KVFD---------------------------------EMTERDVISWNSIINGYVSNGLA 277
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
+ L +F +ML + D T+++V + C + GR +HS E R L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+DMY KCG LD A+ +F + DR VV++ SMI GYA G + EA++LF+EM G+ P
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMK-NGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
T AVL C L+ +G + +K N G + + + ++++ + G ++E +
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVF 455
Query: 408 RGMKTDPDSVLWGTLL 423
M+ D + W T++
Sbjct: 456 SEMRV-KDIISWNTII 470
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 45/278 (16%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQP-VEP 115
L Y+ G + + +F+ ++ W +II +S ++++ALS + +L + P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 116 NAFTFSSVLHGCNLQAA----RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ T + VL C +A R IH ++++ S +V+ LV YA+ G + A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
D+++ + LVS T M+ Y HG +EA
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEA--------------------------------- 584
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG--TALV 289
+ LF +M + DEI+ +++L +C G ++ G W + H+ +E V +V
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIV 643
Query: 290 DMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIH 326
DM + G L A + +N+ + D W +++ G IH
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 210 RDVVCWNVMIDEYAQNG-MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
R V N + + ++G + N LL ++ K D TL +VL C +L+ G+
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLL---CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+ +++ + ++ +G+ L MY CG L +A ++FD + + WN ++ A G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHF 387
++ LF +M GV+ TF V + V G ++ ++K+G+G + +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN- 234
Query: 388 GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+V + R++ + M T+ D + W +++
Sbjct: 235 -SLVAFYLKNQRVDSARKVFDEM-TERDVISWNSII 268
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 321/559 (57%), Gaps = 53/559 (9%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSDQAL---SFYARMLAQPVEPNAFTFSSVLHGCN---- 128
LF P P+ FL+ S+I + S L ++Y RML+ V P+ +TF+SV+ C
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
L+ + +HCH + YV LV T
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALV-------------------------------TF 151
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
Y+K G + AR +F+ M S +V WN ++ + QNG+ +E + +F +M PD
Sbjct: 152 YSKCGDMEGARQVFDRMPEKS--IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
T +++LS+C Q GA+ G W+H Y+ + + V++GTAL+++Y +CG + AR++FD +
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEM---CGMGVKPSDVTFVAVLTACGHSGLVS 365
+ +V AW +MI Y HGY ++A+ LF++M CG P++VTFVAVL+AC H+GLV
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG--PIPNNVTFVAVLSACAHAGLVE 327
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR-----GMKTDPDSVLWG 420
+G ++ M Y + P +EH CMV++LGRAG L+E Y + G T P LW
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP--ALWT 385
Query: 421 TLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
+L AC++H+N LG EIA+ +++ + G +V+LSNIYA SG + +R M +
Sbjct: 386 AMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 481 VEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIG 540
+ K+ G S+IEV N+ + F GD H ++ +IY LE + R K GY P ++ V+H +
Sbjct: 446 LRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVE 505
Query: 541 EEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITR 600
EE+KE +L HSEKLA+AFGL+ T I IVKNLR+C DCHS K +S ++ R+I R
Sbjct: 506 EEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVR 564
Query: 601 DRNRFHHFENGSCSCGDYW 619
D+ RFHHF+NGSCSC DYW
Sbjct: 565 DKLRFHHFQNGSCSCLDYW 583
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 46/270 (17%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFY 105
GLD + + L YS G + + +F+R P ++ W S++ +D+A+ +
Sbjct: 139 GLDTY--VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF 196
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNLQAARA----IHCHVIKFAVASAPYVSTGLVGAYARG 161
+M EP++ TF S+L C A + +H ++I + + T L+ Y+R
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRC 256
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
GDV A +VFD+M E ++ + TAM++ Y HG ++A LF ME D +
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI--------- 307
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN--- 278
P+ +T +AVLS+C G +E GR ++ +
Sbjct: 308 -----------------------PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIP 344
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
GVE V +VDM + G LD+A K +
Sbjct: 345 GVEHHV--CMVDMLGRAGFLDEAYKFIHQL 372
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/526 (40%), Positives = 317/526 (60%), Gaps = 11/526 (2%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+AL + M+ V P+ + S + C N+ ++ H +V++ S + L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
Y + +A ++FD MS +++V+ +++ Y ++G + A FE M +++V W
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP--EKNIVSW 437
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLA-EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
N +I Q + E + +F M + E V D +T++++ S+CG LGAL+ +WI+ Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI- 496
Query: 275 NHKNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
KNG++ VR+GT LVDM+ +CG + A IF+++ +RDV AW + I A+ G +E A
Sbjct: 497 -EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
+ LFD+M G+KP V FV LTAC H GLV +G EIF M +G+ P+ H+GCMV+
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
LLGRAG LEE L+ M +P+ V+W +LL ACR+ NV + AE I +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YVLLSN+YA++G W AKVR MK G+ K PG S I++ + HEF +GD HP+ +I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
ML+E++ R G+ P VL D+ E++K L HSEKLA+A+GLIS+ GTTI+I
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDY 618
VKNLRVC DCHS K SK+ R+II RD NRFH+ G CSCGD+
Sbjct: 796 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 45/285 (15%)
Query: 86 FLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARA----IHCH 138
F++ S+I ++ S ++A+ + RM+ + P+ +TF L C A+ IH
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 139 VIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREA 198
++K A +V LV YA G+ L A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGE-------------------------------LDSA 188
Query: 199 RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL-LLFRKMLAEKVRPDEITLLAVLSSC 257
R +F+ E R+VV W MI YA+ + + L FR + E+V P+ +T++ V+S+C
Sbjct: 189 RKVFD--EMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 258 GQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
+L LE+G +++++ N +G+EV + +ALVDMY KC ++D A+++FD ++
Sbjct: 247 AKLEDLETGEKVYAFIRN--SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH 360
N+M Y G + EAL +F+ M GV+P ++ ++ +++C
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N +I YA +G+ NE +LLF +M+ + PD+ T LS+C + A +G IH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
++ V +LV Y +CG LD ARK+FD + +R+VV+W SMI GYA ++++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 335 LFDEMC-GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKN 376
LF M V P+ VT V V++AC + G +++ ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 337/580 (58%), Gaps = 43/580 (7%)
Query: 81 PTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQP-VEPNAFTFSSVLHGC----NLQAA 132
P P+ F++ +++ +S SD+ +++ + M+ + V P++F+F+ V+ +L+
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYA-------------------------------RG 161
+HC +K + S +V T L+G Y RG
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
DV A ++FD+M R+ S ML Y K G L A+ +F E RD V W+ MI
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS--EMPHRDDVSWSTMIVG 243
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
A NG NE L FR++ + P+E++L VLS+C Q G+ E G+ +H +V
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVD-RDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
V V AL+DMY +CG++ AR +F+ + + R +V+W SMI G A+HG EEA+RLF+EM
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
GV P ++F+++L AC H+GL+ +G + F+ MK Y +EP+IEH+GCMV+L GR+G+L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
++ YD + M P +++W TLL AC H N+ L E++ + + + +SG VLLSN Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN 520
A +G W A +R M ++K S++EV +++F AG+ + + + L+E+
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEII 543
Query: 521 CRLKAN-GYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVC 579
RLK GYTP+ L+D+ EE+KE + HSEKLALAF L G I+IVKNLR+C
Sbjct: 544 LRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRIC 603
Query: 580 LDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
DCH+VMK+ SK+ G +I+ RDRNRFH F++GSCSC DYW
Sbjct: 604 RDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 324/556 (58%), Gaps = 10/556 (1%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVL 124
G + + L++ P +V T++I D+A + M E N T+++++
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR----ERNVVTWTTMI 210
Query: 125 HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTA 184
G + + + T ++ Y G + AE+ F+ M + +++ A
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
M+ + + G + +AR +F+ ME RD W MI Y + G E L LF +M + VR
Sbjct: 271 MIVGFGEVGEISKARRVFDLME--DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
P +L+++LS C L +L+ GR +H+++ + +V V + L+ MY KCG L A+ +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD +D++ WNS+I GYA HG EEAL++F EM G P+ VT +A+LTAC ++G +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
+G EIF M++ + + P +EH+ C V++LGRAG++++ +L+ M PD+ +WG LL
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 425 ACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
AC+ H + L E A+ + + ++GTYVLLS+I A+ W A VR M+ + V K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568
Query: 485 PGCSIIEVNNRIHEFIAGDLR-HPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQ 543
PGCS IEV ++H F G ++ HP+ I +MLE+ + L+ GY+P VLHD+ EE+
Sbjct: 569 PGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEE 628
Query: 544 KELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRN 603
K SL HSE+LA+A+GL+ G I+++KNLRVC DCH+ +K++SK+T R+II RD N
Sbjct: 629 KVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDAN 688
Query: 604 RFHHFENGSCSCGDYW 619
RFHHF NG CSC DYW
Sbjct: 689 RFHHFNNGECSCRDYW 704
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 173/391 (44%), Gaps = 22/391 (5%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSV 123
Y S G + LF+ NV W ++ + + + P E N +++++
Sbjct: 58 YFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP-ERNVVSWTAM 116
Query: 124 LHGCNLQAARAIHCHVIKFAVASAPYVS-TGLVGAYARGGDVFSAEKVFDEMSERSLVSV 182
+ G +Q + + + VS T + G G + A K++D M + +V+
Sbjct: 117 VKG-YMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS 175
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
T M+ + GR+ EARL+F+ M R+VV W MI Y QN + LF +++ EK
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMR--ERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEK 232
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
E++ ++L G +E + V A++ + + G + AR
Sbjct: 233 T---EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP----VIACNAMIVGFGEVGEISKAR 285
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
++FD + DRD W MI Y G+ EAL LF +M GV+PS + +++L+ C
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 363 LVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
+ G ++ +L++ + + + ++ + + G L + LV + D ++W +
Sbjct: 346 SLQYGRQVHAHLVRCQF--DDDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNS 402
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
++ H LGEE + H + SSGT
Sbjct: 403 IISGYASH---GLGEEALKIF--HEMPSSGT 428
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
+V Y G A ++FDEMSER++VS +++ Y K+ + EAR +FE M R+VV
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP--ERNVV 111
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
W M+ Y Q GM E LF +M +E++ + G ++ R ++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+V T ++ C+ G +D+AR IFD + +R+VV W +MI GY + + A
Sbjct: 168 PVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
+LF+ M + ++V++ ++L SG + E F +M M+P I +V
Sbjct: 224 KLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVIACNAMIVGF 275
Query: 394 --LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA 425
+G + +DL+ D D+ W ++ A
Sbjct: 276 GEVGEISKARRVFDLME----DRDNATWRGMIKA 305
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 316/566 (55%), Gaps = 39/566 (6%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTP-TPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEP 115
L +YS + ++ LF NV WT++I +D +A+ ++ M + V P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 116 NAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
N FT+S +L + + +H V+K
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQVVKTNY------------------------------- 424
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
ERS TA+L Y K G++ EA +F G+ D +D+V W+ M+ YAQ G + +F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGI--DDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGA-LESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
++ ++P+E T ++L+ C A + G+ H + + + V +AL+ MY K
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
G+++ A ++F ++D+V+WNSMI GYA HG + +AL +F EM VK VTF+ V
Sbjct: 543 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 602
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
AC H+GLV +G + F++M + P EH CMV+L RAG+LE+ ++ M
Sbjct: 603 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
S +W T+L ACR+HK LG AE I++ S YVLLSN+YA SG+W AKVR
Sbjct: 663 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 722
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDL 534
LM V+KEPG S IEV N+ + F+AGD HP IY+ LE+++ RLK GY P T
Sbjct: 723 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Query: 535 VLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
VL DI +E KE L HSE+LA+AFGLI+T G+ + I+KNLRVC DCH V+K+++KI
Sbjct: 783 VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEE 842
Query: 595 RKIITRDRNRFHHF-ENGSCSCGDYW 619
R+I+ RD NRFHHF +G CSCGD+W
Sbjct: 843 REIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 43/370 (11%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPN 116
L +Y + +F+ NV WT++I + S +D+ L+ + RM + +PN
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 117 AFTFSSVLHGCNLQA--ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
+FTF++ L + R + H + V GL
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTV--------VVKNGL-------------------- 225
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
++++ +++ Y K G +R+AR+LF+ E S VV WN MI YA NG+ E L +
Sbjct: 226 -DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS--VVTWNSMISGYAANGLDLEALGM 282
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F M VR E + +V+ C L L +H V + + + TAL+ Y K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 295 CGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
C ++ DA ++F I +VV+W +MI G+ + EEA+ LF EM GV+P++ T+
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
+LTA ++S ++K Y + +++ + G++EE + G+ D
Sbjct: 403 ILTAL---PVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGID-D 456
Query: 414 PDSVLWGTLL 423
D V W +L
Sbjct: 457 KDIVAWSAML 466
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 44/304 (14%)
Query: 66 SVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTFSS 122
S L+++ LF+++P + + S++ S + +A + + +E + FSS
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 123 VLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
VL C+ R +HC IKF V T LV Y +G + KVFD
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD------ 152
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
E R+VV W +I YA+N M +E L LF +M
Sbjct: 153 ---------------------------EMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCKCG 296
E +P+ T A L + G G +H+ V KNG++ + V +L+++Y KCG
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV--VKNGLDKTIPVSNSLINLYLKCG 243
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
++ AR +FD + VV WNSMI GYA +G EAL +F M V+ S+ +F +V+
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 357 ACGH 360
C +
Sbjct: 304 LCAN 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+++A +FD+ R S ++L +++ GR +EA+ LF +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH----------------- 85
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
+ GM +C + + DE+ + C + G L+ +V
Sbjct: 86 RLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD----------------DVS 129
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
VGT+LVD Y K + D RK+FD + +R+VV W ++I GYA + ++E L LF M G
Sbjct: 130 VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
+P+ TF A L G+ +G ++ ++KN G++ I ++NL + G + +
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN--GLDKTIPVSNSLINLYLKCGNVRK 247
Query: 403 GYDLVRGMKTDPDSVL-WGTLL 423
L KT+ SV+ W +++
Sbjct: 248 ARILFD--KTEVKSVVTWNSMI 267
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/580 (38%), Positives = 332/580 (57%), Gaps = 20/580 (3%)
Query: 54 PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQA----LSFYARML 109
P+ N L Y G H++ +F+ P + W S++ A + ++ + F +
Sbjct: 39 PLAN-TLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGS 97
Query: 110 AQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
+ + P+ F FS+++ C ++ R +HCH I A+ V + LV YA+ G +
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
SA+ VFD + ++ +S TAM++ YAK GR EA LF + +++ W +I + Q+
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPV--KNLYSWTALISGFVQS 215
Query: 226 GMPNECLLLFRKMLAEKVRP-DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
G E +F +M E+V D + L +++ +C L A +GR +H V V +
Sbjct: 216 GKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFI 275
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
AL+DMY KC + A+ IF + RDVV+W S+I+G A HG +E+AL L+D+M GV
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGV 335
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
KP++VTFV ++ AC H G V KG E+F M YG+ P ++H+ C+++LLGR+G L+E
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 405 DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFIL-SHNLASSGTYVLLSNIYAAS 463
+L+ M PD W LL AC+ +G IA+ ++ S L TY+LLSNIYA++
Sbjct: 396 NLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASA 455
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML----EEM 519
W ++ R + V K+PG S +EV F AG+ HP +DI+ +L EEM
Sbjct: 456 SLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEM 515
Query: 520 NCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVC 579
R NGY P T +LHD+ E++KE L HSE+ A+A+GL+ PGT I+IVKNLRVC
Sbjct: 516 RIR---NGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVC 572
Query: 580 LDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
DCH V+K +S+IT R+II RD R+HHF+ G CSC D+W
Sbjct: 573 GDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
L A+A+H H++K + ++ LV Y + G A +VFDEM
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH----------- 66
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL-LLFRKMLAEKVRPD 246
RD + W ++ Q + + L + + +RPD
Sbjct: 67 ----------------------RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPD 104
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
+ A++ +C LG+++ GR +H + + + V ++LVDMY KCG L+ A+ +FD
Sbjct: 105 DFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFD 164
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
+I ++ ++W +M+ GYA G EEAL LF
Sbjct: 165 SIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 327/577 (56%), Gaps = 42/577 (7%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARM 108
P L +L Y L + + + P NV WT++I +S HS +AL+ +A M
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 109 LAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
+ +PN FTF++VL C L + IH ++K+ S +V + L
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL---------- 194
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
L YAK G+++EAR +FE + RDVV +I YAQ
Sbjct: 195 ---------------------LDMYAKAGQIKEAREIFECLP--ERDVVSCTAIIAGYAQ 231
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
G+ E L +F ++ +E + P+ +T ++L++ L L+ G+ H +V + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG- 343
+L+DMY KCG+L AR++FDN+ +R ++WN+M++GY+ HG E L LF M
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG-YGMEPKIEHFGCMVNLLGRAGRLEE 402
VKP VT +AVL+ C H + G IF+ M G YG +P EH+GC+V++LGRAGR++E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
++ ++ M + P + + G+LL ACR+H +V +GE + ++ ++G YV+LSN+YA+
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCR 522
+G W VR++M V KEPG S I+ +H F A D HP+ +++ ++E++ +
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 523 LKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDC 582
+K GY P VL+D+ EEQKE L HSEKLAL FGLI+T G I++ KNLR+C+DC
Sbjct: 532 MKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDC 591
Query: 583 HSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
H+ K+ SK+ R++ RD+NRFH +G CSCGDYW
Sbjct: 592 HNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 47/263 (17%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYAR 107
D H + L Y+ G + + +F P +V T+II ++ ++AL + R
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 108 MLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
+ ++ + PN T++S+L + L + HCHV++ + + L+ Y++ G+
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+ A ++FD M ER+ +S AML Y+KHG RE
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV------------------------- 339
Query: 224 QNGMPNECLLLFRKMLAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
L LFR M EK V+PD +TLLAVLS C ++G ++ + G
Sbjct: 340 --------LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG--LNIFDGMVAGEYGT 389
Query: 283 RVGT----ALVDMYCKCGSLDDA 301
+ GT +VDM + G +D+A
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEA 412
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 338/587 (57%), Gaps = 23/587 (3%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTP--TPNVFLWTSIIHAHSHSD---QALSFYA 106
P L+ L + Y+S G + + LF+ P + WT+++ + S ++ +
Sbjct: 41 PRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFV 100
Query: 107 RMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
M + VE + + + C +L A+ H +K V ++ V L+ Y + G
Sbjct: 101 EMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
V +++F+E+ E+S+VS T +L K L R +F E R+ V W VM+ Y
Sbjct: 161 LVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH--EMPERNAVAWTVMVAGY 218
Query: 223 AQNGMPNECLLLFRKMLAEKVRP-DEITLLAVLSSCGQLGALESGRWIHSY-------VG 274
G E L L +M+ + +TL ++LS+C Q G L GRW+H Y +G
Sbjct: 219 LGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMG 278
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
+ +V VGTALVDMY KCG++D + +F + R+VV WN++ G A+HG +
Sbjct: 279 EEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVID 338
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL 394
+F +M VKP D+TF AVL+AC HSG+V +GW F+ ++ YG+EPK++H+ CMV+LL
Sbjct: 339 MFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLL 396
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV 454
GRAG +EE L+R M P+ V+ G+LL +C +H V + E I ++ + ++ +
Sbjct: 397 GRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQI 456
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYL 514
L+SN+Y A G A +R ++ G+ K PG S I VN+ +H F +GD HP++++IYL
Sbjct: 457 LMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYL 516
Query: 515 MLEEMNCRLKANGYTPK-TDLVLHDIGE-EQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
L E+ R+++ GY P + LV H G+ E+KE +L HSEKLA+ FGL+ T+P T + +
Sbjct: 517 KLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLV 576
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
KNLR+C DCHS MK++SK+ R+II RDRNRFH F+ GSCSC DYW
Sbjct: 577 FKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/563 (35%), Positives = 315/563 (55%), Gaps = 46/563 (8%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYA------RMLAQPVEP--NAFTFS 121
+++S +F++ P + ++I A S S + R + P P ++F
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 122 SVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVS 181
+ +L IH + S + T L+ Y+ + A KVFDE+ +R
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR---- 177
Query: 182 VTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE 241
D V WNV+ Y +N + L+LF KM +
Sbjct: 178 -----------------------------DTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 242 K---VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
V+PD +T L L +C LGAL+ G+ +H ++ + + + LV MY +CGS+
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
D A ++F + +R+VV+W ++I G A++G+ +EA+ F+EM G+ P + T +L+AC
Sbjct: 269 DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Query: 359 GHSGLVSKGWEIFNLMKNG-YGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
HSGLV++G F+ M++G + ++P + H+GC+V+LLGRA L++ Y L++ M+ PDS
Sbjct: 329 SHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDST 388
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
+W TLL ACR+H +V LGE + ++ +G YVLL N Y+ G W ++RSLMK
Sbjct: 389 IWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMK 448
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
+ +PGCS IE+ +HEFI D+ HP+ ++IY ML E+N +LK GY + LH
Sbjct: 449 EKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELH 508
Query: 538 DI-GEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRK 596
++ EE+K +L HSEKLA+AFG++ T PGTTI++ KNLR C+DCH+ K +S + R
Sbjct: 509 NLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRI 568
Query: 597 IITRDRNRFHHFENGSCSCGDYW 619
+I RDR+RFHHF+ GSCSC D+W
Sbjct: 569 VIVRDRSRFHHFKGGSCSCNDFW 591
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 313/577 (54%), Gaps = 43/577 (7%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARML 109
H + +L Y +GH + LF+ P ++ W S+I +S + + +RM+
Sbjct: 65 HGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMM 124
Query: 110 AQPV--EPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
V PN TF S++ C + + R IH V+KF V V + Y + GD
Sbjct: 125 ISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD 184
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+ S+ K LFE + +++V WN MI +
Sbjct: 185 LTSSCK-------------------------------LFEDLSI--KNLVSWNTMIVIHL 211
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
QNG+ + L F PD+ T LAVL SC +G + + IH +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
+ TAL+D+Y K G L+D+ +F I D +AW +M+ YA HG+ +A++ F+ M G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
+ P VTF +L AC HSGLV +G F M Y ++P+++H+ CMV+LLGR+G L++
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 404 YDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAAS 463
Y L++ M +P S +WG LL ACR++K+ LG + AE + YV+LSNIY+AS
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRL 523
G W A+++R+LMK G+ + GCS IE N+IH+F+ GD HP+S+ I L+E+ ++
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 524 KAN-GYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDC 582
K+ GY KT+ VLHD+GE+ KE + HSEK+A+AFGL+ P I I KNLR+C DC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 583 HSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
H K +S I R+II RD RFHHF +GSCSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 40/325 (12%)
Query: 109 LAQPVEPNAFTFSSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
++ N + + + C +++ R +HC V+K ++ LVG Y R G A
Sbjct: 26 FVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
EK+FDEM ER LVS WN +I Y+ G
Sbjct: 86 EKLFDEMPERDLVS---------------------------------WNSLISGYSGRGY 112
Query: 228 PNECLLLFRKMLAEKV--RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
+C + +M+ +V RP+E+T L+++S+C G+ E GR IH V EV+V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
A ++ Y K G L + K+F+++ +++V+WN+MI+ + +G +E+ L F+ +G +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
P TF+AVL +C G+V I L M G+ I +++L + GRLE+
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT--TALLDLYSKLGRLEDSS 290
Query: 405 DLVRGMKTDPDSVLWGTLLWACRLH 429
+ + T PDS+ W +L A H
Sbjct: 291 TVFHEI-TSPDSMAWTAMLAAYATH 314
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 323/558 (57%), Gaps = 41/558 (7%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHG 126
++++ ++F P F + ++I + + ++AL FY M+ + EP+ FT+ +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 127 C----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSV 182
C +++ + IH V K + + +V L+ Y R G++ + VF+++
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL-------- 193
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE- 241
+S+ W+ M+ A GM +ECLLLFR M +E
Sbjct: 194 -------------------------ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSET 228
Query: 242 KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
++ +E +++ L +C GAL G IH ++ + + + + V T+LVDMY KCG LD A
Sbjct: 229 NLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKA 288
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS 361
IF + R+ + +++MI G A+HG E ALR+F +M G++P V +V+VL AC HS
Sbjct: 289 LHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHS 348
Query: 362 GLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
GLV +G +F M +EP EH+GC+V+LLGRAG LEE + ++ + + + V+W T
Sbjct: 349 GLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRT 408
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGV 481
L CR+ +N+ LG+ A+ +L + + G Y+L+SN+Y+ W A+ R+ + G+
Sbjct: 409 FLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGL 468
Query: 482 EKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGE 541
++ PG SI+E+ + H F++ D HPK ++IY ML +M +LK GY+P +L ++ E
Sbjct: 469 KQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDE 528
Query: 542 EQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRD 601
E+K+ L+ HS+K+A+AFGL+ T PG+ IKI +NLR+C DCH+ K +S I R+I+ RD
Sbjct: 529 EEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRD 588
Query: 602 RNRFHHFENGSCSCGDYW 619
RNRFH F+ G+CSC DYW
Sbjct: 589 RNRFHLFKGGTCSCKDYW 606
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 27/274 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARM 108
GL+ + L Y G + S +F + + W+S++ A + + ++
Sbjct: 162 GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA----GMGMWSEC 217
Query: 109 LAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
L F + NL+A + + SA ++ GA G +
Sbjct: 218 L--------LLFRGMCSETNLKAEES--------GMVSA-LLACANTGALNLGMSIHGF- 259
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
+ +SE +++ T+++ Y K G L +A +F+ ME R+ + ++ MI A +G
Sbjct: 260 -LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME--KRNNLTYSAMISGLALHGEG 316
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHS-YVGNHKNGVEVRVGTA 287
L +F KM+ E + PD + ++VL++C G ++ GR + + + K
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC 376
Query: 288 LVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMI 320
LVD+ + G L++A + +I ++++ V W + +
Sbjct: 377 LVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 317/566 (56%), Gaps = 45/566 (7%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFT 119
+YS + + LF R ++ W +++ ++ S + L +A M Q + FT
Sbjct: 461 AYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
++V C + + +H + IK +VS+G++ Y + GD+ +A+ FD +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
D V W MI +NG +F
Sbjct: 580 ---------------------------------VPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 236 RKMLAEKVRPDEITL--LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYC 293
+M V PDE T+ LA SSC L ALE GR IH+ + VGT+LVDMY
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSC--LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
KCGS+DDA +F I ++ AWN+M++G A HG +E L+LF +M +G+KP VTF+
Sbjct: 665 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
VL+AC HSGLVS+ ++ M YG++P+IEH+ C+ + LGRAG +++ +L+ M +
Sbjct: 725 VLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Query: 414 PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVR 473
+ ++ TLL ACR+ + G+ +A +L S YVLLSN+YAA+ W R
Sbjct: 785 ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLAR 844
Query: 474 SLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTD 533
++MKG V+K+PG S IEV N+IH F+ D + +++ IY +++M +K GY P+TD
Sbjct: 845 TMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETD 904
Query: 534 LVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKIT 593
L D+ EE+KE +L HSEKLA+AFGL+ST P T I+++KNLRVC DCH+ MK ++K+
Sbjct: 905 FTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVY 964
Query: 594 GRKIITRDRNRFHHFENGSCSCGDYW 619
R+I+ RD NRFH F++G CSCGDYW
Sbjct: 965 NREIVLRDANRFHRFKDGICSCGDYW 990
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 45/371 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ GLD ++ L Y + + T+F+ ++ W S+I + + +A+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN-----LQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ ++L ++P+ +T +SVL + L ++ +H H IK S +VST L+ AY
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+R C ++EA +LFE + D+V WN M
Sbjct: 463 SRN-------------------------RC------MKEAEILFE---RHNFDLVAWNAM 488
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+ Y Q+ ++ L LF M + R D+ TL V +CG L A+ G+ +H+Y
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+++ V + ++DMY KCG + A+ FD+I D VAW +MI G +G E A +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRA 397
M MGV P + T + A + +G +I N +K +P + +V++ +
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKC 666
Query: 398 GRLEEGYDLVR 408
G +++ Y L +
Sbjct: 667 GSIDDAYCLFK 677
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 49/390 (12%)
Query: 49 GLDPHPI---LNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---AL 102
GL+P+ I L ++ S G + + + + + + HS Q L
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+A M+ VE + TF +L +L + +HC +K + VS L+ Y
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+ A VFD MSE RD++ WN +
Sbjct: 361 CKLRKFGFARTVFDNMSE---------------------------------RDLISWNSV 387
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG-ALESGRWIHSYVGNHK 277
I AQNG+ E + LF ++L ++PD+ T+ +VL + L L + +H +
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
N + V TAL+D Y + + +A +F+ + D+VAWN+M+ GY + L+LF
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGR 396
M G + D T V CG +++G ++ +K+GY ++ + ++++ +
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVK 564
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
G + + PD V W T++ C
Sbjct: 565 CGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 27/248 (10%)
Query: 266 GRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYA- 324
G+ H+ + + E + L+ MY KCGSL AR++FD + DRD+V+WNS++ YA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 325 ----IHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW--EIFNLMKNGY 378
+ ++A LF + V S +T +L C HSG V W E F+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGYACKI 174
Query: 379 GMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEI 438
G++ G +VN+ + G+++EG L M D VLW +L A + + EE
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA---YLEMGFKEEA 230
Query: 439 AEFILSHNLASSG------TYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEV 492
+ LS SSG T LL+ I SG+ A +V+S G+ + II
Sbjct: 231 ID--LSSAFHSSGLNPNEITLRLLARI---SGDDSDAGQVKSFANGN--DASSVSEIIFR 283
Query: 493 NNRIHEFI 500
N + E++
Sbjct: 284 NKGLSEYL 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 201/532 (37%), Gaps = 116/532 (21%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS--------DQAL 102
+P L L YS G L ++ +F++ P ++ W SI+ A++ S QA
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ + V + T S +L C + A+ + H + K +
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL-------------- 176
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
GD F A A++ Y K G+++E ++LFE M RDVV WN+M
Sbjct: 177 --DGDEFVA---------------GALVNIYLKFGKVKEGKVLFEEMPY--RDVVLWNLM 217
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+ Y + G E + L + + P+EITL R + G+ +
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL----------------RLLARISGDDSD 261
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+V+ + +DA + +++ N + Y G L+ F +
Sbjct: 262 AGQVK----------SFANGNDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFAD 305
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M V+ VTF+ +L ++ G ++ + M G++ + ++N+ +
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQV-HCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG----TYV 454
+ + M ++ D + W +++ + +N G E+ L L G Y
Sbjct: 365 KFGFARTVFDNM-SERDLISWNSVIAG--IAQN---GLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDL-----RHPKS 509
+ S + AAS SL +G + K+ I++NN F++ L R+
Sbjct: 419 MTSVLKAAS----------SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 510 QDIYLMLEEMNCRLKA-----NGYTPKTD--------LVLHDIGEEQKELSL 548
++ ++ E N L A GYT D ++H GE + +L
Sbjct: 469 KEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 308/573 (53%), Gaps = 46/573 (8%)
Query: 55 ILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQ 111
IL+F YS + + LF+ P + + +I ++S +DQ +L F+ M
Sbjct: 291 ILDF-----YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 345
Query: 112 PVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
+ F F+++L + +LQ R +HC + S +V LV YA+
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC------ 399
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
EM E EA L+F+ + R V W +I Y Q G+
Sbjct: 400 -----EMFE--------------------EAELIFKSLP--QRTTVSWTALISGYVQKGL 432
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
L LF KM +R D+ T VL + +L G+ +H+++ N V G+
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
LVDMY KCGS+ DA ++F+ + DR+ V+WN++I +A +G E A+ F +M G++P
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
V+ + VLTAC H G V +G E F M YG+ PK +H+ CM++LLGR GR E L+
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILS-HNLASSGTYVLLSNIYAASGNW 466
M +PD ++W ++L ACR+HKN SL E AE + S L + YV +SNIYAA+G W
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672
Query: 467 VGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKAN 526
V+ M+ G++K P S +EVN++IH F + D HP +I + E+ ++
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Query: 527 GYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVM 586
GY P T V+ D+ E+ K SL+ HSE+LA+AF LIST G I ++KNLR C DCH+ +
Sbjct: 733 GYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792
Query: 587 KMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
K++SKI R+I RD +RFHHF G CSCGDYW
Sbjct: 793 KLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 160/385 (41%), Gaps = 42/385 (10%)
Query: 49 GLDPHPILNFK--LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
G D +P L L +SY V L + LF P + + ++I + +++
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVAS---APYVSTGLVGAYAR 160
+ +M +P+ FTFS VL +A +H FA+ A V+TG +
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVL-----KAVVGLH----DFALGQQLHALSVTTGFSRDASV 287
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
G + L Y+KH R+ E R+LF+ M D V +NV+I
Sbjct: 288 GNQI---------------------LDFYSKHDRVLETRMLFDEMP--ELDFVSYNVVIS 324
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
Y+Q L FR+M +LS L +L+ GR +H
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ VG +LVDMY KC ++A IF ++ R V+W ++I GY G L+LF +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
G ++ TF VL A + G ++ + +E G +V++ + G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSI 503
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWA 425
++ + M D ++V W L+ A
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 8/230 (3%)
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
R + +IK + S +V R G V +A KV+DEM ++ VS M++ + K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK--VRPDEITL 250
G + AR LF+ M R VV W +++ YA+N +E LFR+M PD +T
Sbjct: 93 GDVSSARDLFDAMP--DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 251 LAVLSSCGQLGALESGRWIHSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
+L C + +H++ +G N + V L+ YC+ LD A +F+
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF-LTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
I ++D V +N++I GY G E++ LF +M G +PSD TF VL A
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 261 GALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMI 320
G + + R ++ + HKN V ++ + K G + AR +FD + DR VV W ++
Sbjct: 62 GQVSAARKVYDEMP-HKNTVST---NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 321 MGYAIHGYSEEALRLFDEMCGMG--VKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNG 377
YA + + +EA +LF +MC P VTF +L C + + ++ +K G
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 378 YGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE 437
+ P + ++ RL+ L + + DSV + TL+ K+ E
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP-EKDSVTFNTLITG--YEKDGLYTES 234
Query: 438 IAEFILSHNLASSGTYVLLSNIYAAS---GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNN 494
I F+ + S + A ++ ++ +L +G ++ V N
Sbjct: 235 IHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS-----VGN 289
Query: 495 RIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDI------GEEQKELSL 548
+I +F + +H + + ++ +EM P+ D V +++ +Q E SL
Sbjct: 290 QILDFYS---KHDRVLETRMLFDEM----------PELDFVSYNVVISSYSQADQYEASL 336
Query: 549 EVHSEKLALAFGLISTRPGTTIKIVKNL 576
E + F + T + I NL
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANL 364
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 306/525 (58%), Gaps = 8/525 (1%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLV 155
+AL RM++ +E + FT+ SV+ C LQ + +H +V++ S + LV
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLV 327
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
Y + G A +F++M + LVS A+L+ Y G + EA+L+F+ M+ ++++ W
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK--EKNILSW 385
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+MI A+NG E L LF M E P + + SC LGA +G+ H+ +
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+ G AL+ MY KCG +++AR++F + D V+WN++I HG+ EA+ +
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
++EM G++P +T + VLTAC H+GLV +G + F+ M+ Y + P +H+ +++LL
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLC 565
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
R+G+ + ++ + P + +W LL CR+H N+ LG A+ + GTY+L
Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYML 625
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLM 515
LSN++AA+G W A+VR LM+ GV+KE CS IE+ ++H F+ D HP+++ +Y+
Sbjct: 626 LSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIY 685
Query: 516 LEEMNCRLKANGYTPKTDLVLHDIGEE-QKELSLEVHSEKLALAFGLISTRPGTTIKIVK 574
L+++ ++ GY P T VLHD+ + KE L HSEK+A+AFGL+ PGTTI+I K
Sbjct: 686 LQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFK 745
Query: 575 NLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
NLR C DCH+ + +S + R II RDR RFHHF NG CSCG++W
Sbjct: 746 NLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 206/445 (46%), Gaps = 55/445 (12%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT--PNVFLWTSIIHAHSHSDQ---ALSFY 105
+P I + Y + G + + +F + P + ++ ++I SH++ A++ +
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVAS----APY---VSTGLVGAY 158
+M + +P+ FTF+SVL G L A C ++F A+ A Y VS LV Y
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQC--VQFHAAALKSGAGYITSVSNALVSVY 194
Query: 159 ARGGD----VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
++ + SA KVFDE+ E+ S T M+T Y K+G L EGM+ D+ +V
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD-DNMKLVA 253
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N MI Y G E L + R+M++ + DE T +V+ +C G L+ G+ +H+YV
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGY----------- 323
++ +LV +Y KCG D+AR IF+ + +D+V+WN+++ GY
Sbjct: 314 RRED-FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 324 --------------------AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGL 363
A +G+ EE L+LF M G +P D F + +C G
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 364 VSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
G + L+K G+ + + ++ + + G +EE + R M DSV W L
Sbjct: 433 YCNGQQYHAQLLKIGF--DSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNAL 489
Query: 423 LWACRLHKNVSLGEEIAEFILSHNL 447
+ A H + + ++ E +L +
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGI 514
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 48/341 (14%)
Query: 124 LHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVT 183
L +LQ ARA+H ++I F ++ L+ Y + ++ A ++FDE+SE ++ T
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV 243
M++ Y G + AR +FE RD V +N MI ++ N + LF KM E
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 244 RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCKCGS---- 297
+PD T +VL+ L A + + + + K+G V ALV +Y KC S
Sbjct: 145 KPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 298 LDDARKIFDNIVDRD--------------------------------VVAWNSMIMGYAI 325
L ARK+FD I+++D +VA+N+MI GY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI--FNLMKNGYGMEPK 383
G+ +EAL + M G++ + T+ +V+ AC +GL+ G ++ + L + +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF--- 320
Query: 384 IEHF-GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
HF +V+L + G+ +E + M D V W LL
Sbjct: 321 --HFDNSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALL 358
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 319/565 (56%), Gaps = 41/565 (7%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFT 119
SY+ G L ++ +F+ + V W ++I H+ S+ +L + +M + P++FT
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
S+L C+ L+ + +H +I+
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIR-------------------------------NWL 527
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
ER L ++L+ Y G L + LF+ ME + +V WN +I Y QNG P+ L +F
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAME--DKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
R+M+ ++ I+++ V +C L +L GR H+Y H + + +L+DMY K
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
GS+ + K+F+ + ++ +WN+MIMGY IHG ++EA++LF+EM G P D+TF+ VL
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV-RGMKTDP 414
TAC HSGL+ +G + MK+ +G++P ++H+ C++++LGRAG+L++ +V M +
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
D +W +LL +CR+H+N+ +GE++A + YVLLSN+YA G W KVR
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDL 534
M + K+ GCS IE+N ++ F+ G+ ++I + + ++ GY P T
Sbjct: 826 RMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMS 885
Query: 535 VLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
V HD+ EE+K L HSEKLAL +GLI T GTTI++ KNLR+C+DCH+ K++SK+
Sbjct: 886 VQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVME 945
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
R+I+ RD RFHHF+NG CSCGDYW
Sbjct: 946 REIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 189/446 (42%), Gaps = 91/446 (20%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQP-VEPNAFT 119
Y+ G S +F+ + N+F W ++I ++S + D+ L + M++ + P+ FT
Sbjct: 130 YAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFT 189
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+ V+ C ++ A+H V+K TGLV DVF
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVK----------TGLVE------DVFVG-------- 225
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
A+++ Y HG + +A LF+ M R++V WN MI ++ NG E LL
Sbjct: 226 -------NALVSFYGTHGFVTDALQLFDIMP--ERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 236 RKMLAEK----VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
+M+ E PD TL+ VL C + + G+ +H + + E+ + AL+DM
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG--VKPSDV 349
Y KCG + +A+ IF +++VV+WN+M+ G++ G + + +M G VK +V
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL----GRAGRLEEGYD 405
T + + C H + E+ + Y ++ + + + N + G L
Sbjct: 397 TILNAVPVCFHESFLPSLKEL-----HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 406 LVRGMKTD----------------------------------PDSVLWGTLLWACRLHKN 431
+ G+++ PDS +LL AC K+
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 432 VSLGEEIAEFILSHNLASSGTYVLLS 457
+ LG+E+ FI+ N +V LS
Sbjct: 512 LRLGKEVHGFII-RNWLERDLFVYLS 536
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 176/393 (44%), Gaps = 52/393 (13%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALSFYA 106
LD +LN L YS G + ++ +F NV W +++ A +
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 107 RMLA--QPVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
+MLA + V+ + T + + H L + + +HC+ +K
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK------------------- 423
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
E V++E+ + V+ YAK G L A+ +F G+ S+ V WN +I
Sbjct: 424 ------QEFVYNELVANAFVA------SYAKCGSLSYAQRVFHGIR--SKTVNSWNALIG 469
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
+AQ+ P L +M + PD T+ ++LS+C +L +L G+ +H ++ +
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
++ V +++ +Y CG L + +FD + D+ +V+WN++I GY +G+ + AL +F +M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE---HFGC-MVNLLGR 396
G++ ++ + V AC + G E + Y ++ +E C ++++ +
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
G + + + G+K + + W ++ +H
Sbjct: 645 NGSITQSSKVFNGLK-EKSTASWNAMIMGYGIH 676
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
V T ++T YA G ++R +F+ + S+++ WN +I Y++N + +E L F +M+
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALR--SKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 240 AE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
+ + PD T V+ +C + + G +H V +V VG ALV Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC---GMGVKPSDV-TFVAV 354
DA ++FD + +R++V+WNSMI ++ +G+SEE+ L EM G G DV T V V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 355 LTACG 359
L C
Sbjct: 299 LPVCA 303
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 328/590 (55%), Gaps = 44/590 (7%)
Query: 72 HSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCN 128
+S+++F + N F+ ++I ++ + ++ + ML V+P+ TF VL +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 129 LQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE----------- 173
RA+H +K V +V LV YA+ G + A +VF+E
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 174 ------------------------MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS 209
M ER+ S + ++ Y G L A+ LFE M
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP--E 255
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
++VV W +I+ ++Q G + + +ML + ++P+E T+ AVLS+C + GAL SG I
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS 329
H Y+ ++ ++ +GTALVDMY KCG LD A +F N+ +D+++W +MI G+A+HG
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRF 375
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGC 389
+A++ F +M G KP +V F+AVLTAC +S V G F+ M+ Y +EP ++H+
Sbjct: 376 HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL 435
Query: 390 MVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS 449
+V+LLGRAG+L E ++LV M +PD W L AC+ HK E +++ +L +
Sbjct: 436 VVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPEL 495
Query: 450 SGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKS 509
G+Y+ L +A+ GN K R ++ E+ G S IE++ ++++F AGD H +
Sbjct: 496 CGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLT 555
Query: 510 QDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTT 569
Q+I L L+E+ GY P D +HDI EE+KE +HSEKLAL G + T PGTT
Sbjct: 556 QEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTT 615
Query: 570 IKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
I+I+KNLR+C DCHS+MK +SKI+ R I+ RD +FHHF++G CSCGDYW
Sbjct: 616 IRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 49/298 (16%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPN 116
L + Y G L+ + LF P NV WT++I+ S + + A+S Y ML + ++PN
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 117 AFTFSSVLHGCNLQAARA----IHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
+T ++VL C+ A IH +++ + + T LV YA+ G++ A VF
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
M+ + ++S TAM+ +A HGR +A + C
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQA-------------IQC------------------ 381
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDM 291
FR+M+ +PDE+ LAVL++C ++ G + S ++ ++ +VD+
Sbjct: 382 --FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 292 YCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIH-GY------SEEALRLFDEMCG 341
+ G L++A ++ +N+ ++ D+ W ++ H GY S+ L L E+CG
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCG 497
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 299/565 (52%), Gaps = 43/565 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQP-VEPNAFT 119
Y+ VG L + LF+ + + WT+++ + DQ AL Y+ M P PN FT
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 120 FS-----SVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
S + C ++ + IH H+++ + S + + L+ Y + G + A +FD++
Sbjct: 221 VSIAVAAAAAVKC-IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
E +DVV W MID Y ++ E L
Sbjct: 280 VE---------------------------------KDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F +++ RP+E T VL++C L E G+ +H Y+ ++LVDMY K
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG+++ A+ + D D+V+W S+I G A +G +EAL+ FD + G KP VTFV V
Sbjct: 367 CGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNV 426
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L+AC H+GLV KG E F + + + +H+ C+V+LL R+GR E+ ++ M P
Sbjct: 427 LSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 486
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
LW ++L C + N+ L EE A+ + + TYV ++NIYAA+G W K+R
Sbjct: 487 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRK 546
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDL 534
M+ GV K PG S E+ + H FIA D HP I L E+ ++K GY P T L
Sbjct: 547 RMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSL 606
Query: 535 VLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
VLHD+ +EQKE +L HSEKLA+AF ++ST GT IK+ KNLR C+DCH +K +S IT
Sbjct: 607 VLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITK 666
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
RKI RD RFH FENG CSCGDYW
Sbjct: 667 RKITVRDSTRFHCFENGQCSCGDYW 691
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 171/361 (47%), Gaps = 11/361 (3%)
Query: 107 RMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
++L + +P A T+ +++ C+ L+ + +H H+ + L+ YA+ G
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
+ A KVFDEM R L S M+ YA+ G L EAR LF+ E +D W M+ Y
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD--EMTEKDSYSWTAMVTGY 192
Query: 223 AQNGMPNECLLLFRKML-AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
+ P E L+L+ M RP+ T+ +++ + + G+ IH ++ +
Sbjct: 193 VKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ ++L+DMY KCG +D+AR IFD IV++DVV+W SMI Y E LF E+ G
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
+P++ TF VL AC G ++ M G +P +V++ + G +E
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIE 371
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
+V G PD V W +L+ C +N E + F L + +V N+ +
Sbjct: 372 SAKHVVDGC-PKPDLVSWTSLIGGCA--QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 462 A 462
A
Sbjct: 429 A 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 135/326 (41%), Gaps = 45/326 (13%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
R GLD +L L Y G + + +F++ +V WTS+I + S + S
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++ ++ PN +TF+ VL+ C + + +H ++ + + S+ LV Y
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ SA+ V D + LVS W +I
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVS---------------------------------WTSLI 392
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKN 278
AQNG P+E L F +L +PD +T + VLS+C G +E G + +S H+
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
T LVD+ + G + + + + + W S++ G + +G + A
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 338 EMCGMGVKPSD-VTFVAVLTACGHSG 362
E+ ++P + VT+V + +G
Sbjct: 513 EL--FKIEPENPVTYVTMANIYAAAG 536
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
DV+C ++ E Q +L +P T ++ C Q ALE G+ +H
Sbjct: 62 DVLCGQKLLREAVQ-------------LLGRAKKPPASTYCNLIQVCSQTRALEEGKKVH 108
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
++ + + L+ MY KCGSL DARK+FD + +RD+ +WN M+ GYA G E
Sbjct: 109 EHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLE 168
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA +LFDEM + ++ A++T + +++LM+ P I
Sbjct: 169 EARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 391 VNLLG-----RAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
V R G+ G+ + G+ D D VLW +L+
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGL--DSDEVLWSSLM 260
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/566 (37%), Positives = 321/566 (56%), Gaps = 42/566 (7%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH----SHSDQALSFYARMLAQP-VEPNAFT 119
S+ G + +F+R +V WT++I + + + +A++ ++ M+ Q VEPN FT
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 120 FSSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVG-AYARGGDVFSAEKVFDEMSER 177
FSS C NL S P V ++G A+ RG ++
Sbjct: 376 FSSAFKACGNL----------------SDPRVGKQVLGQAFKRG------------LASN 407
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
S V+ ++++ + K R+ +A+ FE + +++V +N +D +N + L +
Sbjct: 408 SSVA-NSVISMFVKSDRMEDAQRAFESLS--EKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
+ ++ T ++LS +G++ G IHS V V AL+ MY KCGS
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
+D A ++F+ + +R+V++W SMI G+A HG++ L F++M GVKP++VT+VA+L+A
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H GLVS+GW FN M + ++PK+EH+ CMV+LL RAG L + ++ + M D +
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
+W T L ACR+H N LG+ A IL + Y+ LSNIYA +G W + ++R MK
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
+ KE GCS IEV ++IH+F GD HP + IY L+ + +K GY P TDLVLH
Sbjct: 705 ERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLH 764
Query: 538 DIGEEQKELS----LEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKIT 593
+ EE E L HSEK+A+AFGLIST +++ KNLRVC DCH+ MK +S ++
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 594 GRKIITRDRNRFHHFENGSCSCGDYW 619
GR+I+ RD NRFHHF++G CSC DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 199/457 (43%), Gaps = 72/457 (15%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFN---RTPTPNVFLWTSIIHAHSHSDQ---ALS 103
++P +L L YS G + +F R +V W++++ + ++ + A+
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIK 152
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPY-----VSTGLVGAY 158
+ L + PN + +++V+ C+ + + F + + + V L+ +
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 159 ARGGDVF-SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
+G + F +A KVFD+MSE +VV W +
Sbjct: 213 VKGENSFENAYKVFDKMSEL---------------------------------NVVTWTL 239
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
MI Q G P E + F M+ D+ TL +V S+C +L L G+ +HS+ +
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA--IR 297
Query: 278 NGVEVRVGTALVDMYCKC---GSLDDARKIFDNIVDRDVVAWNSMIMGYAIH-GYSEEAL 333
+G+ V +LVDMY KC GS+DD RK+FD + D V++W ++I GY + + EA+
Sbjct: 298 SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 334 RLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMV 391
LF EM G V+P+ TF + ACG+ G ++ K G + + ++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN--SVI 415
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL-WACR---LHKNVSLGEEIAEFILSHNL 447
++ ++ R+E+ + ++ + V + T L CR + L EI E L
Sbjct: 416 SMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG--- 471
Query: 448 ASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
S+ T+ L + G A V S+ KG + +
Sbjct: 472 VSAFTFASLLS---------GVANVGSIRKGEQIHSQ 499
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 48/281 (17%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
AL AR +P++ + TFSS+L C + + + +H +I+F + + L+
Sbjct: 48 ALDLMARDGIRPMD--SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 157 AYARGGDVFSAEKVFDEM---SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
Y++ GD AE VF+ M +R +VS +AM+ CY +GR +A
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDA--------------- 150
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
+ +F + L + P++ AV+ +C + GR ++
Sbjct: 151 ------------------IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 274 GNHKNG---VEVRVGTALVDMYCKC-GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS 329
K G +V VG +L+DM+ K S ++A K+FD + + +VV W MI G+
Sbjct: 193 --MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
EA+R F +M G + T +V +AC +S G ++
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 17/266 (6%)
Query: 238 MLAEKVRP-DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M + +RP D +T ++L SC + G+ +H+ + + + +L+ +Y K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 297 SLDDARKIFDNIV---DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
A +F+ + RDVV+W++M+ Y +G +A+++F E +G+ P+D + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 354 VLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGC-MVNLLGRA-GRLEEGYDLVRGM 410
V+ AC +S V G LMK G+ E + GC ++++ + E Y + M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGH-FESDV-CVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 411 KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS-SGTYVLLSNIYAASG---NW 466
++ + V W ++ C + E F L L+ LS++++A N
Sbjct: 230 -SELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 467 VGAAKVRSLMKGSGVEKEPGCSIIEV 492
++ S SG+ + CS++++
Sbjct: 286 SLGKQLHSWAIRSGLVDDVECSLVDM 311
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/499 (40%), Positives = 297/499 (59%), Gaps = 18/499 (3%)
Query: 127 CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV---FDEMSERSLVSVT 183
C LQA H + K + P + V AY R + A ++ F +S + ++
Sbjct: 48 CVLQA----HAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSP-GVCNIN 102
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA-EK 242
++ K G A+ + A ++V+ WN+MI Y +N E L + ML+
Sbjct: 103 LIIESLMKIGESGLAKKVLRN--ASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
++P++ + + L++C +LG L +W+HS + + + + +ALVD+Y KCG + +R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
++F ++ DV WN+MI G+A HG + EA+R+F EM V P +TF+ +LT C H G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
L+ +G E F LM + ++PK+EH+G MV+LLGRAGR++E Y+L+ M +PD V+W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 423 LWACRLHKNVSLGEEIAEFILSHNL--ASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
L + R +KN LGE I NL A SG YVLLSNIY+++ W A KVR LM G
Sbjct: 341 LSSSRTYKNPELGE-----IAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEG 395
Query: 481 VEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIG 540
+ K G S +E IH F AGD H +++ IY +LE + + K+ G+ TDLVL D+
Sbjct: 396 IRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVS 455
Query: 541 EEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITR 600
EE+KE +L HSEKLALA+ ++ + PGT I+I KN+R+C DCH+ +K +SK+ R II R
Sbjct: 456 EEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMR 515
Query: 601 DRNRFHHFENGSCSCGDYW 619
DR RFH FE+G CSC DYW
Sbjct: 516 DRIRFHRFEDGLCSCRDYW 534
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 49/250 (19%)
Query: 84 NVFLWTSIIHAHSHS---DQALSFYARMLA-QPVEPNAFTFSSVLHGC----NLQAARAI 135
NV W +I + + ++AL ML+ ++PN F+F+S L C +L A+ +
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H +I + +S+ LV YA+ GD+ ++ +VF + + AM+T +A HG
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG-- 245
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLS 255
+ E + +F +M AE V PD IT L +L+
Sbjct: 246 -------------------------------LATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 256 SCGQLGALESGRWIHSYVG--NHKNGVEVRVG--TALVDMYCKCGSLDDARKIFDNI-VD 310
+C G LE G+ Y G + + ++ ++ A+VD+ + G + +A ++ +++ ++
Sbjct: 275 TCSHCGLLEEGK---EYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 311 RDVVAWNSMI 320
DVV W S++
Sbjct: 332 PDVVIWRSLL 341
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 317/567 (55%), Gaps = 40/567 (7%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPN 116
L +YS G + + +F+ ++ W ++I ++ + +AL + M + + +
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 117 AFTFSSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
FT SSVL C + + +HC +K + YV T
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT-------------------- 201
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
A+L YAK G +++A +FE M+ S V W+ M+ Y QN E L
Sbjct: 202 -----------ALLDLYAKCGMIKDAVQVFESMQDKSS--VTWSSMVAGYVQNKNYEEAL 248
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
LL+R+ + ++ TL +V+ +C L AL G+ +H+ + G V V ++ VDMY
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
KCGSL ++ IF + ++++ WN++I G+A H +E + LF++M G+ P++VTF
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
++L+ CGH+GLV +G F LM+ YG+ P + H+ CMV++LGRAG L E Y+L++ +
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF 428
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
DP + +WG+LL +CR++KN+ L E AE + ++G +VLLSNIYAA+ W AK
Sbjct: 429 DPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKS 488
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT 532
R L++ V+K G S I++ +++H F G+ HP+ ++I L+ + + + GY P
Sbjct: 489 RKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSV 548
Query: 533 DLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKI 592
+ LHD+ +KE L HSEKLAL FGL+ + ++I+KNLR+C+DCH MK S
Sbjct: 549 EHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMA 608
Query: 593 TGRKIITRDRNRFHHFENGSCSCGDYW 619
T R II RD NRFHHF +G CSCGD+W
Sbjct: 609 TRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%), Gaps = 12/271 (4%)
Query: 159 ARGGDVFSAE----KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
AR G V A+ K+ E + + ++ Y+K G + AR +F+GM R +V
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML--ERSLVS 129
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCG-QLGALESGRWIHSYV 273
WN MI Y +N M +E L +F +M E + E T+ +VLS+CG ALE + +H
Sbjct: 130 WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK-LHCLS 188
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+ + VGTAL+D+Y KCG + DA ++F+++ D+ V W+SM+ GY + EEAL
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGYGMEPKIEHFGCMVN 392
L+ M ++ + T +V+ AC + + +G ++ ++ K+G+G + V+
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA--SSAVD 306
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ + G L E Y + ++ + + LW T++
Sbjct: 307 MYAKCGSLRESYIIFSEVQ-EKNLELWNTII 336
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 36/297 (12%)
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD 312
+L C + GA+ + H + +V + L++ Y KCG ++ AR++FD +++R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 313 VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS--GLVSKGWEI 370
+V+WN+MI Y + EAL +F EM G K S+ T +VL+ACG + L K
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 371 FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHK 430
++ ++ + +++L + G +++ + M+ D SV W +++ +K
Sbjct: 187 LSVKT---CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNK 242
Query: 431 NVS-----------LGEEIAEFILSHNLASSGTYVLL----------------SNIYAAS 463
N + E +F LS + + L SN++ AS
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN 520
AK SL + + E +E+ N I I+G +H + +++ ++ E+M
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI---ISGFAKHARPKEVMILFEKMQ 356
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 327/582 (56%), Gaps = 43/582 (7%)
Query: 49 GLDPHP-ILNFKLQRSYSSV-GHLHHSVTLFNRTPT-PNVFLWTSIIHAHSHSDQALS-- 103
GL HP I N L+ SV G L H+ LF+ + P+ W +I S+S L+
Sbjct: 32 GLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSI 91
Query: 104 -FYARMLAQPV-EPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
FY RML V P+ FTF+ L C + S P + G+ R
Sbjct: 92 LFYNRMLLSSVSRPDLFTFNFALKSCE--------------RIKSIPKC-LEIHGSVIRS 136
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G + A + T+++ CY+ +G + A +F+ M RD+V WNVMI
Sbjct: 137 GFLDDA------------IVATSLVRCYSANGSVEIASKVFDEMPV--RDLVSWNVMICC 182
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
++ G+ N+ L ++++M E V D TL+A+LSSC + AL G +H + +
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
V V AL+DMY KCGSL++A +F+ + RDV+ WNSMI+GY +HG+ EA+ F +M
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
GV+P+ +TF+ +L C H GLV +G E F +M + + + P ++H+GCMV+L GRAG+LE
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
+++ D VLW TLL +C++H+N+ LGE + ++ ++G YVL+++IY+
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 422
Query: 462 ASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNC 521
A+ + A +R L++ ++ PG S IE+ +++H+F+ D HP+S IY L E+
Sbjct: 423 AANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVIN 482
Query: 522 RLKANGYTP----KTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLR 577
R GY P +T L D + S HSEKLA+A+GL+ T GTT++I KNLR
Sbjct: 483 RAILAGYKPEDSNRTAPTLSDRCLGSADTS---HSEKLAIAYGLMRTTAGTTLRITKNLR 539
Query: 578 VCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
VC DCHS K +SK R+II RDR RFHHF +G CSC DYW
Sbjct: 540 VCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 42/289 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
R G I+ L R YS+ G + + +F+ P ++ W +I SH +QALS
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
Y RM + V +++T ++L C L +H S +VS L+ YA
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + +A VF+ M +R +++ +M+ Y HG G+EA S
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG---------HGVEAIS---------- 295
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN- 278
FRKM+A VRP+ IT L +L C G ++ G + + +
Sbjct: 296 --------------FFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHL 341
Query: 279 GVEVRVGTALVDMYCKCGSLDDARK-IFDNIVDRDVVAWNSMIMGYAIH 326
V+ +VD+Y + G L+++ + I+ + D V W +++ IH
Sbjct: 342 TPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 314/564 (55%), Gaps = 44/564 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G + + +R +V L T++I +S +A+ + ML + V+PN +T+
Sbjct: 211 YVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTY 270
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+SVL C ++ + IH ++K SA
Sbjct: 271 ASVLISCGNLKDIGNGKLIHGLMVKSGFESA----------------------------- 301
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
L S T++LT Y + + ++ +F+ +E ++ V W +I QNG L+ FR
Sbjct: 302 --LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ--VSWTSLISGLVQNGREEMALIEFR 357
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
KM+ + ++P+ TL + L C L E GR IH V + + G+ L+D+Y KCG
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
D AR +FD + + DV++ N+MI YA +G+ EAL LF+ M +G++P+DVT ++VL
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC +S LV +G E+F+ + M +H+ CMV+LLGRAGRLEE +++ +PD
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEA-EMLTTEVINPDL 535
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
VLW TLL AC++H+ V + E I IL GT +L+SN+YA++G W +++S M
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDL-RHPKSQDIYLMLEEMNCRLKANGYTPKTDLV 535
K ++K P S +E+N H F+AGDL HP S+ I LEE+ + K GY V
Sbjct: 596 KDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCV 655
Query: 536 LHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGR 595
D+ E KE SL HSEKLA+AF + G +I+I+KNLRVC+DCHS +K++S++ R
Sbjct: 656 FQDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKR 714
Query: 596 KIITRDRNRFHHFENGSCSCGDYW 619
+II RD RFHHF +GSCSCGDYW
Sbjct: 715 EIICRDSKRFHHFRDGSCSCGDYW 738
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 45/311 (14%)
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
FS +L C ++ + I H++K A + LV A + GD+ A +VFD MS
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFP-AEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
E R +V WN +I ++ E + ++
Sbjct: 127 E---------------------------------RHIVTWNSLIAYLIKHRRSKEAVEMY 153
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR---VGTALVDMY 292
R M+ V PDE TL +V + L + + H G+EV VG+ALVDMY
Sbjct: 154 RLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVIL--GLEVSNVFVGSALVDMY 211
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
K G +A+ + D + ++DVV ++I+GY+ G EA++ F M V+P++ T+
Sbjct: 212 VKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 271
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
+VL +CG+ + G I LM G E + ++ + R +++ + + ++
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY 330
Query: 413 DPDSVLWGTLL 423
P+ V W +L+
Sbjct: 331 -PNQVSWTSLI 340
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 321/580 (55%), Gaps = 34/580 (5%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYA 106
+ G+D + ++ L Y+ G+L+ +F+ P + W SII A + S+++L
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL---- 498
Query: 107 RMLAQPVEPNAFTFSSVLHGCNLQAARAIH-CHVIKFAVASAPYVST--GLVGAYARGGD 163
P A C L A RA + I F+ + S G +G G
Sbjct: 499 --------PEAVV-------CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG-- 541
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+ + DE + + A++ CY K G + +F M A+ RD V WN MI Y
Sbjct: 542 LALKNNIADEATTEN-----ALIACYGKCGEMDGCEKIFSRM-AERRDNVTWNSMISGYI 595
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
N + + L L ML R D VLS+ + LE G +H+ +V
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
VG+ALVDMY KCG LD A + F+ + R+ +WNSMI GYA HG EEAL+LF+ M G
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 344 VKPSD-VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
P D VTFV VL+AC H+GL+ +G++ F M + YG+ P+IEHF CM ++LGRAG L++
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 403 GYDLVRGMKTDPDSVLWGTLLWAC-RLH-KNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
D + M P+ ++W T+L AC R + + LG++ AE + ++ YVLL N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN 520
AA G W K R MK + V+KE G S + + + +H F+AGD HP + IY L+E+N
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 521 CRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGT-TIKIVKNLRVC 579
+++ GY P+T L+D+ +E KE L HSEKLA+AF L + R T I+I+KNLRVC
Sbjct: 896 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 955
Query: 580 LDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
DCHS K +SKI GR+II RD NRFHHF++G+CSC D+W
Sbjct: 956 GDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 164/382 (42%), Gaps = 43/382 (11%)
Query: 55 ILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS-DQ--ALSFYARMLAQ 111
+ N + + +G + +++ F N W SII +S + DQ A ++ M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 112 PVEPNAFTFSS-VLHGCNLQAA-----RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
P +TF S V C+L I C + K + + +V +GLV A+A+ G +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
A KVF++M R+ V++ ++ + EA LF M N MID
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM----------NSMID----- 305
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV-GNHKNGVEVRV 284
+ E ++ E +E+ L+ GR +H +V V +
Sbjct: 306 -VSPESYVILLSSFPEYSLAEEV-------------GLKKGREVHGHVITTGLVDFMVGI 351
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
G LV+MY KCGS+ DAR++F + D+D V+WNSMI G +G EA+ + M +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
P T ++ L++C G +I +K G + + + ++ L G L E
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETGYLNEC 469
Query: 404 YDLVRGMKTDPDSVLWGTLLWA 425
+ M + D V W +++ A
Sbjct: 470 RKIFSSM-PEHDQVSWNSIIGA 490
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 40/248 (16%)
Query: 115 PNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
P +F S V H AAR H + K + Y+ L+ AY GD SA KVFDEM
Sbjct: 6 PLSFVQSCVGH---RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
R+ VS +++ Y+++G +EA L+
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEA---------------------------------LVF 89
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGA--LESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
R M+ E + ++ ++VL +C ++G+ + GR IH + V+ V L+ MY
Sbjct: 90 LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 293 CKC-GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
KC GS+ A F +I ++ V+WNS+I Y+ G A R+F M G +P++ TF
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 352 VA-VLTAC 358
+ V TAC
Sbjct: 210 GSLVTTAC 217
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 182/436 (41%), Gaps = 56/436 (12%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYA 106
LD L L +Y G + +F+ P N W I+ +S + +AL F
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 107 RMLAQPVEPNAFTFSSVLHGCN------LQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
M+ + + N + F SVL C + R IH + K + A VS L+ Y +
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
+ SV L + + + ++ V WN +I
Sbjct: 152 -----------------CIGSVGYALCAFG---------------DIEVKNSVSWNSIIS 179
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
Y+Q G +F M + RP E T +++++ L + K+G+
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 281 --EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
++ VG+ LV + K GSL ARK+F+ + R+ V N +++G + EEA +LF +
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGL-----VSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
M M + S ++V +L++ L + KG E+ + ++ + +VN+
Sbjct: 300 MNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEF--ILSHNLASSG 451
+ G + + + M TD DSV W +++ L +N E + + + H++ G
Sbjct: 359 YAKCGSIADARRVFYFM-TDKDSVSWNSMITG--LDQNGCFIEAVERYKSMRRHDIL-PG 414
Query: 452 TYVLLSNIYA-ASGNW 466
++ L+S++ + AS W
Sbjct: 415 SFTLISSLSSCASLKW 430
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
L+ + SC +G + R+ HS + ++ +V + L++ Y + G ARK+FD +
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 311 RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK--GW 368
R+ V+W ++ GY+ +G +EAL +M G+ + FV+VL AC G V G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 369 EIFNLM 374
+I LM
Sbjct: 125 QIHGLM 130
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 317/587 (54%), Gaps = 49/587 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLF-NRTPTPNVFLWTSIIHA---HSHSDQALSF 104
G D + +N YS G L +V++F + W S+I A H +AL+
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 105 YARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
Y M+ + + + FT +SVL+ +L R H +IK +V +GL+ Y++
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 161 GGD---VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
G ++ +EKVF E+ S D+V WN
Sbjct: 288 CGGCDGMYDSEKVFQEIL---------------------------------SPDLVVWNT 314
Query: 218 MIDEYAQNG-MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGN 275
MI Y+ N + E + FR+M RPD+ + + V S+C L + + IH + +
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
H + V AL+ +Y K G+L DAR +FD + + + V++N MI GYA HG+ EAL L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
+ M G+ P+ +TFVAVL+AC H G V +G E FN MK + +EP+ EH+ CM++LLG
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
RAG+LEE + M P SV W LL ACR HKN++L E A ++ ++ YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLM 515
L+N+YA + W A VR M+G + K+PGCS IEV + H F+A D HP +++
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614
Query: 516 LEEMNCRLKANGYTPKTDLVL---HDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
LEEM ++K GY + + GE +E+ L HSEKLA+AFGL+STR G + +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
VKNLR+C DCH+ +K MS + GR+II RD RFH F++G CSCGDYW
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 26/357 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSV 123
YS G L ++ F T PNVF + I+ A++ D + ++ + +P+ +++++
Sbjct: 53 YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA-KDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 124 LHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV------FSAEKVFDE 173
+ G AA + + K + +GL+ A D+ FS FD
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDS 171
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLL 233
S + A +T Y+K G LREA +F GM+ + RD V WN MI Y Q+ + L
Sbjct: 172 YSSVN----NAFVTYYSKGGLLREAVSVFYGMD-ELRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNHKNGVEVRVGTALVD 290
L+++M+ + + D TL +VL++ L L GR H + G H+N VG+ L+D
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS---HVGSGLID 283
Query: 291 MYCKCGSLD---DARKIFDNIVDRDVVAWNSMIMGYAIH-GYSEEALRLFDEMCGMGVKP 346
Y KCG D D+ K+F I+ D+V WN+MI GY+++ SEEA++ F +M +G +P
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
D +FV V +AC + S+ +I L + +I +++L ++G L++
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 18/318 (5%)
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
+L +++H +K VAS+ Y+S V Y++ G + A F E ++ S ++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
YAK ++ AR LF+ E D V +N +I YA ++LF++M D
Sbjct: 83 AYAKDSKIHIARQLFD--EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDG 140
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
TL ++++C ++ + +H + + V A V Y K G L +A +F
Sbjct: 141 FTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 308 IVD-RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
+ + RD V+WNSMI+ Y H +AL L+ EM G K T +VL A +
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 367 GWEIF-NLMKNGYGMEPKIEHFGC-MVNLLGRAGRLEEGYDLVRGMKT--DPDSVLWGTL 422
G + L+K G+ H G +++ + G + YD + + PD V+W T+
Sbjct: 259 GRQFHGKLIKAGFHQN---SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 423 LWACRLHKNVSLGEEIAE 440
+ S+ EE++E
Sbjct: 316 I------SGYSMNEELSE 327
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 303/568 (53%), Gaps = 41/568 (7%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPN 116
L Y G L ++ +F+ P + W ++I +++ LS + M P+
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
+T SV G ++ + IH + IK+ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL---------------------------- 122
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
E LV +++ Y ++G+L++ ++ M R++V WN +I AQNG P L
Sbjct: 123 ---ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV--RNLVAWNTLIMGNAQNGCPETVL 177
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
L++ M RP++IT + VLSSC L G+ IH+ V V ++L+ MY
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVTF 351
KCG L DA K F D D V W+SMI Y HG +EA+ LF+ M ++ ++V F
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
+ +L AC HSGL KG E+F++M YG +P ++H+ C+V+LLGRAG L++ ++R M
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP 357
Query: 412 TDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAK 471
D V+W TLL AC +HKN + + + + IL + S YVLL+N++A++ W ++
Sbjct: 358 IKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSE 417
Query: 472 VRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPK 531
VR M+ V+KE G S E +H+F GD KS++IY L+E+ +K GY P
Sbjct: 418 VRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPD 477
Query: 532 TDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSK 591
T VLHD+ EE+KE L HSEKLA+AF L+ G I+I+KNLRVC DCH K +S
Sbjct: 478 TASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISV 537
Query: 592 ITGRKIITRDRNRFHHFENGSCSCGDYW 619
I R+I RD +RFHHF NG CSCGDYW
Sbjct: 538 IKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
Y++ GD SA V+ M +++ +S ++ Y + G L AR +F+ E R + WN
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFD--EMPDRKLTTWNA 61
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
MI Q E L LFR+M PDE TL +V S L ++ G+ IH Y +
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 121
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
+++ V ++L MY + G L D + ++ R++VAWN++IMG A +G E L L+
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
M G +P+ +TFV VL++C + +G +I + G + ++++ +
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
G L + + D D V+W +++ A H
Sbjct: 241 GCLGDAAKAF-SEREDEDEVMWSSMISAYGFH 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 125/311 (40%), Gaps = 43/311 (13%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
+ GL+ ++N L Y G L + P N+ W ++I ++ + + L
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARA----IHCHVIKFAVASAPYVSTGLVGAYA 159
Y M PN TF +VL C+ A R IH IK +S V + L+ Y+
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + A K F E + V ++M++ Y HG+ EA LF M +
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT---------- 288
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKN 278
+ +E+ L +L +C G + G V +
Sbjct: 289 ----------------------NMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
++ T +VD+ + G LD A I ++ + D+V W +++ IH +E A R+F
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 338 EMCGMGVKPSD 348
E+ + + P+D
Sbjct: 387 EI--LQIDPND 395
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 314/573 (54%), Gaps = 57/573 (9%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPV------EP 115
S G L +V +F P P W +II SH A S+Y ML Q
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 116 NAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+A T S L C A +HC + + RG
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINR------------------RG---------- 139
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
+S SL+ T +L Y+K+G L A LF+ M RDV WN +I +E
Sbjct: 140 --LSADSLL-CTTLLDAYSKNGDLISAYKLFDEMPV--RDVASWNALIAGLVSGNRASEA 194
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI-HSYVGNHKNGVEVRVGTALVD 290
+ L+++M E +R E+T++A L +C LG ++ G I H Y ++ V V A +D
Sbjct: 195 MELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAID 249
Query: 291 MYCKCGSLDDARKIFDNIV-DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
MY KCG +D A ++F+ + VV WN+MI G+A+HG + AL +FD++ G+KP DV
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
+++A LTAC H+GLV G +FN M G+E ++H+GC+V+LL RAGRL E +D++
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICS 368
Query: 410 MKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGA 469
M PD VLW +LL A ++ +V + E + I + + G +VLLSN+YAA G W
Sbjct: 369 MSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDV 428
Query: 470 AKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYT 529
+VR M+ V+K PG S IE IHEF D H + ++IY ++E+ +++ +GY
Sbjct: 429 GRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYV 488
Query: 530 PKTDLVLHDIGEEQKELSLEVHSEKLALAFGLI---STRPGTTIKIVKNLRVCLDCHSVM 586
+T LVLHDIGEE+KE +L HSEKLA+A+GL+ + ++++ NLR+C DCH V
Sbjct: 489 AQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVF 548
Query: 587 KMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
K +SKI R+II RDR RFH F++GSCSC D+W
Sbjct: 549 KHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 37/310 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALS 103
RRGL +L L +YS G L + LF+ P +V W ++I + + + +A+
Sbjct: 137 RRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAME 196
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
Y RM + + + T + L C+ H+ GD
Sbjct: 197 LYKRMETEGIRRSEVTVVAALGACS---------HL----------------------GD 225
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
V E +F S +++ A + Y+K G + +A +FE + VV WN MI +A
Sbjct: 226 VKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTG-KKSVVTWNTMITGFA 284
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
+G + L +F K+ ++PD+++ LA L++C G +E G + + + ++
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMK 344
Query: 284 VGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
+VD+ + G L +A I ++ + D V W S++ I+ E A E+ M
Sbjct: 345 HYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEM 404
Query: 343 GVKPSDVTFV 352
GV +D FV
Sbjct: 405 GVN-NDGDFV 413
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 320/622 (51%), Gaps = 80/622 (12%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARML-AQPVEPNAFTFSSVLHGCN--- 128
LF+ P NV W +++ + +S + L + M + PN F + V C+
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 129 -LQAARAIHCHVIKFAVASAPYVSTGLV-------------------------------- 155
++ + H +K+ + S +V LV
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 156 -----GAYARGGDVF----------------SAEKVFDEMSERSLV-------------- 180
GA+ G DV S+ ++F + + +L
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 181 ---SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
+ A++ Y K G++ A+ +F+ A +++ ++D Y Q+ E L LF K
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHA--QNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
M ++V P+E T +L+S +L L+ G +H V V VG ALV+MY K GS
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
++DARK F + RD+V WN+MI G + HG EAL FD M G P+ +TF+ VL A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H G V +G FN + + ++P I+H+ C+V LL +AG ++ D +R + D V
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
W TLL AC + +N LG+++AE+ + SG YVLLSNI+A S W G AKVRSLM
Sbjct: 509 AWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMN 568
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
GV+KEPG S I + N+ H F+A D +HP+ IY ++E+ ++K GY+P H
Sbjct: 569 NRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFH 628
Query: 538 DIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKI 597
D+ EEQ+E +L HSEKLA+A+GLI T + + + KN+R+C DCHS +K++SKI+ R I
Sbjct: 629 DVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYI 688
Query: 598 ITRDRNRFHHFENGSCSCGDYW 619
+ RD NRFHHF +G CSC DYW
Sbjct: 689 VIRDSNRFHHFLDGQCSCCDYW 710
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 56/341 (16%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G + ++ +F+ T N+FL T+I+ A+ ++AL+ +++M + V PN +TF
Sbjct: 282 YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTF 341
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+ +L+ L+ +H V+K + V LV YA+ G + A K F M+
Sbjct: 342 AILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF 401
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
R +V+ M++ + HG REA +EA F
Sbjct: 402 RDIVTWNTMISGCSHHGLGREA------LEA---------------------------FD 428
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+M+ P+ IT + VL +C +G +E G + + + +++ T +V + K
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 296 GSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK--PSDVTFV 352
G DA ++ DVVAW +++ Y RL ++ ++ P+D + V
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVAWRTLLNA----CYVRRNYRLGKKVAEYAIEKYPND-SGV 543
Query: 353 AVLTACGHSGLVSKGWE----IFNLMKN-GYGMEPKIEHFG 388
VL + H+ S+ WE + +LM N G EP + G
Sbjct: 544 YVLLSNIHAK--SREWEGVAKVRSLMNNRGVKKEPGVSWIG 582
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
Query: 157 AYARGGDVFSAEKVFDEMSERS--LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
+Y R G+ A + S R+ + +++ Y K AR LF+ M R+VV
Sbjct: 45 SYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP--ERNVVS 102
Query: 215 WNVMIDEYAQNGMPNECLLLFRKML-AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
W M+ Y +G E L LF+ M + + RP+E V SC G +E G+ H
Sbjct: 103 WCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCF 162
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+ V LV MY C +A ++ D++ D+ ++S + GY G +E L
Sbjct: 163 LKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGL 222
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
+ + +++T+++ L + ++ ++ + M +G ++E G ++N+
Sbjct: 223 DVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINM 281
Query: 394 LGRAGRL 400
G+ G++
Sbjct: 282 YGKCGKV 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 253 VLSSCGQLGALESGRWIHSY--VGNHKNGVEVRVG-TALVDMYCKCGSLDDARKIFDNIV 309
+L C L G IH++ V N + E +L+++Y KC ARK+FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKG 367
+R+VV+W +M+ GY G+ E L+LF M G +P++ V +C +SG + +G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 309/564 (54%), Gaps = 43/564 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALSFYARMLAQPVEPNAFTF 120
Y G + ++ LF + P NV WT++I + S +AL + ML ++ + F
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+ V+ C +H +IK YVS L+
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI--------------------- 267
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
T YA R+ ++R +F+ E V W ++ Y+ N + L +F
Sbjct: 268 ----------TFYANCKRIGDSRKVFD--EKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
ML + P++ T + L+SC LG L+ G+ +H + VG +LV MY G
Sbjct: 316 GMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG 375
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+++DA +F I + +V+WNS+I+G A HG + A +F +M + +P ++TF +L+
Sbjct: 376 NVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Query: 357 ACGHSGLVSKGWEIFNLMKNGYG-MEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC H G + KG ++F M +G ++ KI+H+ CMV++LGR G+L+E +L+ M P+
Sbjct: 436 ACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPN 495
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
++W LL ACR+H +V GE+ A I + + SS YVLLSNIYA++G W +K+R
Sbjct: 496 EMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVK 555
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLV 535
MK +G+ K+PG S + + + HEF +GD P IY LE + +LK GY P
Sbjct: 556 MKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSA 613
Query: 536 LHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGR 595
LHD+ +EQKE L HSE+LA+AFGLI+T G+ + ++KNLRVC DCH+V+K++S + GR
Sbjct: 614 LHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGR 673
Query: 596 KIITRDRNRFHHFENGSCSCGDYW 619
+I+ RD RFHHF+NG+CSCGDYW
Sbjct: 674 EIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 171/362 (47%), Gaps = 21/362 (5%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGC----N 128
+FN+ P+P+V L+T +I ++ S++ AL+ + M PV + +++S++ GC +
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM---PVR-DVVSWNSMISGCVECGD 112
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
+ A + + + +V S T +V R G V AE++F +M + + +M+
Sbjct: 113 MNTAVKLFDEMPERSVVSW----TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHG 168
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
Y + G++ +A LF+ M ++V+ W MI QN E L LF+ ML ++
Sbjct: 169 YLQFGKVDDALKLFKQMPG--KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR 226
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
V+++C A G +H + E V +L+ Y C + D+RK+FD
Sbjct: 227 PFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEK 286
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
V V W +++ GY+++ E+AL +F M + P+ TF + L +C G + G
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL-WGTLLWACR 427
E+ + G+E +V + +G + + + +K S++ W +++ C
Sbjct: 347 EMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSWNSIIVGCA 403
Query: 428 LH 429
H
Sbjct: 404 QH 405
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 24/327 (7%)
Query: 105 YARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
++R + Q AF+ S V+HG C+ F+V L+ + +
Sbjct: 2 WSRAIFQRFRFRAFSISHVIHG---------KCYR-SFSVTVEFQNREVLICNHLLSRRI 51
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
A +VF+++ + T M+T Y + RL +A LF+ M RDVV WN MI +
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV--RDVVSWNSMISGCVE 109
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
G N + LF +M V ++ A+++ C + G ++ + + +
Sbjct: 110 CGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVK----DTAA 161
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
++V Y + G +DDA K+F + ++V++W +MI G + S EAL LF M +
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCI 221
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
K + F V+TAC ++ G ++ L +K G+ E + ++ R+ +
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVS--ASLITFYANCKRIGDS 279
Query: 404 YDLVRGMKTDPDSVLWGTLLWACRLHK 430
V K +W LL L+K
Sbjct: 280 RK-VFDEKVHEQVAVWTALLSGYSLNK 305
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 309/587 (52%), Gaps = 57/587 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
GL + I+ L Y +G + S + + P +V W ++I ++ D+AL+ +
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNL-----QAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
M + V N T SVL C L + + +H +++ S +V L+
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI----- 506
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
T YAK G L ++ LF G+ D+R+++ WN M+
Sbjct: 507 --------------------------TMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLA 538
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
A +G E L L KM + V D+ + LS+ +L LE G+ +H G+
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH--------GL 590
Query: 281 EVRVG--------TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
V++G A DMY KCG + + K+ V+R + +WN +I HGY EE
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
F EM MG+KP VTFV++LTAC H GLV KG ++++ +G+EP IEH C+++
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
LLGR+GRL E + M P+ ++W +LL +C++H N+ G + AE +
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YVL SN++A +G W VR M ++K+ CS +++ +++ F GD HP++ +I
Sbjct: 771 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 830
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
Y LE++ +K +GY T L D EEQKE +L HSE+LALA+ L+ST G+T++I
Sbjct: 831 YAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRI 890
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
KNLR+C DCHSV K +S++ GR+I+ RD+ RFHHFE G CSC DYW
Sbjct: 891 FKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 74/421 (17%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALS 103
+ G D + L R Y+ G + +F + PT ++ W S++ + S AL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
M++ N TF+S L C + R +H V+ + + LV Y
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ + +V +M R +V+ WN +I
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVA---------------------------------WNALI 435
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG-ALESGRWIHSYVGNHKN 278
YA++ P++ L F+ M E V + IT+++VLS+C G LE G+ +H+Y+ +
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ V +L+ MY KCG L ++ +F+ + +R+++ WN+M+ A HG+ EE L+L +
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWE---------------IFNLMKNGYG---- 379
M GV +F L+A ++ +G + IFN + Y
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 615
Query: 380 -------MEPKIEH----FGCMVNLLGRAGRLEE---GYDLVRGMKTDPDSVLWGTLLWA 425
+ P + + +++ LGR G EE + + M P V + +LL A
Sbjct: 616 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 675
Query: 426 C 426
C
Sbjct: 676 C 676
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 176/407 (43%), Gaps = 52/407 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALS 103
+ GL+ + L S+G++ ++ +F++ + W SI A++ H +++
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 104 FYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++ M E N+ T S++L H + + R IH V+K S V L+ YA
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
G A VF +M + L+S WN ++
Sbjct: 308 GAGRSVEANLVFKQMPTKDLIS---------------------------------WNSLM 334
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNH 276
+ +G + L L M++ + +T + L++C E GR +H V G
Sbjct: 335 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 394
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
N + +G ALV MY K G + ++R++ + RDVVAWN++I GYA ++AL F
Sbjct: 395 YNQI---IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSG-LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
M GV + +T V+VL+AC G L+ +G + + + G E ++ +
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYA 510
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
+ G L DL G+ + + + W +L A H + GEE+ + +
Sbjct: 511 KCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---GEEVLKLV 553
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 165/375 (44%), Gaps = 57/375 (15%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y+ G + + LF+ P N W +++ + + F+ +M ++P++F
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 121 SSVLHGCN-----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+S++ C + +H V K + S YVST
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST----------------------- 98
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
A+L Y +G + +R +FE E R+VV W ++ Y+ G P E + ++
Sbjct: 99 --------AILHLYGVYGLVSCSRKVFE--EMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 148
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDMYC 293
+ M E V +E ++ V+SSCG L GR I V K+G+E + V +L+ M
Sbjct: 149 KGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV--VKSGLESKLAVENSLISMLG 206
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
G++D A IFD + +RD ++WNS+ YA +G+ EE+ R+F M + + T
Sbjct: 207 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVST 266
Query: 354 VLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGR----AGRLEEGYDLVR 408
+L+ GH G I L +K G+ + C+ N L R AGR E + +
Sbjct: 267 LLSVLGHVDHQKWGRGIHGLVVKMGF------DSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 409 GMKTDPDSVLWGTLL 423
M T D + W +L+
Sbjct: 321 QMPT-KDLISWNSLM 334
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 145/368 (39%), Gaps = 44/368 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
Y G + S +F P NV WTS++ +S ++ + Y M + V N +
Sbjct: 104 YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM 163
Query: 121 SSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S V+ C L R I V+K + S V L+ G+V A +FD+MSE
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
R D + WN + YAQNG E +F
Sbjct: 224 R---------------------------------DTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M + T+ +LS G + + GR IH V V V L+ MY G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+A +F + +D+++WNS++ + G S +AL L M G + VTF + L
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 370
Query: 357 ACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC KG + L + +G I + +V++ G+ G + E ++ M D
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGN--ALVSMYGKIGEMSESRRVLLQMPR-RD 427
Query: 416 SVLWGTLL 423
V W L+
Sbjct: 428 VVAWNALI 435
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
MY K G + AR +FD + R+ V+WN+M+ G G E + F +MC +G+KPS
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 351 FVAVLTACGHSG 362
+++TACG SG
Sbjct: 61 IASLVTACGRSG 72
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/563 (35%), Positives = 306/563 (54%), Gaps = 40/563 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTF 120
Y+ +G L + + R +V WT++I ++ D+AL+ + +ML + + +
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++ + C L+ + IH A S FS++ F
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQ----ACVSG-----------------FSSDLPFQ---- 629
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
A++T Y++ G++ E+ L FE EA D + WN ++ + Q+G E L +F
Sbjct: 630 ------NALVTLYSRCGKIEESYLAFEQTEAG--DNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M E + + T + + + + ++ G+ +H+ + E V AL+ MY KCG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
S+ DA K F + ++ V+WN++I Y+ HG+ EAL FD+M V+P+ VT V VL+
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC H GLV KG F M + YG+ PK EH+ C+V++L RAG L + ++ M PD+
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
++W TLL AC +HKN+ +GE A +L S TYVLLSN+YA S W R M
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVL 536
K GV+KEPG S IEV N IH F GD HP + +I+ +++ R GY +L
Sbjct: 922 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 981
Query: 537 HDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRK 596
+++ EQK+ + +HSEKLA++FGL+S I ++KNLRVC DCH+ +K +SK++ R+
Sbjct: 982 NELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNRE 1041
Query: 597 IITRDRNRFHHFENGSCSCGDYW 619
II RD RFHHFE G+CSC DYW
Sbjct: 1042 IIVRDAYRFHHFEGGACSCKDYW 1064
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 167/388 (43%), Gaps = 45/388 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ GLD + L+ KL Y G L+ + +F+ P +F W +I + + +
Sbjct: 113 KLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG 172
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN-----LQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ RM+++ V PN TFS VL C IH ++ + + V L+ Y
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+R G V A +VFD + RL +D W M
Sbjct: 233 SRNGFVDLARRVFDGL-------------------RL--------------KDHSSWVAM 259
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I ++N E + LF M + P +VLS+C ++ +LE G +H V
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ V ALV +Y G+L A IF N+ RD V +N++I G + GY E+A+ LF
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRA 397
M G++P T +++ AC G + +G ++ K G+ KIE G ++NL +
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKC 437
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWA 425
+E D + + + VLW +L A
Sbjct: 438 ADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 42/367 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
Y +G+L + +F+ + + ++I+ S + ++A+ + RM +EP++ T
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+S++ C+ L + +H + K AS + L+ YA+ D+ +A F
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF----- 447
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+E + +VV WNVM+ Y +FR
Sbjct: 448 ----------------------------LETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M E++ P++ T ++L +C +LG LE G IHS + + V + L+DMY K G
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
LD A I +DVV+W +MI GY + + ++AL F +M G++ +V ++
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC + +G +I + G + +V L R G++EE Y L D+
Sbjct: 600 ACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDN 657
Query: 417 VLWGTLL 423
+ W L+
Sbjct: 658 IAWNALV 664
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 165/374 (44%), Gaps = 44/374 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y+ + ++ F T NV LW ++ A+ D + + +M + + PN +T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+L C +L+ IH +IK YV + L+ YA+ G + +A + +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ +VS W MI Y Q ++ L FR
Sbjct: 554 KDVVS---------------------------------WTTMIAGYTQYNFDDKALTTFR 580
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+ML +R DE+ L +S+C L AL+ G+ IH+ ++ ALV +Y +CG
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
++++ F+ D +AWN+++ G+ G +EEALR+F M G+ ++ TF + +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 357 ACGHSGLVSKGWEIFNLM-KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
A + + +G ++ ++ K GY E ++ ++++ + G + + + T +
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEV--CNALISMYAKCGSISDAEKQFLEVST-KN 757
Query: 416 SVLWGTLLWACRLH 429
V W ++ A H
Sbjct: 758 EVSWNAIINAYSKH 771
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 169/384 (44%), Gaps = 44/384 (11%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSF 104
+GL ++ L YS G + + +F+ + W ++I S ++ +A+
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 105 YARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
+ M + P + FSSVL C +L+ +H V+K +S YV LV Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
G++ SAE +F MS+ RD V +N +I+
Sbjct: 336 LGNLISAEHIFSNMSQ---------------------------------RDAVTYNTLIN 362
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
+Q G + + LF++M + + PD TL +++ +C G L G+ +H+Y
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
++ AL+++Y KC ++ A F +VV WN M++ Y + + R+F +M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGR 399
+ P+ T+ ++L C G + G +I + ++K + + + ++++ + G+
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGK 540
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLL 423
L+ +D++ D V W T++
Sbjct: 541 LDTAWDILIRF-AGKDVVSWTTMI 563
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 44/274 (16%)
Query: 243 VRPDEITLLAVLSSCGQL-GALESGRWIHSYV---GNHKNGVEVRVGTALVDMYCKCGSL 298
+RP+ TL +L C + G+L+ GR +HS + G NG + L D Y G L
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC---LSEKLFDFYLFKGDL 136
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
A K+FD + +R + WN MI A E LF M V P++ TF VL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG------RLEEGYDL------ 406
+ E + G+ +++L R G R+ +G L
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 407 ---VRGMKTD-------------------PDSVLWGTLLWACRLHKNVSLGEEIAEFILS 444
+ G+ + P + ++L AC+ +++ +GE++ +L
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 445 HNLASSGTYV--LLSNIYAASGNWVGAAKVRSLM 476
SS TYV L ++Y GN + A + S M
Sbjct: 317 LGF-SSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 317/578 (54%), Gaps = 44/578 (7%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVF---LWTSIIHAHSHSD---QALSFYA 106
+P L KL +S L + +F+ ++ +W ++ +S + AL Y
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 107 RMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
ML +EP F+ S L C +L+ R IH ++K
Sbjct: 226 DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVK--------------------- 264
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
EKV V +L Y + G +AR +F+GM R+VV WN +I
Sbjct: 265 ---RKEKV-------DQVVYNVLLKLYMESGLFDDARKVFDGMS--ERNVVTWNSLISVL 312
Query: 223 AQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
++ +E LFRKM E + TL +L +C ++ AL +G+ IH+ + K +V
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
+ +L+DMY KCG ++ +R++FD ++ +D+ +WN M+ YAI+G EE + LF+ M
Sbjct: 373 PLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
GV P +TFVA+L+ C +GL G +F MK + + P +EH+ C+V++LGRAG+++E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
++ M P + +WG+LL +CRLH NVS+GE A+ + + G YV++SNIYA
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML-EEMNC 521
+ W K+R +MK GV+KE GCS ++V ++I F+AG ++ D Y + E+
Sbjct: 553 AKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE 612
Query: 522 RLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLD 581
++ +GY+P T +VLHD+ EE K + HSE+LA + LI T G I+I KNLRVC D
Sbjct: 613 AIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 672
Query: 582 CHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
CHS MK++S++T R I+ RD RFHHF +G CSC DYW
Sbjct: 673 CHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/580 (35%), Positives = 307/580 (52%), Gaps = 47/580 (8%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYA 106
LDP + L + Y+ +G + + +FN P +V W+ +I + ++A+ +
Sbjct: 280 LDPR--VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 107 RMLAQPVEPNAFTFSSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
RM V PN FT SS+L+GC + +H V+K YVS L+ YA+
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
+ +A K+F E+S S++ V WN +I Y
Sbjct: 398 KMDTAVKLFAELS---------------------------------SKNEVSWNTVIVGY 424
Query: 223 AQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
G + +FR+ L +V E+T + L +C L +++ G +H N +V
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
V +L+DMY KCG + A+ +F+ + DV +WN++I GY+ HG +ALR+ D M
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
KP+ +TF+ VL+ C ++GL+ +G E F M +G+EP +EH+ CMV LLGR+G+L++
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
L+ G+ +P ++W +L A N AE IL N TYVL+SN+YA
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAG 664
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCR 522
+ W A +R MK GV+KEPG S IE +H F G HP + I MLE +N +
Sbjct: 665 AKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMK 724
Query: 523 LKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLI---STRPGTTIKIVKNLRVC 579
GY P + VL D+ +E+K+ L VHSE+LALA+GL+ S+R I I+KNLR+C
Sbjct: 725 ATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSR--NRILIMKNLRIC 782
Query: 580 LDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
DCHS MK++S I R ++ RD NRFHHF G CSCGD+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 156/365 (42%), Gaps = 34/365 (9%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFT 119
L +Y G ++ LF+ P N + ++ ++ D + Y+R+ + E N
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD-PIGLYSRLHREGHELNPHV 148
Query: 120 FSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
F+S L + +A C + + Y S VGA
Sbjct: 149 FTSFLK-LFVSLDKAEICPWLHSPIVKLGYDSNAFVGA---------------------- 185
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
A++ Y+ G + AR +FEG+ +D+V W ++ Y +NG + L L M
Sbjct: 186 ----ALINAYSVCGSVDSARTVFEGILC--KDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
P+ T L + LGA + + +H + ++ RVG L+ +Y + G +
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
DA K+F+ + DVV W+ MI + +G+ EA+ LF M V P++ T ++L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 360 HSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
G ++ L +K G+ ++ + + ++++ + +++ L + + + V
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAELSS-KNEVS 416
Query: 419 WGTLL 423
W T++
Sbjct: 417 WNTVI 421
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 307/596 (51%), Gaps = 84/596 (14%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTG-- 153
+++S Y ML P+AF+F +L C + + +HCHV K + P+V T
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 154 -------------------------------LVGAYARGGDVFSAEKVFDEMSER--SLV 180
L+ Y V A +F M E S+
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 181 SVT-------------------------------------AMLTCYAKHGRLREARLLFE 203
SVT + +T Y K G + R LF+
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 204 GMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL 263
M + ++ WN +I Y+QNG+ + L L+ +M + V PD TL++VLSSC LGA
Sbjct: 216 EMPV--KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 264 ESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGY 323
+ G + V ++ V V A + MY +CG+L AR +FD + + +V+W +MI Y
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPK 383
+HG E L LFD+M G++P FV VL+AC HSGL KG E+F MK Y +EP
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPG 393
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFIL 443
EH+ C+V+LLGRAGRL+E + + M +PD +WG LL AC++HKNV + E ++
Sbjct: 394 PEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI 453
Query: 444 SHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGD 503
+ G YVL+SNIY+ S N G ++R +M+ K+PG S +E R+H F+AGD
Sbjct: 454 EFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGD 513
Query: 504 LRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLIS 563
H ++++++ ML+E+ + D GEE + E HSE+LA+AFG+++
Sbjct: 514 RSHEQTEEVHRMLDELETSVMELAGNMDCDR-----GEEVSSTTRE-HSERLAIAFGILN 567
Query: 564 TRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+ PGT I ++KNLRVC DCH +K +SKI R+ + RD +RFH+F++G CSC DYW
Sbjct: 568 SIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 51/340 (15%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQA---LSFY 105
GLD + Y G + LF+ P + W ++I +S + A L Y
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASA----PYVSTGLVGAYARG 161
+M + V P+ FT SVL C A+ I V K ++ +VS + YAR
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G++ A VFD M +SLVS TAM+ CY H
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMH----------------------------- 336
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
GM L+LF M+ +RPD + VLS+C G + G + + K +
Sbjct: 337 ----GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM---KREYK 389
Query: 282 VRVG----TALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLF 336
+ G + LVD+ + G LD+A + +++ V+ D W +++ IH + A F
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKG-WEIFNLMK 375
++ + +P+++ + +++ +G W I +M+
Sbjct: 450 AKV--IEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 44/302 (14%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
WNV + E A + +E + L+R ML PD + +L SC L SG+ +H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD--VVAWNSMIMGYAIHGYSEEA 332
E V TAL+ MYCKCG + DARK+F+ V +N++I GY + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
+F M GV VT + ++ C + G + G G++ ++ +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNSFIT 199
Query: 393 LLGRAGRLEEG----------------------------YD---LVRGMKTD---PDSVL 418
+ + G +E G YD L MK+ PD
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 419 WGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSN----IYAASGNWVGAAKVRS 474
++L +C +G E+ + + S+ + V +SN +YA GN A V
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN---VFVSNASISMYARCGNLAKARAVFD 316
Query: 475 LM 476
+M
Sbjct: 317 IM 318
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 298/576 (51%), Gaps = 41/576 (7%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYAR 107
D + ++ L + G + ++ LF R + W ++I + + +A+ +
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 108 MLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
M Q ++ + + F SVL C + + IH +I+ YV + L+ Y +
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+ A+ VFD M ++ +VV W M+ Y
Sbjct: 321 LHYAKTVFDRMKQK---------------------------------NVVSWTAMVVGYG 347
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
Q G E + +F M + PD TL +S+C + +LE G H V
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
V +LV +Y KCG +DD+ ++F+ + RD V+W +M+ YA G + E ++LFD+M G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
+KP VT V++AC +GLV KG F LM + YG+ P I H+ CM++L R+GRLEE
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 404 YDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAAS 463
+ GM PD++ W TLL ACR N+ +G+ AE ++ + Y LLS+IYA+
Sbjct: 528 MRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASK 587
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRL 523
G W A++R M+ V+KEPG S I+ ++H F A D P IY LEE+N ++
Sbjct: 588 GKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Query: 524 KANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCH 583
NGY P T V HD+ E K L HSE+LA+AFGLI G I++ KNLRVC+DCH
Sbjct: 648 IDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCH 707
Query: 584 SVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+ K +S +TGR+I+ RD RFH F++G+CSCGD+W
Sbjct: 708 NATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 202/432 (46%), Gaps = 27/432 (6%)
Query: 47 RRGLDPHPILNF----KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD--- 99
RR D P N L +YS G + + F + P + W +I +S S
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVG 120
Query: 100 QALSFYARMLAQ-PVEPNAFTFSSVLH----GCNLQAARAIHCHVIKFAVASAPYVSTGL 154
A+ Y M+ T ++L ++ + IH VIK S V + L
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
+ YA G + A+KVF + +R+ V +++ G + +A LF GME DS V
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS---VS 237
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
W MI AQNG+ E + FR+M + ++ D+ +VL +CG LGA+ G+ IH+ +
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
+ VG+AL+DMYCKC L A+ +FD + ++VV+W +M++GY G +EEA++
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHF----GCM 390
+F +M G+ P T ++AC + + +G + +G + + H+ +
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSL 412
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASS 450
V L G+ G +++ L M D+V W ++ A ++ + ++ H L
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Query: 451 GTYVLLSNIYAA 462
G V L+ + +A
Sbjct: 472 G--VTLTGVISA 481
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 165/398 (41%), Gaps = 85/398 (21%)
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
+ IH ++I+ ++ +V AYA A +VFD + + +L S +L Y+K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLL 251
G + E FE + RD V WNV+I+ Y+ +G+ + + M+ + +TL+
Sbjct: 86 GLISEMESTFEKLP--DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
+L G + G+ IH V + VG+ L+ MY G + DA+K+F + DR
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 312 ------------------------------DVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
D V+W +MI G A +G ++EA+ F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEI------------------------------- 370
G+K F +VL ACG G +++G +I
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 371 ----FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---TDPDSVLWGTLL 423
F+ MK + + + MV G+ GR EE + M+ DPD G +
Sbjct: 324 AKTVFDRMK-----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 424 WACRLHKNVSLGEEIAEFILSHNLA-SSGT--YVLLSN 458
AC NVS EE ++F H A +SG YV +SN
Sbjct: 379 SAC---ANVSSLEEGSQF---HGKAITSGLIHYVTVSN 410
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 293/477 (61%), Gaps = 10/477 (2%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ------ALSFYARMLAQP 112
K + S+ GHL ++ ++F P PN +L ++I A S D+ A++ Y ++ A
Sbjct: 52 KFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALC 111
Query: 113 VEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
+P+ FTF VL ++ R IH V+ F S+ +V TGL+ Y G + A
Sbjct: 112 AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDAR 171
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
K+FDEM + + A+L Y K G + EAR L E M R+ V W +I YA++G
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRA 231
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
+E + +F++ML E V PDE+TLLAVLS+C LG+LE G I SYV + V + A+
Sbjct: 232 SEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+DMY K G++ A +F+ + +R+VV W ++I G A HG+ EAL +F+ M GV+P+D
Sbjct: 292 IDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
VTF+A+L+AC H G V G +FN M++ YG+ P IEH+GCM++LLGRAG+L E ++++
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 409 GMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVG 468
M ++ +WG+LL A +H ++ LGE ++ +SG Y+LL+N+Y+ G W
Sbjct: 412 SMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDE 471
Query: 469 AAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKA 525
+ +R++MKG GV+K G S IEV NR+++FI+GDL HP+ + I+ +L+EM+ ++++
Sbjct: 472 SRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 312/571 (54%), Gaps = 41/571 (7%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLA-QPVEPNAF 118
SY + ++ + LF+ PNV WTS+I ++ ALS + +M +PV PN +
Sbjct: 73 SYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEY 132
Query: 119 TFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
TF+SV C+ A I ++ A +GL R+
Sbjct: 133 TFASVFKACSALAESRIGKNI------HARLEISGL---------------------RRN 165
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
+V ++++ Y K + AR +F+ M R+VV W MI YAQN +E + LFR
Sbjct: 166 IVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF 225
Query: 239 LAEKV--RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
A R ++ L +V+S+C LG L+ G+ H V V T+L+DMY KCG
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
SL A KIF I V+++ SMIM A HG E A++LFDEM + P+ VT + VL
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD- 415
AC HSGLV++G E +LM YG+ P H+ C+V++LGR GR++E Y+L + ++ +
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 416 -SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
++LWG LL A RLH V + E ++ ++ N + Y+ LSN YA SG W + +R
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGY------ 528
MK SG KE CS IE + ++ F AGDL +S +I L+++ R+K G+
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSM 525
Query: 529 TPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKM 588
+ V D+ EE K+ + +H E+LALA+GL+ G+TI+I+ NLR+C DCH K+
Sbjct: 526 ITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKL 585
Query: 589 MSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+S+I R+I+ RD NRFH F+NGSC+C DYW
Sbjct: 586 ISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 39/293 (13%)
Query: 113 VEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
++ AF + N +H +K AS + LV +Y + ++ +A K+FD
Sbjct: 29 LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFD 88
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
EM E +VV W +I Y G P L
Sbjct: 89 EMCEP---------------------------------NVVSWTSVISGYNDMGKPQNAL 115
Query: 233 LLFRKMLAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
+F+KM ++ V P+E T +V +C L G+ IH+ + + V ++LVDM
Sbjct: 116 SMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDM 175
Query: 292 YCKCGSLDDARKIFDNIV--DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG--MGVKPS 347
Y KC ++ AR++FD+++ R+VV+W SMI YA + EA+ LF + +
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN 235
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
+V++AC G + G L+ G G E ++++ + G L
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRG-GYESNTVVATSLLDMYAKCGSL 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKP 346
LV Y K ++ ARK+FD + + +VV+W S+I GY G + AL +F +M V P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
++ TF +V AC G I ++ G+ I +V++ G+ +E +
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 407 VRGM-KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA----SSGTYVLLSNIYA 461
M + V W +++ A + + G E E S N A + ++L S I A
Sbjct: 189 FDSMIGYGRNVVSWTSMITA---YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 245
Query: 462 AS 463
S
Sbjct: 246 CS 247
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 303/579 (52%), Gaps = 57/579 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
GL + I+ L Y +G + S + + P +V W ++I ++ D+AL+ +
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNL-----QAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
M + V N T SVL C L + + +H +++ S +V L+
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI----- 489
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
T YAK G L ++ LF G+ D+R+++ WN M+
Sbjct: 490 --------------------------TMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLA 521
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
A +G E L L KM + V D+ + LS+ +L LE G+ +H G+
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH--------GL 573
Query: 281 EVRVG--------TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
V++G A DMY KCG + + K+ V+R + +WN +I HGY EE
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
F EM MG+KP VTFV++LTAC H GLV KG ++++ +G+EP IEH C+++
Sbjct: 634 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
LLGR+GRL E + M P+ ++W +LL +C++H N+ G + AE +
Sbjct: 694 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 753
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YVL SN++A +G W VR M ++K+ CS +++ +++ F GD HP++ +I
Sbjct: 754 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 813
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
Y LE++ +K +GY T L D EEQKE +L HSE+LALA+ L+ST G+T++I
Sbjct: 814 YAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRI 873
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENG 611
KNLR+C DCHSV K +S++ GR+I+ RD+ RFHHFE G
Sbjct: 874 FKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 74/421 (17%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALS 103
+ G D + L R Y+ G + +F + PT ++ W S++ + S AL
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
M++ N TF+S L C + R +H V+ + + LV Y
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ + +V +M R +V+ WN +I
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVA---------------------------------WNALI 418
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG-ALESGRWIHSYVGNHKN 278
YA++ P++ L F+ M E V + IT+++VLS+C G LE G+ +H+Y+ +
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ V +L+ MY KCG L ++ +F+ + +R+++ WN+M+ A HG+ EE L+L +
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWE---------------IFNLMKNGYG---- 379
M GV +F L+A ++ +G + IFN + Y
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 380 -------MEPKIEH----FGCMVNLLGRAGRLEE---GYDLVRGMKTDPDSVLWGTLLWA 425
+ P + + +++ LGR G EE + + M P V + +LL A
Sbjct: 599 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 426 C 426
C
Sbjct: 659 C 659
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 176/407 (43%), Gaps = 52/407 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALS 103
+ GL+ + L S+G++ ++ +F++ + W SI A++ H +++
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 104 FYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++ M E N+ T S++L H + + R IH V+K S V L+ YA
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
G A VF +M + L+S WN ++
Sbjct: 291 GAGRSVEANLVFKQMPTKDLIS---------------------------------WNSLM 317
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNH 276
+ +G + L L M++ + +T + L++C E GR +H V G
Sbjct: 318 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 377
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
N + +G ALV MY K G + ++R++ + RDVVAWN++I GYA ++AL F
Sbjct: 378 YNQI---IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSG-LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
M GV + +T V+VL+AC G L+ +G + + + G E ++ +
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYA 493
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
+ G L DL G+ + + + W +L A H + GEE+ + +
Sbjct: 494 KCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---GEEVLKLV 536
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 54/336 (16%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCN-----LQAARAIHCHVIKFAVASAPYVSTGL 154
+ + F+ +M ++P++F +S++ C + +H V K + S YVST
Sbjct: 24 EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST-- 81
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
A+L Y +G + +R +FE E R+VV
Sbjct: 82 -----------------------------AILHLYGVYGLVSCSRKVFE--EMPDRNVVS 110
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
W ++ Y+ G P E + +++ M E V +E ++ V+SSCG L GR I V
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV- 169
Query: 275 NHKNGVEVR--VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
K+G+E + V +L+ M G++D A IFD + +RD ++WNS+ YA +G+ EE+
Sbjct: 170 -VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMV 391
R+F M + + T +L+ GH G I L +K G+ + C+
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF------DSVVCVC 282
Query: 392 NLLGR----AGRLEEGYDLVRGMKTDPDSVLWGTLL 423
N L R AGR E + + M T D + W +L+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLM 317
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 145/368 (39%), Gaps = 44/368 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
Y G + S +F P NV WTS++ +S ++ + Y M + V N +
Sbjct: 87 YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM 146
Query: 121 SSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S V+ C L R I V+K + S V L+ G+V A +FD+MSE
Sbjct: 147 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
R D + WN + YAQNG E +F
Sbjct: 207 R---------------------------------DTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M + T+ +LS G + + GR IH V V V L+ MY G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+A +F + +D+++WNS++ + G S +AL L M G + VTF + L
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 357 ACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC KG + L + +G I + +V++ G+ G + E ++ M D
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGN--ALVSMYGKIGEMSESRRVLLQMPR-RD 410
Query: 416 SVLWGTLL 423
V W L+
Sbjct: 411 VVAWNALI 418
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 116/214 (54%), Gaps = 3/214 (1%)
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL-ESGRW 268
R+ V WN M+ + G+ E + FRKM ++P + +++++CG+ G++ G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+H +V +V V TA++ +Y G + +RK+F+ + DR+VV+W S+++GY+ G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EE + ++ M G GV ++ + V+++CG S G +I + G+E K+
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLAVEN 182
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
++++LG G ++ + M ++ D++ W ++
Sbjct: 183 SLISMLGSMGNVDYANYIFDQM-SERDTISWNSI 215
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 351 bits (901), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 197/554 (35%), Positives = 299/554 (53%), Gaps = 44/554 (7%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSD----QALSFYARMLAQPVEPNAFTFSSVLHGCN--- 128
LF+ P N+ W + I ++S +D +A+ + PN+ TF + L+ C+
Sbjct: 165 LFDEIPERNLETWNAFI-SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 129 -LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
L +H V++ + V GL+ Y + + S+E +F EM
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG------------ 271
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
+++ V W ++ Y QN + +L+ + + V +
Sbjct: 272 ---------------------TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
+ +VLS+C + LE GR IH++ + VG+ALVDMY KCG ++D+ + FD
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC--GMGVKPSDVTFVAVLTACGHSGLVS 365
+ ++++V NS+I GYA G + AL LF+EM G G P+ +TFV++L+AC +G V
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA 425
G +IF+ M++ YG+EP EH+ C+V++LGRAG +E Y+ ++ M P +WG L A
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 426 CRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEP 485
CR+H LG AE + + SG +VLLSN +AA+G W A VR +KG G++K
Sbjct: 491 CRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA 550
Query: 486 GCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKE 545
G S I V N++H F A D H +++I L ++ ++A GY P L L+D+ EE+K
Sbjct: 551 GYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKA 610
Query: 546 LSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRF 605
+ HSEKLALAFGL+S I+I KNLR+C DCHS K +S R+II RD NRF
Sbjct: 611 AEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRF 670
Query: 606 HHFENGSCSCGDYW 619
H F++G CSC DYW
Sbjct: 671 HRFKDGICSCKDYW 684
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
++ Y+K ARL+ A R+VV W +I AQNG + L+ F +M E V
Sbjct: 48 LINMYSKLDHPESARLVLRLTPA--RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
P++ T + L +G+ IH+ ++V VG + DMYCK DDARK+
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD I +R++ WN+ I G EA+ F E + P+ +TF A L AC +
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
+ G ++ L+ G + + +++ G+ ++ + M T ++V W +L+
Sbjct: 226 NLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
Query: 425 A 425
A
Sbjct: 284 A 284
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 129/317 (40%), Gaps = 35/317 (11%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARM 108
P P L L YS + H + + TP NV WTS+I + H AL + M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 109 LAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
+ V PN FTF C +A ++ V + + L R DVF
Sbjct: 100 RREGVVPNDFTFP-----CAFKAVASLRLPVTGKQIHA-------LAVKCGRILDVFVGC 147
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLRE-ARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
FD Y K RLR+ AR LF+ E R++ WN I +G
Sbjct: 148 SAFD---------------MYCK-TRLRDDARKLFD--EIPERNLETWNAFISNSVTDGR 189
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
P E + F + P+ IT A L++C L G +H V +V V
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
L+D Y KC + + IF + ++ V+W S++ Y + E+A L+ V+ S
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 348 DVTFVAVLTAC-GHSGL 363
D +VL+AC G +GL
Sbjct: 310 DFMISSVLSACAGMAGL 326
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH--SHSDQALS- 103
R G D + L Y + S +F T N W S++ A+ +H D+ S
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
Y R VE + F SSVL C L+ R+IH H +K V +V + LV Y
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 356
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + +E+ FDEM E++LV+ +++ YA G++ A LFE M
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA------------- 403
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
P C P+ +T +++LS+C + GA+E+G I + G
Sbjct: 404 --------PRGC----------GPTPNYMTFVSLLSACSRAGAVENGMKIFDSM-RSTYG 444
Query: 280 VEVRVG--TALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEAL 333
+E + +VDM + G ++ A + + + + W ++ +HG + L
Sbjct: 445 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 313/571 (54%), Gaps = 48/571 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVE--PNAF 118
YS G ++ + +F R ++ W ++I H+ +AL + M ++ P+ F
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 119 TFSSVLHGCN----LQAARAIHCHVIK--FAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
T +S+L C+ + A + IH +++ F S+ ++ LV Y + G +FSA K FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
++ E++++S ++++ YA+ G EA LF+ ++ N ID +A
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE-------LNSQIDSFA--------- 315
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
L +++ L G+ + + +G+E V ++VDMY
Sbjct: 316 -----------------LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
KCG +D+A K F + +DV++W +I GY HG ++++R+F EM ++P +V ++
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
AVL+AC HSG++ +G E+F+ + +G++P++EH+ C+V+LLGRAGRL+E L+ M
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
P+ +W TLL CR+H ++ LG+E+ + +L + + YV++SN+Y +G W
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKAN-GYTPK 531
R L G++KE G S +E+ +H F +G+ HP + I L+E RL+ GY
Sbjct: 539 RELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYG 598
Query: 532 TDLVLHDIGEEQKELSLEVHSEKLALAFGLIS---TRPGTTIKIVKNLRVCLDCHSVMKM 588
LHDI +E KE +L HSEKLA+ L + + G TI++ KNLRVC+DCH +K
Sbjct: 599 LKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKG 658
Query: 589 MSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+SKIT + RD RFH FE+G CSCGDYW
Sbjct: 659 LSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 50/361 (13%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGCNL--- 129
+F+ P NV W++++ H + +LS ++ M Q + PN FTFS+ L C L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 130 -QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
+ IH +K V LV Y++ G + AEKVF + +RSL+S
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS------- 175
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV--RPD 246
WN MI + G ++ L F M + RPD
Sbjct: 176 --------------------------WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPD 209
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYV---GNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
E TL ++L +C G + +G+ IH ++ G H G+ LVD+Y KCG L ARK
Sbjct: 210 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARK 268
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGL 363
FD I ++ +++W+S+I+GYA G EA+ LF + + + +++ L
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 364 VSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
+ +G ++ L +K G+E + +V++ + G ++E M+ D + W +
Sbjct: 329 LRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVV 385
Query: 423 L 423
+
Sbjct: 386 I 386
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 43/295 (14%)
Query: 135 IHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGR 194
+HC+++K S L+ Y + + A KVFD M ER++VS
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVS------------- 74
Query: 195 LREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
W+ ++ + NG L LF +M + + P+E T L
Sbjct: 75 --------------------WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNL 114
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVV 314
+CG L ALE G IH + + V VG +LVDMY KCG +++A K+F IVDR ++
Sbjct: 115 KACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLI 174
Query: 315 AWNSMIMGYAIHGYSEEALRLFDEMCGMGVK--PSDVTFVAVLTACGHSGLVSKGWEIFN 372
+WN+MI G+ GY +AL F M +K P + T ++L AC +G++ G +I
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 373 -LMKNGYGMEPKIEHFGCMVNLLGRAGRL---EEGYDLVRGMKTDPDSVLWGTLL 423
L+++G+ G +V+L + G L + +D ++ + + W +L+
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSSLI 285
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
L+++L C + G + G +H Y+ +G+ + L+DMYCKC A K+FD++
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
+R+VV+W++++ G+ ++G + +L LF EM G+ P++ TF L ACG + KG
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+I G E +E +V++ + GR+ E + R + D + W ++
Sbjct: 128 QIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 188/523 (35%), Positives = 287/523 (54%), Gaps = 38/523 (7%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVG 156
+L F +M+A + P+ S C + + R++HC +K + +V + LV
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
YA+ G++ A R +F+ M R+VV W+
Sbjct: 160 MYAKCGEIVYA-------------------------------RKMFDEMP--QRNVVTWS 186
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
M+ YAQ G E L LF++ L E + ++ + +V+S C LE GR IH
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKS 246
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
VG++LV +Y KCG + A ++F+ + +++ WN+M+ YA H ++++ + LF
Sbjct: 247 SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELF 306
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR 396
M G+KP+ +TF+ VL AC H+GLV +G F+ MK +EP +H+ +V++LGR
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGR 365
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLL 456
AGRL+E +++ M DP +WG LL +C +HKN L A+ + SSG ++ L
Sbjct: 366 AGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISL 425
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
SN YAA G + AAK R L++ G +KE G S +E N++H F AG+ RH KS++IY L
Sbjct: 426 SNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKL 485
Query: 517 EEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNL 576
E+ ++ GY T VL ++ ++K ++ HSE+LA+AFGLI+ I+++KNL
Sbjct: 486 AELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNL 545
Query: 577 RVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
RVC DCH+ +K MS T R II RD NRFH FE+G CSC DYW
Sbjct: 546 RVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 317/605 (52%), Gaps = 48/605 (7%)
Query: 63 SYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEP 115
SY+ +G++ ++ L + P++ W S++ ++ S A++ RM ++P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 116 NAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ + SS+L +L+ +AIH ++++ + YV T L+ Y + G + A VF
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPN 229
D M +++V+ ++++ + L++A L ME + D + WN + YA G P
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSC-------------------------------- 257
+ L + KM + V P+ ++ A+ S C
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Query: 258 ---GQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVV 314
G L L SG+ +H + + V TALVDMY K G L A +IF I ++ +
Sbjct: 404 KILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA 463
Query: 315 AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM 374
+WN M+MGYA+ G EE + F M G++P +TF +VL+ C +SGLV +GW+ F+LM
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Query: 375 KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSL 434
++ YG+ P IEH CMV+LLGR+G L+E +D ++ M PD+ +WG L +C++H+++ L
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLEL 583
Query: 435 GEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNN 494
E + + +S Y+++ N+Y+ W ++R+LM+ + V + S I+++
Sbjct: 584 AEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 643
Query: 495 RIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEK 554
+H F A HP DIY L ++ +K +GY P T + DI + +KE L H+EK
Sbjct: 644 TVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEK 703
Query: 555 LALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCS 614
LA+ +GLI + I++VKN +C D H+V K MS + R+I+ ++ R HHF +G CS
Sbjct: 704 LAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCS 763
Query: 615 CGDYW 619
C D W
Sbjct: 764 CNDSW 768
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 191/410 (46%), Gaps = 14/410 (3%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
LF+ P + W I+ + S ++A+ + M + T +L C+
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
R IH +V++ + S + L+ Y+R G + + KVF+ M +R+L S ++L+
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 189 YAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
Y K G + +A L + ME D+V WN ++ YA G+ + + + ++M ++P
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
++ ++L + + G L+ G+ IH Y+ ++ +V V T L+DMY K G L AR +FD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
+ +++VAWNS++ G + ++A L M G+KP +T+ ++ + G K
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
++ MK G+ P + + + + + G + M+ + P++ TLL
Sbjct: 345 ALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Query: 424 WACRLHKNVSLGEEIAEFILSHNLASSG-TYVLLSNIYAASGNWVGAAKV 472
+ G+E+ F L NL L ++Y SG+ A ++
Sbjct: 404 KILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ RV +A + Y +C SL A K+FD + RD +AWN ++M G E+A+ LF EM
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGY----GMEPKIEHFGCMVNLLGR 396
G K D T V +L C + ++G +I +GY G+E + ++ + R
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQI-----HGYVLRLGLESNVSMCNSLIVMYSR 136
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACR----LHKNVSLGEEIAEFILSHNLASSGT 452
G+LE + MK D + W ++L + + + L +E+ L ++ + +
Sbjct: 137 NGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVE-------------KEPGCSIIEVNNRIHEF 499
LLS YA+ G A V M+ +G++ EPG +++ IH +
Sbjct: 196 --LLSG-YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH--LKLGKAIHGY 250
Query: 500 IAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVL 536
I LR+ D+Y+ ++ +K GY P +V
Sbjct: 251 I---LRNQLWYDVYVETTLIDMYIKT-GYLPYARMVF 283
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 301/511 (58%), Gaps = 18/511 (3%)
Query: 25 LAALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYS-SVGHLHHSVTLFNRTPTP 83
++A+I +S+ GL L FKL R + + +L ++ +F+R P
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFP 86
Query: 84 NVFLWTSIIHAHS-----HSDQALSFYARMLAQPV-EPNAFTFSSVLHGCN-LQAARA-- 134
N L+ +++ A+S H+ A SF+ M+ + V PN F + VL L +A +
Sbjct: 87 NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTP 146
Query: 135 -IHCHVIKFAVASAPYVSTGLVGAYARG-GDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
+H H+ K V T L+ +YA + A ++FDEMSER++VS TAML+ YA+
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLL 251
G + A LFE M RDV WN ++ QNG+ E + LFR+M+ E +RP+E+T++
Sbjct: 207 GDISNAVALFEDMP--ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVV 264
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
VLS+C Q G L+ + IH++ +V V +LVD+Y KCG+L++A +F +
Sbjct: 265 CVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV---KPSDVTFVAVLTACGHSGLVSKGW 368
+ AWNSMI +A+HG SEEA+ +F+EM + + KP +TF+ +L AC H GLVSKG
Sbjct: 325 SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
F+LM N +G+EP+IEH+GC+++LLGRAGR +E +++ MK D +WG+LL AC++
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 429 HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
H ++ L E + +++ N + G +++N+Y GNW A + R ++K K PG S
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Query: 489 IIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
IE++N +H+F + D HP++++IY++L+ +
Sbjct: 505 RIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 295/527 (55%), Gaps = 19/527 (3%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFY 105
GL + + L + YS G + + +F+R +VF W +I ++ ++++
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M V P + T VL C + + +H +V + + + LV AYA
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G++ A ++F M R ++S T+++ Y + G L+ AR F+ M RD + W +MID
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV--RDRISWTIMIDG 342
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
Y + G NE L +FR+M + + PDE T+++VL++C LG+LE G WI +Y+ +K +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
V VG AL+DMY KCG + A+K+F ++ RD W +M++G A +G +EA+++F +M
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
M ++P D+T++ VL+AC HSG+V + + F M++ + +EP + H+GCMV++LGRAG ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
E Y+++R M +P+S++WG LL A RLH + + E A+ IL + Y LL NIYA
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 462 ASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNC 521
W +VR + ++K PG S+IEVN HEF+AGD H +S++IY+ LEE+
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Query: 522 RLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGT 568
Y P T +L + G+ + +A F +S PGT
Sbjct: 643 ESTFAAYLPDTSELLFEAGD----------AYSVANRFVRLSGHPGT 679
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 161/361 (44%), Gaps = 74/361 (20%)
Query: 48 RGLDPHPILNFKLQRSYSSV--GHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QAL 102
RG+ P+P KL + S GH+ ++ LF + P P+V +W ++I S D + +
Sbjct: 60 RGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGV 119
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCN-----LQAARAIHCHVIKFAVASAPYVSTGLVGA 157
Y ML + V P++ TF +L+G L + +HCHV+KF + S YV LV
Sbjct: 120 RLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKM 179
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
Y+ G + A VFD R +E DV WN+
Sbjct: 180 YSLCGLMDMARGVFDR--------------------RCKE-------------DVFSWNL 206
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
MI Y + E + L +M V P +TLL VLS+C ++ + + +H YV K
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYA------------- 324
+R+ ALV+ Y CG +D A +IF ++ RDV++W S++ GY
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 325 -------------IHGY-----SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
I GY E+L +F EM G+ P + T V+VLTAC H G +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 367 G 367
G
Sbjct: 387 G 387
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG-ALESGRWI 269
DVV WN MI +++ E + L+ ML E V PD T +L+ + G AL G+ +
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL 157
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS 329
H +V G + V ALV MY CG +D AR +FD DV +WN MI GY
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTACGH---SGLVSKGWEIFNLMKNGYGMEPKIEH 386
EE++ L EM V P+ VT + VL+AC L + E + K EP +
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT----EPSLRL 273
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+VN G ++ + R MK D + W +++
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIV 309
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 281/506 (55%), Gaps = 11/506 (2%)
Query: 21 EVER-LAALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNR 79
EVE + R KS GL + K+ + + ++ LFN+
Sbjct: 8 EVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQ 67
Query: 80 TPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVE-PNAFTFSSVLHGC----NLQA 131
PNVFL+ SII A++H+ + Y ++L + E P+ FTF + C +
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK 191
+ +H H+ KF L+ Y + D+ A KVFDEM ER ++S ++L+ YA+
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLL 251
G++++A+ LF M + +V W MI Y G E + FR+M + PDEI+L+
Sbjct: 188 LGQMKKAKGLFHLML--DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLI 245
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
+VL SC QLG+LE G+WIH Y + V AL++MY KCG + A ++F + +
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF 371
DV++W++MI GYA HG + A+ F+EM VKP+ +TF+ +L+AC H G+ +G F
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 372 NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKN 431
++M+ Y +EPKIEH+GC++++L RAG+LE ++ + M PDS +WG+LL +CR N
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 432 VSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIE 491
+ + + ++ G YVLL+NIYA G W +++R +++ ++K PG S+IE
Sbjct: 426 LDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
Query: 492 VNNRIHEFIAGDLRHPKSQDIYLMLE 517
VNN + EF++GD P +I ++L+
Sbjct: 486 VNNIVQEFVSGDNSKPFWTEISIVLQ 511
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 291/564 (51%), Gaps = 41/564 (7%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y+ G + + +FN + W SII + S +A+ + M+ + + T+
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 121 ----SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S +L+ + +H + IK + VS L+ YA+ G+V + K+F M
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG- 470
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ D V WN +I + G L +
Sbjct: 471 --------------------------------TGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M +V PD T L L C L A G+ IH + E+++G AL++MY KCG
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
L+++ ++F+ + RDVV W MI Y ++G E+AL F +M G+ P V F+A++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC HSGLV +G F MK Y ++P IEH+ C+V+LL R+ ++ + + ++ M PD+
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
+W ++L ACR ++ E ++ I+ N G +L SN YAA W + +R +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVL 536
K + K PG S IEV +H F +GD P+S+ IY LE + + GY P V
Sbjct: 739 KDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVS 798
Query: 537 HDIGEEQKELSLEV-HSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGR 595
++ EE+++ L HSE+LA+AFGL++T PGT ++++KNLRVC DCH V K++SKI GR
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGR 858
Query: 596 KIITRDRNRFHHFENGSCSCGDYW 619
+I+ RD NRFH F++G+CSC D W
Sbjct: 859 EILVRDANRFHLFKDGTCSCKDRW 882
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 196/419 (46%), Gaps = 48/419 (11%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNR-TPTPNVFLWTSIIHAHSHS---DQALSF 104
GLD + KL YS S+++F R +P NV+LW SII A S + +AL F
Sbjct: 34 GLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEF 93
Query: 105 YARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
Y ++ V P+ +TF SV+ C GL A GD+
Sbjct: 94 YGKLRESKVSPDKYTFPSVIKAC------------------------AGLFDA--EMGDL 127
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
E++ D E L A++ Y++ G L AR +F+ M RD+V WN +I Y+
Sbjct: 128 V-YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGYSS 184
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
+G E L ++ ++ + PD T+ +VL + G L ++ G+ +H + V V
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
LV MY K DAR++FD + RD V++N+MI GY EE++R+F E
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-F 303
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
KP +T +VL ACGH +S I+N M K G+ +E + + ++++ + G +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITA 361
Query: 404 YDLVRGMKTDPDSVLW----------GTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
D+ M+ D+V W G L+ A +L K + + EE A+ I L S T
Sbjct: 362 RDVFNSMEC-KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 159/359 (44%), Gaps = 50/359 (13%)
Query: 114 EPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEK 169
+P+ T SSVL C +L A+ I+ +++K V L+ YA+ GD+ +A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA-- 361
Query: 170 VFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
R +F ME +D V WN +I Y Q+G
Sbjct: 362 -----------------------------RDVFNSMEC--KDTVSWNSIISGYIQSGDLM 390
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
E + LF+ M+ + + D IT L ++S +L L+ G+ +HS +++ V AL+
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY KCG + D+ KIF ++ D V WN++I G L++ +M V P
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA 510
Query: 350 TFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
TF+ L C G EI L++ GY E +I + ++ + + G LE +
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN--ALIEMYSKCGCLENSSRVFE 568
Query: 409 GMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG----TYVLLSNIYAAS 463
M + D V W +++A ++ GE+ E ++ SG + V ++ IYA S
Sbjct: 569 RM-SRRDVVTWTGMIYAYGMYGE---GEKALETF--ADMEKSGIVPDSVVFIAIIYACS 621
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 272/457 (59%), Gaps = 9/457 (1%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
++S G + ++ +F+ +P ++ W +I+ + +++A+ Y M ++ V+P+ T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++ C +L + + +V + + + L+ +++ GD+ A ++FD + +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
R++VS T M++ YA+ G L +R LF+ ME +DVV WN MI Q + L LF+
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDME--EKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M +PDEIT++ LS+C QLGAL+ G WIH Y+ + + V +GT+LVDMY KCG
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
++ +A +F I R+ + + ++I G A+HG + A+ F+EM G+ P ++TF+ +L+
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC H G++ G + F+ MK+ + + P+++H+ MV+LLGRAG LEE L+ M + D+
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
+WG LL+ CR+H NV LGE+ A+ +L + + SG YVLL +Y + W A + R +M
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIY 513
GVEK PGCS IEVN + EFI D P+S+ IY
Sbjct: 619 NERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 183/425 (43%), Gaps = 76/425 (17%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYA 106
LDP + S +L +SV + PN+F W I S S+ ++ Y
Sbjct: 83 LDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYK 142
Query: 107 RMLAQ---PVEPNAFTFSSVLHGC-NLQAARAIHC---HVIKFAVASAPYVSTGLVGAYA 159
+ML P+ FT+ + C +L+ + H HV+K + +V + +A
Sbjct: 143 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA 202
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
GD+ +A KVFDE R LVS ++ Y K G +A +++ ME
Sbjct: 203 SCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME------------- 249
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+E V+PD++T++ ++SSC LG L G+ + YV +
Sbjct: 250 --------------------SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY----------- 328
+ + + AL+DM+ KCG + +AR+IFDN+ R +V+W +MI GYA G
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 329 --------------------SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
++AL LF EM KP ++T + L+AC G + G
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
I ++ Y + + +V++ + G + E + G++T +S+ + ++ L
Sbjct: 410 WIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLAL 467
Query: 429 HKNVS 433
H + S
Sbjct: 468 HGDAS 472
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 312/638 (48%), Gaps = 90/638 (14%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTF 120
Y +G + +F P ++ W S+I + +L + ML +P+ F+
Sbjct: 175 YMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFST 234
Query: 121 SSVLHGCN----LQAARAIHCHVIKF---------------------AVASAPYVSTGLV 155
S L C+ + + IHCH ++ V+ A + G++
Sbjct: 235 MSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI 294
Query: 156 -----------GAYARGGDVFSAEKVFDEMSERS-------------------------- 178
G YAR G V A F +MSE++
Sbjct: 295 QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHG 354
Query: 179 ----------LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
+V TA++ Y + G+L+ A ++F+ M ++V+ WN +I Y QNG
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA--EKNVISWNSIIAAYVQNGKN 412
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
L LF+++ + PD T+ ++L + + +L GR IH+Y+ + + +L
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
V MY CG L+DARK F++I+ +DVV+WNS+IM YA+HG+ ++ LF EM V P+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
TF ++L AC SG+V +GWE F MK YG++P IEH+GCM++L+GR G +
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 409 GMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVG 468
M P + +WG+LL A R HK++++ E AE I ++G YVLL N+YA +G W
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 469 AAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGY 528
+++ LM+ G+ + S +E + H F GD H + IY +L+ ++ R+
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS-RM----- 706
Query: 529 TPKTDLVLHDIGEEQKEL-------SLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLD 581
+ D+ +H + + E S HS +LA FGLIST G + + N R+C
Sbjct: 707 VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRK 766
Query: 582 CHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
CH ++ S++T R+I+ D FHHF NG CSCG+YW
Sbjct: 767 CHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 216/473 (45%), Gaps = 62/473 (13%)
Query: 62 RSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAF 118
R ++ + ++ LF+ + FLW +I + +A+ FY+RM+ V+ + F
Sbjct: 72 RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTF 131
Query: 119 TFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
T+ V+ +L+ + IH VIK S YV L+ Y + G + AEKVF+EM
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
ER +VS WN MI Y G L+L
Sbjct: 192 PERDIVS---------------------------------WNSMISGYLALGDGFSSLML 218
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKNGVEVRVGTALVDMYC 293
F++ML +PD + ++ L +C + + + G+ IH + V + +V V T+++DMY
Sbjct: 219 FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYS 278
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFV 352
K G + A +IF+ ++ R++VAWN MI YA +G +A F +M G++P +T +
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGME----PKIEHFGCMVNLLGRAGRLEEGYDLVR 408
+L A + +G I +GY M P + ++++ G G+L+ +++
Sbjct: 339 NLLPASA----ILEGRTI-----HGYAMRRGFLPHMVLETALIDMYGECGQLKSA-EVIF 388
Query: 409 GMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWV 467
+ + + W +++ A + KN S E E S + S T + YA S +
Sbjct: 389 DRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLS 448
Query: 468 GAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEF-IAGDLRHPKSQDIYLMLEEM 519
++ + + V+ + I +N+ +H + + GDL + +++L+++
Sbjct: 449 EGREIHAYI----VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
++T L +A + +A LF+ E + D WNVMI + G+ E + + +M+
Sbjct: 66 ALTRALRGFADSRLMEDALQLFD--EMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF 123
Query: 241 EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDD 300
V+ D T V+ S + +LE G+ IH+ V +V V +L+ +Y K G D
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 301 ARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH 360
A K+F+ + +RD+V+WNSMI GY G +L LF EM G KP + ++ L AC H
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 361 SGLVSKGWEI 370
G EI
Sbjct: 244 VYSPKMGKEI 253
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 43/271 (15%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
RRG PH +L L Y G L + +F+R NV W SII A+ + + AL
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 104 FYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ + + P++ T +S+L +L R IH +++K S + LV YA
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
GD+ A K F+ + + +VS +++ YA HG R + W
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGR---------------ISVW---- 518
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
LF +M+A +V P++ T ++L++C G ++ G W + + G
Sbjct: 519 --------------LFSEMIASRVNPNKSTFASLLAACSISGMVDEG-WEYFESMKREYG 563
Query: 280 VE--VRVGTALVDMYCKCGSLDDARKIFDNI 308
++ + ++D+ + G+ A++ + +
Sbjct: 564 IDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 267/468 (57%), Gaps = 16/468 (3%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
YS G+++ + +F+ NV W S+I + +AL + ML VEP+ T
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 121 SSVLHGCN----LQAARAIHCHVIKF-AVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+SV+ C ++ + +H V+K + + +S V YA+ + A +FD M
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
R++++ T+M++ YA + ARL+F M R+VV WN +I Y QNG E L LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMA--ERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH----KNGVE--VRVGTALV 289
+ E V P + +L +C L L G H +V H ++G E + VG +L+
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY KCG +++ +F +++RD V+WN+MI+G+A +GY EAL LF EM G KP +
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
T + VL+ACGH+G V +G F+ M +G+ P +H+ CMV+LLGRAG LEE ++
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 410 MKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGA 469
M PDSV+WG+LL AC++H+N++LG+ +AE +L ++SG YVLLSN+YA G W
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 470 AKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLE 517
VR M+ GV K+PGCS I++ H F+ D HP+ + I+ +L+
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 109/452 (24%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA------------ 94
+ G + +L +YS G L +F++ P N++ W S++
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADS 107
Query: 95 ----------------------HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----N 128
H ++AL ++A M + N ++F+SVL C +
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
+ +H + K S Y+ + LV Y++ G+V A++VFDEM +R++VS +++TC
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
+ QNG E L +F+ ML +V PDE+
Sbjct: 228 F---------------------------------EQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 249 TLLAVLSSCGQLGALESGRWIHS-YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
TL +V+S+C L A++ G+ +H V N K ++ + A VDMY KC + +AR IFD+
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 308 -------------------------------IVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
+ +R+VV+WN++I GY +G +EEAL LF
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI-FNLMKNGY----GMEPKIEHFGCMV 391
+ V P+ +F +L AC + G + +++K+G+ G E I ++
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
++ + G +EEGY + R M + D V W ++
Sbjct: 435 DMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 120 FSSVLHGC---NLQA--ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
F+ +L C L A R +H VIK ++ ++ L+ AY++ G + +VFD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
+R++ + +++T K G L EA LF M RD WN M+ +AQ+ E L
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP--ERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F M E +E + +VLS+C L + G +HS + +V +G+ALVDMY K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG+++DA+++FD + DR+VV+WNS+I + +G + EAL +F M V+P +VT +V
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
++AC + G E+ + + I V++ + R++E
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/475 (36%), Positives = 275/475 (57%), Gaps = 13/475 (2%)
Query: 69 HLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLH 125
H + + N++ + WTS I+ + + +A ++ M VEPN TF ++L
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS 79
Query: 126 GCNLQAARA------IHCHVIKFAV-ASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
GC + + +H + K + + V T ++G Y++ G A VFD M +++
Sbjct: 80 GCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
V+ M+ Y + G++ A +F+ M RD++ W MI+ + + G E LL FR+M
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMP--ERDLISWTAMINGFVKKGYQEEALLWFREM 197
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
V+PD + ++A L++C LGAL G W+H YV + VRV +L+D+YC+CG +
Sbjct: 198 QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV 257
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
+ AR++F N+ R VV+WNS+I+G+A +G + E+L F +M G KP VTF LTAC
Sbjct: 258 EFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
H GLV +G F +MK Y + P+IEH+GC+V+L RAGRLE+ LV+ M P+ V+
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV 377
Query: 419 WGTLLWACRLH-KNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
G+LL AC H N+ L E + + + N+ S YV+LSN+YAA G W GA+K+R MK
Sbjct: 378 IGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT 532
G G++K+PG S IE+++ +H F+AGD H ++ I +LE ++ L+ G +T
Sbjct: 438 GLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 282/541 (52%), Gaps = 71/541 (13%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
RR L + KL + S + +V +FN+ PNV L S+I AH+ + Q A
Sbjct: 44 RRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFF 103
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++ M + + FT+ +L C+ L + +H H+ K ++S YV L+ Y+
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYS 163
Query: 160 R---------------------------------GGDVFSAEKVFDEMSERSLVSVTAML 186
R G++ A ++FDEM +R L+S ML
Sbjct: 164 RCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTML 223
Query: 187 TCYA-------------------------------KHGRLREARLLFEGMEADSRDVVCW 215
YA K G + AR++F+ M +++VV W
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
++I YA+ G+ E L +M+A ++ D ++++L++C + G L G IHS +
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKR 343
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
G V AL+DMY KCG+L A +F++I +D+V+WN+M+ G +HG+ +EA+ L
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
F M G++P VTF+AVL +C H+GL+ +G + F M+ Y + P++EH+GC+V+LLG
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
R GRL+E +V+ M +P+ V+WG LL ACR+H V + +E+ + ++ + G Y L
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSL 523
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLM 515
LSNIYAA+ +W G A +RS MK GVEK G S +E+ + IHEF D HPKS IY M
Sbjct: 524 LSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQM 583
Query: 516 L 516
L
Sbjct: 584 L 584
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 300/582 (51%), Gaps = 50/582 (8%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQA---LS 103
R GL + + + Y G L + +F++ T ++ ++ + +A L
Sbjct: 212 RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALK 271
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ ++ + VE ++F FS VL C L + IH V K + S V T LV Y
Sbjct: 272 LFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ SA + F E+ E + VS +A+++ Y + + EA F+ + + + + +
Sbjct: 332 KCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI------L 385
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+ + + C +VL+ C G + + S +G+
Sbjct: 386 NSFTYTSIFQAC--------------------SVLADCNIGGQVHADAIKRSLIGSQYG- 424
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
+AL+ MY KCG LDDA ++F+++ + D+VAW + I G+A +G + EALRLF++M
Sbjct: 425 -----ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
G+KP+ VTF+AVLTAC H+GLV +G + M Y + P I+H+ CM+++ R+G
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
L+E ++ M +PD++ W L C HKN+ LGE E + + + YVL N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 460 YAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
Y +G W AA++ LM ++KE CS I+ +IH FI GD HP++Q+IY L+E
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Query: 520 NCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLIST--RPGTTIKIVKNLR 577
+ ++ + + E++E L+ HSE+LA+AFGLIS IK+ KNLR
Sbjct: 660 DGFMEGDMFQCNMT--------ERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLR 710
Query: 578 VCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
C DCH K +S +TG +I+ RD RFHHF+ G CSC DYW
Sbjct: 711 ACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 178/413 (43%), Gaps = 56/413 (13%)
Query: 47 RRGLD-PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQAL 102
R G++ P +L + + Y L + LF+ N T++I A++ D+A+
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
++ MLA +P + ++++L L R IH HVI+ + S + TG+V Y
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+ G + A++VFD+M+ + V+ T ++ Y + GR R+A
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA-------------------- 269
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
L LF ++ E V D VL +C L L G+ IH+ V
Sbjct: 270 -------------LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL 316
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
EV VGT LVD Y KC S + A + F I + + V+W+++I GY EEA++ F
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 339 MCGMGVKP-SDVTFVAVLTACGHSGLVSKGWEIF------NLMKNGYGMEPKIEHFGCMV 391
+ + T+ ++ AC + G ++ +L+ + YG ++
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA-------LI 429
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILS 444
+ + G L++ ++ M +PD V W + + N S + E ++S
Sbjct: 430 TMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 188/468 (40%), Gaps = 71/468 (15%)
Query: 95 HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYV 150
H ++A F M V +++++ + C +L R +H + + +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 151 STGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSR 210
++ Y + A+K+FDEMSE + VS T
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRT--------------------------- 153
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
MI YA+ G+ ++ + LF MLA +P +L S AL+ GR IH
Sbjct: 154 ------TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
++V + T +V+MY KCG L A+++FD + + VA +++GY G +
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
+AL+LF ++ GV+ F VL AC ++ G +I + G+E ++ +
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPL 326
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIAEF--ILSHNL 447
V+ + E + ++ +P+ V W ++ C++ + E + F + S N
Sbjct: 327 VDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQ---FEEAVKTFKSLRSKNA 382
Query: 448 ASSGTYVLLSNIYAAS-------GNWVGAAKVRSLMKGSG------VEKEPGCSIIEVNN 494
+ ++ S A S G V A ++ + GS + C ++ N
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 495 RIHE------------FIAGDLRHPKSQDIYLMLEEM-NCRLKANGYT 529
+ E FI+G + + + + E+M +C +K N T
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 298/582 (51%), Gaps = 44/582 (7%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFY 105
G +P + ++ + G + + LF+ P N++ + SII + +A +
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + + TF+ +L ++ + +H +K V +VS GL+ Y++
Sbjct: 213 KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKC 272
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
GD+ A F+ M E++ V+ ++ YA HG EA
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEA----------------------- 309
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
L L M V D+ TL ++ +L LE + H+ + + E
Sbjct: 310 ----------LCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ TALVD Y K G +D AR +FD + +++++WN+++ GYA HG +A++LF++M
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
V P+ VTF+AVL+AC +SGL +GWEIF M +G++P+ H+ CM+ LLGR G L+
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
E +R +W LL ACR+ +N+ LG +AE + G YV++ N+Y
Sbjct: 480 EAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYN 539
Query: 462 ASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGD----LRHPKSQDIYLMLE 517
+ G AA V ++ G+ P C+ +EV ++ H F++GD + IY ++
Sbjct: 540 SMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVD 599
Query: 518 EMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLR 577
E+ + GY+ + +L D+ E+++E HSEKLA+A+GL++T ++I +N R
Sbjct: 600 ELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHR 659
Query: 578 VCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+C +CH V++ +S +TGR+++ RD +RFHHF+ G CSCG YW
Sbjct: 660 ICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 275/473 (58%), Gaps = 42/473 (8%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFT 119
S S G L ++ LF+ P P+V + ++ + S ++ +S Y M + V P+ +T
Sbjct: 55 SLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYT 114
Query: 120 FSSVLHGCNLQAAR----AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
F+ VL C+ R A H V++ YV L+ +A GD+ A ++FD+ +
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGM-------------------EADS------- 209
+ V+ ++M + YAK G++ EA LF+ M E DS
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 210 ---RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG 266
+DVV WN MI Y G P E L +F++M PD +T+L++LS+C LG LE+G
Sbjct: 235 FTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG 294
Query: 267 RWIHSYVGNHKN-GVEVRVGT----ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIM 321
+ +H Y+ + + VGT AL+DMY KCGS+D A ++F + DRD+ WN++I+
Sbjct: 295 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIV 354
Query: 322 GYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGME 381
G A+H ++E ++ +F+EM + V P++VTF+ V+ AC HSG V +G + F+LM++ Y +E
Sbjct: 355 GLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 413
Query: 382 PKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEF 441
P I+H+GCMV++LGRAG+LEE + V MK +P++++W TLL AC+++ NV LG+ E
Sbjct: 414 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 473
Query: 442 ILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNN 494
+LS SG YVLLSNIYA++G W G KVR + + V+K G S+IE ++
Sbjct: 474 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 263/483 (54%), Gaps = 49/483 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPN--VFLWTSIIHAHS---HSDQA 101
R G+D + +Y G L + +F + V W S+ A+S + A
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGA 157
Y ML + +P+ TF ++ C L R IH H I
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG-------------- 286
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
+++ + ++ ++ Y+K ARLLF+ M SR V W V
Sbjct: 287 -----------------TDQDIEAINTFISMYSKSEDTCSARLLFDIMT--SRTCVSWTV 327
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHS----YV 273
MI YA+ G +E L LF M+ +PD +TLL+++S CG+ G+LE+G+WI + Y
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
N V + AL+DMY KCGS+ +AR IFDN ++ VV W +MI GYA++G EAL
Sbjct: 388 CKRDN---VMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
+LF +M + KP+ +TF+AVL AC HSG + KGWE F++MK Y + P ++H+ CMV+L
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTY 453
LGR G+LEE +L+R M PD+ +WG LL AC++H+NV + E+ AE + + + Y
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPY 564
Query: 454 VLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIY 513
V ++NIYAA+G W G A++RS+MK ++K PG S+I+VN + H F G+ H +++ IY
Sbjct: 565 VEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Query: 514 LML 516
L
Sbjct: 625 FTL 627
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 39/274 (14%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
++L + M EPN FTF V C ++ +H H+IK S +V T V
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
+ + V A KVF+ M ER + AML+
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLS---------------------------- 126
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+ Q+G ++ LFR+M ++ PD +T++ ++ S +L+ +H+
Sbjct: 127 -----GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV--DRDVVAWNSMIMGYAIHGYSEEAL 333
V+V V + Y KCG LD A+ +F+ I DR VV+WNSM Y++ G + +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
L+ M KP TF+ + +C + +++G
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHS 271
V WN+ I E P E LLLFR+M P+ T V +C +L + +H+
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEE 331
++ +V VGTA VDM+ KC S+D A K+F+ + +RD WN+M+ G+ G++++
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMV 391
A LF EM + P VT + ++ + + K E + + G++ ++ +
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 392 NLLGRAGRLEEGYDLVRGM-KTDPDSVLWGTLLWA 425
+ G+ G L+ + + + D V W ++ A
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 278/508 (54%), Gaps = 39/508 (7%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFS 121
+S L +V+ + PNVF++ ++ SH ++L Y RML V P+++T+S
Sbjct: 816 TSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYS 875
Query: 122 SVLHGCNLQA--ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
S++ + + ++ H+ KF + T L+ Y+ G + A KVFDEM ER
Sbjct: 876 SLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDD 935
Query: 180 VSVTAMLTCYAK-------------------------------HGRLREARLLFEGMEAD 208
++ T M++ Y + G L +A LF M
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV- 994
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
+D++ W MI Y+QN E + +F KM+ E + PDE+T+ V+S+C LG LE G+
Sbjct: 995 -KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE 1053
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+H Y + ++V +G+ALVDMY KCGSL+ A +F N+ +++ WNS+I G A HG+
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGF 1113
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
++EAL++F +M VKP+ VTFV+V TAC H+GLV +G I+ M + Y + +EH+G
Sbjct: 1114 AQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG 1173
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA 448
MV+L +AG + E +L+ M+ +P++V+WG LL CR+HKN+ + E ++
Sbjct: 1174 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPM 1233
Query: 449 SSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE-PGCSIIEVNNRIHEFIAGDLRHP 507
+SG Y LL ++YA W A++R M+ G+EK PG S I ++ R H F A D H
Sbjct: 1234 NSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHS 1293
Query: 508 KSQDIYLMLEEMNCRLKANGYTPKTDLV 535
S ++ L+L+E+ ++ GY +T+ V
Sbjct: 1294 ASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 129/272 (47%), Gaps = 42/272 (15%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y +G+L + +LFN+ P ++ WT++I +S + +A++ + +M+ + + P+ T
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 1035
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+V+ C L+ + +H + ++ Y+ + LV Y++ G + A VF + +
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
++L +++ A HG +AQ E L +F
Sbjct: 1096 KNLFCWNSIIEGLAAHG----------------------------FAQ-----EALKMFA 1122
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH-SYVGNHKNGVEVRVGTALVDMYCKC 295
KM E V+P+ +T ++V ++C G ++ GR I+ S + ++ V +V ++ K
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Query: 296 GSLDDARKIFDNI-VDRDVVAWNSMIMGYAIH 326
G + +A ++ N+ + + V W +++ G IH
Sbjct: 1183 GLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTF 120
YS G L ++ +F P N+F W SII AH + +AL +A+M + V+PNA TF
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 121 SSVLHGCN----LQAARAIHCHVI-KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
SV C + R I+ +I +++ S G+V +++ G ++ A ++ M
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 176 -ERSLVSVTAMLTCYAKHGRLREARLLFEGM 205
E + V A+L H L A + F +
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 303/565 (53%), Gaps = 43/565 (7%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPN 116
L + Y + G + LF+R ++ WT++I + ++ D+A+ Y M V+P+
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
T ++VL C +L +H IK + S V+ L+ Y++ + A +F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
+ ++++S T+++ + R EA
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEA---------------------------------- 483
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
L+F + + ++P+ ITL A L++C ++GAL G+ IH++V G++ + AL+DMY
Sbjct: 484 LIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
+CG ++ A F N +DV +WN ++ GY+ G + LFD M V+P ++TF+
Sbjct: 544 VRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
++L C S +V +G F+ M++ YG+ P ++H+ C+V+LLGRAG L+E + ++ M
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
PD +WG LL ACR+H + LGE A+ I + S G Y+LL N+YA G W AKV
Sbjct: 662 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 721
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT 532
R +MK +G+ + GCS +EV ++H F++ D HP++++I +LE ++ G T +
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKIS 781
Query: 533 DLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKI 592
+ D E ++ HSE+ A+AFGLI+T PG I + KNL +C +CH +K +SK
Sbjct: 782 ESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKT 841
Query: 593 TGRKIITRDRNRFHHFENGSCSCGD 617
R+I RD FHHF++G CSCGD
Sbjct: 842 VRREISVRDAEHFHHFKDGECSCGD 866
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 41/318 (12%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARML-AQPVEPNAFT 119
+ G+L + +F + N+F W ++ ++ + D+A+ Y RML V+P+ +T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
F VL C +L + +H HV+++ Y DV
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYG--------------YELDIDV----------- 233
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
V A++T Y K G ++ ARLLF+ M RD++ WN MI Y +NGM +E L LF
Sbjct: 234 ------VNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCHEGLELF 285
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
M V PD +TL +V+S+C LG GR IH+YV V++ V +L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
GS +A K+F + +D+V+W +MI GY + ++A+ + M VKP ++T AVL
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 356 TACGHSGLVSKGWEIFNL 373
+AC G + G E+ L
Sbjct: 406 SACATLGDLDTGVELHKL 423
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 48/369 (13%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y G + + LF+R P ++ W ++I + + + L + M V+P+ T
Sbjct: 241 YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTL 300
Query: 121 SSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+SV+ C L + R IH +VI +TG F+ +
Sbjct: 301 TSVISACELLGDRRLGRDIHAYVI----------TTG-----------FAVD-------- 331
Query: 177 RSLVSVTAMLT-CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+SV LT Y G REA LF ME +D+V W MI Y N +P++ + +
Sbjct: 332 ---ISVCNSLTQMYLNAGSWREAEKLFSRME--RKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
R M + V+PDEIT+ AVLS+C LG L++G +H + V V L++MY KC
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
+D A IF NI ++V++W S+I G ++ EAL +M M ++P+ +T A L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAAL 505
Query: 356 TACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
AC G + G EI ++++ G G++ + + ++++ R GR+ + K D
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCGRMNTAWSQFNSQKKDV 563
Query: 415 DSVLWGTLL 423
S W LL
Sbjct: 564 TS--WNILL 570
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 9/269 (3%)
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
A G V+S MS + A L + + G L +A +F M R++ WN
Sbjct: 109 AQEEGSKVYSI--ALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS--ERNLFSWN 164
Query: 217 VMIDEYAQNGMPNECLLLFRKML-AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
V++ YA+ G +E + L+ +ML V+PD T VL +CG + L G+ +H +V
Sbjct: 165 VLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR 224
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+ +++ V AL+ MY KCG + AR +FD + RD+++WN+MI GY +G E L L
Sbjct: 225 YGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLEL 284
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLL 394
F M G+ V P +T +V++AC G G +I ++ G+ ++ I + +
Sbjct: 285 FFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD--ISVCNSLTQMY 342
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
AG E L M+ D V W T++
Sbjct: 343 LNAGSWREAEKLFSRMER-KDIVSWTTMI 370
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 35/288 (12%)
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
NG E + L M +V DE +A++ C A E G ++S + + + V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-G 343
G A + M+ + G+L DA +F + +R++ +WN ++ GYA GY +EA+ L+ M + G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEI-FNLMKNGYGME--------------------- 381
VKP TF VL CG +++G E+ ++++ GY ++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 382 ------PK--IEHFGCMVNLLGRAGRLEEGYDL---VRGMKTDPDSVLWGTLLWACRLHK 430
P+ I + M++ G EG +L +RG+ DPD + +++ AC L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 431 NVSLGEEIAEFILSHNLASSGTYV-LLSNIYAASGNWVGAAKVRSLMK 477
+ LG +I ++++ A + L+ +Y +G+W A K+ S M+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 289/568 (50%), Gaps = 42/568 (7%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFT 119
+Y S G + +V +F N + +++ + H +AL + ML + VE F+
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 120 FSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+S + C L + + IH IKF A P + T L+ R + AE++FD+
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+L S A + +I YA+NG+P++ + LF
Sbjct: 480 S-NLDSSKATTS------------------------------IIGGYARNGLPDKAVSLF 508
Query: 236 RKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
+ L E K+ DE++L +L+ CG LG E G IH Y ++ +G +L+ MY K
Sbjct: 509 HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAK 568
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
C DDA KIF+ + + DV++WNS+I Y + +EAL L+ M +KP +T V
Sbjct: 569 CCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLV 628
Query: 355 LTACGH--SGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
++A + S +S ++F MK Y +EP EH+ V +LG G LEE D + M
Sbjct: 629 ISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPV 688
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
P+ + LL +CR+H N S+ + +A+ ILS + Y+L SNIY+ASG W + +
Sbjct: 689 QPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMI 748
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT 532
R M+ G K P S I N+IH F A D HP+ +DIY LE + GY P T
Sbjct: 749 REEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNT 808
Query: 533 DLVLHDIGEEQKELSLEVHSEKLALAFGLISTRP-GTTIKIVKNLRVCLDCHSVMKMMSK 591
+ VL ++ E K+ L HS KLA+ +G++S+ G ++++KN+ +C DCH K +S
Sbjct: 809 EYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISV 868
Query: 592 ITGRKIITRDRNRFHHFENGSCSCGDYW 619
+ R+I+ RD + FHHF NG CSC D W
Sbjct: 869 VVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 164/401 (40%), Gaps = 80/401 (19%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARML-AQPVEP 115
L +Y +G ++ +F +P V +T++I S + +AL + RM A V+P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 116 NAFTFSSVLHGCNLQAAR-----AIHCHVIKFAVASAPYVSTGLVGAYAR--GGDVFSAE 168
N +TF ++L C ++ +R IH ++K ++ +VS L+ Y + G
Sbjct: 180 NEYTFVAILTAC-VRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
K+FDE+ +R DV WN ++ + G
Sbjct: 239 KLFDEIPQR---------------------------------DVASWNTVVSSLVKEGKS 265
Query: 229 NECLLLFRKM-LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
++ LF +M E D TL +LSSC L GR +H E+ V A
Sbjct: 266 HKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNA 325
Query: 288 LVDMYCKC-------------------------------GSLDDARKIFDNIVDRDVVAW 316
L+ Y K G +D A +IF N+ +++ + +
Sbjct: 326 LIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITY 385
Query: 317 NSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MK 375
N+++ G+ +G+ +AL+LF +M GV+ +D + + + ACG +I +K
Sbjct: 386 NALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIK 445
Query: 376 NGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
G P I+ ++++ R R+ + ++ ++ DS
Sbjct: 446 FGTAFNPCIQ--TALLDMCTRCERMADAEEMFDQWPSNLDS 484
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ R+G AL+ Y K G +A +F ++ VV++ ++I G++ EAL++F M
Sbjct: 113 KTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMR 172
Query: 341 GMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGY 378
G V+P++ TFVA+LTAC S G +I L+ K+G+
Sbjct: 173 KAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF 212
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 266/468 (56%), Gaps = 12/468 (2%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSV 123
+ +L ++ LF+ FL+ +I A H +++ Y + + P+ TF+ +
Sbjct: 29 IPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 88
Query: 124 LHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
+ R +H + S + T L+ AYA+ G + A +VFDEMS+R +
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
AM+T Y + G ++ A LF+ M ++V W +I ++QNG +E L +F M
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMP--RKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 240 AEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
+K V+P+ IT+++VL +C LG LE GR + Y + + V A ++MY KCG +
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 299 DDARKIFDNIVD-RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
D A+++F+ + + R++ +WNSMI A HG +EAL LF +M G KP VTFV +L A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H G+V KG E+F M+ + + PK+EH+GCM++LLGR G+L+E YDL++ M PD+V
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
+WGTLL AC H NV + E +E + + G V++SNIYAA+ W G ++R LMK
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
Query: 478 GSGVEKEPGCS-IIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
+ K G S +EV +H+F D HP+S +IY +LEE+ R+K
Sbjct: 447 KETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 44/280 (15%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLA-QPVEPNAFT 119
Y G + ++ LF+ P NV WT++I S + +AL + M + V+PN T
Sbjct: 158 YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHIT 217
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM- 174
SVL C L+ R + + + YV + Y++ G + A+++F+E+
Sbjct: 218 VVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG 277
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
++R+L S +M+ A HG+ EA L L
Sbjct: 278 NQRNLCSWNSMIGSLATHGKHDEA---------------------------------LTL 304
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN-HKNGVEVRVGTALVDMYC 293
F +ML E +PD +T + +L +C G + G+ + + HK ++ ++D+
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLG 364
Query: 294 KCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEA 332
+ G L +A + + + D V W +++ + HG E A
Sbjct: 365 RVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 271/465 (58%), Gaps = 11/465 (2%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARML--AQPVEPNAFT 119
+S ++++ +F R N F+W +II S S + A+S + ML + V+P T
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 120 FSSVL--HGCNLQA--ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+ SV +G QA R +H VIK + ++ ++ Y G + A ++F M
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+V+ +M+ +AK G + +A+ LF+ E R+ V WN MI + +NG + L +F
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFD--EMPQRNGVSWNSMISGFVRNGRFKDALDMF 246
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
R+M + V+PD T++++L++C LGA E GRWIH Y+ ++ + V TAL+DMYCKC
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G +++ +F+ + + WNSMI+G A +G+ E A+ LF E+ G++P V+F+ VL
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
TAC HSG V + E F LMK Y +EP I+H+ MVN+LG AG LEE L++ M + D
Sbjct: 367 TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+V+W +LL ACR NV + + A+ + + + YVLLSN YA+ G + A + R L
Sbjct: 427 TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLL 486
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN 520
MK +EKE GCS IEV+ +HEFI+ HPKS +IY +L+ +N
Sbjct: 487 MKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILN 531
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 272/484 (56%), Gaps = 14/484 (2%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALS 103
+ GL+ ++ L Y+S+G + + +F+ P +V W +I ++ + A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 104 FYARMLAQP-VEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVAS---APYVSTGLVGAYA 159
+ RM + ++ + T S L C+ I + +F V + + LV +
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + A VFD M ++++ T+M+ Y GR+ EAR+LFE + +DVV W M+
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE--RSPVKDVVLWTAMM 251
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+ Y Q +E L LFR M +RPD L+++L+ C Q GALE G+WIH Y+ ++
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
V+ VGTALVDMY KCG ++ A ++F I +RD +W S+I G A++G S AL L+ EM
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
+GV+ +TFVAVLTAC H G V++G +IF+ M + ++PK EH C+++LL RAG
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 400 LEEGYDLVRGMKTDPDSVL---WGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLL 456
L+E +L+ M+ + D L + +LL A R + NV + E +AE + ++ S + LL
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLL 491
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGD--LRHPKSQDIYL 514
+++YA++ W VR MK G+ K PGCS IE++ HEFI GD L HPK +I
Sbjct: 492 ASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINS 551
Query: 515 MLEE 518
ML +
Sbjct: 552 MLHQ 555
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 73/386 (18%)
Query: 82 TPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARA 134
TP++ ++ ++ + + + L+ + + Q + P+ FT VL +
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 135 IHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGR 194
+H + +K + YVS L+G YA G + KVFDEM +R +VS +++ Y +GR
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 195 LREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
+A +F+ M +S ++ DE T+++ L
Sbjct: 128 FEDAIGVFKRMSQES--------------------------------NLKFDEGTIVSTL 155
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVV 314
S+C L LE G I+ +V + VR+G ALVDM+CKCG LD AR +FD++ D++V
Sbjct: 156 SACSALKNLEIGERIYRFVVTEFE-MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 315 AWNSMIMGYA--------------------------IHGYSE-----EALRLFDEMCGMG 343
W SM+ GY ++GY + EAL LF M G
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
++P + V++LT C +G + +G I + K+ +V++ + G +E
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVG-TALVDMYAKCGCIETA 333
Query: 404 YDLVRGMKTDPDSVLWGTLLWACRLH 429
++ +K + D+ W +L++ ++
Sbjct: 334 LEVFYEIK-ERDTASWTSLIYGLAMN 358
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 307/629 (48%), Gaps = 65/629 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHSD--- 99
+ G+ P + L Y+ +G ++ L + T +VF WT++I H+
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLV 155
QAL + +M V PNA T S + C+ + +H +K V LV
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHG----------RLREARL----- 200
Y++ G + A KVFD + + + + +M+T Y + G R+++A L
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 201 --------------------LFEGMEAD---SRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
LF+ ME D R+ WN++I Y QNG +E L LFRK
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
M + P+ +T+L++L +C L + R IH V V AL D Y K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
++ +R IF + +D++ WNS+I GY +HG AL LF++M G+ P+ T +++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
G G V +G ++F + N Y + P +EH MV L GRA RLEE ++ M ++
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL-- 475
+W + L CR+H ++ + AE + S ++ T ++S IYA +GA RSL
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA-----LGAKLGRSLEG 749
Query: 476 ---MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT 532
+ + ++K G S IEV N IH F GD + +Y ++E+M+ RL
Sbjct: 750 NKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS-RLDNRSDQYNG 808
Query: 533 DLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPG--TTIKIVKNLRVCLDCHSVMKMMS 590
+L I EE +E + +HSEK A+AFGLIS+ TTI+I+KNLR+C DCH K +S
Sbjct: 809 ELW---IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVS 865
Query: 591 KITGRKIITRDRNRFHHFENGSCSCGDYW 619
K G I+ D HHF+NG CSC DYW
Sbjct: 866 KRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 223/463 (48%), Gaps = 48/463 (10%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYAR 107
+P + KL Y+ G + + +F+ N+F W+++I A+S + + +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 108 MLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
M+ V P+ F F +L GC +++A + IH VIK ++S VS ++ YA+ G+
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNVMIDE 221
+ A K F M ER +++ ++L Y ++G+ EA L + ME + S +V WN++I
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 222 YAQ-----------------------------------NGMPNECLLLFRKMLAEKVRPD 246
Y Q NGM + L +FRKM V P+
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
+T+++ +S+C L + G +HS +V VG +LVDMY KCG L+DARK+FD
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
++ ++DV WNSMI GY GY +A LF M ++P+ +T+ +++ +G +
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
++F M+ ++ + ++ + G+ +E +L R M+ P+SV +LL
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 424 WACRLHKNVSLGEEIAEFILSHNL-ASSGTYVLLSNIYAASGN 465
AC + EI +L NL A L++ YA SG+
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
F +E + T +L+ YAK G + +AR +F+ M R++ W+ MI Y++ E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR--ERNLFTWSAMIGAYSRENRWRE 164
Query: 231 CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVD 290
LFR M+ + V PD+ +L C G +E+G+ IHS V +RV +++
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
+Y KCG LD A K F + +RDV+AWNS+++ Y +G EEA+ L EM G+ P VT
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM 410
+ ++ G ++ M+ +G+ + + M++ L G + D+ R M
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 411 ---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV-------LLSNIY 460
P++V + + AC K ++ G E+ H++A ++ L ++Y
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEV------HSIAVKMGFIDDVLVGNSLVDMY 397
Query: 461 AASGNWVGAAKVRSLMKGSGV 481
+ G A KV +K V
Sbjct: 398 SKCGKLEDARKVFDSVKNKDV 418
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
D +NG E + + + T L +L SC G++ GR +H+ G
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE 112
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+V V T L+ MY KCG + DARK+FD++ +R++ W++MI Y+ E +LF
Sbjct: 113 P-DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M GV P D F +L C + G V G I +++ GM + ++ + + G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAKCG 230
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWA 425
L+ R M+ + D + W ++L A
Sbjct: 231 ELDFATKFFRRMR-ERDVIAWNSVLLA 256
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 241/446 (54%), Gaps = 37/446 (8%)
Query: 75 TLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC---- 127
++ NR +PN F S+I A+++S + AL+ + ML PV P+ ++F+ VL C
Sbjct: 95 SILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFC 154
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
+ R IH IK + + +V LV Y R G A KV D M R VS ++L+
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 188 CYAKHGRLREARLLFEGMEA--------------------------DS---RDVVCWNVM 218
Y + G + EAR LF+ ME DS RDVV WN M
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKV-RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
+ YA G NE L +F KML + +PD TL++VLS+C LG+L G W+H Y+ H
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
+E + TALVDMY KCG +D A ++F RDV WNS+I ++HG ++AL +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
EM G KP+ +TF+ VL+AC H G++ + ++F +M + Y +EP IEH+GCMV+LLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLS 457
G++EE +LV + D S+L +LL AC+ + E IA +L NL S Y +S
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 458 NIYAASGNWVGAAKVRSLMKGSGVEK 483
N+YA+ G W R M+ V +
Sbjct: 515 NLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 57 NFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPV 113
NF + Y++ G + + +F+ P +V W +++ A++H ++ L + +ML
Sbjct: 241 NFMIS-GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 114 E-PNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
E P+ FT SVL C +L +H ++ K + +++T LV Y++ G + A
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
+VF S+R DV WN +I + + +G+
Sbjct: 360 EVFRATSKR---------------------------------DVSTWNSIISDLSVHGLG 386
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN-HKNGVEVRVGTA 287
+ L +F +M+ E +P+ IT + VLS+C +G L+ R + + + ++ +
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 288 LVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
+VD+ + G +++A ++ + I D + S++ G E+A R+ + + + ++
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 347 S 347
S
Sbjct: 507 S 507
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALS 103
+ G++ L L YS G + ++ +F T +V W SII H AL
Sbjct: 332 KHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAY- 158
++ M+ + +PN TF VL CN L AR + F + S+ Y + Y
Sbjct: 392 IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL------FEMMSSVYRVEPTIEHYG 445
Query: 159 ------ARGGDVFSAEKVFDEM-SERSLVSVTAMLTCYAKHGRLREA-RLLFEGMEADSR 210
R G + AE++ +E+ ++ + + + ++L + G+L +A R+ +E + R
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV 243
D + M + YA +G + + R M AE+V
Sbjct: 506 DSSGYAQMSNLYASDGRWEKVIDGRRNMRAERV 538
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 249/457 (54%), Gaps = 20/457 (4%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y L + +F+ + W +II AH + + L + ML +EP+ FTF
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 121 SSVLHGC---NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
S+L C +L IH ++K +AS V L+ Y++ G + AEK+ +R
Sbjct: 487 GSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
+ VS T + RL+E V WN +I Y + +LF +
Sbjct: 547 ANVSGTMEELEKMHNKRLQEM-------------CVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
M+ + PD+ T VL +C L + G+ IH+ V + +V + + LVDMY KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
L D+R +F+ + RD V WN+MI GYA HG EEA++LF+ M +KP+ VTF+++L A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H GL+ KG E F +MK YG++P++ H+ MV++LG++G+++ +L+R M + D V
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 418 LWGTLLWACRLHK-NVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
+W TLL C +H+ NV + EE +L + S Y LLSN+YA +G W + +R M
Sbjct: 774 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIY 513
+G ++KEPGCS +E+ + +H F+ GD HP+ ++IY
Sbjct: 834 RGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY 870
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 46/366 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
R G D + L Y+ S+ +F P N W++II ++ AL
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
F+ M + ++SVL C L+ +H H +K + + + G+V
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK-----SDFAADGIVR--- 319
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
TA L YAK +++A++LF+ E +R +N MI
Sbjct: 320 -----------------------TATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMI 354
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y+Q + LLLF ++++ + DEI+L V +C + L G I+
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
++V V A +DMY KC +L +A ++FD + RD V+WN++I + +G E L LF M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGC-MVNLLGRA 397
++P + TF ++L AC G + G EI +++K+G + GC ++++ +
Sbjct: 475 LRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKC 530
Query: 398 GRLEEG 403
G +EE
Sbjct: 531 GMIEEA 536
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 125/295 (42%), Gaps = 15/295 (5%)
Query: 69 HLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCN 128
H+ SV FNR T + + S++ L Q + FS V C
Sbjct: 9 HMTRSVVSFNRCLTEKI---------SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECA 59
Query: 129 LQAA----RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTA 184
Q A + H H+I +V L+ Y D SA VFD+M R +VS
Sbjct: 60 KQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK 119
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
M+ Y+K + +A F M RDVV WN M+ Y QNG + + +F M E +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPV--RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
D T +L C L G IH V +V +AL+DMY K ++ ++
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
F I +++ V+W+++I G + AL+ F EM + S + +VL +C
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
+++ Y K + A F+ + RDVV+WNSM+ GY +G S +++ +F +M G++
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
TF +L C S G +I ++ G + + ++++ + R E +
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLG 435
+G+ + +SV W ++ C + +SL
Sbjct: 239 QGI-PEKNSVSWSAIIAGCVQNNLLSLA 265
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 250/468 (53%), Gaps = 40/468 (8%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
+ GL L+ L YS L+ + +F+ + N W++++ +S S +A+
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++RM + ++P+ +T VL+ C+ L+ + +H ++K
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF--------------- 353
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
ER L + TA++ YAK G L +AR F+ ++ RDV W +I
Sbjct: 354 ----------------ERHLFATTALVDMYAKAGCLADARKGFDCLQ--ERDVALWTSLI 395
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y QN E L+L+R+M + P++ T+ +VL +C L LE G+ +H + H G
Sbjct: 396 SGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFG 455
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
+EV +G+AL MY KCGSL+D +F ++DVV+WN+MI G + +G +EAL LF+EM
Sbjct: 456 LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
G++P DVTFV +++AC H G V +GW FN+M + G++PK++H+ CMV+LL RAG+
Sbjct: 516 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
L+E + + D LW LL AC+ H LG E +++ S TYV LS I
Sbjct: 576 LKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGI 635
Query: 460 YAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHP 507
Y A G +V M+ +GV KE GCS IE+ N+ H F+ GD HP
Sbjct: 636 YTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHP 683
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 198/443 (44%), Gaps = 88/443 (19%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH------SDQALSFYARMLAQPVEPNA 117
Y+ G L + ++FN +V W S+I +S S + + M AQ + PNA
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 118 FTFSSVLHG-CNLQAA---RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
+T + + +LQ++ R H V+K + YV T LVG Y + G V KVF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLF--------EGMEAD----------------- 208
M ER+ + + M++ YA GR+ EA +F EG ++D
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 209 -SRDVVCW-------------NVMIDEYAQNGMPNECLLLF------------------- 235
R + C N ++ Y++ NE +F
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 236 ------------RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE-- 281
+M + ++P E T++ VL++C + LE G+ +HS++ K G E
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL--LKLGFERH 356
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ TALVDMY K G L DARK FD + +RDV W S+I GY + +EEAL L+ M
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
G+ P+D T +VL AC + G ++ + +K+G+G+E I + + + G L
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSL 474
Query: 401 EEGYDLVRGMKTDPDSVLWGTLL 423
E+G +LV + D V W ++
Sbjct: 475 EDG-NLVFRRTPNKDVVSWNAMI 496
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE---CLLLFRKMLAE 241
++ YAK G+L +A +F + +DVV WN +I Y+QNG + + LFR+M A+
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIIC--KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 242 KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
+ P+ TL + + L + GR H+ V + ++ V T+LV MYCK G ++D
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK--PSDVTFVAVLTACG 359
K+F + +R+ W++M+ GYA G EEA+++F+ + SD F AVL++
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 360 HSGLVSKGWEIFNL-MKNG 377
+ V G +I + +KNG
Sbjct: 233 ATIYVGLGRQIHCITIKNG 251
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 242 KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
++ P TLL L+ Q L +GR +H + ++ LV+ Y KCG L A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHG---YSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
IF+ I+ +DVV+WNS+I GY+ +G S ++LF EM + P+ T + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA- 127
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFG------CMVNLLGRAGRLEEGYDLVRGMKT 412
S L S + + + + K+ FG +V + +AG +E+G + M
Sbjct: 128 -ESSLQSS-----TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP- 180
Query: 413 DPDSVLWGTLL 423
+ ++ W T++
Sbjct: 181 ERNTYTWSTMV 191
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 251/486 (51%), Gaps = 56/486 (11%)
Query: 24 RLAALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTP 83
R LI + KS GL H KL S+V L +++++ + P P
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 84 NVFLWTSII------HAHSHSDQALSFYARMLAQP---VEPNAFTFSSVLHGCNLQA--- 131
+VFL+ ++I H + + A S Y ++L+ V PN FT+ S+ A
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 132 --ARAIHCHVIKF--AVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
RA+H HV+KF V +V LVG YA
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRFVQAALVGFYA---------------------------N 162
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN---GMPNECLLLFRKMLAEKVR 244
C G+LREAR LFE + D+ WN ++ YA + E LLLF +M +VR
Sbjct: 163 C----GKLREARSLFERIREP--DLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVR 213
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
P+E++L+A++ SC LG G W H YV + + VGT+L+D+Y KCG L ARK+
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD + RDV +N+MI G A+HG+ +E + L+ + G+ P TFV ++AC HSGLV
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
+G +IFN MK YG+EPK+EH+GC+V+LLGR+GRLEE + ++ M P++ LW + L
Sbjct: 334 DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLG 393
Query: 425 ACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
+ + H + GE + +L +SG YVLLSNIYA W K R LMK V K
Sbjct: 394 SSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKS 453
Query: 485 PGCSII 490
PG S +
Sbjct: 454 PGISTL 459
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/485 (34%), Positives = 256/485 (52%), Gaps = 42/485 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFY 105
GLD P + L YSS G + LF+ +V WT++I + + +A+ ++
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFA-VASAPYVSTGLVGAYAR 160
M V N T SVL +++ R++H ++ V ++ + LV Y +
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
A+KVFDEM SR+VV W +I
Sbjct: 253 CSCYDDAQKVFDEMP---------------------------------SRNVVTWTALIA 279
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
Y Q+ ++ +L+F +ML V P+E TL +VLS+C +GAL GR +H Y+ + +
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
GT L+D+Y KCG L++A +F+ + +++V W +MI G+A HGY+ +A LF M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
V P++VTF+AVL+AC H GLV +G +F MK + MEPK +H+ CMV+L GR G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
EE L+ M +P +V+WG L +C LHK+ LG+ A ++ + SG Y LL+N+Y
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHP-KSQDIYLMLEEM 519
+ S NW A+VR MK V K PG S IEV ++ EFIA D + P +S D+Y L+ +
Sbjct: 520 SESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Query: 520 NCRLK 524
+++
Sbjct: 580 GVQMR 584
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 275/548 (50%), Gaps = 53/548 (9%)
Query: 76 LFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
+F +PNV WT++I H M+ + VEPN T S VL C+
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
++ IH ++++ V V LV AYA V A V M R ++ T+++T
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
+ + G+ A L + M + +R D++
Sbjct: 503 FNELGKHEMA---------------------------------LSVINYMYGDGIRMDQL 529
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
+L +S+ LGALE+G+ +H Y V +LVDMY KCGSL+DA+K+F+ I
Sbjct: 530 SLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
DVV+WN ++ G A +G+ AL F+EM +P VTF+ +L+AC + L G
Sbjct: 590 ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL 649
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
E F +MK Y +EP++EH+ +V +LGRAGRLEE +V M P+++++ TLL ACR
Sbjct: 650 EYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRY 709
Query: 429 HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
N+SLGE++A L+ + Y+LL+++Y SG A K R+LM + K+ G S
Sbjct: 710 RGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKS 769
Query: 489 IIEVNNRIHEFIAGDL-RHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELS 547
+EV ++H F++ D+ R K+ IY +E + +K G + G E
Sbjct: 770 TVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYR--------GNENASF- 820
Query: 548 LEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHH 607
HS K A+ +G I P + +VKN +C DCH + +++++ +KI RD N+ H
Sbjct: 821 ---HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHI 877
Query: 608 FENGSCSC 615
F+NG CSC
Sbjct: 878 FKNGECSC 885
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 176/395 (44%), Gaps = 53/395 (13%)
Query: 47 RRGLDPH-PILNFKLQRS----------YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH 95
R GL H P++ F L + Y + ++ LF+ VF WT +I A
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 96 SHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAP 148
+ S + ALS + M+A PN FTFSSV+ C ++ +H VIK
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIK------- 152
Query: 149 YVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD 208
TG G G +++ Y+K G+ +EA LF ++
Sbjct: 153 ---TGFEGNSVVG---------------------SSLSDLYSKCGQFKEACELFSSLQ-- 186
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
+ D + W +MI E L + +M+ V P+E T + +L + LG LE G+
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKT 245
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
IHS + + V + T+LVD Y + ++DA ++ ++ ++DV W S++ G+ +
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
++EA+ F EM +G++P++ T+ A+L+ C + G +I + G E +
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS-QTIKVGFEDSTDVGN 364
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+V++ + E V G P+ V W TL+
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 46/386 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ G + + ++ L YS G + LF+ + WT +I + + +AL
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ 211
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN---LQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
FY+ M+ V PN FTF +L + L+ + IH ++I + + T LV Y++
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ 271
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
+ A +V + E+ DV W ++
Sbjct: 272 FSKMEDAVRVLNSSGEQ---------------------------------DVFLWTSVVS 298
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
+ +N E + F +M + ++P+ T A+LS C + +L+ G+ IHS K G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ--TIKVGF 356
Query: 281 E--VRVGTALVDMYCKCGSLD-DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
E VG ALVDMY KC + + +A ++F +V +VV+W ++I+G HG+ ++ L
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLM 416
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
EM V+P+ VT VL AC V + EI + + ++ ++ +V+ +
Sbjct: 417 EMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASS 475
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLL 423
+++ ++++R MK D++ + +L+
Sbjct: 476 RKVDYAWNVIRSMKRR-DNITYTSLV 500
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 234/380 (61%), Gaps = 5/380 (1%)
Query: 150 VSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS 209
+ ++ + + GD+ SA ++FDEM+ +++++ T M+ Y + AR LF+ M
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP--E 235
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRW 268
R++V WN MI Y QN P E + LF++M A + PD++T+L+VL + GAL G W
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
H +V K +V+V TA++DMY KCG ++ A++IFD + ++ V +WN+MI GYA++G
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGN 355
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
+ AL LF M + KP ++T +AV+TAC H GLV +G + F++M+ G+ KIEH+G
Sbjct: 356 ARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYG 413
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA 448
CMV+LLGRAG L+E DL+ M +P+ ++ + L AC +K++ E I + +
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQ 473
Query: 449 SSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPK 508
+ G YVLL N+YAA W V+++M+ + +KE GCS+IE+N + EFI+GD HP
Sbjct: 474 NDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPH 533
Query: 509 SQDIYLMLEEMNCRLKANGY 528
+ I+L+L ++ + Y
Sbjct: 534 RRSIHLVLGDLLMHMNEEKY 553
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 52/351 (14%)
Query: 63 SYSSVGHLHHSVTLFNRTPT-PNVFLWTSIIHAHSHSDQ---ALSFYARMLAQP-VEPNA 117
S S+VG + ++ LF++ P + FL S+I A+ + Q + + Y + + P+
Sbjct: 20 SASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDN 78
Query: 118 FTFSSVLHGCNLQ----AARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
FTF+++ C+L +H + +F + YVSTG+V YA+ G + A FDE
Sbjct: 79 FTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDE 138
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLL 233
M RS VS TA+++ Y + G L A LF+ M +DVV +N M+D + ++G
Sbjct: 139 MPHRSEVSWTALISGYIRCGELDLASKLFDQM-PHVKDVVIYNAMMDGFVKSGDMTSARR 197
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYC 293
LF DE+T V++ W T ++ YC
Sbjct: 198 LF----------DEMTHKTVIT------------W-----------------TTMIHGYC 218
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM-CGMGVKPSDVTFV 352
+D ARK+FD + +R++V+WN+MI GY + +E +RLF EM + P DVT +
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
+VL A +G +S G E + ++ K++ ++++ + G +E+
Sbjct: 279 SVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKA 328
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 252/463 (54%), Gaps = 39/463 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTF 120
Y+ G L+ + +F++ P+ W II + ++D+A+S +++M + P+A +
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+L L IH ++IK+ + V L+ Y D++ +F++
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR- 433
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
++ D V WN ++ Q+ P E L LF+
Sbjct: 434 -------------------------------NNADSVSWNTILTACLQHEQPVEMLRLFK 462
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
ML + PD IT+ +L C ++ +L+ G +H Y E + L+DMY KCG
Sbjct: 463 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
SL AR+IFD++ +RDVV+W+++I+GYA G+ EEAL LF EM G++P+ VTFV VLT
Sbjct: 523 SLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLT 582
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC H GLV +G +++ M+ +G+ P EH C+V+LL RAGRL E + MK +PD
Sbjct: 583 ACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDV 642
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
V+W TLL AC+ NV L ++ AE IL + +S +VLL +++A+SGNW AA +RS M
Sbjct: 643 VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSM 702
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
K V+K PG S IE+ ++IH F A D+ HP+ DIY +L +
Sbjct: 703 KKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 174/385 (45%), Gaps = 42/385 (10%)
Query: 55 ILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQ 111
ILN + Y G L + +F+ P N+ +TS+I +S + Q A+ Y +ML +
Sbjct: 103 ILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE 162
Query: 112 PVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
+ P+ F F S++ C ++ + +H VIK +S L+ Y R
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR------- 215
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
F++MS+ S V F G+ +D++ W+ +I ++Q G
Sbjct: 216 ---FNQMSDASRV---------------------FYGIPM--KDLISWSSIIAGFSQLGF 249
Query: 228 PNECLLLFRKMLAEKV-RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT 286
E L ++ML+ V P+E + L +C L + G IH + G
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
+L DMY +CG L+ AR++FD I D +WN +I G A +GY++EA+ +F +M G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
++ ++L A +S+G +I + + +G + ++ + L ++L
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 407 VRGMKTDPDSVLWGTLLWACRLHKN 431
+ + DSV W T+L AC H+
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQ 453
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%)
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
T ++++ +C +L GR IH ++ N + + ++ MY KCGSL DAR++FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
+R++V++ S+I GY+ +G EA+RL+ +M + P F +++ AC S V G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 369 EI 370
++
Sbjct: 189 QL 190
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 289/568 (50%), Gaps = 61/568 (10%)
Query: 75 TLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF----SSVLHGC 127
T+F N+ W S+I A + +A+ + RM + V + T SS+
Sbjct: 216 TVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
Query: 128 NL------QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVS 181
+L + +H +K + + V+T L+ KV+ EM E
Sbjct: 276 DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI-------------KVYSEMLED---- 318
Query: 182 VTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE 241
CY LF M + RD+V WN +I +A P + LF ++ E
Sbjct: 319 ---YTDCYK----------LFMEM-SHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQE 363
Query: 242 KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
K+ PD T +VL +C L IH+ V + + +L+ Y KCGSLD
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS 361
++FD++ RDVV+WNSM+ Y++HG + L +F +M + P TF+A+L+AC H+
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHA 480
Query: 362 GLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
G V +G IF M P++ H+ C++++L RA R E ++++ M DPD+V+W
Sbjct: 481 GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 422 LLWACRLHKNVSLG----EEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
LL +CR H N LG +++ E + N S +Y+ +SNIY A G++ A M+
Sbjct: 541 LLGSCRKHGNTRLGKLAADKLKELVEPTN---SMSYIQMSNIYNAEGSFNEANLSIKEME 597
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKT-DLVL 536
V KEP S E+ N++HEF +G P + +Y L+ + LK GY P+
Sbjct: 598 TWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQ 657
Query: 537 HDIGEEQKELSLEVHSEKLALAFGLISTRPGTT-----IKIVKNLRVCLDCHSVMKMMSK 591
EEQ+E +L HSEKLALAF ++ R + I+I+KN R+C+DCH+ MK+ SK
Sbjct: 658 DIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASK 717
Query: 592 ITGRKIITRDRNRFHHFENGSCSCGDYW 619
+ G++I+ RD NRFHHF++ SCSC DYW
Sbjct: 718 LLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 51/383 (13%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y+ G++ ++ +F+ P NV WT++I + + + ++ ML+ PN FT
Sbjct: 106 YAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTL 164
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV 180
SSVL C + + +H +K + + YV+ ++ Y R D +A
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAA------------- 211
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
EA +FE ++ +++V WN MI + + + + +F +M +
Sbjct: 212 ---------------YEAWTVFEAIKF--KNLVTWNSMIAAFQCCNLGKKAIGVFMRMHS 254
Query: 241 EKVRPDEITLLAVLSSCGQLGALESGR------WIHSYVGNHKNGVEVRVGTALVDMYCK 294
+ V D TLL + SS + L +HS + V TAL+ +Y +
Sbjct: 255 DGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE 314
Query: 295 -CGSLDDARKIFDNIVD-RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
D K+F + RD+VAWN +I +A++ E A+ LF ++ + P TF
Sbjct: 315 MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFS 373
Query: 353 AVLTACGHSGLVSKGWEI---FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
+VL AC +GLV+ + ++K G+ + + + +++ + G L+ +
Sbjct: 374 SVLKAC--AGLVTARHALSIHAQVIKGGFLADTVLNN--SLIHAYAKCGSLDLCMRVFDD 429
Query: 410 MKTDPDSVLWGTLLWACRLHKNV 432
M + D V W ++L A LH V
Sbjct: 430 MDSR-DVVSWNSMLKAYSLHGQV 451
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKN--GVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
A+ +C + L G +H ++ +H V + L++MY KCG++ AR++FD +
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
+R+VV+W ++I GY G +E LF M P++ T +VLT+C
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSC 171
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 266/472 (56%), Gaps = 14/472 (2%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEP---NAFTF 120
Y+ G + F+ T ++ W +I+ A + S + F + E ++ T
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 121 SSVLHGC-NLQA---ARAIHCHVIKFAV---ASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
S+L C N+Q + +H + +K + P + L+ AYA+ G+V A K+F
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 174 MSER-SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
+SER +LVS ++L+ Y G +A++LF E + D+ W++M+ YA++ PNE +
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFT--EMSTTDLTTWSLMVRIYAESCCPNEAI 553
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
+FR++ A +RP+ +T++ +L C QL +L R H Y+ G ++R+ L+D+Y
Sbjct: 554 GVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVY 612
Query: 293 CKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
KCGSL A +F + RD+V + +M+ GYA+HG +EAL ++ M +KP V
Sbjct: 613 AKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFIT 672
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
+LTAC H+GL+ G +I++ ++ +GM+P +E + C V+L+ R GRL++ Y V M
Sbjct: 673 TMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPV 732
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
+P++ +WGTLL AC + + LG +A +L +G +VL+SN+YAA W G ++
Sbjct: 733 EPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMEL 792
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
R+LMK ++K GCS +EV+ + + F++GD HP+ I+ ++ + ++K
Sbjct: 793 RNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 174/400 (43%), Gaps = 63/400 (15%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLH-HSVTLFNRTPTPNVFLWTSIIHAHSHSD---QAL 102
+ GL+ ++ L Y+ G + + T F+ +V W +II S ++ A
Sbjct: 150 KAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAF 209
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCN-------LQAARAIHCHVIKFA-VASAPYVSTGL 154
+ ML +P EPN T ++VL C ++ R IH +V++ + + + +V L
Sbjct: 210 RSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL 269
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
V Y R G R+ EA LF M S+D+V
Sbjct: 270 VSFYLRVG-------------------------------RIEEAASLFTRM--GSKDLVS 296
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
WNV+I YA N + LF ++ + V PD +T++++L C QL L SG+ IHSY+
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 274 GNHKNGVE-VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
H +E VG AL+ Y + G A F + +D+++WN+++ +A +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGM---------EPK 383
L L + + VT +++L C + + K E+ +GY + EPK
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV-----HGYSVKAGLLHDEEEPK 471
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ + +++ + G +E + + G+ V + +LL
Sbjct: 472 LGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 150/340 (44%), Gaps = 45/340 (13%)
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM-LAEK 242
++L YAK R+ + + +F M DS D V WN+++ + + E + F+ M A++
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQM--DSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADE 117
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL-DDA 301
+P +T VL C +LG +G+ +HSY+ + VG ALV MY K G + DA
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG-- 359
FD I D+DVV+WN++I G++ + +A R F M +P+ T VL C
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 360 ------------HSGLVSKGW---EIF--NLMKNGYGMEPKIEHFGCMVNLLGRAGRLE- 401
HS +V + W +F N + + Y +IE + +G +
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 402 ----EGY--------------DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFIL 443
GY +LV PDSV ++L C +++ G+EI +IL
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 444 SHNLASSGTYV--LLSNIYAASGNWVGAAKVRSLMKGSGV 481
H+ T V L + YA G+ A SLM +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIF 305
D L V+ +C + L SGR +H V + V ++++MY KC +DD +K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM-CGMGVKPSDVTFVAVLTACGHSGLV 364
+ D V WN ++ G ++ E +R F M KPS VTF VL C G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL-EEGYDLVRGMKTDPDSVLWGTLL 423
G + + + G+E +V++ + G + + Y G+ D D V W ++
Sbjct: 139 YNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI-ADKDVVSWNAII 196
Query: 424 WACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
+N + + F L + Y ++N+
Sbjct: 197 AG--FSENNMMADAFRSFCLMLKEPTEPNYATIANV 230
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 282/566 (49%), Gaps = 83/566 (14%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARML 109
H IL L SY G + + +LF+ P +V WT++I ++ S+ +A + M+
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 110 AQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVS-------------- 151
Q PN FT SSVL C L +H V+K + + YV
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 152 ------------------TGLVGAYARGGDVFSAEKVFDEM-----------------SE 176
T L+ + GD K++ +M +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 177 RSLVSVT----------------------AMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
S+ SVT ++L Y + G L EA+ F ME +D++
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME--DKDLIT 281
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
WN +I E ++ +E LL+F++ ++ P+ T +++++C + AL G+ +H +
Sbjct: 282 WNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEAL 333
V + AL+DMY KCG++ D++++F IVDR ++V+W SM++GY HGY EA+
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
LFD+M G++P + F+AVL+AC H+GLV KG + FN+M++ YG+ P + + C+V+L
Sbjct: 401 ELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDL 460
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEI-AEFILSHNLASSGT 452
LGRAG++ E Y+LV M PD WG +L AC+ HK+ L + A ++ GT
Sbjct: 461 LGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGT 520
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YV+LS IYAA G WV A+VR +M+ G +KE G S I V N++ F D P + +
Sbjct: 521 YVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSV 580
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHD 538
Y +L + + GY P+ D +++D
Sbjct: 581 YSVLGLLIEETREAGYVPELDSLVND 606
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%), Gaps = 78/331 (23%)
Query: 47 RRGLDPH-PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD--QALS 103
+RG + P++N L Y G+L + F+ ++ W ++I SD +AL
Sbjct: 241 KRGFQSNLPVMNSILDL-YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALL 299
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ R +Q PN +TF+S++ C L + +H + + ++ L+ YA
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 160 RGGDVFSAEKVFDEMSE-RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+ G++ +++VF E+ + R+LVS T+M+ Y HG EA
Sbjct: 360 KCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA-------------------- 399
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+ LF KM++ +RPD I +AVLS+C G +E G + N
Sbjct: 400 -------------VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL-------KYFN 439
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+E G ++ R I++ +VD ++G A G EA L +
Sbjct: 440 VMESEYG------------INPDRDIYNCVVD---------LLGRA--GKIGEAYELVER 476
Query: 339 MCGMGVKPSDVTFVAVLTAC---GHSGLVSK 366
M KP + T+ A+L AC H+GL+S+
Sbjct: 477 ---MPFKPDESTWGAILGACKAHKHNGLISR 504
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 253/467 (54%), Gaps = 33/467 (7%)
Query: 75 TLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGCNLQA 131
+F++ + +V ++T++I + H+ +L + ++ + PN T S+L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL------- 448
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK 191
P + L R F +K FD A++ YAK
Sbjct: 449 ----------------PVIGILLALKLGRELHGFIIKKGFDNRCNIG----CAVIDMYAK 488
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLL 251
GR+ A +FE + RD+V WN MI AQ+ P+ + +FR+M + D +++
Sbjct: 489 CGRMNLAYEIFERLS--KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
A LS+C L + G+ IH ++ H +V + L+DMY KCG+L A +F + ++
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
++V+WNS+I HG +++L LF EM G++P +TF+ ++++C H G V +G
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 371 FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHK 430
F M YG++P+ EH+ C+V+L GRAGRL E Y+ V+ M PD+ +WGTLL ACRLHK
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 431 NVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
NV L E + ++ + ++SG YVL+SN +A + W KVRSLMK V+K PG S I
Sbjct: 727 NVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Query: 491 EVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
E+N R H F++GD+ HP+S IY +L + L+ GY P+ L LH
Sbjct: 787 EINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 203/474 (42%), Gaps = 74/474 (15%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
G+D + + L ++Y G + LF+R + +W +++ ++ D + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
+ M + PNA TF VL C AS + G+ G V
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVC-----------------ASKLLIDLGV----QLHGLVV 266
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
+ F+ + SL+S+ Y+K GR +A LF M D V WN MI Y Q+
Sbjct: 267 VSGVDFEGSIKNSLLSM------YSKCGRFDDASKLFRMMS--RADTVTWNCMISGYVQS 318
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
G+ E L F +M++ V PD IT ++L S + LE + IH Y+ H +++ +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
+AL+D Y KC + A+ IF DVV + +MI GY +G ++L +F + + +
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGC-MVNLLGRAGRLEEG 403
P+++T V++L G + G E+ ++K G+ I GC ++++ + GR+
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI---GCAVIDMYAKCGRMNLA 495
Query: 404 YDLVRGMKTDPDSVLWGTLLWACRLHKNV------------------------------- 432
Y++ + + D V W +++ C N
Sbjct: 496 YEIFERL-SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 433 ----SLGEEIAEFILSHNLASS-GTYVLLSNIYAASGNWVGAAKVRSLMKGSGV 481
S G+ I F++ H+LAS + L ++YA GN A V MK +
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 152/346 (43%), Gaps = 30/346 (8%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
+L YA G + +F ++ + WN +I + +NG+ N+ L + KML V
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
PD T ++ +C L + ++ V + V ++L+ Y + G +D K+
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD ++ +D V WN M+ GYA G + ++ F M + P+ VTF VL+ C L+
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 365 SKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
G ++ L + +G E I++ ++++ + GR ++ L R M + D+V W ++
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKLFR-MMSRADTVTWNCMI 312
Query: 424 WACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEK 483
+ L EE F + + SSG +L + S +K +L
Sbjct: 313 SG---YVQSGLMEESLTFF--YEMISSG---VLPDAITFSSLLPSVSKFENL-------- 356
Query: 484 EPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYT 529
E +IH +I +RH S DI+L ++ K G +
Sbjct: 357 -------EYCKQIHCYI---MRHSISLDIFLTSALIDAYFKCRGVS 392
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 148/332 (44%), Gaps = 46/332 (13%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
++G D + + Y+ G ++ + +F R ++ W S+I + SD A+
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC-NLQA---ARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ +M + + + S+ L C NL + +AIH +IK ++AS Y + L+ YA
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ +A VF M E+++VS +++ HG+L+++ LF M S
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS---------- 638
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKN 278
+RPD+IT L ++SSC +G ++ G R+ S ++
Sbjct: 639 ----------------------GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
+ +VD++ + G L +A + ++ D W +++ +H E A
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
++ M + PS+ + VL + H+ ++ WE
Sbjct: 737 KL--MDLDPSNSGYY-VLISNAHAN--AREWE 763
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 257/476 (53%), Gaps = 43/476 (9%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALS 103
++G + +N L Y L + +F + P ++ W S+I A S +
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
RM+ + P+ T +S+L C NL + IH +VI+ V + YV+ L+ Y
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV-CWNVM 218
+ G+ AE VF + +DV WNVM
Sbjct: 356 KCGEANLAETVFSKTQ----------------------------------KDVAESWNVM 381
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I Y G + + ++ +M++ V+PD +T +VL +C QL ALE G+ IH + +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ + +AL+DMY KCG+ +A +IF++I +DVV+W MI Y HG EAL FDE
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M G+KP VT +AVL+ACGH+GL+ +G + F+ M++ YG+EP IEH+ CM+++LGRAG
Sbjct: 502 MQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAG 561
Query: 399 RLEEGYDLVRGM-KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLS 457
RL E Y++++ +T ++ L TL AC LH SLG+ IA ++ + + TY++L
Sbjct: 562 RLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLF 621
Query: 458 NIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIY 513
N+YA+ +W A +VR MK G+ K+PGCS IE+++++ F A D H +++++Y
Sbjct: 622 NLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 84 NVFLWTSIIHAHSHSD---QALSFYARMLAQPV-EPNAFTFSSVLHGCNLQA----ARAI 135
+V++W S++ +S + L + R+L + P++FTF +V+ R I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H V+K V++ LVG YA+ ++ +VFDEM ER
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER------------------ 171
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLS 255
DV WN +I + Q+G + L LF +M + P+ ++L +S
Sbjct: 172 ---------------DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 256 SCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
+C +L LE G+ IH ++ V +ALVDMY KC L+ AR++F + + +VA
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS 361
WNSMI GY G S+ + + + M G +PS T ++L AC S
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 127/249 (51%), Gaps = 6/249 (2%)
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
R +V +++ Y AR +FE + S DV WN ++ Y++N M ++ L +F+
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRS-DVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 237 KMLAEKV-RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
++L + PD T V+ + G LG GR IH+ V +V V ++LV MY K
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKF 155
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
+++ ++FD + +RDV +WN++I + G +E+AL LF M G +P+ V+ +
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 356 TACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
+AC + +G EI +K G+ ++ + +V++ G+ LE ++ + M
Sbjct: 216 SACSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKMPR-K 272
Query: 415 DSVLWGTLL 423
V W +++
Sbjct: 273 SLVAWNSMI 281
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 281/587 (47%), Gaps = 121/587 (20%)
Query: 84 NVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGC-NLQAARA---IH 136
N WTS++ +S + +A+ + + + + N +TF SVL C ++ A R +H
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 137 CHVIKFAVASAPYVSTGLVGAYA-------------------------------RGGDVF 165
C ++K + YV + L+ YA R G +
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 166 SAEKVFDEMSERSL----VSVTAMLTC--------------------------------- 188
A +F M ER + ++ ++L C
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNAL 370
Query: 189 ---YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRP 245
YAK G + A +FEGM +DV+ W ++ NG +E L LF M + P
Sbjct: 371 VDMYAKRGIMDSALKVFEGM--IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNH-KNGV--EVRVGTALVDMYCKCGSLDDAR 302
D+I +VLS+ +L LE G+ +H GN+ K+G + V +LV MY KCGSL+DA
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVH---GNYIKSGFPSSLSVNNSLVTMYTKCGSLEDAN 485
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
IF+++ RD++ W +I+GYA +G E+A R
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRY--------------------------- 518
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
F+ M+ YG+ P EH+ CM++L GR+G + L+ M+ +PD+ +W +
Sbjct: 519 --------FDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAI 570
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
L A R H N+ GE A+ ++ ++ YV LSN+Y+A+G AA VR LMK +
Sbjct: 571 LAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
Query: 483 KEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEE 542
KEPGCS +E ++H F++ D RHP+ +IY ++EM +K GY LHD+ +E
Sbjct: 631 KEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKE 690
Query: 543 QKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMM 589
KEL L HSEKLA+AFGL+ G I+I+KNLRVC DCHS MK++
Sbjct: 691 GKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 193/465 (41%), Gaps = 76/465 (16%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFT 119
+YS+ L + LF P N W ++I + S +A + + M + ++PN +T
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
SVL C L IH H IK TG
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIK----------TGF--------------------- 156
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+ + V +L YA+ R+ EA LFE ME + +V W M+ Y+QNG + + F
Sbjct: 157 DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT-WTSMLTGYSQNGFAFKAIECF 215
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
R + E + ++ T +VL++C + A G +H + + V +AL+DMY KC
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
++ AR + + + DVV+WNSMI+G G EAL +F M +K D T ++L
Sbjct: 276 REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 356 T------------ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
+ H +V G+ + L+ N +V++ + G ++
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA------------LVDMYAKRGIMDSA 383
Query: 404 YDLVRGMKTDPDSVLWGTLLW----------ACRLHKNVSLGEEIAEFILSHN-LASSGT 452
+ GM + D + W L+ A +L N+ +G + I++ + L++S
Sbjct: 384 LKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 453 YVLLSNIYAASGNWVGAAKVRSL-MKGSGVEKEPGCSIIEVNNRI 496
LL GN++ + SL + S V C +E N I
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 7/278 (2%)
Query: 151 STGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSR 210
S L+G ++ G V A ++FD+M ER + M+ Y+ RL +A LF +
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPV--K 88
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
+ + WN +I Y ++G E LF +M ++ ++P+E TL +VL C L L G IH
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV-DRDVVAWNSMIMGYAIHGYS 329
+ ++V V L+ MY +C + +A +F+ + +++ V W SM+ GY+ +G++
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFG 388
+A+ F ++ G + + TF +VLTAC G ++ ++K+G+ ++
Sbjct: 209 FKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--S 266
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
++++ + +E L+ GM+ D D V W +++ C
Sbjct: 267 ALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 268/487 (55%), Gaps = 20/487 (4%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPN 116
L + Y +G+ + +F R P P+V + +I ++ S +AL Y +M++ +EP+
Sbjct: 172 LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFA--VASAPYVSTGLVGAYARGGDVFSAEKV 170
+T S+L C +++ + +H + + +S +S L+ Y + + A++
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
FD M ++ + S M+ + + G + A+ +F+ M RD+V WN ++ Y++ G
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--KRDLVSWNSLLFGYSKKGCDQR 349
Query: 231 CL--LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
+ L + + EKV+PD +T+++++S G L GRW+H V + + + +AL
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+DMYCKCG ++ A +F ++DV W SMI G A HG ++AL+LF M GV P++
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV- 407
VT +AVLTAC HSGLV +G +FN MK+ +G +P+ EH+G +V+LL RAGR+EE D+V
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWV 467
+ M P +WG++L ACR +++ E +L G YVLLSNIYA G W
Sbjct: 530 KKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWG 589
Query: 468 GAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLR-HPKSQDIYLMLEEMNCRLKAN 526
+ K R M+ GV+K G S + +H F+A + + HP+ +I +L+ + +K
Sbjct: 590 YSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK-- 647
Query: 527 GYTPKTD 533
PK D
Sbjct: 648 ---PKLD 651
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 175/396 (44%), Gaps = 77/396 (19%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS-DQALSFYARMLAQPVEPNAFTFSSVLHGCN-LQAAR 133
N TP PNVF++ ++I A S S ++ Y+ M+ V P+ TF ++ + L +
Sbjct: 91 FLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK 150
Query: 134 AIHCHVIKFAVAS-APYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
IHCH+I S Y+ LV Y G+ AEKVF M + S M+ YAK
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLA 252
G EA L L+ KM+++ + PDE T+L+
Sbjct: 211 GFSLEA---------------------------------LKLYFKMVSDGIEPDEYTVLS 237
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKN--GVEVRVGTALVDMYCKC--------------- 295
+L CG L + G+ +H ++ + + AL+DMY KC
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 296 ----------------GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR-LFDE 338
G ++ A+ +FD + RD+V+WNS++ GY+ G + +R LF E
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 339 MCGM-GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHF--GCMVNLLG 395
M + VKP VT V++++ ++G +S G + L+ ++ K + F ++++
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR---LQLKGDAFLSSALIDMYC 414
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKN 431
+ G +E + +V T+ D LW +++ H N
Sbjct: 415 KCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGN 449
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 198 ARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSC 257
A+LLF + +V +N MI A + NEC L+ M+ +V PD T L ++ +
Sbjct: 87 AKLLFLNFTPNP-NVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKAS 143
Query: 258 GQLGALESGRWIHSYV--------GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
L ++ IH ++ GN+ + +LV Y + G+ A K+F +
Sbjct: 144 SFLSEVKQ---IHCHIIVSGCLSLGNY-------LWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH 360
DV ++N MI+GYA G+S EAL+L+ +M G++P + T +++L CGH
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 260/463 (56%), Gaps = 13/463 (2%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFS 121
SS G + ++ ++ P + W +I S+S ++++S Y +ML + P+ T+
Sbjct: 53 SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYP 112
Query: 122 SVLHGCNLQAAR----AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
++ + + R ++HC V+K + ++ L+ Y D SA K+FDEM +
Sbjct: 113 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 172
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
+LV+ ++L YAK G + ARL+F+ E RDVV W+ MID Y + G N+ L +F +
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFD--EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 238 ML-AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M+ + +E+T+++V+ +C LGAL G+ +H Y+ + + V + T+L+DMY KCG
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 297 SLDDARKIF--DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
S+ DA +F ++ + D + WN++I G A HG+ E+L+LF +M + P ++TF+ +
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L AC H GLV + W F +K G EPK EH+ CMV++L RAG +++ +D + M P
Sbjct: 351 LAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
+ G LL C H N+ L E + + ++ + G YV L+N+YA + + A +R
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLE 517
M+ GV+K G SI++++ H FIA D H S IY +L+
Sbjct: 470 AMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 241/484 (49%), Gaps = 69/484 (14%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPV-EPNAFTFSSVLHGCN--- 128
+F R P+P +LW +I +S+ + +S RM+ + P+ +TF V+ C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 129 -LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
++ ++H V++ V T V Y + D+FSA KVF EM ER+ VS TA++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 188 CYAKHGRLREARLLFEGM-----------------------------EADSRDVVCWNVM 218
Y K G L EA+ +F+ M E RD++ + M
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 219 IDEY-------------------------------AQNGMPNECLLLFRKMLAEKVRPDE 247
ID Y AQNG PNE +F +M A+ V+PDE
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR-VGTALVDMYCKCGSLDDARKIFD 306
++ ++S+C Q+G E + SY+ N V AL+DM KCG +D A K+F+
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
+ RD+V++ SM+ G AIHG EA+RLF++M G+ P +V F +L CG S LV +
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
G F LM+ Y + +H+ C+VNLL R G+L+E Y+L++ M + + WG+LL C
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 427 RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPG 486
LH N + E +A + S+G+YVLLSNIYAA W A +R M +G+ K G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 487 CSII 490
S I
Sbjct: 545 RSWI 548
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 49/282 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTF 120
Y+ G + + LF +V W+++I ++ + Q A ++ M A+ V+P+ F
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 121 SSVLHGCNL--------QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
++ C+ + +H + KF S+ YV L+ A+ G + A K+F+
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNKF---SSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
EM +R LVS +M+ A HG +E +
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHG---------------------------------CGSEAI 391
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDM 291
LF KM+ E + PDE+ +L CGQ +E G R+ + + +V++
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 292 YCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEA 332
+ G L +A ++ ++ + AW S++ G ++HG +E A
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 247/436 (56%), Gaps = 15/436 (3%)
Query: 66 SVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSS 122
S+ + ++ +F+ PNV ++ ++I +S ++LSF++ M ++ + + +T++
Sbjct: 48 SLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAP 107
Query: 123 VLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
+L C +L+ + +H +I+ + G+V Y GG + A+KVFDEMSER+
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
+V M+ + G + LF+ M R +V WN MI ++ G E L LF +M
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQM--SERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNHKNGVEVRVGTALVDMYCKC 295
+ + PDE T++ VL LG L++G+WIHS G K+ + V G ALVD YCK
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV--GNALVDFYCKS 283
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAV 354
G L+ A IF + R+VV+WN++I G A++G E + LFD M G V P++ TF+ V
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L C ++G V +G E+F LM + +E + EH+G MV+L+ R+GR+ E + ++ M +
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
++ +WG+LL ACR H +V L E A ++ +SG YVLLSN+YA G W KVR+
Sbjct: 404 NAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRT 463
Query: 475 LMKGSGVEKEPGCSII 490
LMK + + K G S I
Sbjct: 464 LMKKNRLRKSTGQSTI 479
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 249/489 (50%), Gaps = 42/489 (8%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
RRG L L Y+ +V LF +V W+++I + + +AL
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M+ EPN T VL C +L+ R H I+ + + VST LV Y
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ FS E+ YA R+ +DVV W +I
Sbjct: 311 K---CFSPEE------------------AYAVFSRI------------PRKDVVSWVALI 337
Query: 220 DEYAQNGMPNECLLLFRKMLAEK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+ NGM + + F ML E RPD I ++ VL SC +LG LE + HSYV +
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+G +LV++Y +CGSL +A K+F+ I +D V W S+I GY IHG +AL F+
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 339 MCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
M VKP++VTF+++L+AC H+GL+ +G IF LM N Y + P +EH+ +V+LLGR
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLS 457
G L+ ++ + M P + GTLL ACR+H+N + E +A+ + +G Y+L+S
Sbjct: 518 GDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577
Query: 458 NIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLE 517
N+Y G W K+R+ +K G++K S+IE+ ++H F+A D HP+ + +Y +L+
Sbjct: 578 NVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLK 637
Query: 518 EMNCRLKAN 526
E++ +K +
Sbjct: 638 ELDLHMKED 646
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 51/384 (13%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGC----N 128
+F +++ W +++ + S Q L ++ M +P+ FT L C
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 129 LQAARAIHCHVIK-FAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
+ IH V K + S YV + L+
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLI-------------------------------Y 104
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM-LAEKVRPD 246
Y K GR+ EA +F+ +E D+V W+ M+ + +NG P + + FR+M +A V PD
Sbjct: 105 MYIKCGRMIEALRMFDELEKP--DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
+TL+ ++S+C +L GR +H +V ++ + +L++ Y K + +A +F
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
I ++DV++W+++I Y +G + EAL +F++M G +P+ T + VL AC + + +
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
G + L G+E +++ +V++ + EE Y + + D V W L+
Sbjct: 283 GRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGF 340
Query: 427 RL----HKNVSLGEEIAEFILSHN 446
L H+++ EE + +L +N
Sbjct: 341 TLNGMAHRSI---EEFSIMLLENN 361
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 7/235 (2%)
Query: 197 EARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSS 256
+AR +F E R + WN ++ ++ E L F M ++ +PD TL L +
Sbjct: 12 DARQMFG--EMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 257 CGQLGALESGRWIHSYVGNHKN-GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
CG+L + G IH +V G ++ VG++L+ MY KCG + +A ++FD + D+V
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM 374
W+SM+ G+ +G +A+ F M V P VT + +++AC G + +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 375 KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
G + ++N ++ +E +L + M + D + W T++ AC +
Sbjct: 190 IR-RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 249/479 (51%), Gaps = 40/479 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS--DQALSFYA 106
GLD L YS G + + +F+ P +V ++I +S + ++A+ +
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQ 618
Query: 107 RMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVAS-APYVSTGLVGAYARG 161
ML + V P+ TF++++ C +L H + K +S Y+ L+G Y
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
+ A +F E+S + +V W M+
Sbjct: 679 RGMTEACALFSELSS--------------------------------PKSIVLWTGMMSG 706
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
++QNG E L +++M + V PD+ T + VL C L +L GR IHS + + + ++
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
L+DMY KCG + + ++FD + R +VV+WNS+I GYA +GY+E+AL++FD M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
+ P ++TF+ VLTAC H+G VS G +IF +M YG+E +++H CMV+LLGR G L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
+E D + PD+ LW +LL ACR+H + GE AE ++ +S YVLLSNIY
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
A+ G W A +R +M+ GV+K PG S I+V R H F AGD H + I + LE++
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 43/415 (10%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFY 105
G+D L + Y+ + ++ F+ +V W S++ +S + L +
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSF 148
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
+ + PN FTFS VL C N++ R IHC +IK + Y LV YA+
Sbjct: 149 VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC 208
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGM---------------- 205
+ A +VF+ + + + V T + + Y K G EA L+FE M
Sbjct: 209 DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268
Query: 206 -----------------EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
E S DVV WNVMI + + G + F M V+
Sbjct: 269 NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
TL +VLS+ G + L+ G +H+ + VG++LV MY KC ++ A K+F+ +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW 368
+++ V WN+MI GYA +G S + + LF +M G D TF ++L+ C S + G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 369 EIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ +++ + + +V++ + G LE+ + M D D+V W T++
Sbjct: 449 QFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTII 501
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 180/435 (41%), Gaps = 74/435 (17%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFT 119
+Y +G L + LF +P+V W +I H A+ ++ M V+ T
Sbjct: 270 TYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 120 FSSVLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
SVL NL +H IK +AS YV + LV Y++ + +A KV
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV----- 384
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
FE +E ++ V WN MI YA NG ++ + LF
Sbjct: 385 --------------------------FEALE--EKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
M + D+ T ++LS+C LE G HS + K + VG ALVDMY KC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G+L+DAR+IF+ + DRD V WN++I Y EA LF M G+ + L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG----------------- 398
AC H + +G ++ + + G++ + ++++ + G
Sbjct: 537 KACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 399 -------------RLEEGYDLVRGMKT---DPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
LEE L + M T +P + + T++ AC ++++LG + I
Sbjct: 596 VSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 443 LSHNLASSGTYVLLS 457
+S G Y+ +S
Sbjct: 656 TKRGFSSEGEYLGIS 670
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 203/475 (42%), Gaps = 79/475 (16%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
+ GL + + L YS + + +F N W ++I ++H S + +
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M + + FTF+S+L C +L+ H +IK +A +V LV YA
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + A ++F+ M +R D V WN +I
Sbjct: 475 KCGALEDARQIFERMCDR---------------------------------DNVTWNTII 501
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y Q+ +E LF++M + D L + L +C + L G+ +H
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
++ G++L+DMY KCG + DARK+F ++ + VV+ N++I GY+ + EEA+ LF EM
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEM 620
Query: 340 CGMGVKPSDVTFVAVLTACG-----------HSGLVSKGW---------EIFNLMKNGYG 379
GV PS++TF ++ AC H + +G+ + + N G
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG 680
Query: 380 M-----------EPK-IEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLW 424
M PK I + M++ + G EE + M+ D PD + T+L
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 425 ACRLHKNVSLGEEIAEFI--LSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
C + ++ G I I L+H+L + L+ ++YA G+ G+++V M+
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI-DMYAKCGDMKGSSQVFDEMR 794
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 164 VFSAEKVFDEMSERSLVSV----------------------TAMLTCYAKHGRLREARLL 201
+F + KVFDEM +R +++ A++ YAK ++ A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 202 FEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG 261
F+ +E +DV WN M+ Y+ G P + L F + ++ P++ T VLS+C +
Sbjct: 118 FDFLE---KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 262 ALESGRWIHSYVGNHKNGVEVR--VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSM 319
+E GR IH + K G+E G ALVDMY KC + DAR++F+ IVD + V W +
Sbjct: 175 NVEFGRQIHCSM--IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 320 IMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYG 379
GY G EEA+ +F+ M G +P + FV V+ G + +F M +
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS--- 289
Query: 380 MEPKIEHFGCMVNLLGRAG----RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLG 435
P + + M++ G+ G +E +++ + S L G++L A + N+ LG
Sbjct: 290 --PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL-GSVLSAIGIVANLDLG 346
Query: 436 EEIAEFILSHNLASSGTYV--LLSNIYAASGNWVGAAKV 472
+ + LAS+ YV L ++Y+ AAKV
Sbjct: 347 LVVHAEAIKLGLASN-IYVGSSLVSMYSKCEKMEAAAKV 384
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 250/435 (57%), Gaps = 16/435 (3%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTF 120
Y++ G ++ S LF+R V LW S+I A++ +AL + M + E ++ T
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTL 321
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++V++ C L+ + +HCH KF + V++ L+ Y++ G A K+F E+
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ + +M+ Y GR+ +A+ +FE +E ++ ++ WN M + ++QNG E L F
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIE--NKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH---SYVGNHKNGVEVRVGTALVDMYC 293
+M + DE++L +V+S+C + +LE G + + VG + V V ++L+D+YC
Sbjct: 440 QMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV---VSSSLIDLYC 496
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
KCG ++ R++FD +V D V WNSMI GYA +G EA+ LF +M G++P+ +TF+
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
VLTAC + GLV +G ++F MK +G P EHF CMV+LL RAG +EE +LV M D
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 414 PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVR 473
D +W ++L C + ++G++ AE I+ +S YV LS I+A SG+W +A VR
Sbjct: 617 VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVR 676
Query: 474 SLMKGSGVEKEPGCS 488
LM+ + V K PG S
Sbjct: 677 KLMRENNVTKNPGSS 691
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 193/398 (48%), Gaps = 46/398 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTF 120
++ G L + LFN P +V S++H + ++++AL + + +A T
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITL 190
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++VL C L+ + IH ++ V +++ LV YA+ GD+ A + +++ E
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
S++A+++ YA GR+ E+R LF+ +R V+ WN MI Y N M E L+LF
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFD--RKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M E R D TL AV+++C LG LE+G+ +H + ++ V + L+DMY KCG
Sbjct: 309 EMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 297 S-------------------------------LDDARKIFDNIVDRDVVAWNSMIMGYAI 325
S +DDA+++F+ I ++ +++WNSM G++
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE 385
+G + E L F +M + + +V+ +V++AC + G ++F G++
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQV 486
Query: 386 HFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+++L + G +E G + M D V W +++
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMI 523
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 37/248 (14%)
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
++ Y G+ ++ + FD M ER S +++ +AK G L AR LF M +DVV
Sbjct: 99 MIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP--EKDVV 156
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
N ++ Y NG E L LF+++ D ITL VL +C +L AL+ G+ IH+ +
Sbjct: 157 TLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQI 213
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSL-------------------------------DDAR 302
+ ++ ++LV++Y KCG L +++R
Sbjct: 214 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESR 273
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
+FD +R V+ WNSMI GY + EAL LF+EM + T AV+ AC G
Sbjct: 274 GLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLG 332
Query: 363 LVSKGWEI 370
+ G ++
Sbjct: 333 FLETGKQM 340
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 42/283 (14%)
Query: 55 ILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQ 111
IL + + Y S G + + +F R ++ W S+ + S + + L ++ +M
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 112 PVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
+ + + SSV+ C +L+ + + S VS+ L+ Y + G V
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
+VFD M + V +M++ YA +G +G EA ID
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNG---------QGFEA-----------ID------- 537
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI-HSYVGNHKNGVEVRVGT 286
LF+KM +RP +IT + VL++C G +E GR + S +H + +
Sbjct: 538 ------LFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 287 ALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGY 328
+VD+ + G +++A + + + D D W+S++ G +GY
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
+L Y++ G++ AR LF+ E R+ WN MI+ Y +G L F M+ E+
Sbjct: 68 LLQMYSRSGKMGIARNLFD--EMPDRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPER-- 122
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
+ W +V + K G L AR++
Sbjct: 123 -------------------DGYSW-----------------NVVVSGFAKAGELSVARRL 146
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
F+ + ++DVV NS++ GY ++GY+EEALRLF E + +T VL AC +
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE---LNFSADAITLTTVLKACAELEAL 203
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
G +I + G G+E + +VN+ + G L ++ ++ +PD
Sbjct: 204 KCGKQIHAQILIG-GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPD 252
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
V V L+ MY + G + AR +FD + DR+ +WN+MI GY G +LR FD M
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-- 119
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
+ ++ V++ +G +S +FN M E + +++ G E
Sbjct: 120 --PERDGYSWNVVVSGFAKAGELSVARRLFNAMP-----EKDVVTLNSLLHGYILNGYAE 172
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEI-AEFILSHNLASSGTYVLLSNIY 460
E L + + D++ T+L AC + + G++I A+ ++ S L N+Y
Sbjct: 173 EALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232
Query: 461 AASGN 465
A G+
Sbjct: 233 AKCGD 237
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 244/480 (50%), Gaps = 46/480 (9%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSF 104
RG + L Y+ G + + LF +V WTS+I A+ Q A+
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 105 YARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
+ +M V PN TF+S+ C L +HC+V+ + + VS ++ Y+
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS- 356
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
TC G L A +LF+GM RD++ W+ +I
Sbjct: 357 --------------------------TC----GNLVSASVLFQGMRC--RDIISWSTIIG 384
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNHK 277
Y Q G E F M +P + L ++LS G + +E GR +H+ G +
Sbjct: 385 GYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
N V ++L++MY KCGS+ +A IF D+V+ +MI GYA HG S+EA+ LF+
Sbjct: 445 NST---VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
+ +G +P VTF++VLTAC HSG + G+ FN+M+ Y M P EH+GCMV+LL RA
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLS 457
GRL + ++ M D V+W TLL AC+ ++ G AE IL + + V L+
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLA 621
Query: 458 NIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLE 517
NIY+++GN AA VR MK GV KEPG S I++ + + F++GD HP+S+DIY +LE
Sbjct: 622 NIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 199/448 (44%), Gaps = 58/448 (12%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYA 106
DP+ L RS + G+L + +F++ P ++ WTSII + ++SD+AL ++
Sbjct: 41 FDPNSHL-----RSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFS 95
Query: 107 --RMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
R++ V P+ S VL C N+ ++H + +K ++ S+ YV + L+ Y R
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
G + + +VF EM R+ V+ TA++T GR +E
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEG---------------------- 193
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
L F +M + D T L +C L ++ G+ IH++V
Sbjct: 194 -----------LTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT 242
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ V +L MY +CG + D +F+N+ +RDVV+W S+I+ Y G +A+ F +M
Sbjct: 243 TLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR 302
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
V P++ TF ++ +AC + G ++ N++ G+ + M+ + G
Sbjct: 303 NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL--SLGLNDSLSVSNSMMKMYSTCGN 360
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE-IAEFILSHNLASSGTYVLLSN 458
L L +GM+ D + W T++ + GEE F + T L++
Sbjct: 361 LVSASVLFQGMRC-RDIISWSTIIGG---YCQAGFGEEGFKYFSWMRQSGTKPTDFALAS 416
Query: 459 IYAASGNWV---GAAKVRSLMKGSGVEK 483
+ + SGN G +V +L G+E+
Sbjct: 417 LLSVSGNMAVIEGGRQVHALALCFGLEQ 444
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 250/460 (54%), Gaps = 13/460 (2%)
Query: 83 PNVFLWTSIIHAHSHS---DQALSFY--ARMLAQPV--EPNAFTFSSVLHGCNLQAARAI 135
P+ WTS++ HS + L ++ RM V E A FS L A +
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H +VIK L+ Y + G V AE +F ++ + + S +++T + G+L
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 196 REARLLFEGMEADSR------DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
EA LF +E + +VV W +I G ++ L FR+M KV + +T
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
+ +LS C +L AL GR IH +V + V ALV+MY KCG L + +F+ I
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
D+D+++WNS+I GY +HG++E+AL +FD M G P + VAVL+AC H+GLV KG E
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 370 IFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
IF M +G+EP+ EH+ C+V+LLGR G L+E ++V+ M +P + G LL +CR+H
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMH 616
Query: 430 KNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSI 489
KNV + E IA + +G+Y+LLSNIY+A G W +A VR+L K ++K G S
Sbjct: 617 KNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSW 676
Query: 490 IEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYT 529
IEV + ++F +G + + + IY +LE++ + G T
Sbjct: 677 IEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPT 716
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGME-ADSRDVVCWNVMIDEYAQN 225
A+ + + RS +++ YA+ G L +AR +FE + D+ WN ++ +
Sbjct: 77 AQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSH 136
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
G+ L L+R M + D L +L +C LG R H+ V + V
Sbjct: 137 GLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVV 196
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
L+ +Y K G + DA +F + R+ ++WN MI G++ E A+++F+ M K
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFNLMK 375
P +VT+ +VL+ G + F+LM+
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 256/473 (54%), Gaps = 48/473 (10%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS------HSDQALSFYARMLAQPVEPNA 117
Y+ L + +F+ +V L+ ++I +S +AL+ + M + + P+
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 118 FTFSSVLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
TF S+L +L ++ IH GL+ Y D+F+ + D
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIH----------------GLMFKYGLNLDIFAGSALIDV 498
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLL 233
S CY L+++RL+F+ M+ +D+V WN M Y Q E L
Sbjct: 499 YS-----------NCYC----LKDSRLVFDEMKV--KDLVIWNSMFAGYVQQSENEEALN 541
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDM 291
LF ++ + RPDE T ++++ G L +++ G+ H + K G+E + AL+DM
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL--LKRGLECNPYITNALLDM 599
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
Y KCGS +DA K FD+ RDVV WNS+I YA HG ++AL++ ++M G++P+ +TF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
V VL+AC H+GLV G + F LM +G+EP+ EH+ CMV+LLGRAGRL + +L+ M
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 412 TDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAK 471
T P +++W +LL C NV L E AE + + SG++ +LSNIYA+ G W A K
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 472 VRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
VR MK GV KEPG S I +N +H F++ D H K+ IY +L+++ +++
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 45/387 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALS 103
+ G D + L Y G++ ++ +F+ P + WT++I S +L
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ +++ V P+ + S+VL C+ L+ + IH H++++ +
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL--------------- 280
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
EM + SL++V ++ Y K GR+ A LF GM +++++ W ++
Sbjct: 281 -------------EM-DASLMNV--LIDSYVKCGRVIAAHKLFNGMP--NKNIISWTTLL 322
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y QN + E + LF M ++PD ++L+SC L AL G +H+Y G
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS---EEALRLF 336
+ V +L+DMY KC L DARK+FD DVV +N+MI GY+ G EAL +F
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR 396
+M ++PS +TFV++L A + +I LM YG+ I ++++
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSN 501
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLL 423
L++ + MK D V+W ++
Sbjct: 502 CYCLKDSRLVFDEMKV-KDLVIWNSMF 527
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 82/326 (25%)
Query: 105 YARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
+AR+L + + +V+HG +I + + Y+S L+ Y+R G +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHG-----------QIIVWGLELDTYLSNILINLYSRAGGM 95
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLF---------------------- 202
A KVF++M ER+LVS + M++ HG E+ ++F
Sbjct: 96 VYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA 155
Query: 203 -EGMEAD-----------------SRDVVCWNVMIDEYAQNG-----------MPNE--- 230
G++ RDV ++ID Y ++G +P +
Sbjct: 156 CSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV 215
Query: 231 -----------------CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
L LF +++ + V PD L VLS+C L LE G+ IH+++
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+ ++ + L+D Y KCG + A K+F+ + ++++++W +++ GY + +EA+
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACG 359
LF M G+KP ++LT+C
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCA 361
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 257/482 (53%), Gaps = 52/482 (10%)
Query: 47 RRGLDP-HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QAL 102
RR LDP + L+ L Y+ G L T+ N+ W S+I ++H QAL
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ +M+ Q ++P+AFT +S + C + + IH HVI+ V S +V L+ Y
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMY 449
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
++ G V SA VF+++ RS VV WN M
Sbjct: 450 SKSGSVDSASTVFNQIKHRS---------------------------------VVTWNSM 476
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK- 277
+ ++QNG E + LF M + +E+T LAV+ +C +G+LE G+W+H HK
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH-----HKL 531
Query: 278 --NGV-EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
+G+ ++ TAL+DMY KCG L+ A +F + R +V+W+SMI Y +HG A+
Sbjct: 532 IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIS 591
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL 394
F++M G KP++V F+ VL+ACGHSG V +G FNLMK+ +G+ P EHF C ++LL
Sbjct: 592 TFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLL 650
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV 454
R+G L+E Y ++ M D+ +WG+L+ CR+H+ + + + I + +G Y
Sbjct: 651 SRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYT 710
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYL 514
LLSNIYA G W ++RS MK S ++K PG S IE++ ++ F AG+ ++ +IY
Sbjct: 711 LLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYR 770
Query: 515 ML 516
L
Sbjct: 771 FL 772
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 184/384 (47%), Gaps = 50/384 (13%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYAR 107
DP P+ KL SY+ +G S +F P P+ F++ +I + D A+ Y R
Sbjct: 33 DPLPVT--KLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR 90
Query: 108 MLAQPVEPNAFTFSSVLHGC-----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
++++ + + F F SVL C +L +H +IK V + T L
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSL-------- 142
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
L Y + G L +A +F+GM RD+V W+ ++
Sbjct: 143 -----------------------LCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSC 177
Query: 223 AQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
+NG + L +F+ M+ + V PD +T+++V+ C +LG L R +H + ++
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
+ +L+ MY KCG L + +IF+ I ++ V+W +MI Y +SE+ALR F EM
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEI--FNLMKNGYGMEPKIEHFG-CMVNLLGRAGR 399
G++P+ VT +VL++CG GL+ +G + F + + ++P E +V L G+
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYAECGK 354
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLL 423
L + ++R + +D + V W +L+
Sbjct: 355 LSDCETVLR-VVSDRNIVAWNSLI 377
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 204/438 (46%), Gaps = 60/438 (13%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFY 105
G+D ++ L Y G+L + +F+ P ++ W++++ + + +AL +
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF 190
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M+ VEP+A T SV+ GC L+ AR++H + +
Sbjct: 191 KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR-------------------- 230
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
K+FD + +L + ++LT Y+K G L + +FE + ++ V W MI
Sbjct: 231 -------KMFD--LDETLCN--SLLTMYSKCGDLLSSERIFEKIA--KKNAVSWTAMISS 277
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKNGV 280
Y + + L F +M+ + P+ +TL +VLSSCG +G + G+ +H + V +
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN 337
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ ALV++Y +CG L D + + DR++VAWNS+I YA G +AL LF +M
Sbjct: 338 YESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV 397
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKI-EHF--GCMVNLLGRA 397
+KP T + ++AC ++GLV G +I +G+ + + + F ++++ ++
Sbjct: 398 TQRIKPDAFTLASSISACENAGLVPLGKQI-----HGHVIRTDVSDEFVQNSLIDMYSKS 452
Query: 398 GRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEF-ILSHNLASSGTYVLL 456
G ++ + +K V W ++L C +N + E I+ F + H+ L
Sbjct: 453 GSVDSASTVFNQIK-HRSVVTWNSML--CGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 457 SNIYAAS-------GNWV 467
+ I A S G WV
Sbjct: 510 AVIQACSSIGSLEKGKWV 527
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 239/417 (57%), Gaps = 8/417 (1%)
Query: 107 RMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFS 166
++ + VE N ++S+++G L + + ++ Y G++
Sbjct: 49 KVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLE 108
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
A +FD+M R ++S +L YA G + +F+ M R+V WN +I YAQNG
Sbjct: 109 ARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP--ERNVFSWNGLIKGYAQNG 166
Query: 227 MPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSY---VGNHKNGVEV 282
+E L F++M+ E V P++ T+ VLS+C +LGA + G+W+H Y +G +K V+V
Sbjct: 167 RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK--VDV 224
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
V AL+DMY KCG+++ A ++F I RD+++WN+MI G A HG+ EAL LF EM
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
G+ P VTFV VL AC H GLV G FN M + + P+IEH GC+V+LL RAG L +
Sbjct: 285 GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQ 344
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
+ + M D+V+W TLL A +++K V +GE E ++ + +V+LSNIY
Sbjct: 345 AVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGD 404
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
+G + AA+++ M+ +G +KE G S IE ++ + +F + +HP+++++ +L E+
Sbjct: 405 AGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 46/269 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQ-PVEPNAFT 119
Y+++G + +F+ P NVF W +I ++ + + L + RM+ + V PN T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 120 FSSVLHGCNLQAARAIHCHVIKFAVASAPY------VSTGLVGAYARGGDVFSAEKVFDE 173
+ VL C A V K+ + Y V L+ Y + G + A +VF
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYG-ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLL 233
+ R L+S M+ A HG EA L
Sbjct: 250 IKRRDLISWNTMINGLAAHGHGTEA---------------------------------LN 276
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHKNGVEVRVGTALVDMY 292
LF +M + PD++T + VL +C +G +E G + +S + E+ +VD+
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLL 336
Query: 293 CKCGSLDDARKIFDNI-VDRDVVAWNSMI 320
+ G L A + + + V D V W +++
Sbjct: 337 SRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 249/466 (53%), Gaps = 52/466 (11%)
Query: 69 HLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVE---PNAFTFS- 121
H H++ ++F+ PN F++ ++I S S Q L ++ M+ + E P+ TF
Sbjct: 62 HFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 122 ---SVLHGCNLQAARAIHCHVIKFAV-ASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
+ L C + IHC V+K V S +V TG++ Y +F A KVFDE+ +
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
DVV W+V+++ Y + G+ +E L +F++
Sbjct: 182 ---------------------------------DVVKWDVLMNGYVRCGLGSEGLEVFKE 208
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCKC 295
ML + PDE ++ L++C Q+GAL G+WIH +V K +E V VGTALVDMY KC
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV-KKKRWIESDVFVGTALVDMYAKC 267
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFVAV 354
G ++ A ++F+ + R+V +W ++I GYA +GY+++A D + G+KP V + V
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGV 327
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L AC H G + +G + M+ YG+ PK EH+ C+V+L+ RAGRL++ DL+ M P
Sbjct: 328 LAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS----SGTYVLLSNIYAASGNWVGAA 470
+ +WG LL CR HKNV LGE + +L + V LSNIY + A
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAF 447
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
KVR +++ G+ K PG S++EV+ + +F++GD+ HP I+ ++
Sbjct: 448 KVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 15/257 (5%)
Query: 177 RSLVSVTAMLTCYAKHGRLRE----ARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
R+ +++ +LT + L + A +F+ +E + V ++ MI +++ P+ L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV--YDTMIRICSRSSQPHLGL 98
Query: 233 LLFRKMLAEK---VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV---EVRVGT 286
F M+ E+ + P +T ++ +C + G+ IH +V KNGV + V T
Sbjct: 99 RYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV--KNGVFLSDGHVQT 156
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
++ +Y + L DARK+FD I DVV W+ ++ GY G E L +F EM G++P
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
+ + LTAC G +++G I +K +E + +V++ + G +E ++
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 407 VRGMKTDPDSVLWGTLL 423
+ T + W L+
Sbjct: 277 FEKL-TRRNVFSWAALI 292
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 263/487 (54%), Gaps = 41/487 (8%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAA 132
LF P NV W ++I ++ S D+AL + M E N +++S++ +Q
Sbjct: 131 LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKAL-VQRG 185
Query: 133 RAIHCHVIKFAVASAPYVS-TGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK 191
R + + VS T +V A+ G V A ++FD M ER+++S AM+T YA+
Sbjct: 186 RIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Query: 192 HGRLREARLLFEGM-EAD----------------------------SRDVVCWNVMIDEY 222
+ R+ EA LF+ M E D ++V+ W MI Y
Sbjct: 246 NNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGY 305
Query: 223 AQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
+N E L +F KML + V+P+ T +++LS+C L L G+ IH + +
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDN--IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
V +AL++MY K G L ARK+FDN + RD+++WNSMI YA HG+ +EA+ ++++M
Sbjct: 366 EIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
G KPS VT++ +L AC H+GLV KG E F + + + EH+ C+V+L GRAGR
Sbjct: 426 RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGR 485
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
L++ + + +G +L AC +H VS+ +E+ + +L +GTYVL+SNI
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
Query: 460 YAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEM 519
YAA+G AA++R MK G++K+PGCS ++V + H F+ GD HP+ + + +L ++
Sbjct: 546 YAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Query: 520 NCRLKAN 526
+++ N
Sbjct: 606 RNKMRKN 612
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 173/366 (47%), Gaps = 27/366 (7%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSV 123
VG + + LF+ P +V WT +I + +A + R+ ++ N T++++
Sbjct: 59 VGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAM 115
Query: 124 LHGCNLQAARAIHCHVIKFAVASAPYVS----TGLVGAYARGGDVFSAEKVFDEMSERSL 179
+ G R+ + + P + ++ YA+ G + A ++FDEM ER++
Sbjct: 116 VSGY----LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
VS +M+ + GR+ EA LFE M RDVV W M+D A+NG +E LF M
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMP--RRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ I+ A+++ Q ++ + + + ++ + + ++
Sbjct: 230 ERNI----ISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMN 281
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVLTAC 358
A +FD + +++V++W +MI GY + +EEAL +F +M G VKP+ T+V++L+AC
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV-RGMKTDPDSV 417
+ +G +I L+ + +I ++N+ ++G L + G+ D +
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVT-SALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 418 LWGTLL 423
W +++
Sbjct: 401 SWNSMI 406
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 163/328 (49%), Gaps = 27/328 (8%)
Query: 152 TGLVGAYARGGDVFSAEKVFDEM-SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSR 210
T ++ Y + GD+ A ++FD + S +++V+ TAM++ Y + +L A +LF+ M R
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP--ER 138
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
+VV WN MID YAQ+G ++ L LF +M + ++ +++ + Q G ++ +
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLF 194
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
+ +V TA+VD K G +D+AR++FD + +R++++WN+MI GYA + +
Sbjct: 195 ERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRID 250
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA +LF M ++ ++T + ++K +F+ M E + + M
Sbjct: 251 EADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMP-----EKNVISWTTM 301
Query: 391 VNLLGRAGRLEEGYDLVRGMKTD----PDSVLWGTLLWACRLHKNVSLGEEIAEFILS-- 444
+ EE ++ M D P+ + ++L AC + G++I + I
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 445 HNLASSGTYVLLSNIYAASGNWVGAAKV 472
H T LL N+Y+ SG + A K+
Sbjct: 362 HQKNEIVTSALL-NMYSKSGELIAARKM 388
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 50/264 (18%)
Query: 191 KHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
K G++ EAR LF+G+ RDVV W +I Y +
Sbjct: 58 KVGKIAEARKLFDGLP--ERDVVTWTHVITGYIK-------------------------- 89
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
LG + R + V + KN V TA+V Y + L A +F + +
Sbjct: 90 ---------LGDMREARELFDRVDSRKNVV---TWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 311 RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
R+VV+WN+MI GYA G ++AL LFDEM + V++ +++ A G + + +
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNL 193
Query: 371 FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHK 430
F M + + MV+ L + G+++E L M + + + W ++ +
Sbjct: 194 FERMP-----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM-PERNIISWNAMITGYAQNN 247
Query: 431 NVSLGEEIAEFILSHNLASSGTYV 454
+ +++ + + + AS T +
Sbjct: 248 RIDEADQLFQVMPERDFASWNTMI 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 288 LVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
L+ CK G + +ARK+FD + +RDVV W +I GY G EA LFD + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR---VDSRKN 108
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
VT+ A+++ S +S +F M E + + M++ ++GR+++ +L
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 408 RGMKTDPDSVLWGTLLWA 425
M + + V W +++ A
Sbjct: 164 DEM-PERNIVSWNSMVKA 180
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 245/466 (52%), Gaps = 12/466 (2%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G L + +F+ P +V W +++ ++ +AL FY ++ N F+F
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+ +L C LQ R H V+ S +S ++ AYA+ G + SA++ FDEM+
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ + T +++ YAK G + A LF E ++ V W +I Y + G N L LFR
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLF--CEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
KM+A V+P++ T + L + + +L G+ IH Y+ V ++L+DMY K G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 297 SLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
SL+ + ++F D+ D V WN+MI A HG +ALR+ D+M V+P+ T V +L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC HSGLV +G F M +G+ P EH+ C+++LLGRAG +E + M +PD
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+W +L CR+H N LG++ A+ ++ + SS Y+LLS+IYA G W K+R +
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGV 540
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGD--LRHPKSQDIYLMLEEM 519
MK V KE S IE+ ++ F D H + ++IY +L +
Sbjct: 541 MKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 180/406 (44%), Gaps = 48/406 (11%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAP--YVSTG 153
QA+S + Q + +S+L C +L+ + IH H +K P +S
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRH-LKITGFKRPNTLLSNH 87
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
L+G Y + G A KVFD+M R+L S M++ Y K G L AR++F+ M RDVV
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSM--PERDVV 145
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
WN M+ YAQ+G +E L +++ ++ +E + +L++C + L+ R H V
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDV-------------------- 313
V + +++D Y KCG ++ A++ FD + +D+
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 314 -----------VAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
V+W ++I GY G AL LF +M +GVKP TF + L A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
+ G EI M + P ++++ ++G LE + R D V W T+
Sbjct: 326 SLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTM 384
Query: 423 LWACRL----HKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASG 464
+ A HK + + +++ +F + N T V++ N + SG
Sbjct: 385 ISALAQHGLGHKALRMLDDMIKFRVQPN---RTTLVVILNACSHSG 427
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 245/445 (55%), Gaps = 7/445 (1%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVE-PNAFTFSS 122
Y G L S +F+R P + + S+I + +S P+E N +++S
Sbjct: 166 YLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNS 225
Query: 123 VLHGCNLQAARAIHCHVIKFA-VASAPYVS-TGLVGAYARGGDVFSAEKVFDEMSERSLV 180
++ G Q + + FA + +S ++ Y + G + A+ +FD M R +V
Sbjct: 226 MISGYA-QTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
+ M+ YAK G + A+ LF+ M RDVV +N M+ Y QN E L +F M
Sbjct: 285 TWATMIDGYAKLGFVHHAKTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEK 342
Query: 241 EK-VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
E + PD+ TL+ VL + QLG L +H Y+ + + ++G AL+DMY KCGS+
Sbjct: 343 ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 402
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
A +F+ I ++ + WN+MI G AIHG E A + ++ + +KP D+TFV VL AC
Sbjct: 403 HAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS 462
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLW 419
HSGLV +G F LM+ + +EP+++H+GCMV++L R+G +E +L+ M +P+ V+W
Sbjct: 463 HSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIW 522
Query: 420 GTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGS 479
T L AC HK GE +A+ ++ + +YVLLSN+YA+ G W +VR++MK
Sbjct: 523 RTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKER 582
Query: 480 GVEKEPGCSIIEVNNRIHEFIAGDL 504
+EK PGCS IE++ R+HEF +
Sbjct: 583 KIEKIPGCSWIELDGRVHEFFVDSI 607
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 49/401 (12%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSV 123
V H +H V F+ + FLW ++I +HSH QAL ML V + F+ S V
Sbjct: 69 VFHEYH-VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLV 127
Query: 124 LHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
L C+ ++ IH + K + S ++ L+G Y + G + + ++FD M +R
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
VS +M+ Y K G + AR LF+ M + ++++ WN MI YAQ ++ + + K+
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT---SDGVDIASKLF 244
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
A+ D I+ +++ + G +E + + + +V ++D Y K G +
Sbjct: 245 ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVH 300
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVLTAC 358
A+ +FD + RDVVA+NSM+ GY + Y EAL +F +M + P D T V VL A
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 359 GHSGLVSKGWE--IFNLMKNGY---------------------------GMEPK-IEHFG 388
G +SK + ++ + K Y G+E K I+H+
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 389 CMVNLLGRAGRLEEGYDL---VRGMKTDPDSVLWGTLLWAC 426
M+ L G E +D+ + + PD + + +L AC
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 196/346 (56%), Gaps = 2/346 (0%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
+L YA G L+ A +LF ++ RD++ WN MI Y Q G+ E L ++ M ++
Sbjct: 149 LLILYALSGDLQTAGILFRSLKI--RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
PD+ T +V +C L LE G+ H+ + + V +ALVDMY KC S D ++
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD + R+V+ W S+I GY HG E L+ F++M G +P+ VTF+ VLTAC H GLV
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
KGWE F MK YG+EP+ +H+ MV+ LGRAGRL+E Y+ V +WG+LL
Sbjct: 327 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLG 386
Query: 425 ACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
ACR+H NV L E A L + + G YV+ +N YA+ G A+KVR M+ +GV+K+
Sbjct: 387 ACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Query: 485 PGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTP 530
PG S IE+ +H F+ D H S+ IY + EM Y P
Sbjct: 447 PGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
G + L KL Y+ G L + LF ++ W ++I + + L Y
Sbjct: 138 GFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + P+ +TF+SV C+ L+ + H +IK + S V + LV Y +
Sbjct: 198 YDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKC 257
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
+VFD++S R++++ T++++ Y HG++
Sbjct: 258 SSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV-------------------------- 291
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
+E L F KM E RP+ +T L VL++C G ++ G W H Y G+E
Sbjct: 292 -------SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIE 343
Query: 282 VRVG--TALVDMYCKCGSLDDARK-IFDNIVDRDVVAWNSMIMGYAIHG 327
A+VD + G L +A + + + W S++ IHG
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 255/496 (51%), Gaps = 10/496 (2%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
R G D + + Y+ ++ + +F+ +V W S+I +S S +
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 104 FYARMLA-QPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
Y MLA +PN T SV C +L +H +I+ + + ++G Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
A+ G + A +FDEMSE+ V+ A+++ Y HG ++EA LF ME S + WN M
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME--SIGLSTWNAM 337
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I QN E + FR+M+ RP+ +TL ++L S L+ G+ IH++ +
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ V T+++D Y K G L A+++FDN DR ++AW ++I YA+HG S+ A LFD+
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M +G KP DVT AVL+A HSG IF+ M Y +EP +EH+ CMV++L RAG
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAG 517
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSN 458
+L + + + M DP + +WG LL + ++ + + + ++G Y +++N
Sbjct: 518 KLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMAN 577
Query: 459 IYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEE 518
+Y +G W A VR+ MK G++K PG S IE + FIA D +S+++Y ++E
Sbjct: 578 LYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEG 637
Query: 519 MNCRLKANGYTPKTDL 534
+ + Y K +L
Sbjct: 638 LVESMSDKEYIRKQEL 653
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 194/442 (43%), Gaps = 90/442 (20%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARML 109
+ P L KL Y+ ++ +F+ N F + +++ A++ + ++ L
Sbjct: 53 IKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFL 112
Query: 110 A---------QPVEPNAFTFSSVLH---GCNL----QAARAIHCHVIKFAVASAPYVSTG 153
+ P++ + S VL GC+ AR +H VI+ S +V G
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNG 172
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVV 213
++ Y + ++ SA KVFDEMSER +VS +M++ Y+
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS----------------------- 209
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLA-EKVRPDEITLLAVLSSCGQLGALESGRWIHSY 272
Q+G +C +++ MLA +P+ +T+++V +CGQ L G +H
Sbjct: 210 ----------QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 273 VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
+ + +++ + A++ Y KCGSLD AR +FD + ++D V + ++I GY HG +EA
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
+ LF EM +G+ T+ A+++ LM+N + E I F M+
Sbjct: 320 MALFSEMESIGLS----TWNAMISG---------------LMQNNH-HEEVINSFREMIR 359
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
R P++V +LL + N+ G+EI F + N A +
Sbjct: 360 CGSR-----------------PNTVTLSSLLPSLTYSSNLKGGKEIHAFAI-RNGADNNI 401
Query: 453 YVLLSNI--YAASGNWVGAAKV 472
YV S I YA G +GA +V
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRV 423
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 250/466 (53%), Gaps = 52/466 (11%)
Query: 69 HLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVE---PNAFTFS- 121
H H++ ++F+ PN F++ ++I S S Q L ++ M+ + E P+ TF
Sbjct: 62 HFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHF 121
Query: 122 ---SVLHGCNLQAARAIHCHVIKFAV-ASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
+ L C + IHC V+K V S +V TG++ Y + A KVFDE+ +
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP 181
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
DVV W+V+++ Y + G+ +E L +FR+
Sbjct: 182 ---------------------------------DVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCKC 295
ML + + PDE ++ L++C Q+GAL G+WIH +V K+ +E V VGTALVDMY KC
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV-KKKSWIESDVFVGTALVDMYAKC 267
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFVAV 354
G ++ A ++F + R+V +W ++I GYA +GY+++A+ + + G+KP V + V
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGV 327
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L AC H G + +G + M+ Y + PK EH+ C+V+L+ RAGRL++ +L+ M P
Sbjct: 328 LAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKP 387
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS----SGTYVLLSNIYAASGNWVGAA 470
+ +WG LL CR HKNV LGE + +L + V LSNIY + A+
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAS 447
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
KVR +++ GV K PG S++EV+ + +F++GD+ HP I+ ++
Sbjct: 448 KVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 255/487 (52%), Gaps = 43/487 (8%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARM 108
P I+N L YS G +H S +F +V W ++I A + D+ L M
Sbjct: 352 PIVIVN-SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM 410
Query: 109 LAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
Q + + T +++L N + + H +I+ +
Sbjct: 411 QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ------------------- 451
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
F+ M+ + ++ Y+K G +R ++ LFEG RD WN MI Y Q
Sbjct: 452 ------FEGMN-------SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
NG + L+FRKML + +RP+ +T+ ++L +C Q+G+++ G+ +H + V V
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFV 558
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
+ALVDMY K G++ A +F +R+ V + +MI+GY HG E A+ LF M G+
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
KP +TFVAVL+AC +SGL+ +G +IF M+ Y ++P EH+ C+ ++LGR GR+ E Y
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAY 678
Query: 405 DLVRGMKTDPD-SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS--SGTYVLLSNIYA 461
+ V+G+ + + + LWG+LL +C+LH + L E ++E + + SG VLLSN+YA
Sbjct: 679 EFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 462 ASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNC 521
W KVR M+ G++KE G S IE+ ++ F++ D HP S +IY +++ +
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAK 798
Query: 522 RLKANGY 528
++ + +
Sbjct: 799 DMRGDSF 805
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 178/413 (43%), Gaps = 71/413 (17%)
Query: 76 LFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAA 132
+F+ NV W ++I + + +A + M+ V+P+ +F +V ++ +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSI--S 227
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
R+I + + G + GD + + L V++ ++ YA+
Sbjct: 228 RSIKKANVFY-------------GLMLKLGDEYV----------KDLFVVSSAISMYAEL 264
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK-VRPDEITLL 251
G + +R +F+ R++ WN MI Y QN E + LF + + K + DE+T L
Sbjct: 265 GDIESSRRVFDS--CVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
S+ L +E GR H +V + + + + +L+ MY +CGS+ + +F ++ +R
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH----------- 360
DVV+WN+MI + +G +E L L EM G K +T A+L+A +
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 361 -----------------------SGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
SGL+ ++F +GY E + M++ +
Sbjct: 443 AFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFE--GSGYA-ERDQATWNSMISGYTQN 499
Query: 398 GRLEEGYDLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL 447
G E+ + + R M P++V ++L AC +V LG+++ F + L
Sbjct: 500 GHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 53/376 (14%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARM--LAQPVEPNAFTFSS 122
G+ + LF+ P P LW +II ++ +AL FY+RM A +A+T+SS
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 123 VLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA---RGGDVFSAE---KVFD 172
L C NL+A +A+HCH+I+ S+ V L+ Y D F + KVFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 173 EMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECL 232
M +++V+ +++ Y K GR EA C
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEA---------------CRQ---------------- 201
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV--EVRVGTALVD 290
F M+ +V+P ++ + V + +++ + + + ++ V ++ +
Sbjct: 202 --FGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAIS 259
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD-V 349
MY + G ++ +R++FD+ V+R++ WN+MI Y + E++ LF E G SD V
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
T++ +A V G + + + P + MV + R G + + + +
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLS 378
Query: 410 MKTDPDSVLWGTLLWA 425
M+ + D V W T++ A
Sbjct: 379 MR-ERDVVSWNTMISA 393
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
S+ + L+ + G + AR LF+ + + V WN +I + N +P+E LL + +M
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPT--TVLWNTIIIGFICNNLPHEALLFYSRM-- 96
Query: 241 EKVRP----DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+K P D T + L +C + L++G+ +H ++ V +L++MY C
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 297 SLDD------ARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
+ D RK+FDN+ ++VVAWN++I Y G + EA R F M M VKPS V+
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 351 FVAVLTACGHSGLVSKGWEIFNLM 374
FV V A S + K + LM
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLM 240
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 243/456 (53%), Gaps = 16/456 (3%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALS 103
+ G P ++ KL + G L ++ +F+ P P + + +I H + L
Sbjct: 62 KTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLL 121
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAA---------RAIHCHVIKFAVASAPYVSTGL 154
RM + + +T S VL N + + R +H +IK V + T L
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITAL 181
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
V Y + G + SA VF+ M + ++V T+M++ Y G + +A +F + +D+V
Sbjct: 182 VDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV--KDIVV 239
Query: 215 WNVMIDEYAQNG-MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
+N M++ ++++G + ++ M P+ T +V+ +C L + E G+ +H+ +
Sbjct: 240 YNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQI 299
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+++G++L+DMY KCG ++DAR++FD + +++V +W SMI GY +G EEAL
Sbjct: 300 MKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEAL 359
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
LF M ++P+ VTF+ L+AC HSGLV KG+EIF M+ Y M+PK+EH+ C+V+L
Sbjct: 360 ELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDL 419
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL-ASSGT 452
+GRAG L + ++ R M PDS +W LL +C LH NV L A + N G
Sbjct: 420 MGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGA 479
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
Y+ LSN+YA++ W +K+R +MK + K G S
Sbjct: 480 YLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 52/402 (12%)
Query: 85 VFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARA---IHCHVIK 141
+F +TSI S+ +F + + P + ++ N A +A IH +IK
Sbjct: 3 IFRFTSISPRILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIK 62
Query: 142 FAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLL 201
+S L+ + + G + A +VFDE+ + +L + M++ Y KHG ++E LL
Sbjct: 63 TGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLL 122
Query: 202 FEGMEADSRDVVCWNVMIDEYAQNG------MPNE-CLLLFRKMLAEKVRPDEITLLAVL 254
+ M + + + A N +P C L+ +++ V D++ + A++
Sbjct: 123 VQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALV 182
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVV 314
+ + G LES R + + + V T+++ Y G ++DA +IF+ +D+V
Sbjct: 183 DTYVKSGKLESARTVFETMKDE----NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 315 AWNSMIMGYAIHG-YSEEALRLFDEMCGMGVKPSDVTFVAVLTACG-----------HSG 362
+N+M+ G++ G ++ ++ ++ M G P+ TF +V+ AC H+
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 363 LVSKGWEIFNLMKNGYGM---------------------EPKIEHFGCMVNLLGRAGRLE 401
++ G ++ +K G + E + + M++ G+ G E
Sbjct: 299 IMKSG--VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPE 356
Query: 402 EGYDLVRGMK---TDPDSVLWGTLLWACRLHKNVSLGEEIAE 440
E +L MK +P+ V + L AC V G EI E
Sbjct: 357 EALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFE 398
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 252/482 (52%), Gaps = 18/482 (3%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFT 119
+Y + ++ +F P F W +I H+H + LS + ML +P+ +T
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYT 206
Query: 120 FSSVLHGC-----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
FSS+++ C N+ R +H ++K +SA ++ Y + G A + + +
Sbjct: 207 FSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESI 266
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
+ VS +++ K G +A +F A +++V W MI Y +NG + L
Sbjct: 267 EVLTQVSWNSIIDACMKIGETEKALEVFH--LAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F +M+ V D AVL +C L L G+ IH + + VG ALV++Y K
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG + +A + F +I ++D+V+WN+M+ + +HG +++AL+L+D M G+KP +VTF+ +
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV---RGMK 411
LT C HSGLV +G IF M Y + +++H CM+++ GR G L E DL +
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLV 504
Query: 412 TD-PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAA 470
TD ++ W TLL AC H + LG E+++ + + ++VLLSN+Y ++G W
Sbjct: 505 TDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGE 564
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTP 530
VR M G++K PGCS IEV N++ F+ GD HP+ +++ E +NC L+ P
Sbjct: 565 DVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELS---ETLNC-LQHEMRNP 620
Query: 531 KT 532
+T
Sbjct: 621 ET 622
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 43/341 (12%)
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
LV +T+ + AK GR+ AR +F+GM D V WN M+ Y++ G+ E + LF ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMP--ELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
+PD+ + A+LS+C LG ++ GR I S V + V +L+DMY KC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 299 DDARKIFDNIV---------------------------------DRDVVAWNSMIMGYAI 325
A K+F ++ R AWN MI G+A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC-GHSGLVSKGWEIFNLM-KNGYGMEPK 383
G E L LF EM KP TF +++ AC S V G + +M KNG+
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW--SSA 239
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFIL 443
+E +++ + G ++ + ++ V W +++ AC E+
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKALEVFHLAP 298
Query: 444 SHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
N+ T+ + Y +G+ A + M SGV+ +
Sbjct: 299 EKNIV---TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 216/393 (54%), Gaps = 39/393 (9%)
Query: 116 NAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+A+ SS + C L + HC +K S Y+ + LV Y G+V +A KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
+EM ER +VV W MI +AQ + C
Sbjct: 179 EEMPER---------------------------------NVVSWTAMISGFAQEWRVDIC 205
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
L L+ KM P++ T A+LS+C GAL GR +H + + + +L+ M
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVT 350
YCKCG L DA +IFD ++DVV+WNSMI GYA HG + +A+ LF+ M G KP +T
Sbjct: 266 YCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAIT 325
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM 410
++ VL++C H+GLV +G + FNLM +G++P++ H+ C+V+LLGR G L+E +L+ M
Sbjct: 326 YLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENM 384
Query: 411 KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAA 470
P+SV+WG+LL++CR+H +V G AE L + T+V L+N+YA+ G W AA
Sbjct: 385 PMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAA 444
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGD 503
VR LMK G++ PGCS IE+NN + F A D
Sbjct: 445 TVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 40/283 (14%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G + ++ +F P NV WT++I + D L Y++M +PN +TF
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+++L C L R++HC + + S ++S L+ Y + GD+ A ++FD+ S
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ +VS +M+ YA+HG +A LFE M MP
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELM---------------------MPK------- 316
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+PD IT L VLSSC G ++ GR + + H E+ + LVD+ + G
Sbjct: 317 ----SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 297 SLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
L +A ++ +N+ + + V W S++ +HG +R +E
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 249/488 (51%), Gaps = 49/488 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ------ 100
+ G++ ++ L Y+ G L ++ LF+ P+ NV + ++I D+
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 101 --ALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGL 154
A + M + +EP+ TFS VL C+ L+ R IH + K S ++ + L
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
+ YA G + F S++ + S T+M+ C+ ++ +L A F+
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA---FD----------- 445
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
LFR++ + +RP+E T+ ++S+C AL SG I Y
Sbjct: 446 -------------------LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA- 485
Query: 275 NHKNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
K+G++ V T+ + MY K G++ A ++F + + DV +++MI A HG + EA
Sbjct: 486 -IKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
L +F+ M G+KP+ F+ VL AC H GLV++G + F MKN Y + P +HF C+V+
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
LLGR GRL + +L+ V W LL +CR++K+ +G+ +AE ++ +SG+
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDI 512
YVLL NIY SG A +VR LM+ GV+KEP S I + N+ H F DL HP SQ I
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Query: 513 YLMLEEMN 520
Y MLE M+
Sbjct: 725 YTMLETMD 732
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 196/459 (42%), Gaps = 84/459 (18%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y L + LF+R P N+ + S+I ++ +QA+ + ++ + FT+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 121 SSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+ L C+L +H GLV V + +S+
Sbjct: 152 AGALGFCGERCDLDLGELLH----------------GLV--------------VVNGLSQ 181
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ + + ++ Y+K G+L +A LF+ D RD V WN +I Y + G E L L
Sbjct: 182 QVFL-INVLIDMYSKCGKLDQAMSLFD--RCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 237 KMLAEKVRPDEITLLAVLSSCG---QLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYC 293
KM + + L +VL +C G +E G IH Y ++ V TAL+DMY
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGY-----AIHGYSEEALRLFDEMCGMGVKPSD 348
K GSL +A K+F + ++VV +N+MI G+ S EA +LF +M G++PS
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSP 358
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLM-KNGY----------------------GME---- 381
TF VL AC + + G +I L+ KN + GM+
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 382 ---PKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLG 435
I + M++ + +LE +DL R + + P+ ++ AC +S G
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG 478
Query: 436 EEIAEFILSHNLASSGTYVLLSNI--YAASGNWVGAAKV 472
E+I + + + + T V S+I YA SGN A +V
Sbjct: 479 EQIQGYAIKSGI-DAFTSVKTSSISMYAKSGNMPLANQV 516
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 237/456 (51%), Gaps = 40/456 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFY 105
G P+ + + + G + +F+ P P+V W +++ +S H ++A+S +
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
+M Q ++P+ T S +L C L+ + IH VI+ ++ ++ +GL+ Y+
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
+ +E +FD+ + D+ CWN MI
Sbjct: 465 EKMEISECIFDDC--------------------------------INELDIACWNSMISG 492
Query: 222 YAQNGMPNECLLLFRKMLAEKVR-PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
+ N + + L+LFR+M V P+E + VLSSC +L +L GR H V
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ V TAL DMYCKCG +D AR+ FD ++ ++ V WN MI GY +G +EA+ L+ +M
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
G KP +TFV+VLTAC HSGLV G EI + M+ +G+EP+++H+ C+V+ LGRAGRL
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
E+ L SVLW LL +CR+H +VSL +AE ++ + SS YVLLSN Y
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRI 496
++ W +A ++ LM + V K PG S N +
Sbjct: 733 SSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 4/231 (1%)
Query: 127 CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAML 186
C L + + IH +++ + S Y+ L+ Y GD A KVFDEMS R + S A L
Sbjct: 21 CKL-SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFL 79
Query: 187 TCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
T K G L EA +F+GM RDVV WN MI + G + L+++++M+ + P
Sbjct: 80 TFRCKVGDLGEACEVFDGMP--ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL-DDARKIF 305
TL +VLS+C ++ G H + VG AL+ MY KCG + D ++F
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+++ + V++ ++I G A EA+++F MC GV+ V +L+
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 170/392 (43%), Gaps = 58/392 (14%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSV 123
VG L + +F+ P +V W ++I ++AL Y RM+ P+ FT +SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 124 LHGCN--LQAARAIHCH--VIKFAVASAPYVSTGLVGAYARGGDVFS-AEKVFDEMSERS 178
L C+ L + CH +K + +V L+ YA+ G + +VF+ +S+ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
VS TA++ A+ ++ EA + +FR M
Sbjct: 205 EVSYTAVIGGLARENKVLEA---------------------------------VQMFRLM 231
Query: 239 LAEKVRPDEITLLAVLS------SCGQLGAL---ESGRWIHSYVGNHKNGVEVRVGTALV 289
+ V+ D + L +LS C L + E G+ IH G ++ + +L+
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
++Y K ++ A IF + + +VV+WN MI+G+ S++++ M G +P++V
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
T ++VL AC SG V G IF+ + +P + + M++ EE R
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 410 MK---TDPDSVLWGTLLWACRLHKNVSLGEEI 438
M+ PD +L +C + + G++I
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
A + CK G L +A ++FD + +RDVV+WN+MI G+ E+AL ++ M G
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 346 PSDVTFVAVLTAC 358
PS T +VL+AC
Sbjct: 136 PSRFTLASVLSAC 148
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 248/456 (54%), Gaps = 47/456 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
+ G++ L L Y G + ++ +FN ++ +WT++I ++H+ ++ALS
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ +M ++PN T +SVL GC NL+ R++H IK + V+ LV YA
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYA 388
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ CY R+A+ +FE ME++ +D+V WN +I
Sbjct: 389 K---------------------------CYQN----RDAKYVFE-MESE-KDIVAWNSII 415
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
++QNG +E L LF +M +E V P+ +T+ ++ S+C LG+L G +H+Y + K G
Sbjct: 416 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY--SVKLG 473
Query: 280 V----EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
V VGTAL+D Y KCG AR IFD I +++ + W++MI GY G + +L L
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
F+EM KP++ TF ++L+ACGH+G+V++G + F+ M Y P +H+ CMV++L
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
RAG LE+ D++ M PD +G L C +H LGE + + +L + + YVL
Sbjct: 594 RAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVL 653
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIE 491
+SN+YA+ G W A +VR+LMK G+ K G S +E
Sbjct: 654 VSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 154/310 (49%), Gaps = 45/310 (14%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEP 115
KL Y G+ + +F++ P P+ +LW ++ + S + + Y ++
Sbjct: 81 KLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY 140
Query: 116 NAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ FS L C +L + IHC ++K + V TGL+ YA+ G++ SA KVF
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
++++ R++V T+M+ Y K N + E
Sbjct: 200 NDITLRNVVCWTSMIAGYVK---------------------------------NDLCEEG 226
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALV 289
L+LF +M V +E T ++ +C +L AL G+W H + K+G+E+ + T+L+
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV--KSGIELSSCLVTSLL 284
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY KCG + +AR++F+ D+V W +MI+GY +G EAL LF +M G+ +KP+ V
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 350 TFVAVLTACG 359
T +VL+ CG
Sbjct: 345 TIASVLSGCG 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD 312
+LS C + +L + GN G ++ + T LV +Y G DAR +FD I + D
Sbjct: 50 LLSKCTNIDSLRQSHGV--LTGNGLMG-DISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 313 VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
W M+ Y ++ S E ++L+D + G + D+ F L AC
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 271/534 (50%), Gaps = 78/534 (14%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTFSSV 123
+G + ++ +F+ P V ++ S+I +S + D+ L Y +M+A+ ++P++ TF+
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 124 LHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
+ C L+ A+ C + F + +V + ++ Y + G + AE +F +M++R +
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV 182
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGME---------------------ADSR-------- 210
+ T M+T +A+ G+ +A + M+ D++
Sbjct: 183 ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGY 242
Query: 211 --------DVVCWNVMIDEYAQNGMPNECLLLFRKM-------------------LAEKV 243
+VV ++D YA+ G +F +M LA K
Sbjct: 243 LYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Query: 244 ------------RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV-GTALVD 290
+PD +TL+ VL +C Q+G+L++GR +H Y+ K V RV TAL+D
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYI--LKRHVLDRVTATALMD 360
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
MY KCG+L +R+IF+++ +D+V WN+MI Y IHG +E + LF +M ++P T
Sbjct: 361 MYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM 410
F ++L+A HSGLV +G F++M N Y ++P +H+ C+++LL RAGR+EE D++
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 411 KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAA 470
K D +W LL C H+N+S+G+ A IL N S G L+SN +A + W A
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 471 KVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
KVR LM+ +EK PG S IEVN + F+ DL H + + +L + ++
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 42/293 (14%)
Query: 135 IHCHVIKFA-VASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHG 193
IH VI + + +S L+ + R G++ A KVFDE+ +R
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRG--------------- 80
Query: 194 RLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAV 253
V +N MI Y++ P+E L L+ +M+AEK++PD T
Sbjct: 81 ------------------VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 254 LSSCGQLGALESGR--WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
+ +C LE G W + +KN +V V ++++++Y KCG +D+A +F + R
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKN--DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF 371
DV+ W +M+ G+A G S +A+ + EM G V + +L A G G G +
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 372 N-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
L + G M +E +V++ + G +E + M +V WG+L+
Sbjct: 241 GYLYRTGLPMNVVVE--TSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLI 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 43/289 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
R GL + ++ L Y+ VG + + +F+R W S+I + +++A
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
M + +P+ T VL C +L+ R +HC+++K V +T L+ Y+
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD-RVTATALMDMYS 363
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + S+ ++F+ + + LV M++CY HG
Sbjct: 364 KCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG-------------------------- 397
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR-WIHSYVGNHKN 278
NG E + LF KM + PD T ++LS+ G +E G+ W + +K
Sbjct: 398 -----NG--QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKI 450
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDN-IVDRDVVAWNSMIMGYAIH 326
+ L+D+ + G +++A + ++ +D + W +++ G H
Sbjct: 451 QPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 253/467 (54%), Gaps = 52/467 (11%)
Query: 73 SVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGC-- 127
++ L + TP+ W + +S SD +++ Y+ M + ++PN TF +L C
Sbjct: 68 TLLLHSSDSTPST--WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 128 --NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAM 185
L A R I V+K YV L+ Y A KVFDEM+ER++VS
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS---- 181
Query: 186 LTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRP 245
WN ++ +NG N F +M+ ++ P
Sbjct: 182 -----------------------------WNSIMTALVENGKLNLVFECFCEMIGKRFCP 212
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIF 305
DE T++ +LS+CG G L G+ +HS V + + R+GTALVDMY K G L+ AR +F
Sbjct: 213 DETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVF 270
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG-MGVKPSDVTFVAVLTACGHSGLV 364
+ +VD++V W++MI+G A +G++EEAL+LF +M V+P+ VTF+ VL AC H+GLV
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLV 330
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLW 424
G++ F+ M+ + ++P + H+G MV++LGRAGRL E YD ++ M +PD+V+W TLL
Sbjct: 331 DDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLS 390
Query: 425 ACRLH---KNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGV 481
AC +H + +GE++ + ++ SG V+++N +A + W AA+VR +MK + +
Sbjct: 391 ACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKM 450
Query: 482 EKEPGCSIIEVNNRIHEFIAGDLRHPKSQ--DIYLMLEEMNCRLKAN 526
+K G S +E+ H F +G P+S+ IY +L+ +L +
Sbjct: 451 KKIAGESCLELGGSFHRFFSG--YDPRSEYVSIYELLDLFKFQLTCD 495
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 264/515 (51%), Gaps = 47/515 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
G++ IL L Y VG + ++ +F+R +V W II + + A+
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + ++ + T ++++ NL+ + + C+ I+ + S +++ ++ YA+
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMI 219
G + A+KVFD E+ L+ +L YA+ G EA LF GM+ + +V+ WN++I
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 220 ---------DE--------------------------YAQNGMPNECLLLFRKMLAEKVR 244
DE QNG E +L RKM +R
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYV-GNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
P+ ++ LS+C L +L GR IH Y+ N ++ V + T+LVDMY KCG ++ A K
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGL 363
+F + + ++ N+MI YA++G +EA+ L+ + G+G+KP ++T VL+AC H+G
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 364 VSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+++ EIF + + M+P +EH+G MV+LL AG E+ L+ M PD+ + +L+
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLV 723
Query: 424 WACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEK 483
+C + L + ++ +L +SG YV +SN YA G+W K+R +MK G++K
Sbjct: 724 ASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKK 783
Query: 484 EPGCSIIEVNNR--IHEFIAGDLRHPKSQDIYLML 516
+PGCS I++ +H F+A D H + +I +ML
Sbjct: 784 KPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 204/439 (46%), Gaps = 48/439 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALS 103
+ GL+ + L Y G L + +F+ P N W +++ + +++A+
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
++ M Q VEP T S+ L ++ + H I + + T L+ Y
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + AE VFD M E+ +V+ WN++I
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVT---------------------------------WNLII 347
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
Y Q G+ + + + + M EK++ D +TL ++S+ + L+ G+ + Y H
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
++ + + ++DMY KCGS+ DA+K+FD+ V++D++ WN+++ YA G S EALRLF M
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
GV P+ +T+ ++ + +G V + ++F M++ G+ P + + M+N + + G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGC 526
Query: 400 LEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL- 455
EE +R M+ P++ L AC ++ +G I +I+ NL S +
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII-RNLQHSSLVSIE 585
Query: 456 --LSNIYAASGNWVGAAKV 472
L ++YA G+ A KV
Sbjct: 586 TSLVDMYAKCGDINKAEKV 604
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 193/427 (45%), Gaps = 81/427 (18%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+ALS M + + + +L GC +L + IH ++K
Sbjct: 53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILK-------------- 98
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
GD ++ + + T ++ YAK L A +LF + R+V W
Sbjct: 99 -----NGDFYARNEYIE----------TKLVIFYAKCDALEIAEVLFSKLRV--RNVFSW 141
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+I + G+ L+ F +ML ++ PD + V +CG L GR +H YV
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV-- 199
Query: 276 HKNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
K+G+E V V ++L DMY KCG LDDA K+FD I DR+ VAWN++++GY +G +EEA+
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE-----IFNLMKNGYGMEPKIEHFG 388
RLF +M GV+P+ VT L+A + G V +G + I N M+ + + +F
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 389 CMVNLLGRA--------------------GRLEEGY--------DLVRGMKTDPDSVLWG 420
C V L+ A G +++G L+R K D V
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 421 TLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI---YAASGNWVGAAKVRSLMK 477
TL+ A +N+ LG+E+ + + H+ S VL S + YA G+ V A KV
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESD--IVLASTVMDMYAKCGSIVDAKKVFD--- 434
Query: 478 GSGVEKE 484
S VEK+
Sbjct: 435 -STVEKD 440
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 46/376 (12%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEP 115
KL Y+ L + LF++ NVF W +II + AL + ML + P
Sbjct: 112 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 116 NAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ F +V C + R +H +V+K + +V++ L Y + G + A KVF
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
DE+ +R+ V+ A++ Y ++G+ EA
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEA--------------------------------- 258
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALV 289
+ LF M + V P +T+ LS+ +G +E G+ H+ NG+E+ +GT+L+
Sbjct: 259 IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA--IVNGMELDNILGTSLL 316
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
+ YCK G ++ A +FD + ++DVV WN +I GY G E+A+ + M +K V
Sbjct: 317 NFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
T +++A + + G E+ + E I ++++ + G + + V
Sbjct: 377 TLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK-VFD 434
Query: 410 MKTDPDSVLWGTLLWA 425
+ D +LW TLL A
Sbjct: 435 STVEKDLILWNTLLAA 450
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 262/559 (46%), Gaps = 85/559 (15%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ GL P + L YS G + + T+F+ + +W +++ A++ +D AL
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTG------ 153
+ M + V P++FT S+V+ C++ +++H + K + S + +
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 154 -------------------------LVGAYARGGDVFSAEKVFDEMSERS---------L 179
L+ + G A KVF +M + +
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 180 VSVT--------------------------------AMLTCYAKHGRLREARLLFEGMEA 207
SVT +++ Y+K G A +F M
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 208 DSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR 267
+ ++V WN MI Y++N +P + LF ML++ + PD +++ +VL + +L G+
Sbjct: 540 E--NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
Query: 268 WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHG 327
+H Y + + AL+DMY KCG A IF + + ++ WN MI GY HG
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657
Query: 328 YSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHF 387
AL LFDEM G P DVTF+++++AC HSG V +G IF MK YG+EP +EH+
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717
Query: 388 GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL 447
MV+LLGRAG LEE Y ++ M + DS +W LL A R H NV LG AE +L
Sbjct: 718 ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777
Query: 448 ASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHP 507
TYV L N+Y +G AAK+ LMK G+ K+PGCS IEV++R + F +G P
Sbjct: 778 ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSP 837
Query: 508 KSQDIYLMLEEMNCRLKAN 526
+I+ +L RLK+N
Sbjct: 838 MKAEIFNVLN----RLKSN 852
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 134/294 (45%), Gaps = 35/294 (11%)
Query: 100 QALSFYARML-AQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGL 154
QAL Y++ + P + FTF S+L C NL + IH V+ P+++T L
Sbjct: 42 QALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSL 101
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
V Y + G + A +VFD S+ G+ A RDV
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQ------------------------SGVSA--RDVTV 135
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL--ESGRWIHSY 272
WN MID Y + E + FR+ML VRPD +L V+S + G E G+ IH +
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 273 VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEE 331
+ + + + TAL+DMY K G DA ++F I D+ +VV WN MI+G+ G E
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKI 384
+L L+ VK +F L AC S G +I +++K G +P +
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 171/413 (41%), Gaps = 49/413 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP-TPNVFLWTSIIHAHSHS---DQAL 102
R LD L L Y G + +F NV LW +I S + +L
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
Y V+ + +F+ L C N R IHC V+K + + PYV T L+ Y
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
++ G V AE VF + ++ L AM+
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAA------------------------------ 347
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
YA+N L LF M + V PD TL V+S C LG G+ +H+ +
Sbjct: 348 ---YAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI 404
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ +AL+ +Y KCG DA +F ++ ++D+VAW S+I G +G +EAL++F +
Sbjct: 405 QSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGD 464
Query: 339 MC--GMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLG 395
M +KP +V AC + G ++ +++K G + + +++L
Sbjct: 465 MKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG--SSLIDLYS 522
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNV-SLGEEIAEFILSHNL 447
+ G E + M T+ + V W +++ +C N+ L ++ +LS +
Sbjct: 523 KCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQGI 573
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 262/552 (47%), Gaps = 91/552 (16%)
Query: 47 RRG-LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQAL 102
R+G LD P L Y+ G + +V +F + +VF + ++I + A+
Sbjct: 88 RKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-DVFGYNALISGFVVNGSPLDAM 146
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCN---LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
Y M A + P+ +TF S+L G + L + +H K S YV +GLV +Y+
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYS 206
Query: 160 RGGDVFSAEKVFDEMSER-SLVSVTAMLTCYAKHGRLREARLLFEGMEAD---------- 208
+ V A+KVFDE+ +R V A++ Y++ R +A L+F M +
Sbjct: 207 KFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT 266
Query: 209 ---------------------------SRDVVCWNVMIDEYAQN---------------- 225
D+V N +ID Y ++
Sbjct: 267 SVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER 326
Query: 226 ---------------GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
G + L LF +ML +RPD +TL VL +CG+L +L GR IH
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 271 SY-----VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAI 325
Y + N K+ E + +L+DMY KCG L DAR +FD++ +D +WN MI GY +
Sbjct: 387 GYMIVSGLLNRKSSNEF-IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE 385
E AL +F MC GVKP ++TFV +L AC HSG +++G M+ Y + P +
Sbjct: 446 QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
Query: 386 HFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSL----GEEIAEF 441
H+ C++++LGRA +LEE Y+L + V+W ++L +CRLH N L G+ + E
Sbjct: 506 HYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHEL 565
Query: 442 ILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIA 501
H G YVL+SN+Y +G + VR M+ V+K PGCS I + N +H F
Sbjct: 566 EPEH----CGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFT 621
Query: 502 GDLRHPKSQDIY 513
G+ HP+ + I+
Sbjct: 622 GNQTHPEFKSIH 633
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 132/261 (50%), Gaps = 12/261 (4%)
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
F K F + S R+ S+ M YAK G +R A L+F G E RDV +N +I +
Sbjct: 85 FMVRKGFLDDSPRAGTSLVNM---YAKCGLMRRAVLVFGGSE---RDVFGYNALISGFVV 138
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
NG P + + +R+M A + PD+ T ++L + L + +H + V
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYV 197
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
G+ LV Y K S++DA+K+FD + DR D V WN+++ GY+ E+AL +F +M G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
V S T +VL+A SG + G I L +K G G + + + ++++ G++ LEE
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN--ALIDMYGKSKWLEE 315
Query: 403 GYDLVRGMKTDPDSVLWGTLL 423
+ M + D W ++L
Sbjct: 316 ANSIFEAMD-ERDLFTWNSVL 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGV---EVRVGTALVDMYCKCGSLDDARKIF 305
T +A L C Q SG+ IH ++ + G R GT+LV+MY KCG + A +F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFM--VRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF 119
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
+RDV +N++I G+ ++G +A+ + EM G+ P TF ++L
Sbjct: 120 GG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL---------- 168
Query: 366 KGWEIFNL--MKNGYGMEPKIE-----HFGC-MVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
KG + L +K +G+ K+ + G +V + +E+ + + DSV
Sbjct: 169 KGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 418 LWGTLL 423
LW L+
Sbjct: 229 LWNALV 234
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 232/434 (53%), Gaps = 38/434 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G ++ +F P +V WT II + + +AL +++M VEPN T+
Sbjct: 151 YGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATY 207
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV 180
VL VS+G VG + G + + S SL
Sbjct: 208 VCVL-------------------------VSSGRVGCLSLGKGIHGL--ILKRASLISLE 240
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM-L 239
+ A++ Y K +L +A +F E + +D V WN MI E + LF M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFG--ELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ ++PD L +VLS+C LGA++ GRW+H Y+ + +GTA+VDMY KCG ++
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
A +IF+ I ++V WN+++ G AIHG+ E+LR F+EM +G KP+ VTF+A L AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 360 HSGLVSKGWEIFNLMKN-GYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
H+GLV +G F+ MK+ Y + PK+EH+GCM++LL RAG L+E +LV+ M PD +
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRI 478
Query: 419 WGTLLWACRLHKNV-SLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
G +L AC+ + L +EI + L SG YVLLSNI+AA+ W A++R LMK
Sbjct: 479 CGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMK 538
Query: 478 GSGVEKEPGCSIIE 491
G+ K PG S IE
Sbjct: 539 VKGISKVPGSSYIE 552
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 170/393 (43%), Gaps = 54/393 (13%)
Query: 71 HHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGC 127
+ SV L + + F + +++ +++ D+ + Y ++ P+ FTF V C
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC 116
Query: 128 N----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVT 183
++ + IH V K YV LV Y G+ +A KVF EM R +VS T
Sbjct: 117 GKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWT 176
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV 243
++T + + G +EA F M+ V
Sbjct: 177 GIITGFTRTGLYKEALDTFSKMD------------------------------------V 200
Query: 244 RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
P+ T + VL S G++G L G+ IH + + + + G AL+DMY KC L DA +
Sbjct: 201 EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMR 260
Query: 304 IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM-CGMGVKPSDVTFVAVLTACGHSG 362
+F + +D V+WNSMI G S+EA+ LF M G+KP +VL+AC G
Sbjct: 261 VFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLG 320
Query: 363 LVSKG-WEIFNLMKNGYGMEPKIEHFG-CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWG 420
V G W ++ G + H G +V++ + G +E ++ G+++ + W
Sbjct: 321 AVDHGRWVHEYILTAGIKWDT---HIGTAIVDMYAKCGYIETALEIFNGIRS-KNVFTWN 376
Query: 421 TLLWACRLH----KNVSLGEEIAEFILSHNLAS 449
LL +H +++ EE+ + NL +
Sbjct: 377 ALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVT 409
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 249/493 (50%), Gaps = 49/493 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFY 105
GL+ +N L Y+ G + ++ LF+ + W S+I +S ++ A+ +
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF 221
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
+M + EP+ T S+L C +L+ R + I + + ++ + L+ Y +
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC 281
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
GD L AR +F M +D V W MI
Sbjct: 282 GD-------------------------------LDSARRVFNQM--IKKDRVAWTAMITV 308
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
Y+QNG +E LF +M V PD TL VLS+CG +GALE G+ I ++
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 368
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ V T LVDMY KCG +++A ++F+ + ++ WN+MI YA G+++EAL LFD
Sbjct: 369 IYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR--- 425
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
M V PSD+TF+ VL+AC H+GLV +G F+ M + +G+ PKIEH+ +++LL RAG L+
Sbjct: 426 MSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLD 485
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA-SSGTYVLLSNIY 460
E ++ + PD ++ +L AC K+V++ E+ ++ A ++G YV+ SN+
Sbjct: 486 EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL 545
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDL-----RHPKSQDIYLM 515
A W +AK+R+LM+ GV K PGCS IE+ + EF+AG R L+
Sbjct: 546 ADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLL 605
Query: 516 LEEMNCRLKANGY 528
+EEM GY
Sbjct: 606 VEEMKRERYEFGY 618
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 44/377 (11%)
Query: 57 NFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS----DQALSFYARMLAQP 112
NF + ++ +G ++S LF+ T PN + + +I +++ + ALS Y RM
Sbjct: 69 NFLIPKAVE-LGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSG 127
Query: 113 VEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAE 168
++P+ FT++ V C + R++H + K +
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGL------------------------ 163
Query: 169 KVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP 228
ER + +++ YAK G++ AR LF+ E RD V WN MI Y++ G
Sbjct: 164 -------ERDVHINHSLIMMYAKCGQVGYARKLFD--EITERDTVSWNSMISGYSEAGYA 214
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
+ + LFRKM E PDE TL+++L +C LG L +GR + K G+ +G+ L
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+ MY KCG LD AR++F+ ++ +D VAW +MI Y+ +G S EA +LF EM GV P
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
T VL+ACG G + G +I + ++ I +V++ G+ GR+EE +
Sbjct: 335 GTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 409 GMKTDPDSVLWGTLLWA 425
M ++ W ++ A
Sbjct: 394 AMPVKNEAT-WNAMITA 409
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/492 (33%), Positives = 252/492 (51%), Gaps = 47/492 (9%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYA 106
+RG + + L YS G L ++F++ NV WT++I S+ D A+S +
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--SNKDDAVSIFL 361
Query: 107 RMLAQPVEPNAFTFSSVLHG--CNLQAARAIHCH--VIKFAVASAPYVSTGLVGAYARGG 162
M V PN TF +++ CN Q + H IK S P V G
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV-----------G 410
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
+ F +T YAK L +A+ FE + R+++ WN MI +
Sbjct: 411 NSF--------------------ITLYAKFEALEDAKKAFE--DITFREIISWNAMISGF 448
Query: 223 AQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCG--QLGALESGRWIHSYVGNHKNGV 280
AQNG +E L +F AE + P+E T +VL++ + +++ G+ H+++
Sbjct: 449 AQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
V +AL+DMY K G++D++ K+F+ + ++ W S+I Y+ HG E + LF +M
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMI 567
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
V P VTF++VLTAC G+V KG+EIFN+M Y +EP EH+ CMV++LGRAGRL
Sbjct: 568 KENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
+E +L+ + P + ++L +CRLH NV +G ++AE + SG+YV + NIY
Sbjct: 628 KEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNN-----RIHEFIAGDLRHPKSQDIYLM 515
A W AA++R M+ V KE G S I+V + + F +GD HPKS +IY M
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRM 747
Query: 516 LEEMNCRLKANG 527
+E + + G
Sbjct: 748 VEIIGLEMNLEG 759
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 48/329 (14%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSV 123
Y G +++ +F P+V W +I+ + AL+F RM + V +AFT+S+
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 124 LHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
L C + V+K + S V + Y+R G A +VFDEMS + +
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN-ECLLLFRKM 238
+S WN ++ +Q G E +++FR M
Sbjct: 241 IS---------------------------------WNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCKCG 296
+ E V D ++ +V+++C L+ R IH K G E + VG L+ Y KCG
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLC--IKRGYESLLEVGNILMSRYSKCG 325
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
L+ + +F + +R+VV+W +M I ++A+ +F M GV P++VTFV ++
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTM-----ISSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 357 ACGHSGLVSKGWEIFNL-MKNGYGMEPKI 384
A + + +G +I L +K G+ EP +
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 187/413 (45%), Gaps = 53/413 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD----QAL 102
+ GL+ ++ YS G + +F+ ++ W S++ S +A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ M+ + VE + +F+SV+ C +L+ AR IH IK S V L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
++ G + + + VF +MSER++VS T M++ ++ D V
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMIS-------------------SNKDDAVS---- 358
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+F M + V P+E+T + ++++ ++ G IH
Sbjct: 359 ---------------IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGF 403
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
E VG + + +Y K +L+DA+K F++I R++++WN+MI G+A +G+S EAL++F
Sbjct: 404 VSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS 463
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVS--KGWEIF-NLMKNGYGMEPKIEHFGCMVNLLG 395
+ P++ TF +VL A + +S +G +L+K G P + ++++
Sbjct: 464 AAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYA 520
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA 448
+ G ++E + M + + +W +++ A H + + ++ N+A
Sbjct: 521 KRGNIDESEKVFNEM-SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 178 SLVSVT-AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
S V V+ A++ Y K GR A +FE + DVV WN ++ + N + L
Sbjct: 109 SFVCVSNAVMGMYRKAGRFDNALCIFENLV--DPDVVSWNTILSGFDDNQIA---LNFVV 163
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCK 294
+M + V D T LS C G + S V K G+E + VG + + MY +
Sbjct: 164 RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV--VKTGLESDLVVGNSFITMYSR 221
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHG-YSEEALRLFDEMCGMGVKPSDVTFVA 353
GS AR++FD + +D+++WNS++ G + G + EA+ +F +M GV+ V+F +
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTS 281
Query: 354 VLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
V+T C H + +I L +K GY E +E +++ + G LE + M +
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGY--ESLLEVGNILMSRYSKCGVLEAVKSVFHQM-S 338
Query: 413 DPDSVLWGTLL 423
+ + V W T++
Sbjct: 339 ERNVVSWTTMI 349
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 11/231 (4%)
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV---RPDEITLLA 252
R A LF+G + N I E + P L +F++ L DE+TL
Sbjct: 25 RIAHKLFDG-SSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCL 83
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD 312
L +C G L+ G IH + V V A++ MY K G D+A IF+N+VD D
Sbjct: 84 ALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 313 VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN 372
VV+WN+++ G+ + + AL M GV T+ L+ C S G ++ +
Sbjct: 142 VVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 373 LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ G+E + + + R+G G V + D + W +LL
Sbjct: 199 TVVKT-GLESDLVVGNSFITMYSRSGSF-RGARRVFDEMSFKDMISWNSLL 247
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 247/451 (54%), Gaps = 17/451 (3%)
Query: 47 RRGLDPHPILNFK----LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSD 99
R+ D P N + YS G + + LF++ ++ W ++I + D
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC--NLQAARAIHCH--VIKFAVASAPYVSTGLV 155
+AL +Y ML ++P+ +L ++ +++ + H ++K ++ ++
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
YA D+ A + F+ + + S A++ + K+G + +AR +F+ + +D+ W
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD--QTHDKDIFSW 405
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
N MI YAQ+ P L LFR+M++ +V+PD IT+++V S+ LG+LE G+ H Y+
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIF---DNIVDRDVVAWNSMIMGYAIHGYSEE 331
+ A++DMY KCGS++ A IF NI + WN++I G A HG+++
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMV 391
AL L+ ++ + +KP+ +TFV VL+AC H+GLV G F MK+ +G+EP I+H+GCMV
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG 451
+LLG+AGRLEE ++++ M D ++WG LL A R H NV + E A + + + + G
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGG 645
Query: 452 TYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
V+LSN+YA +G W A VR M+ VE
Sbjct: 646 CKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 156/342 (45%), Gaps = 54/342 (15%)
Query: 102 LSFYARMLAQPVEPNAFTFS-----------SVLHGC----NLQAARAIHCHVIKFAVAS 146
+S AR + P + F FS S L C ++ R IHC V+K + S
Sbjct: 16 ISLQARCFSAPSRTH-FDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDS 74
Query: 147 APYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGME 206
Y+ ++ YA+ + AE VF + ++ S M+ Y + RL +A LF+ M
Sbjct: 75 NGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMP 134
Query: 207 ADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG 266
R V + +I YAQN +E + LFR+M + +E+TL V+S+C LG +
Sbjct: 135 --ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 267 RWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIH 326
R + S K V V T L+ MYC C L DARK+FD + +R++V WN M+ GY+
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 327 GYSEEALRLFD-------------------------------EMCGMGVKPSDVTFVAVL 355
G E+A LFD EM G+KPS+V V +L
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 356 TACGHSGLVSKGWEIF-NLMKNGYG----MEPKIEHFGCMVN 392
+A S SKG ++ ++K G+ ++ I HF + N
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 206/466 (44%), Gaps = 49/466 (10%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHG 126
L ++ LF+ P + +T++I ++ ++Q A+ + M + N T ++V+
Sbjct: 123 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 127 CN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSV 182
C+ + R + IK + +VST L+ Y + A K+FDEM ER+LV+
Sbjct: 183 CSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTW 242
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
ML Y+K G + +A LF+ + +D+V W MID + +E L+ + +ML
Sbjct: 243 NVMLNGYSKAGLIEQAEELFD--QITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCG 300
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH------------------KNGVEVRV 284
++P E+ ++ +LS+ + G +H + N +++ +
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 285 G-------------TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEE 331
AL+ + K G ++ AR++FD D+D+ +WN+MI GYA +
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 332 ALRLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
AL LF EM VKP +T V+V +A G + +G + + N + P +
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAI 479
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSVL--WGTLLWACRLHKNVSLGEEIAEFILSHNL- 447
+++ + G +E ++ K S + W ++ H + L ++ + S +
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 448 ASSGTYV-LLSNIYAASGNWVGAAKVRSLMKGSGVE---KEPGCSI 489
+S T+V +LS A +G S+ G+E K GC +
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYV---GNHKNGVEVRVGTALVDMYCKC-------- 295
E L++ L SC + GR IH V G NG + ++++MY KC
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGY---ICNSVLNMYAKCRLLADAES 97
Query: 296 -----GSLD------------------DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEA 332
LD DA K+FD + +R V++ ++I GYA + EA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 333 LRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE------- 385
+ LF EM +G+ ++VT V++AC H G + W+ M ++ K+E
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGI---WDC--RMLQSLAIKLKLEGRVFVST 212
Query: 386 ---HFGC-------------------------MVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
H C M+N +AG +E+ +L + T+ D V
Sbjct: 213 NLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIV 271
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMK 477
WGT++ C L KN L E + + + V++ ++ +AS VG++K L
Sbjct: 272 SWGTMIDGC-LRKN-QLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL-H 328
Query: 478 GSGVEKEPGCSIIEVNNRIHEFIAGDLRH--PKSQDIYLMLEEMNCRLK 524
G+ V++ C ++F+ + H S DI L L++ +K
Sbjct: 329 GTIVKRGFDC---------YDFLQATIIHFYAVSNDIKLALQQFEASVK 368
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 258/472 (54%), Gaps = 30/472 (6%)
Query: 76 LFNRTPTPNVFLWTSII------HAHSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC-- 127
+F+ P +V T++I H + QA + R+L + PN FTF +V+
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQA---FKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 128 --NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAM 185
+++ + +HC+ +K +AS +V + ++ Y + + A + FD+ + ++VS+T +
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 186 LTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR- 244
++ Y K EA LF M R VV WN +I ++Q G E + F ML E V
Sbjct: 166 ISGYLKKHEFEEALSLFRAMP--ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHS----YVGNHKNGVEVRVGTALVDMYCKCGSLDD 300
P+E T +++ + + +G+ IH+ ++G N V V +L+ Y KCG+++D
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFN---VFVWNSLISFYSKCGNMED 280
Query: 301 ARKIFDNIVD--RDVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVTFVAVLTA 357
+ F+ + + R++V+WNSMI GYA +G EEA+ +F++M ++P++VT + VL A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEP---KIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
C H+GL+ +G+ FN N Y +P ++EH+ CMV++L R+GR +E +L++ M DP
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
W LL C++H N L + A IL + +YV+LSN Y+A NW + +R
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 475 LMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKAN 526
MK +G+++ GCS IEV ++I F+ D + ++Y ML ++ L+ N
Sbjct: 460 KMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEEN 511
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 117/292 (40%), Gaps = 66/292 (22%)
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
+A KVFDE+ E ++S TA++ + K R EA
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEAS-------------------------- 78
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
F+++L +RP+E T V+ S ++ G+ +H Y V VG
Sbjct: 79 -------QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVG 131
Query: 286 TALVDMYCKCGSLDDARKIFDNIVD-------------------------------RDVV 314
+A+++ Y K +L DAR+ FD+ D R VV
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 315 AWNSMIMGYAIHGYSEEALRLFDEMCGMGVK-PSDVTFVAVLTACGHSGLVSKGWEIFNL 373
WN++I G++ G +EEA+ F +M GV P++ TF +TA + G I
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 374 MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL-WGTLLW 424
G + + +++ + G +E+ ++ + +++ W +++W
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIW 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 143/321 (44%), Gaps = 49/321 (15%)
Query: 51 DPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYAR 107
DP+ + L Y +++LF P +V W ++I S + ++A++ +
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 108 MLAQPVE-PNAFTF----SSVLHGCNLQAARAIHCHVIKF-AVASAPYVSTGLVGAYARG 161
ML + V PN TF +++ + + A ++IH IKF +V L+ Y++
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 162 GDVFSAEKVFDEMSE--RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
G++ + F+++ E R++VS +M+ YA +GR EA +FE M D+
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT---------- 325
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHK- 277
+RP+ +T+L VL +C G ++ G + + V ++
Sbjct: 326 ----------------------NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDD 363
Query: 278 -NGVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRL 335
N +E+ +VDM + G +A ++ ++ +D + W +++ G IH S + L
Sbjct: 364 PNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIH--SNKRLAK 421
Query: 336 FDEMCGMGVKPSDVTFVAVLT 356
+ + P DV+ +L+
Sbjct: 422 LAASKILELDPRDVSSYVMLS 442
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 229/448 (51%), Gaps = 29/448 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYA 106
+ GLD + L Y+ +G + + +F+ P N LW ++ +
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY----------- 185
Query: 107 RMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFS 166
L +P F ++ L A+ + V + V G VG G S
Sbjct: 186 --LKYSKDPEVFRLFCLMRDTGL----ALDALTLICLVKACGNVFAGKVGKCVHG---VS 236
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
+ F + S+ S+ M Y K L AR LFE + R+VV W +I +A+
Sbjct: 237 IRRSFIDQSDYLQASIIDM---YVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCE 291
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV-- 284
E LFR+ML E + P++ TL A+L SC LG+L G+ +H Y+ +NG+E+
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM--IRNGIEMDAVN 349
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
T+ +DMY +CG++ AR +FD + +R+V++W+SMI + I+G EEAL F +M V
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
P+ VTFV++L+AC HSG V +GW+ F M YG+ P+ EH+ CMV+LLGRAG + E
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 405 DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASG 464
+ M P + WG LL ACR+HK V L EIAE +LS S YVLLSNIYA +G
Sbjct: 470 SFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAG 529
Query: 465 NWVGAAKVRSLMKGSGVEKEPGCSIIEV 492
W VR M G K G S EV
Sbjct: 530 MWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMP--NECLL 233
E +V +++ Y + RL A F + R+ WN ++ Y+++ ++ LL
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDM 291
L+ +M D L+ + +C LG LE+G IH KNG++ V +LV+M
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA--MKNGLDKDDYVAPSLVEM 153
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
Y + G+++ A+K+FD I R+ V W ++ GY + E RLF M G+ +T
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213
Query: 352 VAVLTACGH 360
+ ++ ACG+
Sbjct: 214 ICLVKACGN 222
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 244/455 (53%), Gaps = 41/455 (9%)
Query: 77 FNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAA- 132
F R ++ WT++I ++ +D +AL + + + +E + S+L ++ +
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 133 ---RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCY 189
+ IHCH+++ + + D + + LV V Y
Sbjct: 504 LIVKEIHCHILR--------------------------KGLLDTVIQNELVDV------Y 531
Query: 190 AKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
K + A +FE ++ +DVV W MI A NG +E + LFR+M+ + D +
Sbjct: 532 GKCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
LL +LS+ L AL GR IH Y+ +E + A+VDMY CG L A+ +FD I
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
+ ++ + SMI Y +HG + A+ LFD+M V P ++F+A+L AC H+GL+ +G
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRG 709
Query: 370 IFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
+M++ Y +EP EH+ C+V++LGRA + E ++ V+ MKT+P + +W LL ACR H
Sbjct: 710 FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSH 769
Query: 430 KNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSI 489
+GE A+ +L + G VL+SN++A G W KVR+ MK SG+EK PGCS
Sbjct: 770 SEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSW 829
Query: 490 IEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
IE++ ++H+F A D HP+S++IY L E+ +L+
Sbjct: 830 IEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 51/330 (15%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEP 115
KL Y G L + +F+ P F W ++I A+ + + AL+ Y M + V
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 116 NAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+F ++L C ++++ +H ++K S ++ LV YA+ D+ +A ++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
D E+ D V WN ++ Y+ +G E
Sbjct: 241 DGFQEKG--------------------------------DAVLWNSILSSYSTSGKSLET 268
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH-SYVGNHKNGVEVRVGTALVD 290
L LFR+M P+ T+++ L++C + G+ IH S + + + E+ V AL+
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
MY +CG + A +I + + DVV WNS+I GY + +EAL F +M G K +V+
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 351 FVAVLTACG-----------HSGLVSKGWE 369
+++ A G H+ ++ GW+
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 138/321 (42%), Gaps = 50/321 (15%)
Query: 112 PVEPNAFTFSSVLHGCNLQAA----RAIHCHVIK-FAVASAPYVSTGLVGAYARGGDVFS 166
PVE F+ VL C + A R +H + K F +++ LV Y + G +
Sbjct: 79 PVE----AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDD 134
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
AEKVFDEM +R T +A WN MI Y NG
Sbjct: 135 AEKVFDEMPDR---------TAFA------------------------WNTMIGAYVSNG 161
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV---GNHKNGVEVR 283
P L L+ M E V + A+L +C +L + SG +HS + G H G V
Sbjct: 162 EPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV- 220
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
ALV MY K L AR++FD ++ D V WNS++ Y+ G S E L LF EM
Sbjct: 221 --NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
G P+ T V+ LTAC G EI + ++ ++ + R G++ +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 403 GYDLVRGMKTDPDSVLWGTLL 423
++R M + D V W +L+
Sbjct: 339 AERILRQM-NNADVVTWNSLI 358
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 41/282 (14%)
Query: 84 NVFLWTSIIHAHSHSDQALS---FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIH 136
+ LW SI+ ++S S ++L + M PN++T S L C+ + + IH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 137 CHVIKFAVASAP-YVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
V+K + S+ YV L+ Y R G + AE++ +M
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM--------------------- 346
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLS 255
++ DVV WN +I Y QN M E L F M+A + DE+++ ++++
Sbjct: 347 ------------NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 256 SCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVA 315
+ G+L L +G +H+YV H ++VG L+DMY KC + F + D+D+++
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
W ++I GYA + EAL LF ++ ++ ++ ++L A
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 238/458 (51%), Gaps = 48/458 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
R G ++ + Y+ + ++ +F+ N W+++I + ++ +A
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGE 292
Query: 104 FYARMLAQP----VEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+ +ML V P A +L GC +L R +HC+ +K
Sbjct: 293 VFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVK-------------- 336
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
A + D + +++S YAK+G L +A F E +DV+ +
Sbjct: 337 -----------AGFILDLTVQNTIISF------YAKYGSLCDAFRQFS--EIGLKDVISY 377
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
N +I N P E LF +M +RPD TLL VL++C L AL G H Y
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV 437
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
H V + AL+DMY KCG LD A+++FD + RD+V+WN+M+ G+ IHG +EAL L
Sbjct: 438 HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG-YGMEPKIEHFGCMVNLL 394
F+ M GV P +VT +A+L+AC HSGLV +G ++FN M G + + P+I+H+ CM +LL
Sbjct: 498 FNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYV 454
RAG L+E YD V M +PD + GTLL AC +KN LG E+++ + S ++ + V
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLV 616
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEV 492
LLSN Y+A+ W AA++R + K G+ K PG S ++V
Sbjct: 617 LLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 125/254 (49%), Gaps = 37/254 (14%)
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVA-SAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
F S+L C NL + IH H++K ++ S+ V L YA +V A VFDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
H R+ + W++MI YA N + L L
Sbjct: 62 ----------------PHPRINP---------------IAWDLMIRAYASNDFAEKALDL 90
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
+ KML VRP + T VL +C L A++ G+ IHS+V ++ V TALVD Y K
Sbjct: 91 YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK 150
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM-GVKPSDVTFVA 353
CG L+ A K+FD + RD+VAWN+MI G+++H + + LF +M + G+ P+ T V
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 354 VLTACGHSGLVSKG 367
+ A G +G + +G
Sbjct: 211 MFPALGRAGALREG 224
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 47/321 (14%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTP--NVFLWTSIIHAHSHSD---QALSFYARMLAQPVE 114
L R Y+S + + +F+ P P N W +I A++ +D +AL Y +ML V
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 115 PNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
P +T+ VL C + + IH HV A+ YV T LV YA
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYA----------- 149
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
K G L A +F+ E RD+V WN MI ++ + +
Sbjct: 150 --------------------KCGELEMAIKVFD--EMPKRDMVAWNAMISGFSLHCCLTD 187
Query: 231 CLLLFRKML-AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
+ LF M + + P+ T++ + + G+ GAL G+ +H Y ++ V T ++
Sbjct: 188 VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGIL 247
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
D+Y K + AR++FD ++ V W++MI GY + +EA +F +M + + V
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML-VNDNVAMV 306
Query: 350 TFVA---VLTACGHSGLVSKG 367
T VA +L C G +S G
Sbjct: 307 TPVAIGLILMGCARFGDLSGG 327
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 208/357 (58%), Gaps = 11/357 (3%)
Query: 141 KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARL 200
K S YV T LVG Y GG++ A KVFDEM ER+ V+ M+T G +A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 201 LFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA-EKVRPDEITLLAVLSSCGQ 259
E M +R VV W +ID YA+ P E +LLF +M+A + ++P+EIT+LA+L +
Sbjct: 211 FLEKMP--NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWN 268
Query: 260 LGALESGRWIHSYVGNHKNGV---EVRVGTALVDMYCKCGSLDDARKIFDNIVD--RDVV 314
LG L+ +H+YVG K G ++RV +L+D Y KCG + A K F I + +++V
Sbjct: 269 LGDLKMCGSVHAYVG--KRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLV 326
Query: 315 AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGW-EIFNL 373
+W +MI +AIHG +EA+ +F +M +G+KP+ VT ++VL AC H GL + + E FN
Sbjct: 327 SWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNT 386
Query: 374 MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVS 433
M N Y + P ++H+GC+V++L R GRLEE + + + +V+W LL AC ++ +
Sbjct: 387 MVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAE 446
Query: 434 LGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
L E + ++ + G YVL+SNI+ +G ++ A + R M GV K PG S +
Sbjct: 447 LAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 231/434 (53%), Gaps = 17/434 (3%)
Query: 70 LHHSVTLFNRTPTPNVFLWTSIIHAHS-HSDQALS---FYARMLAQPVEPNAFTFSSVLH 125
+ ++ ++F P+ F + +II + H +LS F+ M + V P+ TF V
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 126 GC------NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
C +L + +HC ++F + S + L+ Y+ + SA ++FDE +R +
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
V+ ++ K + AR LF+ M RD+V WN +I YAQ E + LF +M+
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPL--RDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
A ++PD + +++ LS+C Q G + G+ IH Y + ++ + T LVD Y KCG +D
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
A +IF+ D+ + WN+MI G A+HG E + F +M G+KP VTF++VL C
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS--- 416
HSGLV + +F+ M++ Y + +++H+GCM +LLGRAG +EE +++ M D +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 417 -VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
+ W LL CR+H N+ + E+ A + + + G Y ++ +YA + W KVR +
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 476 M-KGSGVEKEPGCS 488
+ + V+K G S
Sbjct: 482 IDRDKKVKKNVGFS 495
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 257/464 (55%), Gaps = 12/464 (2%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPN-VFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAF 118
+Y G + ++++F R P N W ++I ++ + ++AL M ++ +
Sbjct: 202 AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEH 261
Query: 119 TFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
+F +VL+ + L+ + +H V+K S +VS+G+V Y + G++ AE
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
+L S ++M+ Y+ G++ EA+ LF+ + +++V W M Y P+ L L
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSL--SEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 235 FRKMLA-EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYC 293
R +A E PD + +++VL +C +E G+ IH + ++ ++ TA VDMY
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
KCG+++ A +IFD+ +RD V +N+MI G A HG+ ++ + F++M G KP ++TF+A
Sbjct: 440 KCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMA 499
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM-KT 412
+L+AC H GLV +G + F M Y + P+ H+ CM++L G+A RL++ +L+ G+ +
Sbjct: 500 LLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQV 559
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
+ D+V+ G L AC +KN L +E+ E +L ++ Y+ ++N YA+SG W ++
Sbjct: 560 EKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRI 619
Query: 473 RSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLML 516
R M+G +E GCS ++ + H F + D+ H +++ IY ML
Sbjct: 620 RHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 42/282 (14%)
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H IK S LV Y++ G + A VFDEM ER++ S A++ Y K +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQ-NGMPNECLLLFRKM---LAEKVRPDEITLL 251
+EAR LFE + RD++ +N ++ +A+ +G +E + +F +M + + D+ T+
Sbjct: 71 KEARELFESDNCE-RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 252 AVLSSCGQLGALESGRWIHS-YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD---- 306
++ +L + G +H V +G + V ++L+ MY KCG + IF+
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAV-SSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 307 NIVD------------------------------RDVVAWNSMIMGYAIHGYSEEALRLF 336
VD D ++WN++I GYA +GY EEAL++
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNG 377
M G+K + +F AVL + G E+ ++KNG
Sbjct: 249 VSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 244/503 (48%), Gaps = 42/503 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA----HSHSDQALSF 104
G D + KL SY G +F+ NV T++I H D L
Sbjct: 185 GYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHED-GLRL 243
Query: 105 YARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
++ M V PN+ T+ S L C+ + + IH + K+ +
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGI---------------- 287
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
E L +A++ Y+K G + +A +FE D V V++
Sbjct: 288 ---------------ESELCIESALMDMYSKCGSIEDAWTIFES--TTEVDEVSMTVILV 330
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
AQNG E + F +ML V D + AVL +L G+ +HS V K
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
V L++MY KCG L D++ +F + R+ V+WNSMI +A HG+ AL+L++EM
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
+ VKP+DVTF+++L AC H GL+ KG E+ N MK +G+EP+ EH+ C++++LGRAG L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 401 EEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIY 460
+E + + PD +W LL AC H + +GE AE + SS ++L++NIY
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMN 520
++ G W AK MK GV KE G S IE+ ++ H F+ D HP+++ IY +L +
Sbjct: 571 SSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLF 630
Query: 521 CRLKANGYTPKTDLVLHDIGEEQ 543
+ GY P +L G+++
Sbjct: 631 PVMVDEGYRPDKRFILCYTGDDR 653
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 9/295 (3%)
Query: 148 PYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEA 207
P++ L + + + F E V ++ +LV ++L+ YAK G+L +A LF+ M
Sbjct: 61 PHLGPCLHASIIKNPEFF--EPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPM 118
Query: 208 DSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR 267
RDV+ N++ + +N +L ++ML D TL VLS C +
Sbjct: 119 --RDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTK 175
Query: 268 WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHG 327
IH+ E+ VG L+ Y KCG R +FD + R+V+ ++I G +
Sbjct: 176 MIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235
Query: 328 YSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHF 387
E+ LRLF M V P+ VT+++ L AC S + +G +I L+ YG+E ++
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIE 294
Query: 388 GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
++++ + G +E+ + + T+ D V +L L +N S E I FI
Sbjct: 295 SALMDMYSKCGSIEDAWTIFES-TTEVDEVSMTVILVG--LAQNGSEEEAIQFFI 346
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALS 103
+R + +N L YS G L S T+F R P N W S+I A H H AL
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN 128
Y M V+P TF S+LH C+
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACS 469
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 231/430 (53%), Gaps = 6/430 (1%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSV 123
YS +G++ + F+ N W S++H + S + L R+ + E +A +++ +
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE-LDEARRVFDKIPEKDAVSWNLI 207
Query: 124 LHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVT 183
+ + C + +P L+G Y ++ A FD M +++ VS
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK- 242
M++ Y K G ++ A LF M +D + ++ MI Y QNG P + L LF +ML
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMS--KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 325
Query: 243 -VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
++PDEITL +V+S+ QLG G W+ SY+ H ++ + T+L+D+Y K G A
Sbjct: 326 YIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKA 385
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS 361
K+F N+ +D V++++MIMG I+G + EA LF M + P+ VTF +L+A HS
Sbjct: 386 FKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHS 445
Query: 362 GLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
GLV +G++ FN MK+ + +EP +H+G MV++LGRAGRLEE Y+L++ M P++ +WG
Sbjct: 446 GLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGA 504
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGV 481
LL A LH NV GE + +G L+ IY++ G W A VR +K +
Sbjct: 505 LLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKL 564
Query: 482 EKEPGCSIIE 491
K GCS +E
Sbjct: 565 CKTLGCSWVE 574
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 187/396 (47%), Gaps = 35/396 (8%)
Query: 50 LDP---HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALS 103
L+P H L+F + S + V ++ + FN + F W ++ H + +
Sbjct: 34 LEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDS---FSWGCLVRFLSQHRKFKETVD 90
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
Y M + P++ +SVL C N+ + IH +K + YV TGLVG Y+
Sbjct: 91 VYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYS 150
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
R G + A+K FD+++E++ VS ++L Y + G L EAR +F+ + +D V WN++I
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP--EKDAVSWNLII 208
Query: 220 DEYAQNG-MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN--H 276
YA+ G M N C LF M + I L+ +C ++ + +Y
Sbjct: 209 SSYAKKGDMGNAC-SLFSAMPLKSPASWNI-LIGGYVNCREM------KLARTYFDAMPQ 260
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
KNGV ++ Y K G + A ++F + +D + +++MI Y +G ++AL+LF
Sbjct: 261 KNGVS---WITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 317
Query: 337 DEMCGMG--VKPSDVTFVAVLTACGHSGLVSKG-WEIFNLMKNGYGMEPKIEHFGCMVNL 393
+M ++P ++T +V++A G S G W + ++G ++ + +++L
Sbjct: 318 AQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS--TSLIDL 375
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
+ G + + + + D+V + ++ C ++
Sbjct: 376 YMKGGDFAKAFKMFSNL-NKKDTVSYSAMIMGCGIN 410
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 227/436 (52%), Gaps = 52/436 (11%)
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHGCNLQAA-----RAIHCHVIKFAVASAPYVSTGLVG 156
L F R P ++F+ + + Q A R IH V K + + T LVG
Sbjct: 49 LDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVG 108
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
Y+ GDV A +VFDE E+ +++V W
Sbjct: 109 FYSSVGDVDYARQVFDETPEK--------------------------------QNIVLWT 136
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
MI Y +N E + LF++M AEK+ D + + LS+C LGA++ G I+S
Sbjct: 137 AMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 277 KN--GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
K +++ + +L++MY K G + ARK+FD + +DV + SMI GYA++G ++E+L
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 335 LFDEMCGMG------VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
LF +M + + P+DVTF+ VL AC HSGLV +G F M Y ++P+ HFG
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG 316
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA 448
CMV+L R+G L++ ++ + M P++V+W TLL AC LH NV LGEE+ I +
Sbjct: 317 CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Query: 449 SSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPK 508
G YV LSNIYA+ G W +K+R ++ + PG S IE+ + I+EF++G P
Sbjct: 377 HVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSG----PD 429
Query: 509 SQDIYLMLEEMNCRLK 524
+ D LM+ E++ L+
Sbjct: 430 NNDEQLMMGEISEVLR 445
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 45/282 (15%)
Query: 64 YSSVGHLHHSVTLFNRTP-TPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFT 119
YSSVG + ++ +F+ TP N+ LWT++I A++ ++ +A+ + RM A+ +E +
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFA--VASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
+ L C +Q I+ IK +A + L+ Y + G+ A K+FDE
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEA--DSRDVVCWNVMIDEYAQNGMPNEC 231
+ + + T+M+ YA +G+ +E+ LF+ M+ S+D V
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV------------------ 271
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG-RWIHSYVGNHK-NGVEVRVGTALV 289
+ P+++T + VL +C G +E G R S + ++ E G +V
Sbjct: 272 -----------ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG-CMV 319
Query: 290 DMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSE 330
D++C+ G L DA + + + + + V W +++ ++HG E
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI----TLLAVLSSCGQLGALESGRWIHS 271
N + +Y ++G P + LL FR + P + L A+ S Q + GR IH+
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHA 89
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSE 330
V +++ T+LV Y G +D AR++FD ++ ++V W +MI Y + S
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGC 389
EA+ LF M ++ V L+AC G V G EI++ +K + +
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 390 MVNLLGRAGRLEEGYDLV-RGMKTD 413
++N+ ++G E+ L M+ D
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKD 234
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 241/435 (55%), Gaps = 17/435 (3%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSSV 123
Y G + + +F+ P NV W ++I + + A+ V N T+ +
Sbjct: 91 YGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEM 150
Query: 124 LHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
+ G ++ AR + + F + + S ++G Y + A K F+++ E++
Sbjct: 151 IKGYGKRIEIEKARELF-ERMPFELKNVKAWSV-MLGVYVNNRKMEDARKFFEDIPEKNA 208
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
+ M++ Y + G + EAR +F + A RD+V WN +I YAQNG ++ + F M
Sbjct: 209 FVWSLMMSGYFRIGDVHEARAIFYRVFA--RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR--VGTALVDMYCKCGS 297
E PD +T+ ++LS+C Q G L+ GR +HS + NH+ G+E+ V AL+DMY KCG
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI-NHR-GIELNQFVSNALIDMYAKCGD 324
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
L++A +F++I R V NSMI AIHG +EAL +F M + +KP ++TF+AVLTA
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
C H G + +G +IF+ MK ++P ++HFGC+++LLGR+G+L+E Y LV+ M P+
Sbjct: 385 CVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDT 443
Query: 418 LWGTLLWACRLHKNVSLGEEIAEFILS----HNLASSGTYVLLSNIYAASGNWVGAAKVR 473
+ G LL AC++H + + E++ + I + N S +SN+YA + W A +R
Sbjct: 444 VLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALR 503
Query: 474 SLMKGSGVEKEPGCS 488
M+ G+EK PG S
Sbjct: 504 VEMEKRGLEKSPGLS 518
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 12/272 (4%)
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK 191
+ +H IKF V S V + L+ Y + G V SA KVFDEM ER++ + AM+ Y
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE--KVRPDEIT 249
+G A LFE + R+ V W MI Y + + LF +M E V+ +
Sbjct: 125 NGDAVLASGLFEEISV-CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVM 183
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
L +++ +E R + KN V + ++ Y + G + +AR IF +
Sbjct: 184 LGVYVNN----RKMEDARKFFEDI-PEKNAF---VWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
RD+V WN++I GYA +GYS++A+ F M G G +P VT ++L+AC SG + G E
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 370 IFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
+ +L+ N G+E ++++ + G LE
Sbjct: 296 VHSLI-NHRGIELNQFVSNALIDMYAKCGDLE 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVR-PDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
+I + G P + L+L+ + V P + L+ +C + + G+ +HS
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACAC-VVPRVVLGKLLHSESIKF 75
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
+V VG++L+ MY KCG + ARK+FD + +R+V WN+MI GY +G + A LF
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM 374
+E + V + VT++ ++ G + K E+F M
Sbjct: 136 EE---ISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 245/471 (52%), Gaps = 23/471 (4%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----N 128
LF+R + W ++I+ ++ +A + +M VE + T++ + GC N
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 129 LQAARAIHCHVIKFAVASAPYV------STGLVGAYARGGDV--FSAEKVFDEMSERSLV 180
A + + F + P + L+GA G ++ + +D +
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR-- 318
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
++T Y+K LR A ++F E +S + WN +I YAQ E L R+ML
Sbjct: 319 --NTLITMYSKCKDLRHALIVFRQTEENS--LCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 241 EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE-VRVGTALVDMYCKCGSLD 299
+P+ ITL ++L C ++ L+ G+ H Y+ K + + +LVD+Y K G +
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
A+++ D + RD V + S+I GY G AL LF EM G+KP VT VAVL+AC
Sbjct: 435 AAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS 494
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLW 419
HS LV +G +F M+ YG+ P ++HF CMV+L GRAG L + D++ M P W
Sbjct: 495 HSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATW 554
Query: 420 GTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGS 479
TLL AC +H N +G+ AE +L + G YVL++N+YAA+G+W A+VR++M+
Sbjct: 555 ATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDL 614
Query: 480 GVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKAN-GYT 529
GV+K+PGC+ I+ ++ F GD P++ + Y +L+ +N +K N GY
Sbjct: 615 GVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA 665
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 12/385 (3%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFY 105
G++ H +L KL YS+ + + ++ + + W +I +++ ++ + ++ Y
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
RM+++ + P+AFT+ SVL C ++ R +H + + S+ YV L+ Y R
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGM--EADSRDVVCWNVMI 219
++ A ++FD M ER VS A++ CYA G EA LF+ M V+ WN++
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKN 278
Q G L L +M D + ++ L +C +GA+ G+ IH + + +
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD 312
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
G++ V L+ MY KC L A +F + + WNS+I GYA SEEA L E
Sbjct: 313 GID-NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLRE 371
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
M G +P+ +T ++L C + G E + + + +V++ ++G
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLL 423
++ V + + D V + +L+
Sbjct: 432 KIVAAKQ-VSDLMSKRDEVTYTSLI 455
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 252/498 (50%), Gaps = 44/498 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQ-PVEPNAFT 119
Y +G + + +LF+R NV WT++I + + + + RM + V+ N+ T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+ + C + IH V + + ++ L+ Y++ G + A+ VF M
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS-------------------------- 209
+ VS +++T + ++ EA LFE M
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 210 ---RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG 266
+D + W MI + NG E L F KML ++V P+ T +VLS+ L L G
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 267 RWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIH 326
IH V ++ V +LV MYCKCG+ +DA KIF I + ++V++N+MI GY+ +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 327 GYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEH 386
G+ ++AL+LF + G +P+ VTF+A+L+AC H G V GW+ F MK+ Y +EP +H
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHN 446
+ CMV+LLGR+G L++ +L+ M P S +WG+LL A + H V L E A+ ++
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637
Query: 447 LASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRH 506
S+ YV+LS +Y+ G ++ ++ K ++K+PG S I + +H F+AGD
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD--- 694
Query: 507 PKSQDIYLMLEEMNCRLK 524
+SQ L LEE+ LK
Sbjct: 695 -ESQ---LNLEEIGFTLK 708
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 17/319 (5%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTFSS 122
+Y+ G + + +F+ P + ++I A + L + E NA ++++
Sbjct: 90 AYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYAT 149
Query: 123 VLHGCNLQAARAIHCHVIKFAVASAPY------VSTGLVGAYARGGDVFSAEKVFDEMSE 176
++ G RA +F A P S L+ Y R G A +VF M+
Sbjct: 150 MITG----FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ +VS ++M+ Y K GR+ +AR LF+ M R+V+ W MID Y + G + LF
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMT--ERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 237 KMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+M E V+ + TL + +C G IH V ++ +G +L+ MY K
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
G + +A+ +F + ++D V+WNS+I G EA LF++M G + V++ ++
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMI 379
Query: 356 TACGHSGLVSKGWEIFNLM 374
G +SK E+F +M
Sbjct: 380 KGFSGKGEISKCVELFGMM 398
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 35/336 (10%)
Query: 143 AVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLF 202
++A + + +AR G++ AE +F +MS RS+VS AM++ YA++G++ +A +F
Sbjct: 45 TTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 203 EGMEADSRDVVCWNVMIDEYAQN------------GMPNECLLLFRKMLAEKVRP---DE 247
+ M R +N MI +N +P + + + M+ VR DE
Sbjct: 105 DEMPV--RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 248 ITLL----------AVLSSCGQLGALESGRWIHSYVGNHKNGV-EVRVGTALVDMYCKCG 296
L +V S+ G L +G+W + V EV +++V YCK G
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVL 355
+ DAR +FD + +R+V+ W +MI GY G+ E+ LF M G VK + T +
Sbjct: 223 RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF 282
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHF--GCMVNLLGRAGRLEEGYDLVRGMKTD 413
AC +G +I L+ M + + F ++++ + G + E V G+ +
Sbjct: 283 KACRDFVRYREGSQIHGLVSR---MPLEFDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKN 338
Query: 414 PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS 449
DSV W +L+ K +S E+ E + ++ S
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVS 374
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 47/258 (18%)
Query: 62 RSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAF 118
+ +S G + V LF P + WT++I A + + ++AL ++ +ML + V PN++
Sbjct: 380 KGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 119 TFSSVLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
TFSSVL +L IH V+K + + V LV Y + G+ A K+F +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
SE ++VS M++ Y+ +G ++A LF +E+ ++
Sbjct: 500 SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE----------------------- 536
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG----TALVD 290
P+ +T LA+LS+C +G ++ G W Y + K+ + G +VD
Sbjct: 537 ----------PNGVTFLALLSACVHVGYVDLG-W--KYFKSMKSSYNIEPGPDHYACMVD 583
Query: 291 MYCKCGSLDDARKIFDNI 308
+ + G LDDA + +
Sbjct: 584 LLGRSGLLDDASNLISTM 601
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 241/471 (51%), Gaps = 40/471 (8%)
Query: 63 SYSSVGHLHHSVTLFNRTP-TPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAF 118
SY+ G + + +F+ + ++ W S+I H + A + +M VE + +
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 119 TFSSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
T++ +L C+ + +++H VIK + + L+ Y +
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ-------------- 352
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
G + +A LFE ++ S+D++ WN +I +AQ G+ + +
Sbjct: 353 ---------------FPTGTMEDALSLFESLK--SKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F + + +++ D+ A+L SC L L+ G+ IH+ V ++L+ MY K
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSK 455
Query: 295 CGSLDDARKIFDNIVDR-DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
CG ++ ARK F I + VAWN+MI+GYA HG + +L LF +MC VK VTF A
Sbjct: 456 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 515
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
+LTAC H+GL+ +G E+ NLM+ Y ++P++EH+ V+LLGRAG + + +L+ M +
Sbjct: 516 ILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 414 PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVR 473
PD ++ T L CR + + ++A +L TYV LS++Y+ W A V+
Sbjct: 576 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVK 635
Query: 474 SLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLK 524
+MK GV+K PG S IE+ N++ F A D +P QDIY+M++++ ++
Sbjct: 636 KMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 184 AMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKV 243
AM++ YA G + +A+ +F+G+ S+D++ WN MI ++++ + LF +M V
Sbjct: 243 AMISSYADCGSVSDAKRVFDGL-GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 244 RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCK--CGSLD 299
D T +LS+C G+ +H V K G+E AL+ MY + G+++
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMV--IKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
DA +F+++ +D+++WNS+I G+A G SE+A++ F + +K D F A+L +C
Sbjct: 360 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 360 HSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
+ G +I L K+G+ + ++ + + G +E + + + +V
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFV--ISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 419 WGTLL 423
W ++
Sbjct: 478 WNAMI 482
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 158/379 (41%), Gaps = 52/379 (13%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEP 115
++ SY G L ++ LF+ P + W ++I ++ + A + M +
Sbjct: 40 RILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV 99
Query: 116 NAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+ ++FS +L G +H VIK YV + LV YA+ V A + F
Sbjct: 100 DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAF 159
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
E+SE + VS A++ + + ++ A L ME + V +D
Sbjct: 160 KEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA------VTMD----------- 202
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
A P +TLL C L + +H+ V E+ + A++
Sbjct: 203 --------AGTFAP-LLTLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISS 247
Query: 292 YCKCGSLDDARKIFDNIV-DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
Y CGS+ DA+++FD + +D+++WNSMI G++ H E A LF +M V+ T
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR------AGRLEEGY 404
+ +L+AC + +IF +G ++ +E N L G +E+
Sbjct: 308 YTGLLSACS-----GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 405 DLVRGMKTDPDSVLWGTLL 423
L +K+ D + W +++
Sbjct: 363 SLFESLKS-KDLISWNSII 380
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 117/302 (38%), Gaps = 47/302 (15%)
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
Q HC+ IK S YVS ++ +Y + G + A +FDEM +R VS M++
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
Y G+L +A LF M+ DV D
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDV---------------------------------DGY 102
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
+ +L + + G +H V V VG++LVDMY KC ++DA + F I
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 309 VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV-TFVAVLTACGHSGLVSKG 367
+ + V+WN++I G+ + A L M D TF +LT
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFC--- 219
Query: 368 WEIFNLMKNGY------GMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
NL+K + G++ +I M++ G + + + G+ D + W +
Sbjct: 220 ----NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 422 LL 423
++
Sbjct: 276 MI 277
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 225/434 (51%), Gaps = 40/434 (9%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALSFYARMLAQPVEPNAFTF 120
YS G L S LF P + W S+I + + + +A+ ++ ML P+ T
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTL 554
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++VL C+ L + IH + ++ + + + LV Y++ G + A +V+D + E
Sbjct: 555 AAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
VS +++++ Y++HG +++ LLF RD+V +D +A
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLF-------RDMVMSGFTMDSFA-----------IS 656
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+L DE +L G +H+Y+ E VG++L+ MY K G
Sbjct: 657 SILKAAALSDESSL---------------GAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
S+DD K F I D++AW ++I YA HG + EAL++++ M G KP VTFV VL+
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC H GLV + + N M YG+EP+ H+ CMV+ LGR+GRL E + M PD+
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
++WGTLL AC++H V LG+ A+ + + +G Y+ LSNI A G W + R LM
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Query: 477 KGSGVEKEPGCSII 490
KG+GV+KEPG S +
Sbjct: 882 KGTGVQKEPGWSSV 895
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 185/419 (44%), Gaps = 75/419 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALS---FYARMLAQPVEPNAFTF 120
Y+ GH+ ++ +F+R P P+V WT ++ ++ S+ A S + M VE N T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 121 SSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+SV+ C + A +H V K V+ L+ Y++ GD+ +E+V
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV------ 408
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
FE ++ R + NVMI ++Q+ P + + LF
Sbjct: 409 -------------------------FEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFT 442
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+ML E +R DE ++ ++LS L L G+ +H Y +++ VG++L +Y KCG
Sbjct: 443 RMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
SL+++ K+F I +D W SMI G+ +GY EA+ LF EM G P + T AVLT
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 357 ACGHSGLVSKGWEI----------------------------FNLMKNGYGMEPKIEHFG 388
C + +G EI L + Y P+++
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 389 C--MVNLLGRAGRLEEGYDLVRGMKTDP---DSVLWGTLLWACRLHKNVSLGEEIAEFI 442
C +++ + G +++G+ L R M DS ++L A L SLG ++ +I
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 47/365 (12%)
Query: 47 RRGLDPHPI-LNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQAL 102
RR L P + L L YS+ G + + LF+ P P+V +I H +++L
Sbjct: 76 RRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCN-LQA---ARAIHCHVIKFAVASAPYVSTGLVGAY 158
F+++M E N ++ SV+ C+ LQA + + CH IK
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY-------------- 181
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
F E+ E +L+ V ++K+ R +A +F ++ S +V CWN +
Sbjct: 182 -----------FFYEVVESALIDV------FSKNLRFEDAYKVFR--DSLSANVYCWNTI 222
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I +N LF +M +PD T +VL++C L L G+ + + V K
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV--IKC 280
Query: 279 GVE-VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
G E V V TA+VD+Y KCG + +A ++F I + VV+W M+ GY + AL +F
Sbjct: 281 GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGR 396
EM GV+ ++ T +V++ACG +V + ++ + K+G+ ++ + ++++ +
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA--AALISMYSK 398
Query: 397 AGRLE 401
+G ++
Sbjct: 399 SGDID 403
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
R G+D L L YS G L + +++R P + +S+I +S
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARA----IHCHVIKFAVASAPYVSTGLVGAYA 159
+ M+ ++F SS+L L + +H ++ K + + P V + L+ Y+
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + K F +++ L++ TA++ YA+HG+
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK------------------------- 733
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW-IHSYVGNHKN 278
NE L ++ M + +PD++T + VLS+C G +E + ++S V ++
Sbjct: 734 --------ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGI 785
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSE 330
E R +VD + G L +A +N+ + D + W +++ IHG E
Sbjct: 786 EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+V + +L+ Y GS+ DA K+FD I DVV+ N MI GY H EE+LR F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 341 GMGVKPSDVTFVAVLTACG--HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
+G + +++++ +V++AC + L S+ + +K GY +E ++++ +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSE-LVCCHTIKMGYFFYEVVE--SALIDVFSKNL 199
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKN 431
R E+ Y + R + W T++ ++N
Sbjct: 200 RFEDAYKVFRD-SLSANVYCWNTIIAGALRNQN 231
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 200/362 (55%), Gaps = 15/362 (4%)
Query: 65 SSVGHLHHSVTLFNRTPTPNVFLWTSIIHA----HSHSDQALSFYARMLAQPVEPNAFTF 120
SS G ++ +FN+ +P+ F W +I + H + L F M++ + + FTF
Sbjct: 63 SSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTF 122
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
V+ C +++ +H IK + + L+ Y + G S KVFD+M
Sbjct: 123 PFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPG 182
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
RS+VS T ML + +L A ++F M R+VV W MI Y +N P+E LFR
Sbjct: 183 RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM--RNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG--VEVRVGTALVDMYCK 294
+M + V+P+E T++ +L + QLG+L GRW+H Y HKNG ++ +GTAL+DMY K
Sbjct: 241 RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA--HKNGFVLDCFLGTALIDMYSK 298
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVA 353
CGSL DARK+FD + + + WNSMI +HG EEAL LF+EM V+P +TFV
Sbjct: 299 CGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
VL+AC ++G V G F M YG+ P EH CM+ LL +A +E+ +LV M +D
Sbjct: 359 VLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSD 418
Query: 414 PD 415
PD
Sbjct: 419 PD 420
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 129/325 (39%), Gaps = 70/325 (21%)
Query: 121 SSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
S L C N + IH +IK + + + L+ + G+ A VF+++ S
Sbjct: 24 SYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
+ M+ + + + REA LLF M M+
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILM--------------------------------MI 111
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ + + D+ T V+ +C ++ G +H +V L+D+Y KCG D
Sbjct: 112 SHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPD 171
Query: 300 DARKIFD-----NIVD--------------------------RDVVAWNSMIMGYAIHGY 328
RK+FD +IV R+VV+W +MI Y +
Sbjct: 172 SGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRR 231
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG-WEIFNLMKNGYGMEPKIEHF 387
+EA +LF M VKP++ T V +L A G +S G W KNG+ ++ +
Sbjct: 232 PDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG-- 289
Query: 388 GCMVNLLGRAGRLEEG---YDLVRG 409
++++ + G L++ +D+++G
Sbjct: 290 TALIDMYSKCGSLQDARKVFDVMQG 314
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 231/449 (51%), Gaps = 25/449 (5%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALS 103
+ G + + ++ L Y G +++ + +F P NV W S+I ++++ A+
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
+ M + V+ N +L C C + + + L G G D
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACG-------RCK----DIVTGKWFHGFLQGL---GFD 240
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+ KV +++ T+++ YAK G LR AR LF+GM R +V WN +I Y+
Sbjct: 241 PYFQSKV-----GFNVILATSLIDMYAKCGDLRTARYLFDGMP--ERTLVSWNSIITGYS 293
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
QNG E L +F ML + PD++T L+V+ + G + G+ IH+YV +
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA 353
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
+ ALV+MY K G + A+K F+++ +D +AW +I+G A HG+ EAL +F M G
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 344 -VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
P +T++ VL AC H GLV +G F M++ +G+EP +EH+GCMV++L RAGR EE
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
LV+ M P+ +WG LL C +H+N+ L + I + SG YVLLSNIYA
Sbjct: 474 AERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAK 533
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIE 491
+G W +R MK V+K G S +E
Sbjct: 534 AGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 52/411 (12%)
Query: 69 HLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLH 125
+L ++ ++F P+V++W S+I +S+S D+AL FY ML + P+ FTF VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 126 GC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVS 181
C ++Q +H V+K YVST L+ Y G+V +VF+++ +
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW---- 171
Query: 182 VTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAE 241
+VV W +I + N ++ + FR+M +
Sbjct: 172 -----------------------------NVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 242 KVRPDEITLLAVLSSCGQLGALESGRWIHSYVG--------NHKNGVEVRVGTALVDMYC 293
V+ +E ++ +L +CG+ + +G+W H ++ K G V + T+L+DMY
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
KCG L AR +FD + +R +V+WNS+I GY+ +G +EEAL +F +M +G+ P VTF++
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 354 VLTACGHSGLVSKGWEIFNLM-KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
V+ A G G I + K G+ + I +VN+ + G E ++
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI--VCALVNMYAKTGDAESAKKAFEDLEK 380
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAAS 463
D++ W ++ H + + I + + A+ L +YA S
Sbjct: 381 K-DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 219/395 (55%), Gaps = 39/395 (9%)
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAA----RAIHCHVIKFAVASAPYVSTGLV 155
+ + + ++ +E ++ + +SV+ C+ A +++HC+V+K ++ V L+
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLI 475
Query: 156 GAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCW 215
Y + GD+ A ++F EAD+ +V+ W
Sbjct: 476 DLYGKMGDLTVAWRMF---------------------------------CEADT-NVITW 501
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
N MI Y + + LF +M++E +P ITL+ +L +C G+LE G+ IH Y+
Sbjct: 502 NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE 561
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
++ + + + AL+DMY KCG L+ +R++FD +D V WN MI GY +HG E A+ L
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIAL 621
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
FD+M VKP+ TF+A+L+AC H+GLV +G ++F L + Y ++P ++H+ C+V+LL
Sbjct: 622 FDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLS 680
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
R+G LEE V M PD V+WGTLL +C H +G +AE ++ + + G Y++
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIM 740
Query: 456 LSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
L+N+Y+A+G W A + R +M+ SGV K G S++
Sbjct: 741 LANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 184/464 (39%), Gaps = 84/464 (18%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFY 105
G D + + YS G L + +F+ P +V WT+II H S+ L +
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 106 ARMLAQPVE---PNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVS------- 151
+M + + PN T C+ L+ R +H +K +AS+ +V
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 152 ------------------------TGLVGAYARGGDVFSAEKVFDEMSERSL-------- 179
T ++ + AR GD+ + +F EM + +
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 180 -------------------------------VSVTAMLTCYAKHGRLREARLLFEGMEAD 208
++L+ Y K L A LF + +
Sbjct: 336 CLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
WN M+ Y + +C+ LFRK+ + D + +V+SSC +GA+ G+
Sbjct: 396 GNKEA-WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+H YV + + V +L+D+Y K G L A ++F D +V+ WN+MI Y
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQ 513
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
SE+A+ LFD M KPS +T V +L AC ++G + +G I + E +
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETE-HEMNLSLSA 572
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNV 432
++++ + G LE+ +L D+V W ++ +H +V
Sbjct: 573 ALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDV 615
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 150/346 (43%), Gaps = 34/346 (9%)
Query: 28 LIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFL 87
L D+S S GL + + KL SY+S G + S +F+ ++FL
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 88 WTSIIHAH-SHSDQA--LSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAV 144
W SII AH S+ D A L F+ ML P+ FT V+ C A + HV F
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC----AELLWFHVGTFV- 147
Query: 145 ASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEG 204
GLV GG FD R+ + + Y+K G L++A L+F+
Sbjct: 148 -------HGLV--LKHGG--------FD----RNTAVGASFVYFYSKCGFLQDACLVFD- 185
Query: 205 MEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA---EKVRPDEITLLAVLSSCGQLG 261
E RDVV W +I + QNG L KM + + +P+ TL +C LG
Sbjct: 186 -EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 262 ALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIM 321
AL+ GR +H + + V +++ Y K G+ +A F + D D+ +W S+I
Sbjct: 245 ALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 322 GYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
A G EE+ +F EM G+ P V ++ G LV +G
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 124/280 (44%), Gaps = 42/280 (15%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTF 120
Y +G L + +F T NV W ++I ++ H S++A++ + RM+++ +P++ T
Sbjct: 478 YGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
++L C +L+ + IH ++ + +S L+ YA+ G + + ++FD ++
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 596
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+ V M++ Y HG + A LF+ ME
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEES---------------------------- 628
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
V+P T LA+LS+C G +E G+ + + + ++ + LVD+ + G
Sbjct: 629 -----DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSG 683
Query: 297 SLDDARK-IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
+L++A + D V W +++ HG E +R+
Sbjct: 684 NLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 211/385 (54%), Gaps = 33/385 (8%)
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
++L + PD + + SC L +LE + +H + K + ++ ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
S+ DA+++FD++VD+D+ +W+ M+ Y+ +G ++AL LF+EM G+KP++ TF+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC G + + + F+ MKN +G+ PK EH+ ++ +LG+ G L E +R + +P +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
W + RLH ++ L + + E ++ + + A N + +S
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK------------AVINKIPTPPPKSFK 453
Query: 477 KGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANG--YTPKTDL 534
+ +++ +RI EF +++ +E G Y P T
Sbjct: 454 E---------TNMVTSKSRILEF----------RNLTFYKDEAKEMAAKKGVVYVPDTRF 494
Query: 535 VLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITG 594
VLHDI +E KE +L HSE+LA+A+G+I T P T+ I+KNLRVC DCH+ +K+MSKI G
Sbjct: 495 VLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIG 554
Query: 595 RKIITRDRNRFHHFENGSCSCGDYW 619
R +I RD RFHHF++G CSCGDYW
Sbjct: 555 RVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 120 FSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
F S + +L+ ++ +H H ++ P ++ ++ + + A++VFD M ++
Sbjct: 243 FESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDK-- 300
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
D+ W++M+ Y+ NGM ++ L LF +M
Sbjct: 301 -------------------------------DMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL--VDMYCKCGS 297
++P+E T L V +C +G +E ++H +++G+ + L + + KCG
Sbjct: 330 KHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 298 LDDARK-IFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
L +A + I D + W +M +HG + L + E + V PS + T
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHG--DIDLEDYMEELMVDVDPSKAVINKIPT 446
Query: 357 A 357
Sbjct: 447 P 447
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 228/445 (51%), Gaps = 43/445 (9%)
Query: 55 ILNFKLQRSYSSVGHLH-HSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLA 110
+L+ KL +YS + HL S+++F P N+F W II S S +++ + RM
Sbjct: 67 VLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWR 126
Query: 111 QP-VEPNAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
+ V P+ FT +L C+ ++ IH +K +S+ +VS+ LV
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALV---------- 176
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
Y G+L AR LF+ M RD V + M Y Q
Sbjct: 177 ---------------------IMYVDMGKLLHARKLFDDMPV--RDSVLYTAMFGGYVQQ 213
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
G L +FR+M D + ++++L +CGQLGAL+ G+ +H + + + + +G
Sbjct: 214 GEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLG 273
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
A+ DMY KC LD A +F N+ RDV++W+S+I+GY + G + +LFDEM G++
Sbjct: 274 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE 333
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYD 405
P+ VTF+ VL+AC H GLV K W F LM+ Y + P+++H+ + + + RAG LEE
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEK 392
Query: 406 LVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGN 465
+ M PD + G +L C+++ NV +GE +A ++ + YV L+ +Y+A+G
Sbjct: 393 FLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGR 452
Query: 466 WVGAAKVRSLMKGSGVEKEPGCSII 490
+ A +R MK + K PGCS I
Sbjct: 453 FDEAESLRQWMKEKQISKVPGCSSI 477
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 237/455 (52%), Gaps = 50/455 (10%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEP 115
KL Y G + + +F+ P ++ +I A + + ++L F+ M ++
Sbjct: 56 KLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKL 115
Query: 116 NAFTFSSVLHGC-NL---QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+AF S+L NL + + IHC V+KF+ S ++ + L+ Y++ G+V +A KVF
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQ----- 224
++ E+ LV AM++ YA + + EA L + M+ DV+ WN +I ++
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEE 235
Query: 225 ------------------------------NGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
N + F++ML + P+ T++ +L
Sbjct: 236 KVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Query: 255 SSCGQLGALESGRWIHSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
+C L ++ G+ IH Y G +G V +AL+DMY KCG + +A +F +
Sbjct: 296 PACTTLAYMKHGKEIHGYSVVTGLEDHGF---VRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF 371
V +NSMI YA HG +++A+ LFD+M G K +TF A+LTAC H+GL G +F
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 372 NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKN 431
LM+N Y + P++EH+ CMV+LLGRAG+L E Y++++ M+ +PD +WG LL ACR H N
Sbjct: 413 LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Query: 432 VSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNW 466
+ L A+ + +SG +LL+++YA +G+W
Sbjct: 473 MELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 39/310 (12%)
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
R +H H++ +A ++ LV Y G V A KVFDEM +R + M+ A+
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR- 94
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLA 252
NG E L FR+M + ++ D + +
Sbjct: 95 --------------------------------NGYYQESLDFFREMYKDGLKLDAFIVPS 122
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD 312
+L + L E G+ IH V + + ++L+DMY K G + +ARK+F ++ ++D
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD 182
Query: 313 VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN 372
+V +N+MI GYA + ++EAL L +M +G+KP +T+ A+++ H K EI
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 373 LM-KNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRL 428
LM +GY +P + + +++ L + E+ +D + M T P+S TLL AC
Sbjct: 243 LMCLDGY--KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 429 HKNVSLGEEI 438
+ G+EI
Sbjct: 301 LAYMKHGKEI 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 266 GRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAI 325
GR +H+++ R+ LV Y +CG + DARK+FD + RD+ MI A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH------------------------- 360
+GY +E+L F EM G+K ++L A +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 361 -SGLV---SKGWEIFNLMKNGYGM-EPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---T 412
S L+ SK E+ N K + E + F M++ + +E +LV+ MK
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
PD + W L+ +N EI E +
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELM 244
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 219/440 (49%), Gaps = 44/440 (10%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y G + + +F+R +V WT +I+ ++ + AL M + V PNA T
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+S++ C + + +H ++ V S + T L+ YA+ V +VF S+
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
W+ +I QN + ++ L LF+
Sbjct: 383 YHTGP---------------------------------WSAIIAGCVQNELVSDALGLFK 409
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+M E V P+ TL ++L + L L IH Y+ + T LV +Y KCG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 297 SLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFV 352
+L+ A KIF+ I ++ DVV W ++I GY +HG AL++F EM GV P+++TF
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT 529
Query: 353 AVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
+ L AC HSGLV +G +F M Y + H+ C+V+LLGRAGRL+E Y+L+ +
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPF 589
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
+P S +WG LL AC H+NV LGE A + ++G YVLL+NIYAA G W KV
Sbjct: 590 EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKV 649
Query: 473 RSLMKGSGVEKEPGCSIIEV 492
RS+M+ G+ K+PG S IE+
Sbjct: 650 RSMMENVGLRKKPGHSTIEI 669
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 154/313 (49%), Gaps = 34/313 (10%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVE-- 114
L +Y+ GH+ ++ LF P ++ + +I + A+S + RM+++ V+
Sbjct: 55 LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV 114
Query: 115 PNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
P+ +T+ F +A + + +G G ++
Sbjct: 115 PDGYTYP--------------------FVAKAAGELKSMKLGLVVHG-------RILRSW 147
Query: 175 SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLL 234
R A+L Y G++ AR +F+ M+ +RDV+ WN MI Y +NG N+ L++
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMK--NRDVISWNTMISGYYRNGYMNDALMM 205
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F M+ E V D T++++L CG L LE GR +H V + G ++ V ALV+MY K
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG +D+AR +FD + RDV+ W MI GY G E AL L M GV+P+ VT ++
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 355 LTACGHSGLVSKG 367
++ CG + V+ G
Sbjct: 326 VSVCGDALKVNDG 338
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 38/298 (12%)
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
++ +A+HCHVI S +ST L YA G + A K+F+EM + SL+S
Sbjct: 30 SISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLS------ 82
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR--P 245
+N++I Y + G+ ++ + +F +M++E V+ P
Sbjct: 83 ---------------------------YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVP 115
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIF 305
D T V + G+L +++ G +H + G + V AL+ MY G ++ AR +F
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
D + +RDV++WN+MI GY +GY +AL +FD M V T V++L CGH +
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
G + L++ + KIE +VN+ + GR++E + M+ D + W ++
Sbjct: 236 MGRNVHKLVEEKR-LGDKIEVKNALVNMYLKCGRMDEARFVFDRMER-RDVITWTCMI 291
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 169/377 (44%), Gaps = 46/377 (12%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSII---HAHSHSDQALSFYARMLAQPVEPNAFTF 120
Y + G + + +F+ +V W ++I + + + + AL + M+ + V+ + T
Sbjct: 162 YMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATI 221
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S+L C +L+ R +H + +++ D++
Sbjct: 222 VSMLPVCGHLKDLEMGRNVH--------------------------KLVEEKRLGDKIEV 255
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
++ A++ Y K GR+ EAR +F+ ME RDV+ W MI+ Y ++G L L R
Sbjct: 256 KN-----ALVNMYLKCGRMDEARFVFDRME--RRDVITWTCMINGYTEDGDVENALELCR 308
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M E VRP+ +T+ +++S CG + G+ +H + + ++ + T+L+ MY KC
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+D ++F W+++I G + +AL LF M V+P+ T ++L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 357 ACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---T 412
A + + I L K G+ ++ +V++ + G LE + + G++
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGF--MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 413 DPDSVLWGTLLWACRLH 429
D VLWG L+ +H
Sbjct: 487 SKDVVLWGALISGYGMH 503
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 215/393 (54%), Gaps = 20/393 (5%)
Query: 112 PVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTG----LVGAYARGGDVFSA 167
P +A TFS++++G + +A+ + + S V+ + A + GD+ A
Sbjct: 187 PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 168 EKV----FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
E + L +TA++ Y K G + AR +F+ A +DVV WN MID+YA
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDC--AIRKDVVTWNCMIDQYA 304
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
+ G+ EC+ L R+M EK++P+ T + +LSSC A GR + + + ++
Sbjct: 305 KTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI 364
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM---- 339
+GTALVDMY K G L+ A +IF+ + D+DV +W +MI GY HG + EA+ LF++M
Sbjct: 365 LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEEN 424
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
C V+P+++TF+ VL AC H GLV +G F M Y PK+EH+GC+V+LLGRAG+
Sbjct: 425 C--KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQ 482
Query: 400 LEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNI 459
LEE Y+L+R + DS W LL ACR++ N LGE + + +LL+
Sbjct: 483 LEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGT 542
Query: 460 YAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEV 492
+A +GN + L KG KE G S IE+
Sbjct: 543 HAVAGNPEKSLD-NELNKG---RKEAGYSAIEI 571
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 151/378 (39%), Gaps = 62/378 (16%)
Query: 195 LREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
+R A +FE + ++ +N MI Y+ + P +F ++ A+ + D + + L
Sbjct: 75 IRYASSIFE--HVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTL 132
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-DV 313
SC + + G +H V + AL+ YC CG + DARK+FD + D
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 314 VAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC--------------- 358
V +++++ GY AL LF M V + T ++ L+A
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVL 252
Query: 359 --------------------GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
G +G +S IF+ + + + CM++ + G
Sbjct: 253 CIKIGLDLDLHLITALIGMYGKTGGISSARRIFDC-----AIRKDVVTWNCMIDQYAKTG 307
Query: 399 RLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTY-V 454
LEE L+R MK + P+S + LL +C + +G +A+ + +A
Sbjct: 308 LLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGT 367
Query: 455 LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQD--- 511
L ++YA G A ++ + MK V+ I+G H +++
Sbjct: 368 ALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTA------------MISGYGAHGLAREAVT 415
Query: 512 IYLMLEEMNCRLKANGYT 529
++ +EE NC+++ N T
Sbjct: 416 LFNKMEEENCKVRPNEIT 433
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 230/451 (50%), Gaps = 42/451 (9%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ G + + +++ YSS + +F ++ W ++I +++ + A+S
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 104 FYARMLAQPVEPNAFTFSSVL-HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
Y RM V+P+ FTF S+L +L + +IKF ++S +S L+ AY++ G
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
+ A+ +F ERSL ++++ WN +I +
Sbjct: 436 QIEKADLLF----ERSL-----------------------------RKNLISWNAIISGF 462
Query: 223 AQNGMPNECLLLFRKMLAEKVR--PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
NG P E L F +L +VR PD TL +LS C +L G H+YV H
Sbjct: 463 YHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 522
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
E +G AL++MY +CG++ ++ ++F+ + ++DVV+WNS+I Y+ HG E A+ + M
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582
Query: 341 GMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGR 399
G V P TF AVL+AC H+GLV +G EIFN M +G+ ++HF C+V+LLGRAG
Sbjct: 583 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 642
Query: 400 LEEGYDLVR-GMKTDPDSV-LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLS 457
L+E LV+ KT V +W L AC H ++ LG+ +A+ ++ YV LS
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 702
Query: 458 NIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
NIYA +G W A + R + G K+ GCS
Sbjct: 703 NIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 16/266 (6%)
Query: 135 IHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGR 194
+HC+ I+ + +VS L+ Y R G++ S +K FDE+ E + S T +L+ K G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 195 LREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
+ A +F+ M + DV WN MI ++G + LFR+M VR D+ +L
Sbjct: 139 IEYAFEVFDKM-PERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD--NIVDRD 312
S C G+L+ G+ +HS V + V AL+ MY C + DA +F+ ++ RD
Sbjct: 198 SMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 313 VVAWNSMIMGYAIHGYS-EEALRLFDEMCGMGVKPSDVTFVAVLTAC-----GHS--GLV 364
V +N +I G A G+ +E+L +F +M ++P+D+TFV+V+ +C GH GL
Sbjct: 257 QVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLA 314
Query: 365 SK-GWEIFNLMKNG-YGMEPKIEHFG 388
K G+E + L+ N M E FG
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFG 340
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 178/393 (45%), Gaps = 34/393 (8%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALS 103
R GL H ++ L Y +G+L F+ P+V+ WT+++ A + A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC--------NLQAARAIHCHVI---KFAVASAPYVST 152
+ +M P + +++++ GC +++ R +H + KF A+ +S
Sbjct: 145 VFDKM---PERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT--ILSM 199
Query: 153 GLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDV 212
G+ G V S S+V+ A++T Y + +A L+FE + RD
Sbjct: 200 CDYGSLDFGKQVHSLVIKAGFFIASSVVN--ALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 213 VCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY 272
V +NV+ID A +E LL+FRKML +RP ++T ++V+ SC G +H
Sbjct: 258 VTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGL 313
Query: 273 VGNHKNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
K G E V A + MY A K+F+++ ++D+V WN+MI Y +
Sbjct: 314 A--IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
A+ ++ M +GVKP + TF ++L + L E+ +G+ KIE +
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNAL 427
Query: 391 VNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
++ + G++E+ DL+ + + W ++
Sbjct: 428 ISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 208/392 (53%), Gaps = 7/392 (1%)
Query: 97 HSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVG 156
HS AL A + + ++ A F VL G ++H H +K S P+V L+
Sbjct: 39 HSSFALPLDAHVFSLALKSCAAAFRPVLGG-------SVHAHSVKSNFLSNPFVGCALLD 91
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
Y + V A K+FDE+ +R+ V AM++ Y G+++EA L+E M+ +
Sbjct: 92 MYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNA 151
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
++ + +RKM+ + +P+ ITLLA++S+C +GA + IHSY +
Sbjct: 152 IIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRN 211
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
++ + LV+ Y +CGS+ + +FD++ DRDVVAW+S+I YA+HG +E AL+ F
Sbjct: 212 LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTF 271
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR 396
EM V P D+ F+ VL AC H+GL + F M+ YG+ +H+ C+V++L R
Sbjct: 272 QEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSR 331
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLL 456
GR EE Y +++ M P + WG LL ACR + + L E A +L + YVLL
Sbjct: 332 VGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLL 391
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
IY + G A ++R MK SGV+ PG S
Sbjct: 392 GKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 121/310 (39%), Gaps = 75/310 (24%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH--------------- 97
+P + L Y + H+ LF+ P N +W ++I ++H
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 98 ---------------------SDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAA---- 132
S +A+ FY +M+ +PN T +++ C+ A
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
+ IH + + + P + +GLV AY R G + + VFD M +R +V+ +++++ YA H
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLA 252
G A F+ ME LA+ V PD+I L
Sbjct: 262 GDAESALKTFQEME--------------------------------LAK-VTPDDIAFLN 288
Query: 253 VLSSCGQLG-ALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
VL +C G A E+ + G++ + LVD+ + G ++A K+ + ++
Sbjct: 289 VLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
Query: 312 DVV-AWNSMI 320
W +++
Sbjct: 349 PTAKTWGALL 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 110/290 (37%), Gaps = 79/290 (27%)
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
L+S+T L+ YA G +A LF M + + + +D + + C FR +
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSS------FALPLDAHVFSLALKSCAAAFRPV 65
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
L G +H++ VG AL+DMY KC S+
Sbjct: 66 L--------------------------GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSV 99
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG--------------- 343
ARK+FD I R+ V WN+MI Y G +EA+ L++ M M
Sbjct: 100 SHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT 159
Query: 344 ------------------VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYG------ 379
KP+ +T +A+++AC G F L+K +
Sbjct: 160 EDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG-------AFRLIKEIHSYAFRNL 212
Query: 380 MEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
+EP + +V GR G + LV D D V W +L+ A LH
Sbjct: 213 IEPHPQLKSGLVEAYGRCGSIVY-VQLVFDSMEDRDVVAWSSLISAYALH 261
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 243/490 (49%), Gaps = 52/490 (10%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARML--AQPVEPNAF 118
Y G + + LF P N+ WT++I + ++ +AL + M V PN
Sbjct: 241 YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGE 300
Query: 119 TFSSVLHGCN------LQAARAIHCHVIKFAVASAP------------YVSTGLVGA--- 157
T S+ + C + +H VI + Y S+GL+ +
Sbjct: 301 TLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQS 360
Query: 158 -----------------YARGGDVFSAEKVFDEM-SERSLVSVTAMLTCYAKHGRLREAR 199
Y + GD+ AE +F+ + S VS T+M+ Y + G + A
Sbjct: 361 LLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAF 420
Query: 200 LLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQ 259
LF+ + +D V W VMI QN + E L M+ ++P T +LSS G
Sbjct: 421 GLFQKLH--DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 260 LGALESGRWIHSYVGNHKN--GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWN 317
L+ G+ IH + ++ + +LV MY KCG+++DA +IF +V +D V+WN
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 318 SMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG 377
SMIMG + HG +++AL LF EM G KP+ VTF+ VL+AC HSGL+++G E+F MK
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKET 598
Query: 378 YGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE 437
Y ++P I+H+ M++LLGRAG+L+E + + + PD ++G LL C L+ E
Sbjct: 599 YSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEG 658
Query: 438 IAE----FILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVN 493
IAE +L + ++ +V L N+YA G ++R M GV+K PGCS + VN
Sbjct: 659 IAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 718
Query: 494 NRIHEFIAGD 503
R + F++GD
Sbjct: 719 GRANVFLSGD 728
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 53/265 (20%)
Query: 152 TGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRD 211
T L+ YA+ G + A +F+ M ER++V+ AMLT Y K R+ EA LF M ++
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM---PKN 137
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR---- 267
VV W VM+ +G + + LF +M V ++ +++ + G +E +
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 268 ---------W---IHSYVGNHKNGVE-------------VRVGTALVDMYCKCGSLDDAR 302
W I Y+ N +G+E V T++V YC+ G + +A
Sbjct: 194 AMPSRDVVSWNAMIKGYIEN--DGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 303 KIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG--MGVKPSDVTFVAVLTACG- 359
++F + +R++V+W +MI G+A + EAL LF EM V P+ T +++ ACG
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 360 ------------HSGLVSKGWEIFN 372
H+ ++S GWE +
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVD 336
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 176/401 (43%), Gaps = 56/401 (13%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVL 124
G +V LF+ P NV W +++ + ++A + M ++ V +
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYI 211
Query: 125 HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTA 184
++ A+ + + + V + T +V Y R GDV A ++F EM ER++VS TA
Sbjct: 212 ENDGMEEAKLLFGDMSEKNVVTW----TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWN---VMIDEYAQNGMPNECLLLFRKMLAE 241
M++ +A + REA +LF M+ D D V N ++ YA G+ E FR+ L E
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDV-DAVSPNGETLISLAYACGGLGVE----FRR-LGE 321
Query: 242 KVRPDEI---------------TLLAVLSSCGQLGALES-----------GRWIHSYVGN 275
++ I +L+ + +S G + + +S I+ Y+ N
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 276 ----HKNGVEVRVG--------TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGY 323
+ RV T+++D Y + G + A +F + D+D V W MI G
Sbjct: 382 GDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGL 441
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGYGMEP 382
+ EA L +M G+KP + T+ +L++ G + + +G I ++ K +P
Sbjct: 442 VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDP 501
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ +V++ + G +E+ Y++ M D+V W +++
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 46/182 (25%)
Query: 162 GDVFSAEKVFDEMSERS----LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
G + A + D++ +R +V T++L+ YAK G L EAR+LFE M R++V N
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP--ERNIVTCNA 113
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
M+ Y + NE LFR+M P + W
Sbjct: 114 MLTGYVKCRRMNEAWTLFREM------PKNVV-----------------SW--------- 141
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
T ++ C G +DA ++FD + +R+VV+WN+++ G +G E+A ++FD
Sbjct: 142 --------TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 338 EM 339
M
Sbjct: 194 AM 195
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 223/399 (55%), Gaps = 11/399 (2%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
+L+ + MLA V+PN TF S++ ++ A+H +K P+V T V
Sbjct: 70 SLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVR 129
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
Y GD+ S+ K+FD++ +V+ ++L ++G + A F+ M DVV W
Sbjct: 130 FYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVT--DVVSWT 187
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEK---VRPDEITLLAVLSSCGQL--GALESGRWIHS 271
+I+ +++ G+ + L++F +M+ + + P+E T ++VLSSC G + G+ IH
Sbjct: 188 TVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHG 247
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEE 331
YV + + + +GTAL+DMY K G L+ A IFD I D+ V AWN++I A +G ++
Sbjct: 248 YVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQ 307
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMV 391
AL +F+ M V P+ +T +A+LTAC S LV G ++F+ + + Y + P EH+GC+V
Sbjct: 308 ALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG 451
+L+GRAG L + + ++ + +PD+ + G LL AC++H+N LG + + ++ G
Sbjct: 368 DLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCG 427
Query: 452 TYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
YV LS A NW A K+R M +G+ K P S++
Sbjct: 428 QYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 46/281 (16%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N +I Y G L LF MLA V+P+ +T +++ + ++ G +H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD------------------------ 310
+ V T+ V Y + G L+ +RK+FD+I++
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 311 -------RDVVAWNSMIMGYAIHGYSEEALRLFDEMCG---MGVKPSDVTFVAVLTACGH 360
DVV+W ++I G++ G +AL +F EM + P++ TFV+VL++C +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 361 --SGLVSKGWEIFNLMKNGYGMEPKI----EHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
G + G +I +GY M +I ++++ G+AG LE + ++ D
Sbjct: 234 FDQGGIRLGKQI-----HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR-DK 287
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVL 455
W ++ A + E+ E + S + +G +L
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLL 328
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 47/289 (16%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQP---VEPNAFTFS 121
G + ++ F R P +V WT++I+ S +AL + M+ + PN TF
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 122 SVLHGC------NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
SVL C ++ + IH +V+ + + T L+ Y + GD+ A +FD++
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
++ + + A+++ A +GR P + L +F
Sbjct: 286 DKKVCAWNAIISALASNGR---------------------------------PKQALEMF 312
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA-LVDMYCK 294
M + V P+ ITLLA+L++C + ++ G + S + + + +VD+ +
Sbjct: 313 EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGR 372
Query: 295 CGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
G L DA ++ + D +++ IH +E + ++ G+
Sbjct: 373 AGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGL 421
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 236/449 (52%), Gaps = 14/449 (3%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEP 115
+L +S S G ++V+++ ++ + A+ S QAL FY +L P
Sbjct: 59 RLLKSSSRFGDSSYTVSIYRSIG--KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVP 116
Query: 116 NAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
+++TF S++ C + + + H IK V L+ Y G + A+K+F
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
E+ +R +VS +++ ++G + A LF+ E ++++ WN+MI Y P
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD--EMPDKNIISWNIMISAYLGANNPGVS 234
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
+ LFR+M+ + +E TL+ +L++CG+ L+ GR +H+ + V + TAL+DM
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 292 YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
Y KC + AR+IFD++ R+ V WN MI+ + +HG E L LF+ M ++P +VTF
Sbjct: 295 YGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTF 354
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
V VL C +GLVS+G ++LM + + ++P H CM NL AG EE + ++ +
Sbjct: 355 VGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLP 414
Query: 412 TD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVG 468
+ P+S W LL + R N +LGE IA+ ++ + + Y LL NIY+ +G W
Sbjct: 415 DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 474
Query: 469 AAKVRSLMKGSGVEKEPGCSIIEVNNRIH 497
+VR ++K + + PGC ++++ +H
Sbjct: 475 VNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 115/301 (38%), Gaps = 75/301 (24%)
Query: 54 PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSII----------HAHSHSDQ--- 100
P+ N L Y+ G L + LF P ++ W SII AH D+
Sbjct: 154 PVQN-SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
Query: 101 ---------------------ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
++S + M+ + N T +L+ C L+ R++
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRL 195
H +I+ + S+ + T L+ Y + +V A ++FD +S R+ V+ M+ + HGR
Sbjct: 273 HASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR- 331
Query: 196 REARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLS 255
P L LF M+ +RPDE+T + VL
Sbjct: 332 --------------------------------PEGGLELFEAMINGMLRPDEVTFVGVLC 359
Query: 256 SCGQLGALESGRWIHSYVGNHKNGVEVRVGT--ALVDMYCKCGSLDDARKIFDNIVDRDV 313
C + G + G+ +S + + ++ G + ++Y G ++A + N+ D DV
Sbjct: 360 GCARAGLVSQGQSYYSLMVDEFQ-IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Query: 314 V 314
Sbjct: 419 T 419
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 231/448 (51%), Gaps = 41/448 (9%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
GL I + ++YS G + + LF P P++ LW +I + D+ ++ +
Sbjct: 136 GLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF 195
Query: 106 ARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + +PN +T ++ G L A ++H +K + S YV LV Y+R
Sbjct: 196 NLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
+ SA VF+ +SE LV+ ++++T Y++ G +
Sbjct: 256 MCIASACSVFNSISEPDLVACSSLITGYSRCGNHK------------------------- 290
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
E L LF ++ +PD + + VL SC +L SG+ +HSYV ++
Sbjct: 291 --------EALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD 342
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
++V +AL+DMY KCG L A +F I ++++V++NS+I+G +HG++ A F E+
Sbjct: 343 IKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILE 402
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
MG+ P ++TF A+L C HSGL++KG EIF MK+ +G+EP+ EH+ MV L+G AG+LE
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLE 462
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTY-VLLSNIY 460
E ++ V ++ DS + G LL C +H+N L E +AE I + Y V+LSN+Y
Sbjct: 463 EAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVY 522
Query: 461 AASGNWVGAAKVRSLMKGSGVEKEPGCS 488
A G W ++R + S K PG S
Sbjct: 523 ARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 172/401 (42%), Gaps = 42/401 (10%)
Query: 54 PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLA 110
P +L R Y+ L + LF+ P +VFLW SII A++ + Q LS ++++L
Sbjct: 40 PYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILR 99
Query: 111 QPVEPNAFTFSSVLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFS 166
P+ FT++ + G + + R IH I + + +V AY++ G +
Sbjct: 100 SDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVE 159
Query: 167 AEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNG 226
A K+F + + D+ WNVMI Y G
Sbjct: 160 ASKLFCSIPD---------------------------------PDLALWNVMILGYGCCG 186
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT 286
++ + LF M +P+ T++A+ S L +H++ VG
Sbjct: 187 FWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGC 246
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
ALV+MY +C + A +F++I + D+VA +S+I GY+ G +EAL LF E+ G KP
Sbjct: 247 ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP 306
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
V VL +C G E+ + + G+E I+ ++++ + G L+ L
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 407 VRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL 447
G+ + + V + +L+ LH S E IL L
Sbjct: 366 FAGIP-EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGL 405
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 2/155 (1%)
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+HS+V K + T L Y L ARK+FD +R V WNS+I YA
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
L LF ++ +P + T+ + S +KG + + G+
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSES-FDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+V +AG + E L + DPD LW ++
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMI 179
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 212/411 (51%), Gaps = 34/411 (8%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P FLW +I+ + H A+ Y M+ V P+ ++ V+ +AA IH
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI-----KAAVQIHDFT 134
Query: 140 IKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREAR 199
+ + S V G VG DE E + +T Y K G AR
Sbjct: 135 LGKELHSVA-VRLGFVG---------------DEFCE------SGFITLYCKAGEFENAR 172
Query: 200 LLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQ 259
+F+ E R + WN +I G NE + +F M + PD+ T+++V +SCG
Sbjct: 173 KVFD--ENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 260 LGALESGRWIHSYVGNHKN--GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWN 317
LG L +H V K ++ + +L+DMY KCG +D A IF+ + R+VV+W+
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 318 SMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG 377
SMI+GYA +G + EAL F +M GV+P+ +TFV VL+AC H GLV +G F +MK+
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 378 YGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEE 437
+ +EP + H+GC+V+LL R G+L+E +V M P+ ++WG L+ C +V + E
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 438 IAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCS 488
+A +++ + G YV+L+N+YA G W +VR LMK V K P S
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 220/434 (50%), Gaps = 49/434 (11%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPT--PNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPV 113
KL R Y+S G+ + +F+R + F W S+I ++ Q A++ Y +M V
Sbjct: 132 KLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGV 191
Query: 114 EPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEK 169
+P+ FTF VL C ++Q AIH ++K YV LV YA+ GD+ A
Sbjct: 192 KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 170 VFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
VFD + + VS +MLT Y HG L EA
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEA------------------------------- 280
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
L +FR M+ + PD++ + +VL+ ++ + + GR +H +V E+ V AL+
Sbjct: 281 --LDIFRLMVQNGIEPDKVAISSVLA---RVLSFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
+Y K G L A IFD +++RD V+WN++I + H + L+ F++M KP +
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGI 392
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL-VR 408
TFV+VL+ C ++G+V G +F+LM YG++PK+EH+ CMVNL GRAG +EE Y + V+
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
Query: 409 GMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVG 468
M + +WG LL+AC LH N +GE A+ + + + LL IY+ +
Sbjct: 453 EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Query: 469 AAKVRSLMKGSGVE 482
+VR +M G+E
Sbjct: 513 VERVRQMMVDRGLE 526
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
++L +C L A++ G +H + + + + + LV +Y CG + A ++FD + R
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 312 DV--VAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
D AWNS+I GYA G E+A+ L+ +M GVKP TF VL ACG G V G
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 370 IF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
I +L+K G+G + + +V + + G + + + V M D V W ++L
Sbjct: 217 IHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARN-VFDMIPHKDYVSWNSML 268
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 228/439 (51%), Gaps = 45/439 (10%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTF 120
Y+ G + + F+ ++ W ++I A++ +D + S + ML + +P+ FTF
Sbjct: 158 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF 217
Query: 121 SSVLHG-----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
S+L C L+ +H IK + + LV AY + G + +A K+ +
Sbjct: 218 GSLLRASIVVKC-LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK 276
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+R L+S TA++T +++ QN ++ +F
Sbjct: 277 KRDLLSCTALITGFSQ--------------------------------QNNCTSDAFDIF 304
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKNGVEVRVGTALVDMYCK 294
+ M+ K + DE+ + ++L C + ++ GR IH + + + + +V +G +L+DMY K
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAK 364
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
G ++DA F+ + ++DV +W S+I GY HG E+A+ L++ M +KP+DVTF+++
Sbjct: 365 SGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSL 424
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK--T 412
L+AC H+G GW+I++ M N +G+E + EH C++++L R+G LEE Y L+R +
Sbjct: 425 LSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIV 484
Query: 413 DPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
S WG L ACR H NV L + A +LS Y+ L+++YAA+G W A
Sbjct: 485 SLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNT 544
Query: 473 RSLMKGSG-VEKEPGCSII 490
R LMK SG K PG S++
Sbjct: 545 RKLMKESGSCNKAPGYSLV 563
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 174/391 (44%), Gaps = 69/391 (17%)
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
++ Y K G ++ AR LF+ + RDVV W MI +++ G + LLLF++M E V+
Sbjct: 53 LIDLYLKQGDVKHARKLFDRIS--KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI 304
++ T +VL SC LG L+ G IH V + V +AL+ +Y +CG +++AR
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
FD++ +RD+V+WN+MI GY + ++ + LF M G KP TF ++L A +V
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA----SIV 226
Query: 365 SKGWEIFN-----LMKNGYGMEPKIEHFGCMVNL------LGRAGRLEEGY--------- 404
K EI + +K G+G + +VN L A +L EG
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSAL--IRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCT 284
Query: 405 ---------------------DLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFIL 443
D++R MKT D V+ ++L C +V++G +I F L
Sbjct: 285 ALITGFSQQNNCTSDAFDIFKDMIR-MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 444 SHNLASSGTYV--LLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIA 501
+ + L ++YA SG A MK V IA
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS------------LIA 391
Query: 502 GDLRH---PKSQDIYLMLEEMNCRLKANGYT 529
G RH K+ D+Y +E R+K N T
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHE--RIKPNDVT 420
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 156/377 (41%), Gaps = 44/377 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS----HSDQALSFYARMLAQPVEPNAFT 119
Y G + H+ LF+R +V WT++I S H D AL + M + V+ N FT
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPD-ALLLFKEMHREDVKANQFT 115
Query: 120 FSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+ SVL C L+ IH V K A V + L+ YAR G + A FD M
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
ER LVS WN MID Y N + LF
Sbjct: 176 ERDLVS---------------------------------WNAMIDGYTANACADTSFSLF 202
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+ ML E +PD T ++L + + LE +H G + +LV+ Y KC
Sbjct: 203 QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKC 262
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY-SEEALRLFDEMCGMGVKPSDVTFVAV 354
GSL +A K+ + RD+++ ++I G++ + +A +F +M M K +V ++
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSM 322
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L C V+ G +I + + ++++ ++G +E+ MK +
Sbjct: 323 LKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EK 381
Query: 415 DSVLWGTLLWACRLHKN 431
D W +L+ H N
Sbjct: 382 DVRSWTSLIAGYGRHGN 398
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 221/427 (51%), Gaps = 46/427 (10%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSD---QALS-FYARMLAQPVEPNAFTFSSVLHGCN--- 128
+F+ P P+V WT+++ A S +D +AL FYA + + P+ TF +VL C
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 129 -LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLT 187
L+ + IH +I + S ++V +++L
Sbjct: 280 RLKQGKEIHGKLITNGIGS-------------------------------NVVVESSLLD 308
Query: 188 CYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
Y K G +REAR +F GM ++ V W+ ++ Y QNG + + +FR+M EK D
Sbjct: 309 MYGKCGSVREARQVFNGM--SKKNSVSWSALLGGYCQNGEHEKAIEIFREM-EEK---DL 362
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
VL +C L A+ G+ IH V V +AL+D+Y K G +D A +++
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
+ R+++ WN+M+ A +G EEA+ F++M G+KP ++F+A+LTACGH+G+V +G
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 368 WEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACR 427
F LM YG++P EH+ CM++LLGRAG EE +L+ + D+ LWG LL C
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 428 LHKNVS-LGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPG 486
+ + S + E IA+ ++ +YVLLSN+Y A G A +R LM GV K G
Sbjct: 543 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Query: 487 CSIIEVN 493
S I+ +
Sbjct: 603 QSWIDAH 609
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 171/377 (45%), Gaps = 54/377 (14%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
+F+ + WTS++ + + AL + M++ ++ N FT SS + C+
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
++ R H VI ++S+ L Y + A +VFDEM E
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEP----------- 227
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK-VRPDE 247
DV+CW ++ +++N + E L LF M K + PD
Sbjct: 228 ----------------------DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDG 265
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
T VL++CG L L+ G+ IH + + G V V ++L+DMY KCGS+ +AR++F+
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV-TFVAVLTACGHSGLVSK 366
+ ++ V+W++++ GY +G E+A+ +F EM + D+ F VL AC V
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREM-----EEKDLYCFGTVLKACAGLAAVRL 380
Query: 367 GWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA 425
G EI ++ G +E +++L G++G ++ + M + + W +L A
Sbjct: 381 GKEIHGQYVRRGCFGNVIVE--SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Query: 426 CRLHKNVSLGEEIAEFI 442
L +N GEE F
Sbjct: 438 --LAQN-GRGEEAVSFF 451
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 120/284 (42%), Gaps = 52/284 (18%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
G+ + ++ L Y G + + +FN N W++++ + + ++A+ +
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNLQAA----RAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M E + + F +VL C AA + IH ++ V + L+ Y +
Sbjct: 355 REM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 410
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
G + SA +V+ +MS R++++ AML+ A++GR EA
Sbjct: 411 GCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA----------------------- 447
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
+ F M+ + ++PD I+ +A+L++CG G ++ GR +Y
Sbjct: 448 ----------VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR---NYFVLMAKSYG 494
Query: 282 VRVGT----ALVDMYCKCGSLDDARKIFDNIVDR-DVVAWNSMI 320
++ GT ++D+ + G ++A + + R D W ++
Sbjct: 495 IKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I E + G E + + + ++ ++L +C ++ + G H++V K+
Sbjct: 33 ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV--VKS 90
Query: 279 GVEV--RVGTALVDMYCKCG-SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
G+E VG +L+ +Y K G + + R++FD +D ++W SM+ GY +AL +
Sbjct: 91 GLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 336 FDEMCGMGVKPSDVTFVAVLTACG-----------HSGLVSKGWE----IFNLMKNGYGM 380
F EM G+ ++ T + + AC H +++ G+E I + + YG+
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGV 210
Query: 381 ---------------EPKIEHFGCMVNLLGRAGRLEEG----YDLVRGMKTDPDSVLWGT 421
EP + + +++ + EE Y + RG PD +GT
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASS 450
+L AC + + G+EI ++++ + S+
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSN 299
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 184/324 (56%), Gaps = 18/324 (5%)
Query: 183 TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ-----NGMPNECLLLFRK 237
T +L YAK+G LR AR +F+ E R V WN MI Y N + ++LFR+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFD--EMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRR 208
Query: 238 M--LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN--HKNGVEVRVGTALVDMYC 293
VRP + T++ VLS+ Q G LE G +H Y+ V+V +GTALVDMY
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
KCG L++A +F+ + ++V W SM G A++G E L + M G+KP+++TF +
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
+L+A H GLV +G E+F MK +G+ P IEH+GC+V+LLG+AGR++E Y + M
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 414 PDSVLWGTLLWACRLHKNVSLGEEIAEFILS---HNLASSGT----YVLLSNIYAASGNW 466
PD++L +L AC ++ +GEEI + +L + SG+ YV LSN+ A G W
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKW 448
Query: 467 VGAAKVRSLMKGSGVEKEPGCSII 490
V K+R MK ++ PG S +
Sbjct: 449 VEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 194/369 (52%), Gaps = 33/369 (8%)
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGM-------- 205
++ AY + GDV SA +FD+M +R +S M+ Y R+ +A LF M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW 346
Query: 206 ---------------------EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
+ + V WN +I Y +N E + LF +M E +
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV-EVRVGTALVDMYCKCGSLDDARK 303
PD TL ++LS+ L L G +H V K + +V V AL+ MY +CG + ++R+
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVV--KTVIPDVPVHNALITMYSRCGEIMESRR 464
Query: 304 IFDNI-VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
IFD + + R+V+ WN+MI GYA HG + EAL LF M G+ PS +TFV+VL AC H+G
Sbjct: 465 IFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL 422
LV + F M + Y +EP++EH+ +VN+ G+ EE ++ M +PD +WG L
Sbjct: 525 LVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGAL 584
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
L ACR++ NV L AE + SS YVLL N+YA G W A++VR M+ ++
Sbjct: 585 LDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIK 644
Query: 483 KEPGCSIIE 491
KE G S ++
Sbjct: 645 KERGSSWVD 653
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 107/236 (45%), Gaps = 50/236 (21%)
Query: 151 STGLVGAYARGGDVF--SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD 208
+T + G + GG F A K+FDEM R S M++ YAK+ R+ EA LLFE M
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP-- 163
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSS---------CGQ 259
R+ V W+ MI + QNG + ++LFRKM + P + ++ + GQ
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 260 LGALESGR--WIHSY----VGNHKNGVEVRVGTALVDM---------------------- 291
G+L SGR +++Y VG + G +V L D
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRG-QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 292 --------YCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
Y K G + AR +FD + DRD ++WN+MI GY E+A LF EM
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 152/392 (38%), Gaps = 67/392 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y+ + ++ LF + P N W+++I + D A+ + +M + P
Sbjct: 146 YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV 205
Query: 121 SSVLHGCNLQAARAIHCHVIKFAVASAP--YVSTGLVGAYARGGDVFSAEKVFDEMSE-- 176
+ ++ L A + Y L+ Y + G V +A +FD++ +
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLC 265
Query: 177 -------------RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
+++VS +M+ Y K G + ARLLF+ M+ RD + WN MID Y
Sbjct: 266 GDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK--DRDTISWNTMIDGYV 323
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR 283
+ LF +M R HS+
Sbjct: 324 HVSRMEDAFALFSEM--------------------------PNRDAHSW----------- 346
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
+V Y G+++ AR F+ ++ V+WNS+I Y + +EA+ LF M G
Sbjct: 347 --NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 344 VKPSDVTFVAVLTACGHSGLVS--KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
KP T ++L+A +GLV+ G ++ ++ + P + ++ + R G +
Sbjct: 405 EKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVK--TVIPDVPVHNALITMYSRCGEIM 460
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVS 433
E + MK + + W ++ H N S
Sbjct: 461 ESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 44/267 (16%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y+SVG++ + F +TP + W SII A+ + +A+ + RM + +P+ T
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 121 SSVLHG----CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS- 175
+S+L NL+ +H V+K + P V L+ Y+R G++ + ++FDEM
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+R +++ AM+ YA HG EA LF M++ NG
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKS-----------------NG--------- 505
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGR-WIHSYVGNHKNGVEVRVGTALVDMYCK 294
+ P IT ++VL++C G ++ + S + +K ++ ++LV++
Sbjct: 506 -------IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 295 CGSLDDARKIFDNI-VDRDVVAWNSMI 320
G ++A I ++ + D W +++
Sbjct: 559 QGQFEEAMYIITSMPFEPDKTVWGALL 585
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 48/187 (25%)
Query: 191 KHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
+ G + EAR +FE +EA R+ V WN MI Y + N+ LF M + D +T
Sbjct: 52 RSGYIAEARDIFEKLEA--RNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVT- 104
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS---LDDARKIFDN 307
W ++ Y CG L++ARK+FD
Sbjct: 105 -----------------W-----------------NTMISGYVSCGGIRFLEEARKLFDE 130
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
+ RD +WN+MI GYA + EAL LF++M + + V++ A++T +G V
Sbjct: 131 MPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP----ERNAVSWSAMITGFCQNGEVDSA 186
Query: 368 WEIFNLM 374
+F M
Sbjct: 187 VVLFRKM 193
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 25/438 (5%)
Query: 190 AKHGRLREARLLFEGMEADSRDVVCWNVMIDEY---AQNGMPNECLLLFRKMLAEKVRPD 246
AK L + R L +EA+ ++MI+EY ++G + L + + D
Sbjct: 195 AKVSVLAKIRALVNNLEANYLKYYT-DIMIEEYDAFCKHGKVKKALYTIDILASMNYVVD 253
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
LL + CG+ L+ + +H + + +++ L++MY CG ++A +F+
Sbjct: 254 LSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFE 313
Query: 307 NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
+ ++++ W +I +A +G+ E+A+ +F G P F + ACG G V +
Sbjct: 314 KMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDE 373
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
G F M YG+ P IE + +V + G L+E + V M +P+ +W TL+
Sbjct: 374 GLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLS 433
Query: 427 RLHKNVSLGE---EIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVR--SLMKGSGV 481
R+H N+ LG+ E+ EF+ L + V A+ V SL K SG+
Sbjct: 434 RVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP---------VKASDVEKESLKKRSGI 484
Query: 482 EKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGE 541
+ V + + EF AGD P++ +++ +L + + GY +T + LHDI +
Sbjct: 485 -------LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQ 537
Query: 542 EQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRD 601
E KE L HSE++A A ++++ P ++KNLRVC+DCH+ +K+MS I GR++ITRD
Sbjct: 538 ESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRD 597
Query: 602 RNRFHHFENGSCSCGDYW 619
RFH +NG+C+C DYW
Sbjct: 598 IKRFHQMKNGACTCKDYW 615
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 230/456 (50%), Gaps = 14/456 (3%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
+ G + + L YS G + +F + P +V + + I + + S
Sbjct: 157 KSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPS 216
Query: 104 FYARMLA-QPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ M EPN TF + + C NLQ R +H V+K V T L+ Y
Sbjct: 217 VFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMY 276
Query: 159 ARGGDVFSAEKVFDEMSE-RSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCW 215
++ SA VF E+ + R+L+S ++++ +G+ A LFE ++++ D W
Sbjct: 277 SKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATW 336
Query: 216 NVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
N +I ++Q G E F +ML+ + P L ++LS+C + L++G+ IH +V
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIK 396
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI--VDRDVVAWNSMIMGYAIHGYSEEAL 333
++ V T+L+DMY KCG AR+IFD +D V WN MI GY HG E A+
Sbjct: 397 AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAI 456
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
+F+ + V+PS TF AVL+AC H G V KG +IF LM+ YG +P EH GCM++L
Sbjct: 457 EIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDL 516
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTY 453
LGR+GRL E +++ M SV +LL +CR H + LGEE A + + +
Sbjct: 517 LGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPF 575
Query: 454 VLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSI 489
V+LS+IYAA W +R ++ + K PG S+
Sbjct: 576 VILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 115 PNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
PN FTF +L C ++ R +H V+K + +T LV Y + V A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
DEM ER + SV A ++ ++G R+A +F D+R + +GM
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMF----GDAR-----------VSGSGM--- 130
Query: 231 CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVD 290
+ +T+ +VL CG + E G +H +EV VGT+LV
Sbjct: 131 ---------------NSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVS 172
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV-KPSDV 349
MY +CG A ++F+ + + VV +N+ I G +G +F+ M +P+DV
Sbjct: 173 MYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV 232
Query: 350 TFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
TFV +TAC + G ++ L MK + E + ++++ + + Y +
Sbjct: 233 TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT--ALIDMYSKCRCWKSAYIVFT 290
Query: 409 GMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL-ASSGTYVLLSNIYAASGNWV 467
+K + + W +++ ++ E+ E + S L S T+ L + ++ G +
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 468 GAAK 471
A K
Sbjct: 351 EAFK 354
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 213/436 (48%), Gaps = 41/436 (9%)
Query: 63 SYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFT 119
+YS G L + L+ ++ TSI+ ++ D A+ ++++ ++ +A
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 120 FSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
+LHGC ++ ++H + IK + + V GL+ Y++ DV + +F+++
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
E L+S WN +I Q+G + +F
Sbjct: 410 ETPLIS---------------------------------WNSVISGCVQSGRASTAFEVF 436
Query: 236 RKM-LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
+M L + PD IT+ ++L+ C QL L G+ +H Y + E V TAL+DMY K
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG+ A +F +I WNSMI GY++ G AL + EM G+KP ++TF+ V
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L+AC H G V +G F M +G+ P ++H+ MV LLGRA E L+ M P
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
DS +WG LL AC +H+ + +GE +A + + + G YVL+SN+YA W +VR+
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 475 LMKGSGVEKEPGCSII 490
+MK +G + G S I
Sbjct: 677 MMKDNGYDGYLGVSQI 692
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+R + T++L Y K G + A++LF+ E RD V WN +I Y++NG + LF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFD--EMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
ML + P TL+ +L CGQ G + GR +H ++ +V AL+ Y KC
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 296 GSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
L A +F + D+ V+WN+MI Y+ G EEA+ +F M V+ S VT + +L
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 356 TA 357
+A
Sbjct: 260 SA 261
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 10/221 (4%)
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
RD+ ++ ++ + + + +FR +L + P+ T+ L + + S +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQA--TTTSFNSFKLQ 68
Query: 270 HSYVGNH--KNGVE--VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAI 325
V H K+G++ V V T+L+++Y K G + A+ +FD + +RD V WN++I GY+
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKI 384
+GY +A +LF M G PS T V +L CG G VS+G + + K+G ++ ++
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 385 EHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWA 425
++ +++ + L L R MK D +V W T++ A
Sbjct: 189 KN--ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA 226
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 186/474 (39%), Gaps = 81/474 (17%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
+ GLD + L Y G + + LF+ P + +W ++I +S + A
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ ML Q P+A T ++L C + R++H K + V L+ Y+
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ ++ SAE +F EM ++S VS M+ Y++
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ---------------------------- 229
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+G+ E + +F+ M + V +T++ +LS A S +H V
Sbjct: 230 -----SGLQEEAITVFKNMFEKNVEISPVTIINLLS------AHVSHEPLHCLVVKCGMV 278
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
++ V T+LV Y +CG L A +++ + +V S++ YA G + A+ F +
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 340 CGMGVKPSDVTFVAVLTACGHS-----GLVSKGWEIFN------LMKNGY-GMEPKIEHF 387
+ +K V V +L C S G+ G+ I + L+ NG M K +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 388 GCMVNLLG------------------RAGRLEEGYDLVRGMKTD----PDSVLWGTLLWA 425
++ L ++GR +++ M PD++ +LL
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 426 CRLHKNVSLGEEIAEFILSHNLASSG-TYVLLSNIYAASGNWVGAAKVRSLMKG 478
C ++LG+E+ + L +N + L ++YA GN V A V +K
Sbjct: 459 CSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA 512
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 227/464 (48%), Gaps = 33/464 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH---SHSDQALS 103
+ G D L L Y G S + P +V WT +I +++AL
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
++ ML Q+ + I VAS + + +GA G
Sbjct: 333 VFSEML--------------------QSGSDLSSEAIASVVASCAQLGSFDLGASVHGY- 371
Query: 164 VFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
V D + SL+ T YAK G L ++ ++FE M + RD+V WN +I YA
Sbjct: 372 VLRHGYTLDTPALNSLI------TMYAKCGHLDKSLVIFERM--NERDLVSWNAIISGYA 423
Query: 224 QNGMPNECLLLFRKMLAEKVRP-DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
QN + LLLF +M + V+ D T++++L +C GAL G+ IH V
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
V TALVDMY KCG L+ A++ FD+I +DVV+W +I GY HG + AL ++ E
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
G++P+ V F+AVL++C H+G+V +G +IF+ M +G+EP EH C+V+LL RA R+E+
Sbjct: 544 GMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIED 603
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAA 462
+ + T P + G +L ACR + + + I E ++ +G YV L + +AA
Sbjct: 604 AFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAA 663
Query: 463 SGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRH 506
W ++ + M+ G++K PG S IE+N + F H
Sbjct: 664 MKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 50/342 (14%)
Query: 91 IIHAHSHSD--QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAV 144
I H SH D Q LS ++ MLA + P+ FTF S+L C L +IH V+
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 145 ASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEG 204
+S Y+S+ LV YA K G L AR +FE
Sbjct: 78 SSDFYISSSLVNLYA-------------------------------KFGLLAHARKVFEE 106
Query: 205 MEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALE 264
M RDVV W MI Y++ G+ E L +M + ++P +TLL +LS ++ L+
Sbjct: 107 MR--ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ 164
Query: 265 SGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYA 324
+H + + ++ V +++++YCKC + DA+ +FD + RD+V+WN+MI GYA
Sbjct: 165 C---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 325 IHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPK 383
G E L+L M G G++P TF A L+ G + G + ++K G+ ++
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH 281
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP--DSVLWGTLL 423
++ ++ + + G+ E Y R ++T P D V W ++
Sbjct: 282 LK--TALITMYLKCGKEEASY---RVLETIPNKDVVCWTVMI 318
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 158/365 (43%), Gaps = 41/365 (11%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y+ G L H+ +F +V WT++I +S + +A S M Q ++P T
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 121 SSVLHGC-NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
+L G + + +H + + V ++ Y + V A+ +FD+M +R +
Sbjct: 151 LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
VS M++ YA G + +E L L +M
Sbjct: 211 VSWNTMISGYASVGNM---------------------------------SEILKLLYRMR 237
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+ +RPD+ T A LS G + LE GR +H + V++ + TAL+ MY KCG +
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
+ ++ + I ++DVV W MI G G +E+AL +F EM G S +V+ +C
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 360 HSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVL 418
G G + ++++GY ++ ++ + + G L++ + M + D V
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPA--LNSLITMYAKCGHLDKSLVIFERM-NERDLVS 414
Query: 419 WGTLL 423
W ++
Sbjct: 415 WNAII 419
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N I+ + +G + L F MLA K+ PD T ++L +C L L G IH V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALR 334
+ + + ++LV++Y K G L ARK+F+ + +RDVV W +MI Y+ G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLL 394
L +EM G+KP VT + +L+ L + + YG + I M+NL
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGV----LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 395 GRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ + + DL M+ D V W T++
Sbjct: 190 CKCDHVGDAKDLFDQME-QRDMVSWNTMI 217
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 216/429 (50%), Gaps = 35/429 (8%)
Query: 76 LFNRTPTPNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC-NLQA 131
+F++ N WT++I A+ + + + + M + + PN T SVL C L
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK 191
++ + F+ + L A+ +T Y +
Sbjct: 267 GSSLVKEIHGFSFRHGCHADERLTAAF---------------------------MTMYCR 299
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLL 251
G + +R+LFE + RDVV W+ MI YA+ G +E + L +M E + + +TLL
Sbjct: 300 CGNVSLSRVLFE--TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLL 357
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
A++S+C L +HS + + +G AL+DMY KCGSL AR++F + ++
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF 371
D+V+W+SMI Y +HG+ EAL +F M G + D+ F+A+L+AC H+GLV + IF
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 372 NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKN 431
Y M +EH+ C +NLLGR G++++ +++ M P + +W +LL AC H
Sbjct: 478 T-QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Query: 432 VSL-GEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
+ + G+ IA ++ + YVLLS I+ SGN+ A +VR +M+ + K G S I
Sbjct: 537 LDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Query: 491 EVNNRIHEF 499
E +I ++
Sbjct: 597 EPELQIEDY 605
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 13/289 (4%)
Query: 155 VGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVC 214
+G+ ++ +F A + DE + S++ TA++ Y K A +F+ ME ++ V
Sbjct: 161 MGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV--KNEVS 218
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALES-GRWIHSYV 273
W MI N + LFR M E +RP+ +TLL+VL +C +L S + IH +
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFS 278
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
H + R+ A + MYC+CG++ +R +F+ RDVV W+SMI GYA G E +
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHF---GC 389
L ++M G++ + VT +A+++AC +S L+S + + ++K G+ + H
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF-----MSHILLGNA 393
Query: 390 MVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEI 438
++++ + G L ++ + T+ D V W +++ A LH + S EI
Sbjct: 394 LIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGHGSEALEI 441
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
R G L Y G++ S LF + +V +W+S+I ++ + + ++
Sbjct: 280 RHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+M + +E N+ T +++ C L A +H ++K S + L+ YA
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYA 399
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G + +A +VF E++E+ LVS ++M+ Y HG EA +F+GM +V
Sbjct: 400 KCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV------- 452
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
D++ LA+LS+C G +E + I + G +
Sbjct: 453 --------------------------DDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMP 486
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNI-VDRDVVAWNSMIMGYAIHG 327
V + +++ + G +DDA ++ N+ + W+S++ HG
Sbjct: 487 VTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 43/269 (15%)
Query: 99 DQALSFYARMLAQPVEPNAFT--FSSVLHGCNLQA-----ARAIHCHVIKFAVASAPYVS 151
D+AL Y ++ + N FT SV+ C Q +HC +K VS
Sbjct: 27 DEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 152 TGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRD 211
L+ YA+ ++ KVFD E RD
Sbjct: 86 NSLISMYAKFSRKYAVRKVFD---------------------------------EMLHRD 112
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALES-GRWIH 270
V + +I+ Q+G+ E + L ++M P + ++L+ C ++G+ R H
Sbjct: 113 TVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFH 172
Query: 271 SYV-GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS 329
+ V + + V + TALVDMY K A +FD + ++ V+W +MI G +
Sbjct: 173 ALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY 232
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
E + LF M ++P+ VT ++VL AC
Sbjct: 233 EMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 284 VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
V +L+ MY K RK+FD ++ RD V++ S+I G EA++L EM G
Sbjct: 84 VSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
P ++L C G SK +F+ L+ M+ + +V++ +
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 403 GYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNL 447
+ + M+ + V W ++ C ++N +G ++ + NL
Sbjct: 204 AFHVFDQMEV-KNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 7/384 (1%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ--ALSF 104
+ G + +L L Y+ G+L S F+ N+ W +++ +++ D LS
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSL 403
Query: 105 YARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
+ +ML P +TFS+ L C + + +H +++ YV + L+ +YA+ +
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 165 FSAEKVFDEMS-ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYA 223
A + D S S+V + + Y++ G+ E+ L +E D V WN+ I +
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP--DTVSWNIAIAACS 521
Query: 224 QNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK-NGVEV 282
++ E + LF+ ML +RPD+ T +++LS C +L L G IH + + +
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
V L+DMY KCGS+ K+F+ +++++ W ++I IHGY +EAL F E +
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
G KP V+F+++LTAC H G+V +G +F MK+ YG+EP+++H+ C V+LL R G L+E
Sbjct: 642 GFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKE 700
Query: 403 GYDLVRGMKTDPDSVLWGTLLWAC 426
L+R M D+ +W T L C
Sbjct: 701 AEHLIREMPFPADAPVWRTFLDGC 724
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 73/399 (18%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y + L + +F P ++ W ++ H + + F+ ++ +F
Sbjct: 159 YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF 218
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
VL G +L ++ +HC K + V L+ AY + G+ AE++F +
Sbjct: 219 LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD--- 275
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
A S D+V WN +I A++ P + L LF
Sbjct: 276 ------------------------------AGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE--VRVGTALVDMYCK 294
M P++ T ++VL + L GR IH + KNG E + +G AL+D Y K
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML--IKNGCETGIVLGNALIDFYAK 363
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
CG+L+D+R FD I D+++V WN+++ GYA + L LF +M MG +P++ TF
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 355 LTACG-------HSGLVSKGWE-----IFNLMKN--------------GYGMEP-KIEHF 387
L +C HS +V G+E + +LM++ + P +
Sbjct: 423 LKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 388 GCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
+ + R G+ E L+ ++ PD+V W + AC
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 157/370 (42%), Gaps = 49/370 (13%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y +G + + +F++ P N + +II +S D+A ++ M PN T
Sbjct: 59 YEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTV 118
Query: 121 SSVLHGCNL--QAARAIHCHVIKFAVASA-PYVSTGLVGAYARGGDVFSAEKVFDEMSER 177
S +L +L +A +H +K+ + A +V T L+ Y R + AE+VF++M
Sbjct: 119 SGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMP-- 176
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
F+ +E WN M+ G EC+ FR+
Sbjct: 177 ------------------------FKSLET-------WNHMMSLLGHRGFLKECMFFFRE 205
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
++ E + L VL + L+ + +H E+ V +L+ Y KCG+
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 298 LDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
A ++F + D+V+WN++I A +AL+LF M G P+ T+V+VL
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 358 CGHSGLVSKGWEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG---YDLVRGMKTD 413
L+S G +I L+KN G E I +++ + G LE+ +D +R D
Sbjct: 326 SSLVQLLSCGRQIHGMLIKN--GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR----D 379
Query: 414 PDSVLWGTLL 423
+ V W LL
Sbjct: 380 KNIVCWNALL 389
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 163/421 (38%), Gaps = 76/421 (18%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALS 103
++GLD + L +Y G+ H + +F + ++ W +II A + S+ +AL
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M PN T+ SVL +L R IH +IK + + L+ YA
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G++ + FD + +++ +VCWN ++
Sbjct: 363 KCGNLEDSRLCFDYIRDKN---------------------------------IVCWNALL 389
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSC--GQLGALES------------ 265
YA P CL LF +ML RP E T L SC +L L S
Sbjct: 390 SGYANKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDY 448
Query: 266 --GRWIHSYVGNH-----------KNGVEVRVGTALV-DMYCKCGSLDDARKIFDNIVDR 311
+ SY N +G V +V +Y + G ++ K+ +
Sbjct: 449 VLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF 371
D V+WN I + Y EE + LF M ++P TFV++L+ C ++ G I
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 372 NLM-KNGYGMEPKIEHFGC--MVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRL 428
L+ K + + F C ++++ G+ G + + + + + + W L+ +
Sbjct: 569 GLITKTDFSCA---DTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGI 624
Query: 429 H 429
H
Sbjct: 625 H 625
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 231/469 (49%), Gaps = 39/469 (8%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPV-EPNAFT 119
Y S G + + +F R PN+ W SII S + +QA+ Y R+L P+ +T
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Query: 120 FSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL 179
FS+ + + R +H ++ V Y ERS+
Sbjct: 405 FSAAISA-TAEPERFVHGKLLHGQVTKLGY--------------------------ERSV 437
Query: 180 VSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
T +L+ Y K+ A+ +F+ M+ RDVV W MI +++ G + F +M
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMK--ERDVVLWTEMIVGHSRLGNSELAVQFFIEMY 495
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
EK R D +L +V+ +C + L G H + V ALVDMY K G +
Sbjct: 496 REKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
A IF + D+ WNSM+ Y+ HG E+AL F+++ G P VT++++L AC
Sbjct: 556 TAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 360 HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV-RGMKTDPDSVL 418
H G +G ++N MK G++ +H+ CMVNL+ +AG ++E +L+ + + + L
Sbjct: 616 HRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 419 WGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKG 478
W TLL AC +N+ +G AE IL + + T++LLSN+YA +G W A++R ++G
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG 734
Query: 479 SGVEKEPGCSIIEV-NNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKAN 526
K+PG S IEV NN F +GD +P+ + +E+N RLK N
Sbjct: 735 LASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV--VSQAQDELN-RLKRN 780
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 178/390 (45%), Gaps = 49/390 (12%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTF 120
YSS G L + +F+ + W ++I +D+ L F+ ML V+P FT+
Sbjct: 244 YSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTY 303
Query: 121 SSVLHGCN----LQAARAIHCHVI-KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
S VL+GC+ + IH +I ++A P + L+ Y GD+ A VF
Sbjct: 304 SIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP-LDNALLDMYCSCGDMREAFYVF---- 358
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
GR+ L V WN +I ++NG + +L++
Sbjct: 359 -----------------GRIHNPNL------------VSWNSIISGCSENGFGEQAMLMY 389
Query: 236 RKMLAEKV-RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
R++L RPDE T A +S+ + G+ +H V V VGT L+ MY K
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
+ A+K+FD + +RDVV W MI+G++ G SE A++ F EM + + +V
Sbjct: 450 NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
+ AC ++ +G E+F+ + G + + G +V++ G+ G+ E + + + ++P
Sbjct: 510 IGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNP 567
Query: 415 DSVLWGTLLWACRLH----KNVSLGEEIAE 440
D W ++L A H K +S E+I E
Sbjct: 568 DLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 42/313 (13%)
Query: 54 PILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH----SDQALSFYARML 109
P N L Y G L + +F++ P NV + ++ A+S + A M
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 110 AQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
+ V+PN+ TF+S++ C ++ +++ +IK + V T ++G Y+ GD
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD-- 249
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
L AR +F+ + ++RD V WN MI +N
Sbjct: 250 -----------------------------LESARRIFDCV--NNRDAVAWNTMIVGSLKN 278
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
+ L+ FR ML V P + T VL+ C +LG+ G+ IH+ + + ++ +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV- 344
AL+DMYC CG + +A +F I + ++V+WNS+I G + +G+ E+A+ ++ + M
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 345 KPSDVTFVAVLTA 357
+P + TF A ++A
Sbjct: 399 RPDEYTFSAAISA 411
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 158/391 (40%), Gaps = 52/391 (13%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPN---------VFLWTSIIHAHSHSDQALS 103
+P N L Y L + +F++ P N VF + S+ + L
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASA---PYVSTGLVG 156
+ + P+ A + + C L+ AR IH V+ +A PY + L+
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
Y R C G L +AR +F+ M R+VV +N
Sbjct: 141 MYVR---------------------------C----GSLEQARKVFDKMP--HRNVVSYN 167
Query: 217 VMIDEYAQN-GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+ Y++N + L M E V+P+ T +++ C L + G ++S +
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRL 335
V V T+++ MY CG L+ AR+IFD + +RD VAWN+MI+G + E+ L
Sbjct: 228 LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMF 287
Query: 336 FDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLG 395
F M GV P+ T+ VL C G S G I + + + ++++
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYC 346
Query: 396 RAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
G + E + V G +P+ V W +++ C
Sbjct: 347 SCGDMREAF-YVFGRIHNPNLVSWNSIISGC 376
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 146/363 (40%), Gaps = 69/363 (19%)
Query: 143 AVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC--YAKHGRLREARL 200
A A PY + L+ Y R + A KVFD+M +R++V++ + Y G +++
Sbjct: 17 AAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQI 76
Query: 201 LFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQL 260
+ G MI N + + + L RK C +
Sbjct: 77 IKLGSFQ----------MIFFMPLNEIASSVVELTRK-------------------CVSI 107
Query: 261 GALESGRWIHSYVGNHKNGVEVRVGTA---LVDMYCKCGSLDDARKIFDNIVDRDVVAWN 317
L+ R IH+ V G A L+ MY +CGSL+ ARK+FD + R+VV++N
Sbjct: 108 TVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYN 167
Query: 318 SMIMGYAIH-GYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC------------------ 358
++ Y+ + ++ A L M VKP+ TF +++ C
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 359 -GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN---------LLG--RAGRLEEGYDL 406
G+S V + + + +E F C+ N ++G + ++E+G
Sbjct: 228 LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMF 287
Query: 407 VRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEI-AEFILSHNLASSGTYVLLSNIYAA 462
R M DP + +L C + SLG+ I A I+S +LA L ++Y +
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCS 347
Query: 463 SGN 465
G+
Sbjct: 348 CGD 350
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 220/454 (48%), Gaps = 44/454 (9%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP---TPNVFLWTSIIHA---HSHSDQ 100
+ GL+ P L YS+ G L ++ +F++ +V +W S++ + ++
Sbjct: 266 KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEA 325
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
AL ++ + +++T S L C NL+ +H V+ V + LV
Sbjct: 326 ALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVD 385
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
+A G++ A K+F + ++D++ ++
Sbjct: 386 LHANVGNIQDAHKLFHRLP---------------------------------NKDIIAFS 412
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
+I ++G + LFR+++ + D+ + +L C L +L G+ IH
Sbjct: 413 GLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK 472
Query: 277 KNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLF 336
E TALVDMY KCG +D+ +FD +++RDVV+W +I+G+ +G EEA R F
Sbjct: 473 GYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYF 532
Query: 337 DEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR 396
+M +G++P+ VTF+ +L+AC HSGL+ + MK+ YG+EP +EH+ C+V+LLG+
Sbjct: 533 HKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQ 592
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLL 456
AG +E +L+ M +PD +W +LL AC HKN L IAE +L Y L
Sbjct: 593 AGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSL 652
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSII 490
SN YA G W +KVR K G KE G S I
Sbjct: 653 SNAYATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 157/369 (42%), Gaps = 44/369 (11%)
Query: 60 LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAH--SHSDQALSFYARMLAQPVEPNA 117
L Y G + +VTLF+R P PNV W +I S +AL F RM + + +
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 118 FTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDE 173
F L C+ L + +HC V+K + S+P+ + L+ Y+ G + A VF +
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ 298
Query: 174 MSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLL 233
E + +S V WN M+ + N L
Sbjct: 299 -----------------------------EKLAVNS-SVAVWNSMLSGFLINEENEAALW 328
Query: 234 LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYC 293
L ++ + D TL L C L G +HS V ++ VG+ LVD++
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHA 388
Query: 294 KCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
G++ DA K+F + ++D++A++ +I G G++ A LF E+ +G+
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
Query: 354 VLTACGHSGLVSKGW--EIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM 410
+L C S L S GW +I L +K GY EP +V++ + G ++ G L GM
Sbjct: 449 ILKVC--SSLASLGWGKQIHGLCIKKGYESEPVTAT--ALVDMYVKCGEIDNGVVLFDGM 504
Query: 411 KTDPDSVLW 419
+ D V W
Sbjct: 505 -LERDVVSW 512
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 151/346 (43%), Gaps = 73/346 (21%)
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
+ +I HVIK ++ +++ ++ Y + A KVFDEMSER
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSER----------- 69
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML-AEKVRPDE 247
++V W M+ Y +G PN+ + L+R+ML +E+ +E
Sbjct: 70 ----------------------NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANE 107
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
AVL +CG +G ++ G ++ +G +V + ++VDMY K G L +A F
Sbjct: 108 FMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKE 167
Query: 308 IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
I+ +WN++I GY G +EA+ LF M +P+ V++ C SG V KG
Sbjct: 168 ILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM----PQPNVVSW-----NCLISGFVDKG 218
Query: 368 WEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACR 427
P+ F + + R G + +G+ L G+K AC
Sbjct: 219 -------------SPRALEF---LVRMQREGLVLDGFALPCGLK-------------ACS 249
Query: 428 LHKNVSLGEEIAEFILSHNLASSGTYV-LLSNIYAASGNWVGAAKV 472
+++G+++ ++ L SS + L ++Y+ G+ + AA V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR 311
A L CG++ A + G I ++V V + ++ MY L DA K+FD + +R
Sbjct: 10 AGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSER 69
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS-DVTFVAVLTACGHSGLVSKGWEI 370
++V W +M+ GY G +A+ L+ M + + + + AVL ACG G + G +
Sbjct: 70 NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 371 FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ + + + +V++ + GRL E + + P S W TL+
Sbjct: 130 YERIGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLI 180
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 220/448 (49%), Gaps = 40/448 (8%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
++GL+ + L Y G + + +F ++ LW +++ ++ + D+A
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 104 FYARMLAQP--VEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + + FTFSS+L C ++ + IH + K +
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQ---------------- 273
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
FD + TA+L YAK L +AR FE M R+VV WN MI
Sbjct: 274 ---------FD------IPVATALLNMYAKSNHLSDARECFESMVV--RNVVSWNAMIVG 316
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
+AQNG E + LF +ML E ++PDE+T +VLSSC + A+ + + + V +
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ V +L+ Y + G+L +A F +I + D+V+W S+I A HG++EE+L++F+ M
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML- 435
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
++P +TF+ VL+AC H GLV +G F M Y +E + EH+ C+++LLGRAG ++
Sbjct: 436 QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFID 495
Query: 402 EGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYA 461
E D++ M T+P + C +H+ + A+ +L Y +LSN Y
Sbjct: 496 EASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYV 555
Query: 462 ASGNWVGAAKVRSLMKGSGVE-KEPGCS 488
+ G+W AA +R + + K PGCS
Sbjct: 556 SEGHWNQAALLRKRERRNCYNPKTPGCS 583
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 248/473 (52%), Gaps = 27/473 (5%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y G + + LF+R + W +II+ ++ + +A RM VE + T+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 121 SSVLHGCNLQAAR---AIHCHV----IKFAVASAPYVSTGL-----VGAYARGGDVFSAE 168
+++ GC L+A A++C V + S ++ GL +GA + G VF
Sbjct: 289 NTIAGGC-LEAGNYIGALNCVVGMRNCNVRIGSVAMIN-GLKACSHIGAL-KWGKVFHCL 345
Query: 169 KVFDEMSERSLVSV-TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
+ + +V +++T Y++ LR A ++F+ +EA+S + WN +I +A N
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS--LSTWNSIISGFAYNER 403
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV-GT 286
E L ++ML P+ ITL ++L ++G L+ G+ H Y+ ++ + +
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
+LVDMY K G + A+++FD++ RD V + S+I GY G E AL F +M G+KP
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKP 523
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
VT VAVL+AC HS LV +G +F M++ +G+ ++EH+ CMV+L RAG L++ D+
Sbjct: 524 DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Query: 407 VRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAE-FILSHNLASSGTYVLLSNIYAASGN 465
+ +P S + TLL AC +H N ++GE A+ +L G Y+LL+++YA +G+
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGS 643
Query: 466 WVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEE 518
W V++L+ GV+K +++E ++ + G+ P + D + E+
Sbjct: 644 WSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVINQEQ 692
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 20/390 (5%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
GL+ +L KL YS+ L + T+ + + W +I ++ + +++S Y
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
RM+++ + + FT+ SV+ C + R +H + + YV L+ Y R
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREA-----RLLFEGMEADSRDVVCWN 216
G V A ++FD MSER VS A++ CY +L EA R+ G+EA +V WN
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA---SIVTWN 289
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV--- 273
+ + G L M VR + ++ L +C +GAL+ G+ H V
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+ + ++ V +L+ MY +C L A +F + + WNS+I G+A + SEE
Sbjct: 350 CSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
L EM G P+ +T ++L G + G E + + + + +V++
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
++G + + M+ D V + +L+
Sbjct: 469 YAKSGEIIAAKRVFDSMRKR-DKVTYTSLI 497
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 248/473 (52%), Gaps = 27/473 (5%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTF 120
Y G + + LF+R + W +II+ ++ + +A RM VE + T+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 121 SSVLHGCNLQAAR---AIHCHV----IKFAVASAPYVSTGL-----VGAYARGGDVFSAE 168
+++ GC L+A A++C V + S ++ GL +GA + G VF
Sbjct: 289 NTIAGGC-LEAGNYIGALNCVVGMRNCNVRIGSVAMIN-GLKACSHIGAL-KWGKVFHCL 345
Query: 169 KVFDEMSERSLVSV-TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
+ + +V +++T Y++ LR A ++F+ +EA+S + WN +I +A N
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS--LSTWNSIISGFAYNER 403
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV-GT 286
E L ++ML P+ ITL ++L ++G L+ G+ H Y+ ++ + +
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 287 ALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
+LVDMY K G + A+++FD++ RD V + S+I GY G E AL F +M G+KP
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKP 523
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
VT VAVL+AC HS LV +G +F M++ +G+ ++EH+ CMV+L RAG L++ D+
Sbjct: 524 DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Query: 407 VRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAE-FILSHNLASSGTYVLLSNIYAASGN 465
+ +P S + TLL AC +H N ++GE A+ +L G Y+LL+++YA +G+
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGS 643
Query: 466 WVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEE 518
W V++L+ GV+K +++E ++ + G+ P + D + E+
Sbjct: 644 WSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVINQEQ 692
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 20/390 (5%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFY 105
GL+ +L KL YS+ L + T+ + + W +I ++ + +++S Y
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 106 ARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
RM+++ + + FT+ SV+ C + R +H + + YV L+ Y R
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREA-----RLLFEGMEADSRDVVCWN 216
G V A ++FD MSER VS A++ CY +L EA R+ G+EA +V WN
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA---SIVTWN 289
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV--- 273
+ + G L M VR + ++ L +C +GAL+ G+ H V
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
+ + ++ V +L+ MY +C L A +F + + WNS+I G+A + SEE
Sbjct: 350 CSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
L EM G P+ +T ++L G + G E + + + + +V++
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 394 LGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
++G + + M+ D V + +L+
Sbjct: 469 YAKSGEIIAAKRVFDSMRKR-DKVTYTSLI 497
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 205/401 (51%), Gaps = 16/401 (3%)
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
+D + G + + + + E D L + CG AL+ + +H ++ +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
++ ++++MY CGS++DA +F+++ +R++ W +I +A +G E+A+ F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAG 398
G KP F + ACG G +++G F M YG+ P +EH+ +V +L G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 399 RLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSN 458
L+E V M +P+ LW TL+ R+H ++ LG+ + + + +
Sbjct: 333 YLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGL 390
Query: 459 IYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEE 518
+ S + V K++ + KG N I AGD+ P+++++Y+ L+
Sbjct: 391 VPVKSSDLV-KEKLQRMAKGP-------------NYGIRYMAAGDISRPENRELYMALKS 436
Query: 519 MNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRV 578
+ + GY P + L LHD+ +E K+ +L H+E+ A + T + I+++KNLRV
Sbjct: 437 LKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRV 496
Query: 579 CLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
C DCH+ +K+MSKI GR++I+RD RFHH ++G CSC +YW
Sbjct: 497 CADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 225/470 (47%), Gaps = 51/470 (10%)
Query: 47 RRGLDPHPILNFK-LQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQAL 102
RRG D + L YS + + +F+ T N+ W SI+ H+ D+AL
Sbjct: 254 RRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEAL 313
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAY 158
+ M+ + VE + T S+L C ++IH +I+ S + L+ AY
Sbjct: 314 EMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAY 373
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
V A V D M+ +DVV + M
Sbjct: 374 TSCSLVDDAGTVLDSMT---------------------------------YKDVVSCSTM 400
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I A G +E + +F M + P+ IT++++L++C L + +W H
Sbjct: 401 ISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSL 457
Query: 279 GV-EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
+ ++ VGT++VD Y KCG+++ AR+ FD I ++++++W +I YAI+G ++AL LFD
Sbjct: 458 AINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 517
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
EM G P+ VT++A L+AC H GLV KG IF M +P ++H+ C+V++L RA
Sbjct: 518 EMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRA 576
Query: 398 GRLEEGYDLVRGMKTD--PDSVLWGTLLWAC--RLHKNVSLGEEIAEFILSHNLASSGTY 453
G ++ +L++ + D + WG +L C R K + E +AE + L SSG Y
Sbjct: 577 GEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSG-Y 635
Query: 454 VLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGD 503
+L S+ +AA +W A +R L+K V G S++ N F+AGD
Sbjct: 636 LLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 71/406 (17%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTF 120
Y G L + F+ + + W I+ + ++ L +++++ EPN T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 121 SSVLHGCN--LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
V+H C IH +VI+ V ++ YA D SA K+FDEMSER
Sbjct: 131 VLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYA-DSDSLSARKLFDEMSER- 188
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
DV+ W+V+I Y Q+ P L LF++M
Sbjct: 189 --------------------------------DVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Query: 239 LAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSY-VGNHKNGVEVRVGTALVDMYCKCG 296
+ E K PD +T+ +VL +C + ++ GR +H + + + +V V +L+DMY K
Sbjct: 217 VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF 276
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
+D A ++FD R++V+WNS++ G+ + +EAL +F M V+ +VT V++L
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 357 ACG-----------HSGLVSKGWE----IFNLMKNGYGMEPKIEHFG------------- 388
C H ++ +G+E + + + Y ++ G
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 389 --CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNV 432
M++ L AGR +E + M+ P+++ +LL AC + ++
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADL 442
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 31/201 (15%)
Query: 285 GTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
G ++ D Y KCG L + FD + RD V+WN ++ G +G+ EE L F ++ G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 345 KPSDVTFVAVLTAC-----------------GHSGLVSKGWEIFNLMKNGYGM------- 380
+P+ T V V+ AC G G+ S I + + +
Sbjct: 124 EPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFD 183
Query: 381 ---EPKIEHFGCMVNLLGRAGRLEEGYDLVRGM----KTDPDSVLWGTLLWACRLHKNVS 433
E + + ++ ++ G L + M KT+PD V ++L AC + +++
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 434 LGEEIAEFILSHNLASSGTYV 454
+G + F + + +V
Sbjct: 244 VGRSVHGFSIRRGFDLADVFV 264
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 222/458 (48%), Gaps = 54/458 (11%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALS 103
++G + I L YS GHL SV +F ++ W +++ + +AL
Sbjct: 112 KQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALG 171
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+A M + VE + FT SSV+ C LQ + +H V+
Sbjct: 172 VFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV------------------- 212
Query: 160 RGGDVFSAEKVFDEMSERSLVSV-TAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
++ R LV + TAM++ Y+ G + EA ++ + + D V N +
Sbjct: 213 --------------VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHT-DEVMLNSL 257
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
I +N E LL + RP+ L + L+ C L G+ IH +
Sbjct: 258 ISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF 312
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
+ ++ L+DMY KCG + AR IF I + VV+W SMI YA++G +AL +F E
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Query: 339 MC--GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGR 396
MC G GV P+ VTF+ V++AC H+GLV +G E F +MK Y + P EH+ C +++L +
Sbjct: 373 MCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSK 432
Query: 397 AGRLEEGYDLV-RGMKTDPDSV---LWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
AG EE + LV R M+ D S+ +W +L AC L+ +++ GE +A ++ + +
Sbjct: 433 AGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENAS 492
Query: 453 -YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSI 489
YVL+SN YAA G W ++R +K G+ K G S+
Sbjct: 493 IYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 19/304 (6%)
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
F + ++ S +L C A LF+ E RD+ N + + ++G PN+
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFD--ELPQRDLSSLNSQLSSHLRSGNPND 67
Query: 231 CLLLFRKMLAEKVRPD--EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
L LF ++ + PD T VL +C L E+GR +H+ + TAL
Sbjct: 68 TLALFLQI--HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTAL 125
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+DMY K G L D+ ++F+++ ++D+V+WN+++ G+ +G +EAL +F M V+ S+
Sbjct: 126 IDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
T +V+ C ++ +G ++ + + G + + M++ G + E +
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL---VVLGTAMISFYSSVGLINEAMKVY 242
Query: 408 RGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGN-- 465
+ D V+ +L+ C ++N E L + VL S++ S N
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYK------EAFLLMSRQRPNVRVLSSSLAGCSDNSD 296
Query: 466 -WVG 468
W+G
Sbjct: 297 LWIG 300
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 15/400 (3%)
Query: 103 SFYARMLAQPVEPNAFTFSSVLHGC-----NLQAARAIHCHVIKFAVASAPYVSTGLVGA 157
S + R+ + +++SV+ GC +L++ RA + + G + A
Sbjct: 531 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 158 YARGGDVFSAEKVFDEMSERSLVSVTAML--TCYAKHGRLR--EARLLFEGMEADSRDVV 213
G V + F ++ +SL + L T +GR + E+ + G+ +D ++
Sbjct: 591 SGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP-NLC 648
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
WN +I +QN E LFR + K+ P+EIT + +LS+ QLG+ G H ++
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHL 705
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEAL 333
V ALVDMY CG L+ K+F N + AWNS+I + HG E+A+
Sbjct: 706 IRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAM 765
Query: 334 RLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVN 392
LF E+ ++P+ +F+++L+AC HSG + +G + M+ +G++P EH +V+
Sbjct: 766 ELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVD 825
Query: 393 LLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGT 452
+LGRAG+L E Y+ + G+ + +WG LL AC H + LG+E+AE + ++
Sbjct: 826 MLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASY 885
Query: 453 YVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEV 492
Y+ L+N Y G W A ++R +++ + ++K PG S+I+V
Sbjct: 886 YISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 44/377 (11%)
Query: 59 KLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQPVEPNAF 118
KL Y G L S LF+ +V +W S+I A + + + ++ + + N F
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186
Query: 119 -------TFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVF 171
S++ + +HC I+ TGLVG
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIE----------TGLVG--------------- 221
Query: 172 DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNEC 231
+ SL + A++ YAK L A +F ME RD+V WN ++ + NG P +
Sbjct: 222 ----DSSLCN--ALMNLYAKGENLSSAECVFTHME--HRDIVSWNTIMTKCLANGHPRKS 273
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV--GNHKNGVEVRVGTALV 289
L F+ M D +T V+S+C + L G +H V + V VG +++
Sbjct: 274 LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSII 333
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSD 348
MY KCG + A +F+ +V RDV++ N+++ G+A +G EEA + ++M + ++P
Sbjct: 334 SMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDI 393
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
T V++ + CG +G + +E ++++ G+ G L +L+
Sbjct: 394 ATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLF 452
Query: 409 GMKTDPDSVLWGTLLWA 425
T D V W +++ A
Sbjct: 453 KTTTHRDLVSWNSMISA 469
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 149/312 (47%), Gaps = 34/312 (10%)
Query: 157 AYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
+++R G V EM R+L + +++ Y K G +A LLF+ RD+V WN
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK--TTTHRDLVSWN 464
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEK--VRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
MI ++QNG ++ LF+++++E + T+LA+L+SC +L G+ +H ++
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ 524
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD-RDVVAWNSMIMGYAIHGYSEEAL 333
K G L A + + + RD+ +WNS+I G A G+ E+L
Sbjct: 525 -------------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 334 RLFDEMCGMG-VKPSDVTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMV 391
R F M G ++ +T + ++A G+ GLV +G L +K+ ++ ++++ ++
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN--TLI 623
Query: 392 NLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG 451
+ GR +E V G+ +DP+ W ++ A +K G E+ F L NL
Sbjct: 624 TMYGRCKDIESAVK-VFGLISDPNLCSWNCVISALSQNK---AGREV--FQLFRNLKLEP 677
Query: 452 TYVLLSNIYAAS 463
+ + +AS
Sbjct: 678 NEITFVGLLSAS 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 59/330 (17%)
Query: 56 LNFKLQRS----YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSDQALSFYARMLAQ 111
L+ +LQ + Y + +V +F PN+ W +I A S + +
Sbjct: 614 LDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 673
Query: 112 PVEPNAFTFSSVLHGCNLQAARAI----HCHVIKFAVASAPYVSTGLVGAYARGGDVFSA 167
+EPN TF +L + + HCH+I+ + P+VS LV Y+ G + +
Sbjct: 674 KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG 733
Query: 168 EKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGM 227
KVF S+ + ++++ + HG +A LF+ + ++S
Sbjct: 734 MKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNS------------------ 775
Query: 228 PNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
++ P++ + +++LS+C G ++ G SY + V+ T
Sbjct: 776 --------------EMEPNKSSFISLLSACSHSGFIDEGL---SYYKQMEEKFGVKPVTE 818
Query: 288 ----LVDMYCKCGSLDDARKIFDNIVD-RDVVAWNSMIMGYAIHG---YSEEALRLFDEM 339
+VDM + G L +A + I + + W +++ HG +E + EM
Sbjct: 819 HRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEM 878
Query: 340 CGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
+P + ++ L A + GL GWE
Sbjct: 879 -----EPDNASYYISL-ANTYVGL--GGWE 900
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 221/466 (47%), Gaps = 80/466 (17%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
++GL + L YS G L + LF +V W+++I ++ + D+A+S
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCNLQAA----RAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M+ ++PNA T +SVL GC AA ++IHC+ IK + S +T ++ YA
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYA 447
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGME-----ADSRDVV- 213
+ G A K F+ + + V+ A+ Y + G +A +++ M+ DSR +V
Sbjct: 448 KCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 214 ----CWNVMIDEYA----------QNGMPNEC-------------------LLLFRKMLA 240
C +YA ++G +EC ++LF K
Sbjct: 508 MLQTC--AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGF 565
Query: 241 EK--------------------------------VRPDEITLLAVLSSCGQLGALESGRW 268
EK +P+ +T + ++ + +L AL G
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGY 328
+HS + + VG +LVDMY KCG ++ + K F I ++ +V+WN+M+ YA HG
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
+ A+ LF M +KP V+F++VL+AC H+GLV +G IF M + +E ++EH+
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSL 434
CMV+LLG+AG E +++R M+ +WG LL + R+H N+ L
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWL 791
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 162 GDVFSAEKVFDEMSERSLVS----VTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNV 217
GD+ + D ++ L+ T++++ Y+K G L A LF +E RDVV W+
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE--DRDVVSWSA 371
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
MI Y Q G +E + LFR M+ ++P+ +TL +VL C + A G+ IH Y
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
E+ TA++ MY KCG A K F+ + +D VA+N++ GY G + +A ++
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGR 396
M GV P T V +L C ++G ++ ++K+G+ E + H ++N+ +
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTK 549
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEF 441
L L + +V W ++ LH E +A F
Sbjct: 550 CDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE--EAVATF 592
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 167/383 (43%), Gaps = 49/383 (12%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHSD---QALSFY 105
GL PH +L +YS S +F+ P V LW S+I ++ + +AL F+
Sbjct: 32 GLKPHN----QLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFF 87
Query: 106 ARMLAQP-VEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
M + ++P+ ++F+ L C + + IH + + + S Y+ T LV Y +
Sbjct: 88 GYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK 147
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMID 220
D+ SA +VFD+M + +V+ M++ A++G A LLF M + D+
Sbjct: 148 ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI-------- 199
Query: 221 EYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV 280
D ++L ++ + +L + R +H V K G
Sbjct: 200 -------------------------DHVSLYNLIPAVSKLEKSDVCRCLHGLV--IKKGF 232
Query: 281 EVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ L+DMYC C L A +F+ + +D +W +M+ YA +G+ EE L LFD M
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
V+ + V + L A + G + KG I + G+ + ++++ + G L
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ-QGLIGDVSVATSLMSMYSKCGEL 351
Query: 401 EEGYDLVRGMKTDPDSVLWGTLL 423
E L ++ D D V W ++
Sbjct: 352 EIAEQLFINIE-DRDVVSWSAMI 373
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 152/359 (42%), Gaps = 43/359 (11%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFY 105
GL+ + L Y L + +F++ +V W +++ + S AL +
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 106 ARMLAQPVEPNAFTFSSVLHGCNL----QAARAIHCHVIKFAVASAPYVSTGLVGAYARG 161
M + V+ + + +++ + R +H VIK A S+GL+ Y
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNC 247
Query: 162 GDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDE 221
D+++AE VF+E+ + D W M+
Sbjct: 248 ADLYAAESVFEEVWRK---------------------------------DESSWGTMMAA 274
Query: 222 YAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVE 281
YA NG E L LF M VR +++ + L + +G L G IH Y +
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
V V T+L+ MY KCG L+ A ++F NI DRDVV+W++MI Y G +EA+ LF +M
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRL 400
+ +KP+ VT +VL C G I +E ++E ++++ + GR
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRF 452
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 188/336 (55%), Gaps = 16/336 (4%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTF 120
++ V L ++ F+R P +V W +++ ++ ++ AL + ML V PN T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 121 SSVLHGCNLQAARAIHCHVIKFA----VASAPYVSTGLVGAYARGGDVFSAEKVFDEM-S 175
V+ C+ +A ++ ++K V +V T L+ +A+ D+ SA ++F+E+ +
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 176 ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
+R+LV+ AM++ Y + G + AR LF+ M R+VV WN +I YA NG + F
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMP--KRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 236 RKMLAE-KVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
M+ +PDE+T+++VLS+CG + LE G I Y+ ++ + +L+ MY +
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYAR 445
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
G+L +A+++FD + +RDVV++N++ +A +G E L L +M G++P VT+ +V
Sbjct: 446 GGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
LTAC +GL+ +G IF ++N P +H+ CM
Sbjct: 506 LTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 183/422 (43%), Gaps = 72/422 (17%)
Query: 71 HHSVTLFNRTPTPNVFLWTSIIHAHSHSDQA---LSFYARMLAQPVEPNAFTFSSVLHGC 127
+++ +F+ PNVF+ S+ S D A L Y + + P+AF+F V+
Sbjct: 57 YYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 128 NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER---------- 177
+ V K PYV ++ Y + V SA KVFD++S+R
Sbjct: 117 G-RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 178 ---------------------SLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWN 216
+VS T M+T +AK L AR F+ M S VV WN
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS--VVSWN 233
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNH 276
M+ YAQNG + L LF ML VRP+E T + V+S+C R + +
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK 293
Query: 277 KNGVEVRVGTALVDMYCKC--------------------------------GSLDDARKI 304
+ + V TAL+DM+ KC G + AR++
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 305 FDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG-VKPSDVTFVAVLTACGHSGL 363
FD + R+VV+WNS+I GYA +G + A+ F++M G KP +VT ++VL+ACGH
Sbjct: 354 FDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMAD 413
Query: 364 VSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ G I + ++ ++ + ++ + R G L E + MK + D V + TL
Sbjct: 414 LELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLF 471
Query: 424 WA 425
A
Sbjct: 472 TA 473
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 19/276 (6%)
Query: 170 VFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPN 229
VF+ + +S + + C RL+F+ + + VV N M +++ M N
Sbjct: 31 VFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVV--NSMFKYFSKMDMAN 88
Query: 230 ECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALV 289
+ L L+ + + PD + V+ S G+ G L + +G K+ V ++
Sbjct: 89 DVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA--LVEKLGFFKDPY---VRNVIM 143
Query: 290 DMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDV 349
DMY K S++ ARK+FD I R WN MI GY G EEA +LFD M V V
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV----V 199
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
++ ++T + + F+ M E + + M++ + G E+ L
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMP-----EKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 410 M---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFI 442
M P+ W ++ AC + SL + + I
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 182/370 (49%), Gaps = 15/370 (4%)
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
LL + CG++ ALE R +H + ++ R +++MY C S DDA +F+ +
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
R+ W +MI A +G E A+ +F G KP F AV AC G +++G
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 370 IFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWACRLH 429
F M YGM +E + ++ +L G L+E D V M +P +W TL+ C +
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 430 KNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSI 489
+ LG+ AE I + AS + + + AA + K++ L + +P
Sbjct: 291 GYLELGDRFAELIKKLD-ASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDP---- 345
Query: 490 IEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLE 549
R+HEF AGD H + + + ++ G+ P T + + EE+KE L
Sbjct: 346 ---KKRMHEFRAGDTSHLGTVSAF---RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLL 399
Query: 550 VHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFE 609
S KLA A +I++ + +++N+R C+D H+ KM+S ITGR +I RD+ ++H ++
Sbjct: 400 FRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYK 459
Query: 610 NGSCSCGDYW 619
NG CSC DYW
Sbjct: 460 NGVCSCKDYW 469
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 185/379 (48%), Gaps = 26/379 (6%)
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIF 305
D I LL + CG+ ALE+ R +H + + +V A+++MY C S+DDA K+F
Sbjct: 118 DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVF 177
Query: 306 DNIVDRDVVAWNS-----MIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGH 360
+ + + WNS M+ + +GY EEA+ LF G KP+ F V + C
Sbjct: 178 EEMPE-----WNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTL 232
Query: 361 SGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWG 420
+G V +G F M YG+ P +EH+ + +L +G L+E + V M +P +W
Sbjct: 233 TGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWE 292
Query: 421 TLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
TL+ R+H +V LG+ AE L+ + A + V +A + +
Sbjct: 293 TLMNLSRVHGDVELGDRCAE--------------LVEKLDATRLDKVSSAGLVATKASDF 338
Query: 481 VEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLHDIG 540
V+KEP S F D HP+ IY L + +LK GY P T I
Sbjct: 339 VKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIM 396
Query: 541 EEQKELSLEVHSEKLALAFGLISTRPGTTIKIVKNLRVCLDCHSVMKMMSKITGRKIITR 600
+ + + + E++A+ L+ ++P + I ++ N+R+ DCH +MK+MS ITGR +I R
Sbjct: 397 AMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKR 456
Query: 601 DRNRFHHFENGSCSCGDYW 619
D +H F+NG C C + W
Sbjct: 457 DAKIYHLFKNGVCRCNNLW 475
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 41/440 (9%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTF 120
YS+ G L S+ FN P +V W SI+ + +L +++M P+ F
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPF 318
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S L+ C ++Q+ + IHC+V+K G DV
Sbjct: 319 MSFLNFCSRNSDIQSGKQIHCYVLKM------------------GFDV------------ 348
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
SL +A++ Y K + + LL++ + ++ C N ++ G+ + + +F
Sbjct: 349 SSLHVQSALIDMYGKCNGIENSALLYQSLPC--LNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 237 KMLAEKVRPDEITLLAVLS--SCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
M+ E DE+TL VL S +L S +H +V V +L+D Y K
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 295 CGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
G + +RK+FD + ++ S+I GYA +G + +++ EM M + P +VT ++V
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSV 526
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP 414
L+ C HSGLV +G IF+ +++ YG+ P + + CMV+LLGRAG +E+ L+ + D
Sbjct: 527 LSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDA 586
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
D V W +LL +CR+H+N ++G AE +++ + Y+ +S Y G++ + ++R
Sbjct: 587 DCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Query: 475 LMKGSGVEKEPGCSIIEVNN 494
+ + +E G S + V N
Sbjct: 647 IAASRELMREIGYSSVVVKN 666
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVEPNAFTFSSVL 124
G+L + F+ +V + +I +S S +A+ YA M++ + +A TF SVL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 125 HGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV 180
C+ + +HC VI +V + LVG YA V A K+FDEM +R+L
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLA 179
Query: 181 SVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLA 240
+L C+ + G E++ LFE ++ +M
Sbjct: 180 VCNLLLRCFCQTG---ESKRLFE------------------------------VYLRMEL 206
Query: 241 EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK-NGVEVRVGTALVDMYCKCGSLD 299
E V + +T ++ C + G+ +HS V N + V LVD Y CG L
Sbjct: 207 EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLS 266
Query: 300 DARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACG 359
+ + F+ + ++DV++WNS++ A +G ++L LF +M G +PS F++ L C
Sbjct: 267 GSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Query: 360 HSGLVSKGWEI 370
+ + G +I
Sbjct: 327 RNSDIQSGKQI 337
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 191 KHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
K G L A F+ M RDVV +N++I ++ G + L+ +M++ +R T
Sbjct: 58 KSGNLLSAHEAFDEMSV--RDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTF 115
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+VLS C G +H V + G + V +ALV +Y +D A K+FD ++D
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 311 RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
R++ N ++ + G S+ ++ M GV + +T+ ++ C H LV +G ++
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 371 FNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDP--DSVLWGTLLWAC 426
+L +K+G+ + I +V+ G L +R P D + W +++ C
Sbjct: 236 HSLVVKSGWNI-SNIFVANVLVDYYSACGDLSGS---MRSFNAVPEKDVISWNSIVSVC 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+D K G+L A + FD + RDVV +N +I G + +G S A+ L+ EM G++ S
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 349 VTFVAVLTACGHSGLVSKGWEI 370
TF +VL+ C +G ++
Sbjct: 113 STFPSVLSVCSDELFCREGIQV 134
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 233/500 (46%), Gaps = 53/500 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
+ G + L+ L R Y + L + +F+ P P+V W S++ + S + +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC---NLQAARA-IHCHVIKFAVASAPYV-STGLVGAY 158
+ + V PN F+F++ L C +L A IH ++K + V L+ Y
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 159 ARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVM 218
+ G + A VF M E+ VS A++ +++G+L F M + D V +N +
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP--NPDTVTYNEL 260
Query: 219 IDEYAQNG-----------MPN--------------------ECLLLFRKMLAEKVRPDE 247
ID + ++G MPN E F KM + VR DE
Sbjct: 261 IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE 320
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV--GTALVDMYCKCGSLDDARKIF 305
+L VL++ L + G IH+ HK G++ RV +AL+DMY KCG L A +F
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACA--HKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 306 DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG-MGVKPSDVTFVAVLTACGHSGL- 363
+ ++++ WN MI GYA +G S EA++LF+++ +KP TF+ +L C H +
Sbjct: 379 WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVP 438
Query: 364 --VSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGT 421
V G+ F +M N Y ++P +EH ++ +G+ G + + +++ D V W
Sbjct: 439 MEVMLGY--FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSGT--YVLLSNIYAASGNWVGAAKVRSLMKGS 479
LL AC K++ + +A ++ A Y+++SN+YA W ++R +M+ S
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556
Query: 480 GVEKEPGCSIIEVNNRIHEF 499
GV KE G S I+ + +
Sbjct: 557 GVLKEVGSSWIDSRTKCSSY 576
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 26/251 (10%)
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+++ + +PD L+ +L G G + R +H YV H R+ +L+ Y
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
SL+DA K+FD + D DV++WNS++ GY G +E + LF E+ V P++ +F A L
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 357 ACG-----------HSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYD 405
AC HS LV G E N++ C++++ G+ G +++
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVG-----------NCLIDMYGKCGFMDDAVL 213
Query: 406 LVRGMKTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGN 465
+ + M+ + D+V W ++ +C + + LG F + TY L + + SG+
Sbjct: 214 VFQHME-EKDTVSWNAIVASCSRNGKLELG---LWFFHQMPNPDTVTYNELIDAFVKSGD 269
Query: 466 WVGAAKVRSLM 476
+ A +V S M
Sbjct: 270 FNNAFQVLSDM 280
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 133 RAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKH 192
R +H +V K S +S L+ Y + A KVFDEM + ++S ++++ Y +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 193 GRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLA 252
GR +E +C LF ++ V P+E + A
Sbjct: 135 GRFQEG--------------IC-------------------LFLELHRSDVFPNEFSFTA 161
Query: 253 VLSSCGQLGALESGRWIHSYVGNHKNGVE---VRVGTALVDMYCKCGSLDDARKIFDNIV 309
L++C +L G IHS + K G+E V VG L+DMY KCG +DDA +F ++
Sbjct: 162 ALAACARLHLSPLGACIHSKLV--KLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 310 DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWE 369
++D V+WN+++ + +G E L F +M P VT+ ++ A SG + ++
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQ 275
Query: 370 IFNLMKN 376
+ + M N
Sbjct: 276 VLSDMPN 282
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 218/462 (47%), Gaps = 42/462 (9%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
Y +G +++++F +V W +I + S S + AL + M ++P+ +T
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 121 SSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
S V+ C+ L + IK S V +GA G D+FS
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIV----LGA---GIDMFS---------- 281
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
K RL ++ LF +E D V N MI Y+ + + L LF
Sbjct: 282 --------------KCNRLDDSVKLFRELE--KWDSVLCNSMIGSYSWHCCGEDALRLFI 325
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
+ + VRPD+ T +VLSS + L+ G +HS V ++ V T+L++MY K G
Sbjct: 326 LAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTG 384
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC-GMGVKPSDVTFVAVL 355
S+D A +F +D++ WN++IMG A + + E+L +F+++ +KP VT + +L
Sbjct: 385 SVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPD 415
AC ++G V++G +IF+ M+ +G+ P EH+ C++ LL R G + E D+ + +P
Sbjct: 445 VACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Query: 416 SVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSL 475
S +W +L A + L E +A+ +L SS Y++L IY + W + K+R
Sbjct: 505 SHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYA 564
Query: 476 MKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLE 517
M ++ G S I + + + F A L+ D +L+
Sbjct: 565 MNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCALLD 606
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 20/323 (6%)
Query: 115 PNAFTFSSVLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
P++ FS +++ L A+ +H +++ Y + Y + G V +A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 171 FDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNE 230
FD++ +++ ++ L K+G L A LF+ E RDVV WN MI G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFD--EMPERDVVSWNTMISGLVSCGFHEY 119
Query: 231 CLLLFRKMLAEKVRPDEIT--LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
+ +F M ++RP E T +LA L +C + G G I S V + + V ++
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN----LVVWNSV 175
Query: 289 VDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
+DMY + G D A +F + DRDVV+WN +I+ + G E AL F M M ++P +
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
T V++ C +SKG + L +K G+ + G +++ + RL++ L
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV--LGAGIDMFSKCNRLDDSVKLF 293
Query: 408 RGMKTDPDSVLWGTLL----WAC 426
R ++ DSVL +++ W C
Sbjct: 294 RELEK-WDSVLCNSMIGSYSWHC 315
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 171/384 (44%), Gaps = 53/384 (13%)
Query: 68 GHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTFSSVL 124
G+L++++ LF+ P +V W ++I + + + + M + P FTFS +
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL- 142
Query: 125 HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTA 184
A + C R G+ + +S +LV +
Sbjct: 143 -------ASLVTC---------------------VRHGEQIHGNAICSGVSRYNLVVWNS 174
Query: 185 MLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
++ Y + G A +F ME RDVV WN +I + +G L F M +++
Sbjct: 175 VMDMYRRLGVFDYALSVFLTME--DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDA 301
PDE T+ V+S C L L G+ + +G N + + G +DM+ KC LDD+
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG---IDMFSKCNRLDDS 289
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHS 361
K+F + D V NSMI Y+ H E+ALRLF V+P TF +VL++ ++
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NA 348
Query: 362 GLVSKGWEIFNL-MKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM--KTD-PDSV 417
++ G ++ +L +K G+ ++ + ++ + + G + DL G+ KTD D +
Sbjct: 349 VMLDHGADVHSLVIKLGFDLDTAVA--TSLMEMYFKTGSV----DLAMGVFAKTDGKDLI 402
Query: 418 LWGTLLWACRLHKNVSLGEEIAEF 441
W T++ L +N E +A F
Sbjct: 403 FWNTVIMG--LARNSRAVESLAIF 424
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 179/360 (49%), Gaps = 15/360 (4%)
Query: 76 LFNRTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHGCN---- 128
+F+ P+ W I+ + +D+A+ + +ML V P T SSV+ C+
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTC 188
L+ + IH +K +V + VST + Y + + SA +VFD+ + L S T+ ++
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 189 YAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
YA G REAR LF+ M R++V WN M+ Y +E L M E D +
Sbjct: 339 YAMSGLTREARELFDLMP--ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
TL+ +L+ C + ++ G+ H ++ H V V AL+DMY KCG+L A F +
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 309 VD-RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
+ RD V+WN+++ G A G SE+AL F+ M + KPS T +L C + ++ G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 368 WEIFN-LMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
I L+++GY ++ I G MV++ + + ++ + T D +LW +++ C
Sbjct: 516 KAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGC 572
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 180/388 (46%), Gaps = 40/388 (10%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSII--HAHSHS-DQALSFYARMLAQPVEPNAFTF 120
Y+ G + LF+ P N+ W +++ + H+H D+AL F M + + T
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+L+ C ++Q + H + Y G D
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFI------------------YRHGYDT------------ 428
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
+++ A+L Y K G L+ A + F M ++ RD V WN ++ A+ G + L F
Sbjct: 429 -NVIVANALLDMYGKCGTLQSANIWFRQM-SELRDEVSWNALLTGVARVGRSEQALSFFE 486
Query: 237 KMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCG 296
M E +P + TL +L+ C + AL G+ IH ++ ++V + A+VDMY KC
Sbjct: 487 GMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCR 545
Query: 297 SLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLT 356
D A ++F RD++ WNS+I G +G S+E LF + GVKP VTF+ +L
Sbjct: 546 CFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQ 605
Query: 357 ACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDS 416
AC G V G++ F+ M Y + P++EH+ CM+ L + G L + + + M DP
Sbjct: 606 ACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPM 665
Query: 417 VLWGTLLWACRLHKNVSLGEEIAEFILS 444
+ + AC+ ++ LG A+ +++
Sbjct: 666 QMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 169/412 (41%), Gaps = 73/412 (17%)
Query: 50 LDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYA 106
L P +LN ++ +Y G + + LF P + W ++I A + SD+ +
Sbjct: 93 LPPIFLLNRAIE-AYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 107 RMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
RM V +F+ VL C +L+ R +HC V+K+ + + T +V Y +
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 163 DVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEY 222
+ A +VFDE+ S VS WNV++ Y
Sbjct: 212 VMSDARRVFDEIVNPSDVS---------------------------------WNVIVRRY 238
Query: 223 AQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
+ G +E +++F KML VRP T+ +V+ +C + ALE G+ IH+ +
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
V T++ DMY KC L+ AR++FD +D+ +W S + GYA+ G + EA LFD M
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 343 GV-------------------------------KPSDVTFVAVLTACGHSGLVSKGWEIF 371
+ +VT V +L C V G +
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 372 NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTLL 423
+ +G + + ++++ G+ G L+ R M D V W LL
Sbjct: 419 GFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 53 HPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARML 109
P ++ L Y G + +F + N WT+++ ++ + DQAL M
Sbjct: 351 QPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 110 AQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVF 165
+ P+ T ++VL C ++ + IHC+ +K P VS
Sbjct: 411 QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL--PNVSL------------- 455
Query: 166 SAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQN 225
VT+++ Y+K G LF+ +E R+V W MID Y +N
Sbjct: 456 ----------------VTSLMVMYSKCGVPEYPIRLFDRLE--QRNVKAWTAMIDCYVEN 497
Query: 226 GMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVG 285
+ +FR ML K RPD +T+ VL+ C L AL+ G+ +H ++ + V
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 286 TALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVK 345
++ MY KCG L A FD + + + W ++I Y + +A+ F++M G
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYD 405
P+ TF AVL+ C +G V + + FNLM Y ++P EH+ ++ LL R GR+EE
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Query: 406 L 406
L
Sbjct: 678 L 678
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 192/447 (42%), Gaps = 81/447 (18%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWT-----SIIHAHSHSDQALS 103
GL+ + L KL Y++ G + + +F+ + + NV+ W ++I LS
Sbjct: 141 GLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 104 FYARMLAQPVEPNAFTFSSVLH----GCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M V+ N ++ S+V L+ H IK + ++ ++ T LV Y
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G V A +VFDE+ ER +V AM+ A + R EA
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEA--------------------- 299
Query: 220 DEYAQNGMPNECLLLFRKMLA-EKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
L LFR M++ EK+ P+ + L +L G + AL+ G+ +H++V KN
Sbjct: 300 ------------LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 279 GVEVR-VGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFD 337
VE V + L+D+YCKCG + R++F R+ ++W +++ GYA +G ++ALR
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGR 396
M G +P VT VL C + +G EI +KN + P + ++ + +
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSK 465
Query: 397 AG----------RLEE---------------------GYDLVRGM---KTDPDSVLWGTL 422
G RLE+ G ++ R M K PDSV G +
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV 525
Query: 423 LWACRLHKNVSLGEEIAEFILSHNLAS 449
L C K + LG+E+ IL S
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFES 552
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 41/261 (15%)
Query: 52 PHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARM 108
P+ L L YS G + + LF+R NV WT++I + + + + M
Sbjct: 451 PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Query: 109 LAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDV 164
L P++ T VL C+ L+ + +H H++K S P+VS ++ Y + GD+
Sbjct: 511 LLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDL 570
Query: 165 FSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQ 224
SA FD ++ + ++ TA++ Y + R+A + C
Sbjct: 571 RSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA-------------INC---------- 607
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL-ESGRWIHSYVGNHKNGVEVR 283
F +M++ P+ T AVLS C Q G + E+ R+ + + +
Sbjct: 608 ----------FEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 284 VGTALVDMYCKCGSLDDARKI 304
+ ++++ +CG +++A+++
Sbjct: 658 HYSLVIELLNRCGRVEEAQRL 678
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
+R + + L Y+ G + +F+ N WTSII AH+ ++A+S
Sbjct: 312 KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAIS 371
Query: 104 FYARMLAQPVEPNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
+ M + + N T S+L C L + +H +IK ++ Y+ + LV Y
Sbjct: 372 LFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMI 219
+ G+ A V ++ SRDVV W MI
Sbjct: 432 KCGESRDAFNVLQQLP---------------------------------SRDVVSWTAMI 458
Query: 220 DEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNG 279
+ G +E L ++M+ E V P+ T + L +C +L GR IHS +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEM 339
V VG+AL+ MY KCG + +A ++FD++ ++++V+W +MIMGYA +G+ EAL+L M
Sbjct: 519 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 340 CGMGVKPSDVTFVAVLTACG 359
G + D F +L+ CG
Sbjct: 579 EAEGFEVDDYIFATILSTCG 598
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 180/380 (47%), Gaps = 51/380 (13%)
Query: 67 VGHLHHSVTLFNRTPTPNVFLWTSIIHAHSH---SDQALSFYARMLAQPVE-PNAFTFSS 122
+G L ++ +F+ P N WT++I + D+A + + + + N F
Sbjct: 130 LGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVC 189
Query: 123 VLHGCNLQA----ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
+L+ C+ +A R +H +++K V +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVGN-------------------------------- 217
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
L+ ++++ YA+ G L A F+ ME +DV+ W +I ++ G + + +F M
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMME--EKDVISWTAVISACSRKGHGIKAIGMFIGM 275
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
L P+E T+ ++L +C + AL GR +HS V +V VGT+L+DMY KCG +
Sbjct: 276 LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 299 DDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
D RK+FD + +R+ V W S+I +A G+ EEA+ LF M + +++T V++L AC
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 359 GHSGLVSKGWEIF-NLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSV 417
G G + G E+ ++KN +E + +V L + G + +++++ + + D V
Sbjct: 396 GSVGALLLGKELHAQIIKN--SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS-RDVV 452
Query: 418 LWGTLLWACRLHKNVSLGEE 437
W ++ C SLG E
Sbjct: 453 SWTAMISGCS-----SLGHE 467
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 64 YSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTF 120
Y G + + + P+ +V WT++I S H +AL F M+ + VEPN FT+
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 121 SSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
SS L C +L R+IH K S +V + L+ YA+ G V
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV------------ 537
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFR 236
EA +F+ M +++V W MI YA+NG E L L
Sbjct: 538 -------------------SEAFRVFDSMP--EKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 237 KMLAEKVRPDEITLLAVLSSCGQL 260
+M AE D+ +LS+CG +
Sbjct: 577 RMEAEGFEVDDYIFATILSTCGDI 600
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 282 VRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ G L+ + G L ARK+FD++ +++ V W +MI GY +G +EA LF++
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 342 MGVK-PSDVTFVAVLTACGHSGLVSKGWEIF-NLMKNGYG---MEPKIEHFGCMVNLLGR 396
G++ ++ FV +L C G ++ N++K G G +E + +F L
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTS 236
Query: 397 AGRLEEGYDLVRGMKTDPDSVLWGTLLWAC 426
A R +D M + D + W ++ AC
Sbjct: 237 ALR---AFD----MMEEKDVISWTAVISAC 259
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 82/107 (76%)
Query: 513 YLMLEEMNCRLKANGYTPKTDLVLHDIGEEQKELSLEVHSEKLALAFGLISTRPGTTIKI 572
Y+ L+ + ++ GY P+T VLHDI EE KE +L HSE+LA+AFG+I+T PGTTI++
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 573 VKNLRVCLDCHSVMKMMSKITGRKIITRDRNRFHHFENGSCSCGDYW 619
+KNLR+C DCH+ +K++S I R+II RD RFHHF +G+CSCGDYW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 220/479 (45%), Gaps = 31/479 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHA---HSHSD 99
+ G +P + L Y + +V L ++ PN + ++IH H+ +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+A++ RM+A+ +P+ FT+ +V++G ++ A ++ + K + + + T ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 156 GAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREA-RLLFEGMEAD-S 209
A +V A +F EM + ++V+ +++ C +GR +A RLL + +E +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
+VV ++ +ID + + G E L+ +M+ + PD T ++++ L+ + +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
+ + V L+ +CK +++ ++F + R + V +N++I G
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE 385
G + A ++F +M GV P +T+ +L G + K +F ++ MEP I
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIY 501
Query: 386 HFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIA 439
+ M+ + +AG++E+G+DL ++G+K P+ +++ T++ CR
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 440 EFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHE 498
E L +SGTY L G+ +A++ M+ G + +I V N +H+
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS-TISMVINMLHD 617
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 54/373 (14%)
Query: 84 NVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAIH 136
+V ++T+II A + + + AL+ + M + + PN T++S++ CN A +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKH 192
+I+ + + L+ A+ + G + AEK++DEM +RS+ + ++++ + H
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMID----------------EYAQNGM------- 227
RL EA+ +FE M + +VV +N +I E +Q G+
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 228 ---------PNECLL---LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+C + +F+KM+++ V PD IT +L + G LE + Y+
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEE 331
K ++ +++ CK G ++D +F ++ V +V+ + +MI G+ G EE
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMV 391
A LF EM G P+ T+ ++ A G + E+ M++ G ++
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC-GFVGDASTISMVI 612
Query: 392 NLLGRAGRLEEGY 404
N+L GRLE+ Y
Sbjct: 613 NML-HDGRLEKSY 624
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 169/382 (44%), Gaps = 22/382 (5%)
Query: 84 NVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLH-----GCNLQAARAI 135
+V+ +TS+I A ++S +A++ + +M +P T++ +L+ G ++
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+ +A Y L+ RG A +VF+EM V+ A+L Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 192 HGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
R +EA + M + S +V +N +I YA++GM +E + L +M + +PD T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI- 308
+LS + G +ES I + N + A + MY G + KIFD I
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 309 ---VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
+ D+V WN+++ + +G E +F EM G P TF +++A G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTL 422
+ ++ M + G+ P + + ++ L R G E+ ++ M + P+ + + +L
Sbjct: 507 QAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 423 LWACRLHKNVSLGEEIAEFILS 444
L A K + L +AE + S
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYS 587
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNV 217
R D F +K + M + S+V++ +++ K GR+ A +F G++ D S DV +
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAI--IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL------------ES 265
+I +A +G E + +F+KM + +P IT +L+ G++G
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 266 GRWIHSYVGN-----------HKNGVEVR-------------VGTALVDMYCKCGSLDDA 301
G +Y N H+ +V AL+D+Y K +A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 302 RKIFDNIV----DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
K+ + +V +V +NS+I YA G +EA+ L ++M G KP T+ +L+
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG---YDLVRGMKTDP 414
+G V IF M+N G +P I F + + G G+ E +D + P
Sbjct: 394 FERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 415 DSVLWGTLL 423
D V W TLL
Sbjct: 453 DIVTWNTLL 461
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 162/421 (38%), Gaps = 98/421 (23%)
Query: 82 TPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARA 134
+P++ + S+I A++ D+A+ +M + +P+ FT++++L G +++A +
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 135 IHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS----ERSLVSVTAMLTCYA 190
I + + Y G K+FDE++ +V+ +L +
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 191 KHGRLREARLLFEGME----ADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
++G E +F+ M+ R+ +N +I Y++ G + + ++R+ML V PD
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERET--FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 247 EITLLAVLSSCGQ----------LGALESGR----------WIHSYVGNHKNGV------ 280
T VL++ + L +E GR +H+Y + G+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 281 EVRVGT---------ALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGY---- 323
EV G LV + KC L +A + F + +R D+ NSM+ Y
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 324 ----------------------------------AIHGYSEEALRLFDEMCGMGVKPSDV 349
A G SEE LR E+ G+KP +
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR---EILAKGIKPDII 700
Query: 350 TFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRG 409
++ V+ A + + IF+ M+N G+ P + + + EE +VR
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 410 M 410
M
Sbjct: 760 M 760
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 136/330 (41%), Gaps = 56/330 (16%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRT----PTPNVFLWTSIIHAHSHS---D 99
R G P L +YS G ++T++ R TP++ + +++ A + +
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLH----GCNLQAARAIHCHVIKFAVASAPYVSTGLV 155
Q+ A M +PN T+ S+LH G + ++ V + + LV
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 156 GAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGMEAD--S 209
++ + AE+ F E+ ER + ++ +M++ Y + + +A + + M+ +
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
+ +N ++ ++++ + + R++LA+ ++PD I+ V+ +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA------------- 708
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
YC+ + DA +IF + + DV+ +N+ I YA
Sbjct: 709 ----------------------YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
EEA+ + M G +P+ T+ +++
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 19/246 (7%)
Query: 83 PNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAI 135
PN + S++HA+++ + S + + +EP A +++ C+ L A
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV-------SVTAMLTC 188
+ + + +V Y R V A V D M ER S+ M +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 189 YAKHGRLREA--RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
A G+ E +L +G++ D ++ +N +I Y +N + +F +M + PD
Sbjct: 677 SADFGKSEEILREILAKGIKPD---IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
IT + S E + Y+ H ++VD YCK D+A+ +
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 307 NIVDRD 312
++ + D
Sbjct: 794 DLRNLD 799
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 179/398 (44%), Gaps = 50/398 (12%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIH---AHSHSDQALSF 104
RG P I L +G + + LF R P P + ++ ++IH H D A +
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 105 YARMLAQ-PVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGD 163
+ M+ + P+ T++S+++G Y GLVG
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYG----------------------YWKEGLVGL------ 407
Query: 164 VFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNV 217
A +V +M + ++ S T ++ + K G++ EA + M AD + V +N
Sbjct: 408 ---ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
+I + + E + +FR+M + +PD T +++S ++ ++ W+ + +
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEAL 333
L++ + + G + +ARK+ + +V + D + +NS+I G G ++A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
LF++M G PS+++ ++ SG+V + E F G P I F ++N
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLING 643
Query: 394 LGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL-WACR 427
L RAGR+E+G + R ++ + PD+V + TL+ W C+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 213 VCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL-ESGRWIHS 271
V + +I ++ NE L L +M PD T V+ + + E+ + ++
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSEE 331
+ ++ G L++ CK G +D A+ +F I ++V +N++I G+ HG ++
Sbjct: 313 MLIRGFAPDDITYG-YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 332 ALRLFDEMC-GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
A + +M G+ P T+ +++ GLV E+ + M+N G +P + + +
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTIL 430
Query: 391 VNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWA-CRLHK 430
V+ + G+++E Y+++ M D P++V + L+ A C+ H+
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 132/332 (39%), Gaps = 58/332 (17%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHS---DQ 100
+G P+ L + +G + + + N PN + +I A +
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
A+ + M + +P+ +TF+S++ G ++ A + +I V + L+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 157 AYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD---S 209
A+ R G++ A K+ +EM S ++ +++ + G + +AR LFE M D
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
++ C N++I+ ++GM E + ++M+ PD +T
Sbjct: 598 SNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF------------------- 637
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAI 325
+L++ C+ G ++D +F + + D V +N+++
Sbjct: 638 ----------------NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
G+ +A L DE G P+ T+ +L +
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 54/374 (14%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAI 135
P V ++ +II + H D AL+ + M + + PN T+SS++ CN A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+I+ + + + L+ A+ + G + AEK++DEM +RS+ V+ ++++ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 192 HGRLREARLLFEGMEADS--RDVVCWNVMID----------------EYAQNGM------ 227
H RL EA+ +FE M + DVV +N +I E +Q G+
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 228 ----------PNECLL---LFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+C + +F++M+++ V P+ +T +L + G LE + Y+
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSE 330
K + +++ CK G ++D +F N+ V DVVA+N+MI G+ G E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA LF EM G P+ + ++ A G E+ M++ G G +
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC-GFAGDASTIGLV 612
Query: 391 VNLLGRAGRLEEGY 404
N+L GRL++ +
Sbjct: 613 TNML-HDGRLDKSF 625
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 216/479 (45%), Gaps = 31/479 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHA---HSHSD 99
+ G +P+ + L Y + +V L ++ PN + ++IH H+ +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVI----KFAVASAPYVSTGLV 155
+A++ RM+A+ +P+ T+ V++G + + +++ + + + ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 156 GAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREA-RLLFEGMEAD-S 209
+ + A +F EM + ++V+ +++++C +GR +A RLL + +E +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
DV ++ +ID + + G E L+ +M+ + P +T ++++ L+ + +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
++ + +V L+ +CK +++ ++F + R + V +N +I G
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE 385
G + A +F EM GV P+ +T+ +L +G + K +F ++ MEP I
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIY 502
Query: 386 HFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIA 439
+ M+ + +AG++E+G+DL ++G+K PD V + T++ CR
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK--PDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 440 EFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHE 498
E L +SG Y L G+ +A++ M+ G + +I V N +H+
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-ASTIGLVTNMLHD 618
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 202/422 (47%), Gaps = 34/422 (8%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P+ +T+++H H+ + +A++ RM+ + +P+ T+ +V++G + + ++
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 140 I----KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+ K + + + + ++ + + V A +F EM + + + +++++C
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 192 HGRLREA-RLLFEGMEAD-SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
+GR +A RLL + +E + +VV +N +ID +A+ G E LF +M+ + P+ +T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
++++ L+ + I + + + +V L++ +CK + D ++F ++
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 310 DR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
R + V + ++I G+ + A +F +M GV P+ +T+ +L +G +
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLWG 420
K +F ++ MEP I + M + +AG++E+G+DL ++G+K PD + +
Sbjct: 468 KAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK--PDVIAYN 524
Query: 421 TLLWA-CRLHKNVSLGEEIAEFILSHN----LASSGTYVLLSNIYAASGNWVGAAKVRSL 475
T++ C+ L EE + L SGTY L + G+ +A++
Sbjct: 525 TMISGFCK----KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Query: 476 MK 477
M+
Sbjct: 581 MR 582
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 171/373 (45%), Gaps = 54/373 (14%)
Query: 84 NVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAIH 136
+V +++++I + + H D AL+ + M + + P+ FT+SS++ CN A +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKH 192
+++ + L+ A+A+ G + AEK+FDEM +RS+ V+ +++ + H
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMIDEYAQ-----NGMP----------------- 228
RL EA+ +F M + DVV +N +I+ + + +GM
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 229 -------------NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGN 275
+ ++F++M+++ V P+ +T +L + G LE + Y+
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 276 HKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEE 331
K ++ + + CK G ++D +F ++ V DV+A+N+MI G+ G EE
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMV 391
A LF +M G P T+ ++ A G + E+ M++ +G +
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR-FAGDASTYGLVT 597
Query: 392 NLLGRAGRLEEGY 404
++L GRL++G+
Sbjct: 598 DML-HDGRLDKGF 609
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 189/472 (40%), Gaps = 77/472 (16%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTPNVFLWTSIIHAHSHS---DQALS 103
R L + +L+ KL + G + S P P++ ++ ++ A + D +S
Sbjct: 33 REKLSRNALLHLKLDEAVDLFGEMVKS------RPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 104 FYARMLAQPVEPNAFTFSSVLHGC-----NLQAARAIHCHVIKFAVASAPYVSTGLVGAY 158
F +M V N +T++ ++ C L A AI ++K + L+ +
Sbjct: 87 FGEKMEILGVSHNLYTYN-IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF 145
Query: 159 ARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREA-----RLLFEGMEAD- 208
G + A + D+M E V+ T ++ +H + EA R++ +G + D
Sbjct: 146 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 205
Query: 209 -------------------------------SRDVVCWNVMIDEYAQNGMPNECLLLFRK 237
DVV ++ +ID + ++ L LF +
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 238 MLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGS 297
M + +RPD T +++S G + S + K V +L+D + K G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 298 LDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
L +A K+FD ++ R ++V +NS+I G+ +H +EA ++F M P VT+
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
++ + V G E+F M G+ + +++ +A + + + M +D
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 414 ---PDSVLWGTLLWACRLHKNVSLGEEIAEF-----------ILSHNLASSG 451
P+ + + TLL L KN L + + F I ++N+ S G
Sbjct: 445 GVHPNIMTYNTLLDG--LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 213/469 (45%), Gaps = 38/469 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHS---DQA 101
G+ P+ + L S H + LF+R PN ++ +I D A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGLVGA 157
LSF M+ ++ + + ++S+++G C ++ AA +I + T L+G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 158 YARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGM-EADSR-D 211
Y G + A +++ EM+ + S+ + T +L+ + G +R+A LF M E + + +
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT---LLAVLSSCGQLGALESGRW 268
V +NVMI+ Y + G ++ ++M + + PD + L+ L GQ A E+ +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ--ASEAKVF 599
Query: 269 IHSYVGNHKNGVEVR--VGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMG 322
+ G HK E+ T L+ +C+ G L++A + +V R D+V + +I G
Sbjct: 600 VD---GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 323 YAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
H + L EM G+KP DV + +++ A +G + + I++LM N G P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVP 715
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMK---TDPDSVLWGTLL-WACRLHKNVSLGEEI 438
+ ++N L +AG + E L M+ + P+ V +G L + ++ E+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 439 AEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGC 487
IL LA++ TY +L + G A+++ + M G GV P C
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--SPDC 822
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 201/479 (41%), Gaps = 34/479 (7%)
Query: 69 HLHHSVTLFNRTPT----PNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFS 121
H ++ LFN + P+V+++T +I + +A A M A + N ++
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN 266
Query: 122 SVLHG-CNLQAA-RAIHCHVIKFAVASAPYVST--GLVGAYARGGDVFSAEKVFDEM--- 174
++ G C Q A+ P V T LV + + ++ DEM
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 175 -SERSLVSVTAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQNGMPNEC 231
S +V++++ K G++ EA L + + S ++ +N +ID + +E
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 232 LLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDM 291
LLF +M +RP+++T ++ + G L++ + + + V +L++
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 292 YCKCGSLDDARKIFDNIVDRD----VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPS 347
+CK G + A ++++ VV + S++ GY G +ALRL+ EM G G+ PS
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
TF +L+ +GL+ ++FN M + ++P + M+ G + + ++ +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 408 RGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLA-SSGTYVLLSNIYAAS 463
+ M PD+ + L+ L S + + + N + Y L + +
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCR 522
G A V M GV+ + C + I G L+H + + +L+EM+ R
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGV--------LIDGSLKHKDRKLFFGLLKEMHDR 676
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 156/388 (40%), Gaps = 44/388 (11%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHAHSHS---DQ 100
+G+ P L G + +V LFN PN + +I + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNL--QAARA------IHCHVIKFAVASAPYVST 152
A F M + + P+ +++ ++HG L QA+ A +H K T
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH----KGNCELNEICYT 616
Query: 153 GLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAK--HGRLR-EARLLFEGM--EA 207
GL+ + R G + A V EM +R V L CY G L+ + R LF G+ E
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRG---VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 208 DSR----DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL 263
R D V + MID ++ G E ++ M+ E P+E+T AV++ + G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 264 ESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKI-FDNIVDRDVVA----WNS 318
+ S + + +D+ K G +D + + N + + ++A +N
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 319 MIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGY 378
+I G+ G EEA L M G GV P +T+ ++ V K E++N M
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK- 851
Query: 379 GMEPK------IEHFGCMVNLLGRAGRL 400
G+ P + H C+ +G+A L
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATEL 879
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 180/430 (41%), Gaps = 46/430 (10%)
Query: 67 VGHLHHSVTLFN-RTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSS 122
+ HH + L + TP+V ++++++ + D+ M + ++PN++ + S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 123 VL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
++ C L A +I+ + V T L+ + + GD+ +A K F EM R
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
+ + DV+ + +I + Q G E LF +M
Sbjct: 382 I-----------------------------TPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
+ + PD +T +++ + G ++ +H+++ V T L+D CK G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 299 DDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
D A ++ + + ++ +NS++ G G EEA++L E G+ VT+ +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD- 413
+ A SG + K EI M G G++P I F ++N G LE+G L+ M
Sbjct: 533 MDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 414 --PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG-TYVLLSNIYAASGNWVGAA 470
P++ + +L+ + N+ I + + S + G TY L + + N A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 471 KVRSLMKGSG 480
+ MKG G
Sbjct: 652 FLFQEMKGKG 661
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 162/363 (44%), Gaps = 22/363 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLF----NRTPTPNVFLWTSIIHAHSHSD--- 99
R+G+ P ++ L + G + + F +R TP+V +T+II
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+A + M + +EP++ TF+ +++G C +++ A +H H+I+ + T L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 156 GAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--S 209
+ GD+ SA ++ EM + ++ + +++ K G + EA L EA +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
D V + ++D Y ++G ++ + ++ML + ++P +T +++ G LE G +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
+++ +LV YC +L A I+ ++ R D + +++ G+
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGYGMEPKI 384
+EA LF EM G G S T+ ++ + E+F+ M + G + +I
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 385 EHF 387
F
Sbjct: 704 FDF 706
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 134/300 (44%), Gaps = 11/300 (3%)
Query: 193 GRLREAR--LLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
GR++EA LL ++ + DV+ ++ +++ Y + G ++ L M + ++P+
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++ ++ L S + + V T L+D +CK G + A K F +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 311 RD----VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
RD V+ + ++I G+ G EA +LF EM G++P VTF ++ +G +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTLL 423
+ + N M G P + + +++ L + G L+ +L+ M P+ + +++
Sbjct: 440 AFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 424 WACRLHKNVSLGEE-IAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
N+ + + EF + A + TY L + Y SG A ++ M G G++
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 180/430 (41%), Gaps = 46/430 (10%)
Query: 67 VGHLHHSVTLFN-RTPTPNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSS 122
+ HH + L + TP+V ++++++ + D+ M + ++PN++ + S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 123 VL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS 178
++ C L A +I+ + V T L+ + + GD+ +A K F EM R
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 179 LVSVTAMLTCYAKHGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKM 238
+ + DV+ + +I + Q G E LF +M
Sbjct: 382 I-----------------------------TPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 239 LAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSL 298
+ + PD +T +++ + G ++ +H+++ V T L+D CK G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 299 DDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAV 354
D A ++ + + ++ +NS++ G G EEA++L E G+ VT+ +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD- 413
+ A SG + K EI M G G++P I F ++N G LE+G L+ M
Sbjct: 533 MDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 414 --PDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG-TYVLLSNIYAASGNWVGAA 470
P++ + +L+ + N+ I + + S + G TY L + + N A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 471 KVRSLMKGSG 480
+ MKG G
Sbjct: 652 FLFQEMKGKG 661
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 162/363 (44%), Gaps = 22/363 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLF----NRTPTPNVFLWTSIIHAHSHSD--- 99
R+G+ P ++ L + G + + F +R TP+V +T+II
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+A + M + +EP++ TF+ +++G C +++ A +H H+I+ + T L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 156 GAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--S 209
+ GD+ SA ++ EM + ++ + +++ K G + EA L EA +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
D V + ++D Y ++G ++ + ++ML + ++P +T +++ G LE G +
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
+++ +LV YC +L A I+ ++ R D + +++ G+
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM-KNGYGMEPKI 384
+EA LF EM G G S T+ ++ + E+F+ M + G + +I
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 385 EHF 387
F
Sbjct: 704 FDF 706
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 134/300 (44%), Gaps = 11/300 (3%)
Query: 193 GRLREAR--LLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
GR++EA LL ++ + DV+ ++ +++ Y + G ++ L M + ++P+
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++ ++ L S + + V T L+D +CK G + A K F +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 311 RD----VVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
RD V+ + ++I G+ G EA +LF EM G++P VTF ++ +G +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTLL 423
+ + N M G P + + +++ L + G L+ +L+ M P+ + +++
Sbjct: 440 AFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 424 WACRLHKNVSLGEE-IAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVE 482
N+ + + EF + A + TY L + Y SG A ++ M G G++
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 201/421 (47%), Gaps = 32/421 (7%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P+ +T++IH H+ + +A++ RM+ + +PN T+ V++G + + ++
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 140 IK----FAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
+ + + + ++ + + V A +F EM + ++V+ +++++C
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 192 HGRLREARLLFEGM--EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
+GR +A L M + + ++V +N +ID + + G E L+ M+ + PD T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
++++ L+ + + ++ + +V L+ +CK ++D ++F +
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 310 DR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
R D V + ++I G G + A ++F +M GV P +T+ +L ++G +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLWG 420
K E+F+ M+ ++ I + M+ + +AG++++G+DL ++G+K P+ V +
Sbjct: 488 KALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK--PNVVTYN 544
Query: 421 TLLWA-CR---LHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLM 476
T++ C L + +L +++ E L +SGTY L + G+ +A++ M
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKE---DGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 477 K 477
+
Sbjct: 602 R 602
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 175/403 (43%), Gaps = 60/403 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTP----NVFLWTSIIHA---HSHSD 99
+RG P+ + + G ++ L N+ +V ++ +II + + H D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAIHCHVIKFAVASAPYVSTGLV 155
AL+ + M + + PN T+SS++ C+ A + +I+ + L+
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 156 GAYARGGDVFSAEKVFDEMSERS----LVSVTAMLTCYAKHGRLREARLLFEGMEADS-- 209
A+ + G AEK++D+M +RS + + +++ + H RL +A+ +FE M +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
DVV +N +I + ++ + LFR+M + D +T
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY------------------- 438
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAI 325
T L+ G D+A+K+F +V D++ ++ ++ G
Sbjct: 439 ----------------TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIE 385
+G E+AL +FD M +K + ++ +G V GW++F + + G++P +
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVV 541
Query: 386 HFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWA 425
+ M++ L L+E Y L++ MK D P+S + TL+ A
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 148/340 (43%), Gaps = 18/340 (5%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVG 156
AL+ +M+ EP+ T SS+L HG + A A+ +++ T L+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 157 AYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGMEADS--R 210
A + D M +R +LV+ ++ K G A L MEA
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
DVV +N +ID + ++ L LF++M + +RP+ +T +++S G +
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIH 326
S + K + AL+D + K G +A K++D+++ R D+ +NS++ G+ +H
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 327 GYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEH 386
++A ++F+ M P VT+ ++ S V G E+F M + G+
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVT 437
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
+ ++ L G + + + M +D PD + + LL
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 153/327 (46%), Gaps = 16/327 (4%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
A SF +M+ EP+ TF+S+++G C ++ A ++ +++ + + T ++
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 157 AYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEAD--SR 210
+ + G V A +FD+M + V T+++ GR R+A L GM
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
DV+ +N +ID + + G + L+ +M+ + P+ T ++++ G ++ R +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIH 326
+ +V T+L++ +CKC +DDA KIF + + + + + ++I G+
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 327 GYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGY--GMEPKI 384
G A +F M GV P+ T+ +L ++G V K IF M+ G+ P I
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 385 EHFGCMVNLLGRAGRLEEGYDLVRGMK 411
+ +++ L G+LE+ + M+
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMR 452
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 168/388 (43%), Gaps = 59/388 (15%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHA---HSHSD 99
+ G +P + L + + ++++ N+ P+V ++T+II + + H +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CN---LQAARAIHCHVIKFAVASAPYVSTGLV 155
ALS + +M + P+ ++S+++G CN + A ++ + K + L+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 156 GAYARGGDVFSAEKVFDEMSERSLV----SVTAMLTCYAKHGRLREARLLFEGMEADS-- 209
A+ + G AE++++EM S+ + T+++ + G + EAR +F ME
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
DVV + +I+ + + ++ + +F +M + + + IT ++ GQ+G + +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 270 HSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD-------VVAWNSMIMG 322
S++ + +R L+ C G + A IF+++ R+ + +N ++ G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 323 YAIHGYSEEALRLFDEM--------------------------------CGM---GVKPS 347
+G E+AL +F++M C + GVKP+
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 348 DVTFVAVLTACGHSGLVSKGWEIFNLMK 375
VT+ +++ GL + +F MK
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 9/260 (3%)
Query: 229 NECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTAL 288
NE L LF M+ + P I +L+ ++ + + ++ ++ L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 289 VDMYCKCGSLDDARKIFDNIV----DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGV 344
++ +C+ A ++ + D+V + S+I G+ + EEA+ + ++M MG+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 345 KPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY 404
KP V + ++ + +G V+ +F+ M+N YG+ P + + +VN L +GR +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 405 DLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASS-GTYVLLSNIY 460
L+RGM K PD + + L+ A EE+ ++ ++A + TY L N +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 461 AASGNWVGAAKVRSLMKGSG 480
G A ++ LM+ G
Sbjct: 293 CMEGCVDEARQMFYLMETKG 312
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 11/314 (3%)
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
S++ T +L AK + L + ++ S D+ N++++ + Q+ P
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
KM+ PD +T ++++ +E + + + +V + T ++D CK
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 296 GSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
G ++ A +FD + + DVV + S++ G G +A L M +KP +TF
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
A++ A G E++N M + P I + ++N G ++E + M+
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 412 TD---PDSVLWGTLLWA-CRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWV 467
T PD V + +L+ C+ K + E ++ TY L + G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 468 GAAKVRSLMKGSGV 481
A +V S M GV
Sbjct: 370 VAQEVFSHMVSRGV 383
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 169/347 (48%), Gaps = 20/347 (5%)
Query: 83 PNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAI 135
P+V ++++II H A ++ ML + + PN FT++ ++ G C+ A+ +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+I+ + L+ A + G +F AEK+ DEM R + V+ +M+ + K
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLL 251
H R +A+ +F+ M S DVV +N +ID Y + +E + L R++ + + T
Sbjct: 414 HNRFDDAKHMFDLMA--SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI--- 308
++ ++ L + + + + +H + L+ +C+ L++A ++F+ I
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 309 -VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA-CGHSGLVSK 366
+D D VA+N +I G +EA LF + GV+P T+ +++ CG S +S
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISD 590
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
+F+ MK+ G EP + ++ +AG +++ +L+ M+++
Sbjct: 591 ANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 162/362 (44%), Gaps = 38/362 (10%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPY-VSTGLVGAYA 159
+LS + ++ +P+ TF+++LHG L+ I A+A Y V TG + A A
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR-------ISEALALFGYMVETGFLEAVA 212
Query: 160 RGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADSR--DVV 213
+FD+M E L ++ ++ GR+ EA L M DVV
Sbjct: 213 ----------LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
+ +++ + G L L KM ++PD + A++ + G +++ S +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYS 329
V ++D +C G DA+++ ++++R DV+ +N++I G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTA-CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EA +L DEM + P VT+ +++ C H+ +F+LM + P + F
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF-DDAKHMFDLMAS-----PDVVTFN 436
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSH 445
++++ RA R++EG L+R + ++ + TL+ N++ +++ + ++SH
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 446 NL 447
+
Sbjct: 497 GV 498
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 169/347 (48%), Gaps = 20/347 (5%)
Query: 83 PNVFLWTSIIH---AHSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAI 135
P+V ++++II H A ++ ML + + PN FT++ ++ G C+ A+ +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+I+ + L+ A + G +F AEK+ DEM R + V+ +M+ + K
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 192 HGRLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLL 251
H R +A+ +F+ M S DVV +N +ID Y + +E + L R++ + + T
Sbjct: 414 HNRFDDAKHMFDLMA--SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 252 AVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI--- 308
++ ++ L + + + + +H + L+ +C+ L++A ++F+ I
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 309 -VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA-CGHSGLVSK 366
+D D VA+N +I G +EA LF + GV+P T+ +++ CG S +S
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA-ISD 590
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD 413
+F+ MK+ G EP + ++ +AG +++ +L+ M+++
Sbjct: 591 ANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 38/360 (10%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPY-VSTGLVGAYA 159
+LS + ++ +P+ TF+++LHG L+ I A+A Y V TG + A A
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR-------ISEALALFGYMVETGFLEAVA 212
Query: 160 RGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADSR--DVV 213
+FD+M E L ++ ++ GR+ EA L M DVV
Sbjct: 213 ----------LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
+ +++ + G L L KM ++PD + A++ + G +++ S +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYS 329
V ++D +C G DA+++ ++++R DV+ +N++I G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTA-CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EA +L DEM + P VT+ +++ C H+ +F+LM + P + F
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF-DDAKHMFDLMAS-----PDVVTFN 436
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIAEFILSH 445
++++ RA R++EG L+R + ++ + TL+ N++ +++ + ++SH
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 212/487 (43%), Gaps = 50/487 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHA---HSHSD 99
+ G +P + L Y + +V L ++ P+ F +T++IH H+ +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGC--------------NLQAARAIHCHVIKFAVA 145
+A++ +M+ + +P+ T+ +V++G ++AAR I +V+ F
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR-IKANVVIF--- 261
Query: 146 SAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLL 201
++ + + V A +F EM + ++V+ +++ C +GR +A L
Sbjct: 262 ------NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 202 FEGM--EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQ 259
M + + +VV +N +ID + + G E L +M+ + PD IT +++
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 260 LGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVA 315
L+ + + ++ + ++ L++ +CKC ++D ++F + R + V
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMK 375
+ ++I G+ G + A +F +M V +T+ +L G + IF ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 376 NGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTDPDSVLWGTL---LWACRLHKNV 432
ME I + M+ + +AG++ E +DL + PD V + T+ L + RL +
Sbjct: 496 KS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 433 -SLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIE 491
L ++ E L +SGTY L + +A++ M+ SG + +I
Sbjct: 555 DDLFRKMKE---DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAS-TISL 610
Query: 492 VNNRIHE 498
V N +H+
Sbjct: 611 VTNMLHD 617
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 17/308 (5%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHG-CN---LQAARAIH 136
+++ ++ I+ Q AL+ A+M+ EP+ T SS+L+G C+ + A A+
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKH 192
+++ + T L+ A + D+M +R LV+ ++ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 193 GRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G + A L MEA +VV +N +ID + + LF +M + +RP+ +T
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
++++ G + S + K V AL+D + K G L +A K+ + ++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 311 R----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
R D + +N +I G+ +H +EA ++F M P+ T+ ++ V
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 367 GWEIFNLM 374
G E+F M
Sbjct: 417 GVELFREM 424
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGMEA--DSRDVVCWNVMIDEYAQNGMPNECLLLF 235
S+V +L+ AK + L E M+ S D+ +++ I+ + + + L +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 236 RKMLAEKVRPDEITL----------------LAVLSSCGQLG---------ALESGRWIH 270
KM+ PD +TL +A++ ++G L G ++H
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 271 SYVGNHKNGVE-----------VRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVA 315
+ V+ V GT +V+ CK G +D A + + + + +VV
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGT-VVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 316 WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMK 375
+N++I + + E A+ LF EM G++P+ VT+ +++ + G S + + M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 376 NGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTLLWACRLHKNV 432
+ P + F +++ + G+L E L M DPD++ + L+ +H +
Sbjct: 321 EK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 433 SLGEEIAEFILSHN-LASSGTYVLLSN 458
+++ +F++S + L + TY L N
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLIN 406
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 180/369 (48%), Gaps = 28/369 (7%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
P+ +T++IH H+ + +A++ RM+ + +PN T+ V++G ++ A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
+ + + + + ++ + + A +F EM + ++++ +++++C
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 192 HGRLREA-RLLFEGMEAD-SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
+ R +A RLL + +E + +VV +N +ID + + G E L+ +M+ + PD T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
++++ L+ + + + + V L++ +CK +D+ ++F +
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 310 DRDVVAWNSMIMGYAIHGY-----SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
R +V N++ IHG+ + A +F +M GV P+ +T+ +L +G +
Sbjct: 428 QRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLW 419
K +F ++ MEP I + M+ + +AG++E+G+DL ++G+K PD +++
Sbjct: 487 EKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PDVIIY 543
Query: 420 GTLLWA-CR 427
T++ CR
Sbjct: 544 NTMISGFCR 552
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 159/360 (44%), Gaps = 56/360 (15%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTP----NVFLWTSIIHA---HSHSD 99
+RG P+ + + G + + L N+ NV +++++I + + H D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNLQA---ARAIHCHVIKFAVASAPYVSTGLV 155
AL+ + M + V PN T+SS++ CN + A + +I+ + L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 156 GAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADS-- 209
A+ + G + AEK++DEM +RS+ + ++++ + H RL EA+ +FE M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 210 RDVVCWNVMID----------------EYAQNGMPNECL-------------------LL 234
+VV +N +I+ E +Q G+ + ++
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F++M+++ V P+ +T +L + G LE + Y+ K + +++ CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 295 CGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
G ++D +F ++ V DV+ +N+MI G+ G EEA LF +M G P T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 157/360 (43%), Gaps = 21/360 (5%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIH 136
N++ + +I+ Q AL+ +M+ EP+ T SS+L HG + A A+
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKH 192
+++ T L+ A + D M +R +LV+ ++ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G + A L MEA +VV ++ +ID + ++ L LF +M + VRP+ IT
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++S + S + K V AL+D + K G L +A K++D ++
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 311 R----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
R D+ ++S+I G+ +H +EA +F+ M P+ VT+ ++ + + +
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
G E+F M G+ + +++ +A + + + M +D P+ + + TLL
Sbjct: 419 GVELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 194/426 (45%), Gaps = 36/426 (8%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P+ + ++I +A+ RM+ +P+ T++S+++G ++ +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 140 IKFA----VASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
++ V + + + ++ + R G + +A +F EM + S+V+ +++ K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 192 HGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
G+ + LL + M + +V+ +NV++D + + G E L+++M+ + P+ IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 250 LLAVLSS-CGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
++ C Q E+ + V N K ++ T+L+ YC +DD K+F NI
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 309 VDRDVVA----WNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
R +VA ++ ++ G+ G + A LF EM GV P +T+ +L +G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLV-----RGMKTDPDSVLW 419
K EIF ++ M+ I + ++ + + G++E+ ++L +G+K P+ + +
Sbjct: 455 EKALEIFEDLQKS-KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK--PNVMTY 511
Query: 420 GTLLWACRLHKNVSLGEEIAEFILSH-----NLASSGTYVLLSNIYAASGNWVGAAKVRS 474
++ L K SL E A +L N + TY L + G+ +AK+
Sbjct: 512 TVMISG--LCKKGSLSE--ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 475 LMKGSG 480
MK G
Sbjct: 568 EMKSCG 573
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 197/460 (42%), Gaps = 28/460 (6%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHA---HSHSDQ 100
+G+ P + L +YSS G + + L N P +P V+ + ++I+ H ++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 101 ALSFYARMLAQPVEPNAFTFSSVL-HGC---NLQAARAIHCHVIKFAVASAPYVSTGLVG 156
A +A ML + P++ T+ S+L C ++ + + V + ++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 157 AYARGGDVFSAEKVFDEMSERSLVS----VTAMLTCYAKHGRLREARLLFEGM--EADSR 210
+ R G++ A F+ + E L+ T ++ Y + G + A L M + +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
DVV +N ++ + M E LF +M + PD TL ++ +LG L++ +
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDV----VAWNSMIMGYAIH 326
+ + ++V L+D + K G +D A++I+ ++V +++ ++++ ++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 327 GYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEH 386
G+ EA R++DEM +KP+ + +++ SG S G M + G P
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCIS 622
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTD-----PDSVLWGTLLWA-CRLHKNVSLGEEIAE 440
+ ++ R + + + LV+ M+ + PD + ++L CR ++ + +
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 441 FILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
I TY + N + + N A ++ M G
Sbjct: 683 MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 145/347 (41%), Gaps = 23/347 (6%)
Query: 25 LAALIDRSKSXXXXXXXXXXXXRRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTP- 83
+ +L RS + GL P ++ L + Y G + ++ L N
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 84 ---NVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAAR 133
+V + +I+H +A + M + + P+++T + ++ G C NLQ A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 134 AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCY 189
+ + + + L+ + + GD+ +A++++ +M + + +S + ++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 190 AKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
G L EA +++ M + + V+ N MI Y ++G ++ KM++E PD
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGV--EVRVGTALVDMYCKCGSLDDA---- 301
I+ ++ + + + + + G+ +V +++ +C+ + +A
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 302 RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
RK+ + V+ D + MI G+ EA R+ DEM G P D
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 163/347 (46%), Gaps = 18/347 (5%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAI 135
P V ++ +II A + + + AL+ + M + + PN T++S++ CN A +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+I+ + + L+ A+ + G + AEK++DEM +RS+ + ++++ +
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 192 HGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
H RL EA+ +FE M + +VV +N +I + + +E + LFR+M + + +T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI- 308
++ Q ++ + + + + ++ + L+D C G ++ A +F+ +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 309 ---VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
++ D+ +N MI G G E+ LF + GVKP+ VT+ +++ GL
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
+ +F MK G P + ++ R G +L+R M++
Sbjct: 554 EADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 157/360 (43%), Gaps = 21/360 (5%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIH 136
N++ ++ +I+ Q AL+ A+M+ EP+ T +S+L HG + A ++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKH 192
+++ + L+ R A + D M + LV+ ++ K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 193 GRLREARLLFEGMEADSRD--VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G + A L + ME + VV +N +ID N+ L LF +M + +RP+ +T
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++ G + S + K V +AL+D + K G L +A K++D ++
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 311 R----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
R D+ ++S+I G+ +H +EA +F+ M P+ VT+ ++ + V +
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
G E+F M G+ + +++ +A + + + M +D PD + + LL
Sbjct: 415 GMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 21/368 (5%)
Query: 133 RAIHC--HVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM----SERSLVSVTAML 186
AI C + +F V GL+ +A+ G ++ F +M + ++ + M+
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 187 TCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
C K G + AR LFE M+ D V +N MID + + G ++ + F +M
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 245 PDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV--GTALVDMYCKCGSLDDAR 302
PD IT A+++ + G L G + Y NG++ V + LVD +CK G + A
Sbjct: 330 PDVITYNALINCFCKFGKLPIG--LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 303 KIFDNIVDRDVV----AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTAC 358
K + ++ +V + S+I G +A RL +EM +GV+ + VT+ A++
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL---VRGMKTDPD 415
+ + + E+F M G+ P + + +++ +A ++ +L ++G PD
Sbjct: 448 CDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 416 SVLWGTLLWA-CRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRS 474
+L+GT +W C L K + + E A+S Y L + Y SGN +
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 475 LMKGSGVE 482
MK +E
Sbjct: 567 EMKELDIE 574
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 174/431 (40%), Gaps = 55/431 (12%)
Query: 48 RGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHSDQ--- 100
RGL P + + + VG L +V F P+V + ++I+ +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHG-CN---LQAARAIHCHVIKFAVASAPYVSTGLVG 156
L FY M ++PN ++S+++ C +Q A + + + + Y T L+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 157 AYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--R 210
A + G++ A ++ +EM E ++V+ TA++ R++EA LF M+
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
++ +N +I + + + L L ++ ++PD + + L +E+ + +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
+ + + T L+D Y K G+
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGN-------------------------------PT 559
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
E L L DEM + ++ + VTF ++ + LVSK + FN + N +G++ F M
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 391 VNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNV----SLGEEIAEFIL 443
++ L + ++E L M PD + +L+ NV +L +++AE +
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 444 SHNLASSGTYV 454
+L + + V
Sbjct: 680 KLDLLAYTSLV 690
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 35/335 (10%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALES-GRWIHSYV 273
++V+ID GM E + F KM +V P + +L +LG + R+ +
Sbjct: 199 FSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYS 329
G V ++D CK G ++ AR +F+ + R D V +NSMI G+ G
Sbjct: 255 GAGARPT-VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 330 EEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGC 389
++ + F+EM M +P +T+ A++ G + G E + MK G G++P + +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-GNGLKPNVVSYST 372
Query: 390 MVNLLGRAGRLEEG---YDLVRGMKTDPDSVLWGTLLWA-CR---LHKNVSLGEEIAEFI 442
+V+ + G +++ Y +R + P+ + +L+ A C+ L LG E+ +
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 443 LSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAG 502
+ N+ TY L + + A ++ M +GV ++ N IH F+
Sbjct: 433 VEWNVV---TYTALIDGLCDAERMKEAEELFGKMDTAGVIP----NLASYNALIHGFV-- 483
Query: 503 DLRHPKSQDIYLMLEEMNCRLKANGYTPKTDLVLH 537
K++++ LE +N LK G P DL+L+
Sbjct: 484 -----KAKNMDRALELLN-ELKGRGIKP--DLLLY 510
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 150/359 (41%), Gaps = 29/359 (8%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHAH---SHSDQA 101
GL P+ + L ++ G + ++ + PN + +TS+I A+ + A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHG-CNLQAARAIHCHVIKFAVASA-PYVST--GLVGA 157
ML VE N T+++++ G C+ + + K A P +++ L+
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 158 YARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFE-----GMEAD 208
+ + ++ A ++ +E+ R L+ + ++ A+++ G++A+
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 209 SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSS-CGQLGALESGR 267
S + + ++D Y ++G P E L L +M + +T ++ C ++
Sbjct: 542 S---LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 268 WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGY 323
+ + + + TA++D CK ++ A +F+ +V + D A+ S++ G
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
G EAL L D+M +G+K + + +++ H + K M G G+ P
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI-GEGIHP 716
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 176/397 (44%), Gaps = 54/397 (13%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
P+ +T++IH H+ + +A++ RM+ + +PN T+ V++G ++ A +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
+ + + + ++ + + V A +F EM + ++V+ +++++C
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 192 HGRLREARLLFEGM--EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
+GR +A L M + + ++V +N +ID + + G E L M+ + PD T
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
++++ L+ + + ++ + ++ L+ +CK ++D ++F +
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 310 DR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
R D V + ++I G G + A ++F +M GV P +T+ +L ++G +
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 366 KGWEIFNLMK-------------------------NGY---------GMEPKIEHFGCMV 391
K E+F+ M+ +G+ G++P + + M+
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 392 NLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWA 425
+ L L+E Y L++ MK D PDS + TL+ A
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 155/360 (43%), Gaps = 21/360 (5%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVL----HGCNLQAARAIH 136
N++ + +I+ Q AL+ +M+ EP+ T SS+L HG + A A+
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKH 192
+++ T L+ A + D M +R +LV+ ++ K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G + A L MEA DVV +N +ID + ++ L LF++M + +RP+ +T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++S G + S + K + AL+D + K G +A K+ D+++
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 311 R----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
R D+ +NS+I G+ +H ++A ++F+ M P T+ ++ S V
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 367 GWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
G E+F M + G+ + ++ L G + + + M +D PD + + LL
Sbjct: 344 GTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 159/386 (41%), Gaps = 56/386 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPTP----NVFLWTSIIHA---HSHSD 99
+RG P+ + + G + + L N+ +V ++ +II + + H D
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAIHCHVIKFAVASAPYVSTGLV 155
AL+ + M + + PN T+SS++ C+ A + +I+ + L+
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 156 GAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGM------ 205
A+ + G AEK+ D+M +RS+ + +++ + H RL +A+ +FE M
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 206 ---------------------------EADSR----DVVCWNVMIDEYAQNGMPNECLLL 234
E R D V + +I +G + +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCK 294
F++M+++ V PD +T +L G LE + Y+ + +++ + T +++ CK
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 295 CGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVT 350
G +DD +F ++ V +VV +N+MI G +EA L +M G P T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 351 FVAVLTACGHSGLVSKGWEIFNLMKN 376
+ ++ A G + E+ M++
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRS 528
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 149/365 (40%), Gaps = 59/365 (16%)
Query: 178 SLVSVTAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQNGMPNECLLLF 235
S+ +L+ AK + L E M+ S ++ +N++I+ + + + L L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
KM+ P +TL ++L++ YC
Sbjct: 69 GKMMKLGYEPSIVTL-----------------------------------SSLLNGYCHG 93
Query: 296 GSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
+ DA + D +V+ D + + ++I G +H + EA+ L D M G +P+ VT+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
V+ G + + + N M+ +E + F +++ L + +++ +L + M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 412 TD---PDSVLWGTLLWAC-----RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAAS 463
T P+ V + +L+ +C R L ++ E ++ NL T+ L + +
Sbjct: 213 TKGIRPNVVTYSSLI-SCLCSYGRWSDASQLLSDMIEKKINPNLV---TFNALIDAFVKE 268
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFIAGDLRHPKSQDIYLMLEEMNCRL 523
G +V A K+ M ++ + I N+ I+ F D R K++ ++ + +C
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPD----IFTYNSLINGFCMHD-RLDKAKQMFEFMVSKDCFP 323
Query: 524 KANGY 528
+ Y
Sbjct: 324 DLDTY 328
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 221/511 (43%), Gaps = 63/511 (12%)
Query: 61 QRSYSSV-------GHLHHSVTLFNRTPTP----NVFLWTSIIHAHSHSDQ---ALSFYA 106
Q +Y+SV G++ ++ L + + NV TS+I H ++ AL +
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFD 363
Query: 107 RMLAQPVEPNAFTFSSVLH----GCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGG 162
+M + PN+ TFS ++ ++ A + + + + + ++ + +G
Sbjct: 364 KMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQ 423
Query: 163 DVFSAEKVFDEMSERSLVSV---TAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWN- 216
A K+FDE E L +V +L+ K G+ EA L ME+ +VV +N
Sbjct: 424 KHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 217 VMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSC----GQLGALESGRWIHSY 272
VM+ Q M + ++F +L + ++P+ T ++ C + ALE
Sbjct: 484 VMLGHCRQKNM-DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE-------- 534
Query: 273 VGNHKNGVEVRVG----TALVDMYCKCGSLDDARKIFDNIVDR-----DVVAWNSMIMGY 323
V NH + V +++ CK G AR++ N+++ +++NS+I G+
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPK 383
G + A+ ++EMCG G+ P+ +T+ +++ + + + E+ + MKN G++
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK-GVKLD 653
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEIAE 440
I +G +++ + +E L + +P ++ +L+ R N+ ++ +
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 441 FILSHNLASS-GTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEF 499
+L L GTY L + GN + A+++ + M+ G+ + + VN
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN------ 767
Query: 500 IAGDLRHPKSQDIYLMLEEMNCRLKANGYTP 530
G + + + M EEM K N TP
Sbjct: 768 --GLSKKGQFVKVVKMFEEM----KKNNVTP 792
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 61/326 (18%)
Query: 83 PNVFLWTSIIHA--HSHSDQ-ALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAI 135
PN + ++ +I +H +Q AL M + +E N + ++++G C + AR +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 136 HCHVI---KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS----ERSLVSVTAMLTC 188
++I + V+ Y S ++ + + G++ SA ++EM ++++ T+++
Sbjct: 571 LANMIEEKRLCVSCMSYNS--IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 189 YAKHGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
K+ R+ +A + + M+ D+ + +ID + + LF ++L E + P
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT--ALVDMYCKCGSLDDARKI 304
+ +++S LG + + + Y K+G+ +GT L+D K G+L A ++
Sbjct: 689 QPIYNSLISGFRNLGNMVAA--LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 305 F---------------------------------------DNIVDRDVVAWNSMIMGYAI 325
+ N V +V+ +N++I G+
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 326 HGYSEEALRLFDEMCGMGVKPSDVTF 351
G +EA RL DEM G+ P TF
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 12/264 (4%)
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSLVS----VTAMLTCYAKHGRLREARLLFEGMEAD- 208
L+ AY++ A + ++M E ++ V L+ + L EA+ L+ M A
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228
Query: 209 -SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL-LAVLSSCGQLGALESG 266
D V +++ + P E L + + + PD + LAV + C L +
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMAN 288
Query: 267 RWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMG 322
+ T+++ K G++DDA ++ D + + +VVA S+I G
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348
Query: 323 YAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
+ + AL LFD+M G P+ VTF ++ +G + K E + M+ G+ P
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME-VLGLTP 407
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDL 406
+ H ++ + + EE L
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKL 431
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 163/352 (46%), Gaps = 23/352 (6%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHAHSHS---D 99
+ G +P + L + + +V+L ++ P++ + +II + + +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNL----QAARAIHCHVIKFAVASAPYVSTGL 154
A F+ + + + PN T++++++G CN AAR + +IK + + L
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS-DMIKKKITPNVITYSAL 266
Query: 155 VGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADS- 209
+ A+ + G V A+++F+EM S+ V+ ++++ H R+ EA +F+ M +
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 210 -RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
DVV +N +I+ + + + + LFR+M + + +T ++ Q G ++ +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYA 324
S + ++ L+ C G L+ A IF+++ +D D+V + ++I G
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 325 IHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKN 376
G EEA LF + G+KP VT+ +++ GL+ + ++ MK
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 173/380 (45%), Gaps = 27/380 (7%)
Query: 69 HLHHSVTLFNRT----PTPNVF----LWTSIIHAHSHSDQALSFYARMLAQPVEPNAFTF 120
L+ ++ LF+ P P++ L ++I+ + D +S +M + + +TF
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY-DVVISLGKKMEVLGIRNDLYTF 123
Query: 121 SSVLHG--CNLQAARAIHC--HVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE 176
+ V++ C Q + A+ ++K LV + R V A + D+M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 177 ----RSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNE 230
+V+ A++ K R+ +A F+ +E +VV + +++ + ++
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 231 CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVD 290
L M+ +K+ P+ IT A+L + + G + + + + ++ ++L++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 291 MYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
C +D+A ++FD +V + DVV++N++I G+ E+ ++LF EM G+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 347 SDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDL 406
+ VT+ ++ +G V K E F+ M + +G+ P I + ++ L G LE+ +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 407 VRGMKT---DPDSVLWGTLL 423
M+ D D V + T++
Sbjct: 423 FEDMQKREMDLDIVTYTTVI 442
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 287 ALVDMYCKCGSLDDARKIFDNIVD----RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
+LV+ +C+ + DA + D +V+ D+VA+N++I +A F E+
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
G++P+ VT+ A++ +S S + + M + P + + +++ + G++ E
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLE 278
Query: 403 GYDLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHN-LASSGTYVLLSN 458
+L M DPD V + +L+ LH + ++ + ++S LA +Y L N
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 459 IYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEFI-AGDLRHPKSQDIYLMLE 517
+ + K+ M G+ + + N I F AGD+ K+Q+ + ++
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVS----NTVTYNTLIQGFFQAGDV--DKAQEFFSQMD 392
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 151/332 (45%), Gaps = 22/332 (6%)
Query: 63 SYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHS----DQALSFYARMLAQPVE 114
+Y G ++++FN PN+ + ++I A Q F+ M V+
Sbjct: 277 AYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQ 336
Query: 115 PNAFTFSSVLHGCN----LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
P+ TF+S+L C+ +AAR + + + + L+ A +GG + A ++
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 171 FDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQ 224
+M + ++VS + ++ +AK GR EA LF M + D V +N ++ Y +
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 225 NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRV 284
G E L + R+M + ++ D +T A+L G+ G + + + + + +
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 285 GTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMC 340
+ L+D Y K G +A +IF + DVV ++++I +G A+ L DEM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 341 GMGVKPSDVTFVAVLTACGHSGLVSKGWEIFN 372
G+ P+ VT+ +++ A G S + + + N
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 151/324 (46%), Gaps = 19/324 (5%)
Query: 149 YVSTGLVGAYARGGDVFSAEKVFDEMSE----RSLVSVTAMLTCYAKHG-RLREARLLFE 203
Y + L+ AY R G A VF+ M E +LV+ A++ K G ++ F+
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 204 GMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLG 261
M+ + D + +N ++ ++ G+ LF +M ++ D + +L + + G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 262 ALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWN 317
++ I + + + V + ++D + K G D+A +F + + D V++N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 318 SMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG 377
+++ Y G SEEAL + EM +G+K VT+ A+L G G + ++F MK
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 378 YGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLLWA-CR---LHK 430
+ + P + + +++ + G +E ++ R K+ D VL+ L+ A C+ +
Sbjct: 509 HVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 431 NVSLGEEIAEFILSHNLASSGTYV 454
VSL +E+ + +S N+ + + +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSII 591
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 145/315 (46%), Gaps = 14/315 (4%)
Query: 182 VTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
+AM++ ++G++ A+ +FE A V ++ +I Y ++G+ E + +F M
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV-RVGTALVDMYCKCGSL 298
+RP+ +T AV+ +CG+ G +E + + +NGV+ R+ + C G L
Sbjct: 296 EYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 299 -DDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVA 353
+ AR +FD + +R DV ++N+++ G + A + +M + P+ V++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 354 VLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT- 412
V+ +G + +F M+ G+ + ++++ + GR EE D++R M +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 413 --DPDSVLWGTLLWAC-RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGA 469
D V + LL + K + + E H L + TY L + Y+ G + A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 470 AKVRSLMKGSGVEKE 484
++ K +G+ +
Sbjct: 534 MEIFREFKSAGLRAD 548
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIV----DRDVVAWNSMIMGYAIHGYSEEALRLFDE 338
++ +A++ + G + A++IF+ V A++++I Y G EEA+ +F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKG-WEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
M G++P+ VT+ AV+ ACG G+ K + F+ M+ G++P F ++ + R
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRG 352
Query: 398 GRLEEGYDLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEI-AEFILSHNLASSGTY 453
G E +L M + + D + TLL A + L EI A+ + + + +Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 454 VLLSNIYAASGNWVGAAKVRSLMKGSGV 481
+ + +A +G + A + M+ G+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 185/431 (42%), Gaps = 35/431 (8%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCN----LQAARAI 135
PNV ++T++I +S A+ M Q + P+ F ++S++ G + + AR+
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+++ + + + Y + SA+K EM E + V T ++ Y K
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 192 HGRLREA-----RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPD 246
G++ EA ++ +G+ D++ + V+++ +N ++ +FR+M + + PD
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAK---TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 247 EITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD 306
+ +++ +LG ++ I + V + L+ +C+ G ++ A+++ D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 307 NIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSG 362
+ + + V + ++I GY G EA RLFDEM G+ P + ++ C
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 363 LVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT-------DPD 415
V + IF N G F ++N + + G+ E +++ + P+
Sbjct: 747 DVERAITIFG--TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 416 SVLWGTLL-WACRLHKNVSLGEEIAEFILSHNLASSG-TYVLLSNIYAASGNWVGAAKVR 473
V + ++ + C+ N+ +E+ + + NL + TY L N Y G V
Sbjct: 805 DVTYNIMIDYLCK-EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 474 SLMKGSGVEKE 484
+G+E +
Sbjct: 864 DEAIAAGIEPD 874
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 173/390 (44%), Gaps = 28/390 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHA---HSHSD 99
+RG P + + G + +++L + +V ++ +II + H D
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNL---QAARAIHCHVIKFAVASAPYVSTGLV 155
AL+ + M + + P+ FT+SS++ CN A + +I+ + + L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 156 GAYARGGDVFSAEKVFDEMSERS----LVSVTAMLTCYAKHGRLREARLLFEGMEADS-- 209
A+ + G + AEK++DEM +RS + + ++++ + H RL EA+ +FE M +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
+VV ++ +I + + E + LFR+M + + +T ++ Q ++ + +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 270 HSY---VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFD----NIVDRDVVAWNSMIMG 322
VG H N + + L+D CK G L A +F+ + ++ D+ +N MI G
Sbjct: 456 FKQMVSVGVHPNILTYNI---LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 323 YAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
G E+ LF + GV P+ + + +++ G + + MK G P
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPLP 571
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMKT 412
+ ++ R G E +L++ M++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 17/308 (5%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHG-CN---LQAARAIH 136
+++ ++ I+ Q AL+ A+M+ EP+ T SS+L+G C+ + A A+
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKH 192
+++ + T L+ A + D+M +R LV+ ++ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G + A L + ME DVV +N +ID + ++ L LF +M + +RPD T
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 251 LAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVD 310
+++S G + S + K V +AL+D + K G L +A K++D ++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 311 R----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSK 366
R D+ ++S+I G+ +H +EA +F+ M P+ VT+ ++ + V +
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 367 GWEIFNLM 374
G E+F M
Sbjct: 417 GMELFREM 424
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 25/431 (5%)
Query: 99 DQALSFYARMLAQPVEPNAFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGL 154
D+ Y ML V PN +T++ +++G C N++ A +++ + + T L
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 155 VGAYARGGDVFSAEKVFDEMS----ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS- 209
+ Y + D+ SA KVF+EM R+ V+ T ++ R+ EA LF M+ D
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 210 -RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRW 268
V + V+I + +E L L ++M ++P+ T ++ S E R
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 269 IHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYA 324
+ + V AL++ YCK G ++DA + + + R + +N +I GY
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 325 IHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKI 384
+A+ + ++M V P VT+ +++ SG + + +LM N G+ P
Sbjct: 440 -KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM-NDRGLVPDQ 497
Query: 385 EHFGCMVNLLGRAGRLEEGYDLVRGMK---TDPDSVLWGTLLWA-CRLHKNVSLGEEIAE 440
+ M++ L ++ R+EE DL ++ +P+ V++ L+ C+ K V + E
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK-VDEAHLMLE 556
Query: 441 FILSHN-LASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEF 499
+LS N L +S T+ L + A G A + M G++ I ++ + +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD- 615
Query: 500 IAGDLRHPKSQ 510
GD H S+
Sbjct: 616 --GDFDHAYSR 624
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 51/324 (15%)
Query: 83 PNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHG---CNLQAARAIH 136
PNV + ++I+ + + A+ M ++ + PN T++ ++ G N+ A +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV----SVTAMLTCYAKH 192
+++ V L+ R G+ SA ++ M++R LV + T+M+ K
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 193 GRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
R+ EA LF+ +E + +VV + +ID Y + G +E L+ KML++ P+ +T
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 251 LAV---LSSCGQLGA---------------------------LESGRWIHSYVGNHK--- 277
A+ L + G+L L+ G + H+Y +
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 278 --NGVEVRVGTALVDMYCKCGSLDDAR----KIFDNIVDRDVVAWNSMIMGYAIHGYSEE 331
+ T + YC+ G L DA K+ +N V D+ ++S+I GY G +
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 332 ALRLFDEMCGMGVKPSDVTFVAVL 355
A + M G +PS TF++++
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 45/311 (14%)
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
C+N +++ A+ G+ +E ++ +ML +KV P+ T +++ +LG +E S +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYS 329
+ T+L+ YC+ LD A K+F+ + R+ VA+ +I G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 330 EEALRLFDEM-------------------CG----------------MGVKPSDVTFVAV 354
+EA+ LF +M CG G+KP+ T+ +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 355 LTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---K 411
+ + K E+ M G+ P + + ++N + G +E+ D+V M K
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 412 TDPDSVLWGTLLWA-CRLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAA 470
P++ + L+ C+ + + ++G + + + L TY L + SGN+ A
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 471 KVRSLMKGSGV 481
++ SLM G+
Sbjct: 483 RLLSLMNDRGL 493
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 200/470 (42%), Gaps = 34/470 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRT----PTPNVFLWTSIIHAHSHSDQ-- 100
+RG++P I L Y G L LF++ +V +++S I + S
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 101 -ALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
A Y RML Q + PN T++ ++ G + A ++ ++K + + + L+
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 156 GAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGMEADS-- 209
+ + G++ S ++++M + +V ++ +K G + A M S
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL-------SSCGQLGA 262
+VV +N +ID + + +E L +FR M ++PD T V+ + C +
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 263 LESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV----DRDVVAWNS 318
G + + +K ++ V ++ + KC ++DA K F+N++ + D+V +N+
Sbjct: 554 -TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 319 MIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGY 378
MI GY +EA R+F+ + P+ VT ++ + + +F++M
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK- 671
Query: 379 GMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---TDPDSVLWGTLL-WACRLHKNVSL 434
G +P +GC+++ ++ +E + L M+ P V + ++ C+ +
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 435 GEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKE 484
+ I + L Y +L Y G V AA + M +GV+ +
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 185/421 (43%), Gaps = 51/421 (12%)
Query: 81 PTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHC 137
P PNV + ++I+ D+A + M + +EP+ +S+++ G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG----------- 330
Query: 138 HVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLRE 197
Y G++G G +FS + + + +V ++ + Y K G L
Sbjct: 331 -----------YFKAGMLGM---GHKLFS--QALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 198 ARLLFEGM--EADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLS 255
A ++++ M + S +VV + ++I Q+G E ++ ++L + P +T +++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 256 SCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR----KIFDNIVDR 311
+ G L SG ++ + +V + LVD K G + A K+ +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 312 DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA-------CGHSGLV 364
+VV +NS+I G+ +EAL++F M G+KP TF V+ C H
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-P 553
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY----DLVRGMKTDPDSVLWG 420
+ G ++F+LM+ + I +++LL + R+E+ +L+ G K +PD V +
Sbjct: 554 TIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVTYN 611
Query: 421 TLLWACRLHKNVSLGEEIAEFI-LSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGS 479
T++ + + E I E + ++ ++ T +L ++ + + GA ++ S+M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 480 G 480
G
Sbjct: 672 G 672
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 155/392 (39%), Gaps = 38/392 (9%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHSD--- 99
+RG++P + L + G+L L+ P+V ++ ++ S
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYA 159
A+ F +ML Q + N F+S++ G C + +F A + L+G Y
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDG---------WCRLNRFDEALKVF---RLMGIYG 526
Query: 160 RGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNV 217
DV + V + V+ M + KH + LF+ M+ + S D+ NV
Sbjct: 527 IKPDVATFTTV---------MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 218 MIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHK 277
+I + + F ++ K+ PD +T ++ L L+ I +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 278 NGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEAL 333
G T L+ + CK +D A ++F + ++ + V + ++ ++ E +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 334 RLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNL 393
+LF+EM G+ PS V++ ++ G V + IF+ + + P + + ++
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRG 756
Query: 394 LGRAGRLEEGYDLVRGM---KTDPDSVLWGTL 422
+ GRL E L M PD +L L
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 144/348 (41%), Gaps = 27/348 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHH----SVTLFNRTPTPNVFLWTSIIHA---HSHSD 99
+ G P ++ L S G + H SV + ++ NV ++ S+I + D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCH----------VIKFAVASAPY 149
+AL + M ++P+ TF++V+ ++ A H + + +++
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA 573
Query: 150 VSTGLVGAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAKHGRLREARLLFEGM 205
V ++ + + A K F+ + E +V+ M+ Y RL EA +FE +
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 206 EADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGAL 263
+ + V ++I +N + + +F M + +P+ +T ++ + +
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 264 ESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSM 319
E + + + + ++D CK G +D+A IF +D DVVA+ +
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 320 IMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
I GY G EA L++ M GVKP D+ A+ L+SKG
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKG 801
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 83 PNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHGC--NLQAARAIHC 137
P++ + ++I + D+A + + P PN T + ++H N AI
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 138 HVIKFAVASAPYVST--GLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
I S P T L+ +++ D+ + K+F+EM E+ S+VS + ++ K
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 192 HGRLREARLLF-EGMEADS-RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
GR+ EA +F + ++A DVV + ++I Y + G E LL+ ML V+PD++
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Query: 250 LLAVLSSCGQLGALESGRWIH 270
A+ + G W+H
Sbjct: 785 QRALSEYNPPKWLMSKGVWVH 805
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 192/427 (44%), Gaps = 34/427 (7%)
Query: 81 PTPNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAAR 133
P PNV + ++I+ D+A + M + +EP+ +S+++ G L
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 134 AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCY 189
+ + V V + + Y + GD+ +A V+ M ++V+ T ++
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 190 AKHGRLREA-----RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVR 244
+ GR+ EA ++L GME +V ++ +ID + + G L+ M+
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEP---SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 245 PDEITLLAVLSSCGQLG-ALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
PD + ++ + G L + R+ +G + V V +L+D +C+ D+A K
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR-LNVVVFNSLIDGWCRLNRFDEALK 517
Query: 304 IFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA-C 358
+F + + DV + +++ + G EEAL LF M MG++P + + ++ A C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 359 GHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGY----DLVRGMKTDP 414
H + G ++F+LM+ + I +++LL + R+E+ +L+ G K +P
Sbjct: 578 KHMK-PTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-KMEP 634
Query: 415 DSVLWGTLLWACRLHKNVSLGEEIAEFI-LSHNLASSGTYVLLSNIYAASGNWVGAAKVR 473
D V + T++ + + E I E + ++ ++ T +L ++ + + GA ++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 474 SLMKGSG 480
S+M G
Sbjct: 695 SIMAEKG 701
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 189/446 (42%), Gaps = 26/446 (5%)
Query: 64 YSSVGHLHHSVTLFNRT----PTPNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPN 116
Y G L + ++ R +PNV +T +I +A Y ++L + +EP+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 117 AFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
T+SS++ G NL++ A++ +IK + LV ++ G + A +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 173 EMSERSL----VSVTAMLTCYAKHGRLREARLLFE--GMEADSRDVVCWNVMIDEYAQNG 226
+M +S+ V +++ + + R EA +F G+ DV + ++ G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT 286
E L LF +M + PD + ++ + + G + + +K ++ V
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 287 ALVDMYCKCGSLDDARKIFDNIVD----RDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
++ + KC ++DA K F+N+++ D+V +N+MI GY +EA R+F+ +
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEE 402
P+ VT ++ + + +F++M G +P +GC+++ ++ +E
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 403 GYDLVRGMK---TDPDSVLWGTLL-WACRLHKNVSLGEEIAEFILSHNLASSGTYVLLSN 458
+ L M+ P V + ++ C+ + + I + L Y +L
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 459 IYAASGNWVGAAKVRSLMKGSGVEKE 484
Y G V AA + M +GV+ +
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 17/302 (5%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P+V +T+++ ++AL + RM +EP+A + +++ I +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 140 IKF----AVASAPYVSTGLVGAYARGGDVFSAEKVFDEM----SERSLVSVTAMLTCYAK 191
+++ V ++ + + A K F+ + E +V+ M+ Y
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 192 HGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
RL EA +FE ++ + V ++I +N + + +F M + +P+ +T
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
++ + +E + + + + ++D CK G +D+A IF +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 310 DR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
D DVVA+ +I GY G EA L++ M GVKP D+ A+ L+S
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMS 828
Query: 366 KG 367
KG
Sbjct: 829 KG 830
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 83 PNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHGC--NLQAARAIHC 137
P++ + ++I + D+A + + P PN T + ++H N AI
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 138 HVIKFAVASAPYVST--GLVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAK 191
I S P T L+ +++ D+ + K+F+EM E+ S+VS + ++ K
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 192 HGRLREARLLF-EGMEADS-RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
GR+ EA +F + ++A DVV + ++I Y + G E LL+ ML V+PD++
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 250 LLAVLSSCGQLGALESGRWIH 270
A+ + G W+H
Sbjct: 814 QRALSEYNPPKWLMSKGVWVH 834
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 145/328 (44%), Gaps = 16/328 (4%)
Query: 99 DQALSFYARMLAQP-VEPNAFTFSSVLHG-CNL-QAARAIHCHVIKFAVASAP--YVSTG 153
+ AL+F M Q P+ +TF+++++G C AI + P Y
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 154 LVGAYARGGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGMEADS 209
++ + G+V A +V D+M R + V+ +++ K ++ EA L + +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 210 --RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR 267
DV +N +I + LF +M ++ PDE T ++ S G L+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 268 WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGY 323
+ + V L+D +CK +A +IFD + V R+ V +N++I G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPK 383
E+A +L D+M G KP T+ ++LT G + K +I M + G EP
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPD 574
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
I +G +++ L +AGR+E L+R ++
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 155/358 (43%), Gaps = 28/358 (7%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFN----RTPTPNVFLWTSIIHAHSHSDQA- 101
+ G DP + +G + +V + + R +PN + ++I +Q
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 102 -LSFYARML-AQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLV 155
+ AR+L ++ + P+ TF+S++ G N + A + + + L+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 156 GAYARGGDVFSAEKVFDEMS----ERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD--S 209
+ G + A + +M RS+++ ++ + K + REA +F+ ME S
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 210 RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWI 269
R+ V +N +ID ++ + L +M+ E +PD+ T ++L+ + G ++ I
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 270 HSYVGNHKNGVEVRVGT--ALVDMYCKCGSLDDARKIFDNIVDRDVV----AWNSMIMGY 323
+ + NG E + T L+ CK G ++ A K+ +I + + A+N +I G
Sbjct: 563 VQAMTS--NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSD-VTFVAVLTA-CGHSGLVSKGWE-IFNLMKNGY 378
+ EA+ LF EM P D V++ V C G + + + + L++ G+
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 135/319 (42%), Gaps = 21/319 (6%)
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
DV +NV+I + +L+ M + + PDE T V+ + G L+ I
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 271 SYV---GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-----DVVAWNSMIMG 322
+ G + V V V +V +CK G ++DA + ++ D +N+++ G
Sbjct: 248 EQMVEFGCSWSNVSVNV---IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 323 YAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
G+ + A+ + D M G P T+ +V++ G V + E+ + M P
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT-RDCSP 363
Query: 383 KIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLHKNVSLGEEIA 439
+ +++ L + ++EE +L R + + PD + +L+ L +N + E+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 440 EFILSHNLASSG-TYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHE 498
E + S TY +L + + G A + M+ SG + S+I N I
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR----SVITYNTLIDG 479
Query: 499 FIAGDLRHPKSQDIYLMLE 517
F + + ++++I+ +E
Sbjct: 480 FCKAN-KTREAEEIFDEME 497
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 178/441 (40%), Gaps = 66/441 (14%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNR----TPTPNVFLWTSIIHA---HSHSD 99
+ G +P I L + G + +V L +R P++ +++I+
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLH--------GCNLQAARAIHCHVIKFAVASAPYVS 151
+AL RM+ +P+ T+ VL+ L R + IK +V V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV- 251
Query: 152 TGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLRE-ARLLFEGME 206
+ + + G A +F+EM + + V+ ++++ G+ + A++L E +
Sbjct: 252 ---IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 207 ADS-RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALES 265
+ DVV ++ +ID + + G E L+ +M+ + PD IT +++ + L
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 266 GRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIM 321
+ + + ++ + L++ YCK +DD ++F I + + + +N++++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 322 GYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNG---- 377
G+ G A LF EM GV PS VT+ +L +G ++K EIF M+
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 378 ------------------------------YGMEPKIEHFGCMVNLLGRAGRLEEGYDLV 407
G++P + + M+ L + G L E L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 408 RGMKTD---PDSVLWGTLLWA 425
R MK D PD + L+ A
Sbjct: 549 RKMKEDGCTPDDFTYNILIRA 569
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 166/362 (45%), Gaps = 25/362 (6%)
Query: 84 NVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLHGCNLQA----ARAIH 136
+++ T +I+ + + A S R EP+ TFS++++G L+ A A+
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 137 CHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKH 192
+++ + L+ G V A + D M E V+ +L K
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 193 GRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITL 250
G A LF ME + VV ++++ID ++G ++ L LF +M + ++ D +T
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 251 LAVLSSCGQLGALESG-RWIHSYVGNHKNGV-EVRVGTALVDMYCKCGSLDDARKIFDNI 308
+++ G + G + + +G +N + +V +AL+D++ K G L +A+++++ +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIG--RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 309 VDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
+ R D + +NS+I G+ EA ++FD M G +P VT+ ++ + + V
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGT 421
G +F + + G+ P + +V ++G+L +L + M + P V +G
Sbjct: 402 DDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 422 LL 423
LL
Sbjct: 461 LL 462
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 22/320 (6%)
Query: 68 GHLHHSVTLFNRTP----TPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTF 120
G +++LFN +V ++S+I + D M+ + + P+ TF
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 121 SSVL----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM-- 174
S+++ L A+ ++ +I +A L+ + + + A ++FD M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 175 --SERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNE 230
E +V+ + ++ Y K R+ + LF + + + + +N ++ + Q+G N
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 231 CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVD 290
LF++M++ V P +T +L G L I + + + + + ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 291 MYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKP 346
C +DDA +F ++ D+ DVV +N MI G G EA LF +M G P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 347 SDVTFVAVLTA-CGHSGLVS 365
D T+ ++ A G SGL+S
Sbjct: 559 DDFTYNILIRAHLGGSGLIS 578
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 125/254 (49%), Gaps = 11/254 (4%)
Query: 183 TAMLTCYAKHGRLREARLLFEGME--ADSRDVVCWNVMIDEYAQNGMP-NECLLLFRKML 239
T +L Y++ G+ +A LFE M+ S +V +NV++D + + G + L + +M
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
++ ++ DE T VLS+C + G L + + + + AL+ ++ K G
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 300 DA----RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
+A +++ +N D V +N ++ Y G+S+EA + + M GV P+ +T+ V+
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD-- 413
A G +G + ++F MK G P + +++LLG+ R E ++ MK++
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 414 -PDSVLWGTLLWAC 426
P+ W T+L C
Sbjct: 453 SPNRATWNTMLALC 466
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 151/364 (41%), Gaps = 27/364 (7%)
Query: 73 SVTLFNRTPTPNVFL----WTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLH 125
+ L ++ P L +T+I+HA+S + ++A+ + RM P T++ +L
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 126 -----GCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS----E 176
G + + + + + + + ++ A AR G + A++ F E+ E
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 177 RSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLL 234
V+ A+L + K G EA + + ME +S D V +N ++ Y + G E +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 235 FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT--ALVDMY 292
M + V P+ IT V+ + G+ G + + + + G T A++ +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA--LKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 293 CKCGSLDDARKIF----DNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
K ++ K+ N + WN+M+ G + R+F EM G +P
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVR 408
TF +++A G G +++ M G + + ++N L R G G +++
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 409 GMKT 412
MK+
Sbjct: 551 DMKS 554
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 152/360 (42%), Gaps = 37/360 (10%)
Query: 82 TPNVFLWTSIIH--AHSHSDQALS-FYARMLAQPVEPNAFTFSSVLH-----GCNLQAAR 133
+PN W +++ + D+ ++ + M + EP+ TF++++ G + A++
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 134 AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCY 189
++ + + + L+ A AR GD S E V +M + S + ML CY
Sbjct: 513 -MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY 571
Query: 190 AKHG----------RLREARLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
AK G R++E ++ M R ++ N A + LF+K
Sbjct: 572 AKGGNYLGIERIENRIKEGQIFPSWMLL--RTLLLANFKCRALAGS---ERAFTLFKK-- 624
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+PD + ++LS + + I + ++ +L+DMY + G
Sbjct: 625 -HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 300 DARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
A +I + + D+V++N++I G+ G +EA+R+ EM G++P T+ +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKT-DP 414
+ G+ ++ ++ M P F +V+ RAG+ E D V +KT DP
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 146/340 (42%), Gaps = 34/340 (10%)
Query: 62 RSYSSVGHLHHSVTLFNRTPTP---NVF--LWTSIIHAHSHSDQALSFYARMLAQPVEPN 116
+ + + G L H+ F R P +V+ L+TS+ + +A RM VEP
Sbjct: 540 KGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 117 AFTFSSVLHG-C---NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFD 172
+ ++ C N++ AR ++ + + T ++ Y R + A +F+
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 173 EMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNG 226
+M R + V+ + +L + RE MEA DVV + +MI+ Y
Sbjct: 660 DMKRRDVKPDVVTYSVLLNSDPELDMKRE-------MEAFDVIPDVVYYTIMINRYCHLN 712
Query: 227 MPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGT 286
+ LF+ M ++ PD +T +L + + R + + +V T
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYT 765
Query: 287 ALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGM 342
L+D CK G L +A++IFD + VD D + ++I GY +EA +FD M
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 343 GVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEP 382
GVKP V + A++ C +G V K ++ M G++P
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK-GIKP 864
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 140/333 (42%), Gaps = 60/333 (18%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLF----NRTPTPNVFLWTSIIHAH---SHSDQA 101
G++P + KL ++ V ++ + F + P++F +T +I+ + + QA
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHG-CNLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
+ + M + V+P+ T+S +L+ L R + F V T ++ Y
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEA----FDVIPDVVYYTIMINRYCH 710
Query: 161 GGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEA-DSR-DVVCWNVM 218
D+ +F +M R +V T K+ + R L M+A D + DV + V+
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKN---KPERNLSREMKAFDVKPDVFYYTVL 767
Query: 219 IDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKN 278
ID + G E +F +M+ V PD A+++ C
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC--------------------- 806
Query: 279 GVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALR 334
CK G L +A+ IFD +++ DVV + ++I G +G+ +A++
Sbjct: 807 --------------CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVK 852
Query: 335 LFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKG 367
L EM G+KP+ A L+A ++ L +KG
Sbjct: 853 LVKEMLEKGIKPTK----ASLSAVHYAKLKAKG 881
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 147/378 (38%), Gaps = 85/378 (22%)
Query: 129 LQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER----SLVSVTA 184
++ A ++ + K + YV + ++ + + ++ A VF++M ++ + V V++
Sbjct: 307 IEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS 366
Query: 185 MLTCYAKHGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK 242
+L CY + G EA LF+ S D VC+NV D + G E + LFR+M +
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 243 VRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDAR 302
+ PD I ++ C C G DA
Sbjct: 427 IAPDVINYTTLIGGC-----------------------------------CLQGKCSDA- 450
Query: 303 KIFDNIVDR-------DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
FD +++ D+V +N + G A +G ++EA M GVKP+ VT V+
Sbjct: 451 --FDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI 508
Query: 356 TACGHSGLVSKGWEIFNLM-----KNGYGME-----------------------PKIEHF 387
+G + K + + +N M PK +F
Sbjct: 509 EGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYF 568
Query: 388 GCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGTLLWA-CRLHKNVSLGEEIAEFIL 443
+L + + DL+ M +P+ ++G L+ A CR++ NV E E ++
Sbjct: 569 TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVN-NVRKAREFFEILV 627
Query: 444 SHNLASS-GTYVLLSNIY 460
+ + TY ++ N Y
Sbjct: 628 TKKIVPDLFTYTIMINTY 645
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 178/389 (45%), Gaps = 30/389 (7%)
Query: 69 HLHHSVTLFNRT----PTPNVFLWT---SIIHAHSHSDQALSFYARMLAQPVEPNAFTFS 121
+ ++ LF R P P++ +T S+I + D +S + +M + P T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 122 SVLHGCNL--QAARAIHCHV---IKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM-- 174
V+H L Q RA C + +K T L+ Y + A +FD++
Sbjct: 123 IVMHCVCLSSQPCRA-SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 175 --SERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD-SR-DVVCWNVMIDEYAQNGMPNE 230
+ ++V+ T ++ C K+ L A LF M + SR +VV +N ++ + G +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 231 CLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVD 290
L R M+ ++ P+ IT A++ + ++G L + +++ + +V +L++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 291 MYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS-----EEALRLFDEMCGMGVK 345
C G LD+AR++F +++R+ N +I IHG+ E+ +++F EM GV
Sbjct: 302 GLCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 346 PSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG-- 403
+ +T+ ++ G E+FN M + P I + +++ L G++E+
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 404 -YDLVRGMKTDPDSVLWGTLLWA-CRLHK 430
++ +R + D + V + ++ C+L K
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 160/359 (44%), Gaps = 39/359 (10%)
Query: 47 RRGLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHA---HSHSD 99
+ G +P + L Y + ++ LF++ PNV +T++I + H +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 100 QALSFYARMLAQPVEPNAFTFSSVLHG-CNL------------QAARAIHCHVIKFAVAS 146
A+ + +M PN T+++++ G C + R I +VI F
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF---- 261
Query: 147 APYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLF 202
T L+ A+ + G + A+++++ M + S+ + +++ +G L EAR +F
Sbjct: 262 -----TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 203 EGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQL 260
ME + + V + +I + ++ + + +F +M + V + IT ++ +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 261 GALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAW 316
G + + + + + + + ++R L+D C G ++ A IF+ + +D ++V +
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 317 NSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMK 375
+I G G E+A LF + G+KP+ +T+ +++ GL+ + +F MK
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 21/324 (6%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTPT----PNVFLWTSIIHAHSHSDQ---A 101
G P+ + L R HL+H+V LFN+ T PNV + +++ + A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 102 LSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGA 157
M+ + +EPN TF++++ L A+ ++ +I+ +V + L+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 158 YARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADS--RD 211
G + A ++F M V T ++ + K R+ + +F M +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 212 VVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHS 271
+ + V+I Y G P+ +F +M + + PD T +L G +E I
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 272 YVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHG 327
Y+ + + + T ++ CK G ++DA +F ++ + +V+ + +MI G+ G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 328 YSEEALRLFDEMCGMGVKPSDVTF 351
EA LF +M G P++ +
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 187/404 (46%), Gaps = 33/404 (8%)
Query: 83 PNVFLWTSIIHA---HSHSDQALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P+ +T+++H H+ + +A++ RM+ + +P+ T+ +V++G + + ++
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 140 I----KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+ K + + + ++ + + A +F++M + + + +++C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 192 HGRLREA-RLLFEGMEAD-SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEK-VRPDEI 248
+GR +A RLL + +E + + D+V +N +ID + + G E L+ +M+ K PD +
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
++ + +E G + + T L+ + + D+A+ +F +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 309 VDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
V D++ +N ++ G +G E AL +F+ M +K VT+ ++ A +G V
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGT 421
GW++F + + G++P + + M++ R G EE L MK D P+S + T
Sbjct: 478 EDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSG------TYVLLSNI 459
L+ A RL G+E A L + S G T+ L++N+
Sbjct: 537 LIRA-RLRD----GDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 189/467 (40%), Gaps = 82/467 (17%)
Query: 83 PNVFLWTSIIHAHSHSD---QALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHV 139
P++ S+++ H + +A++ +M+ +P+ TF++++HG Q +A
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL-FQHNKASE--- 198
Query: 140 IKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLVSVTAMLTCYAKHGRLREAR 199
AVA E++ + + LV+ A++ K G A
Sbjct: 199 ---AVA--------------------LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 200 LLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSC 257
L ME DVV +N +ID + ++ LF KM + ++PD T ++S
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 258 GQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR-----D 312
G + S + ++ AL+D + K G L +A K++D +V D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 313 VVAWNSMIMGYA------------------------------IHGY-----SEEALRLFD 337
VVA+N++I G+ IHG+ + A +F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 338 EMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRA 397
+M GV P +T+ +L ++G V +F M+ M+ I + M+ L +A
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK-RDMKLDIVTYTTMIEALCKA 474
Query: 398 GRLEEGYDL-----VRGMKTDPDSVLWGTLLWA-CRLHKNVSLGEEIAEFILSHNLASSG 451
G++E+G+DL ++G+K P+ V + T++ CR E L +SG
Sbjct: 475 GKVEDGWDLFCSLSLKGVK--PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 452 TYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHE 498
TY L G+ +A++ M+ G + + V N +H+
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS-TFGLVTNMLHD 578
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 27/359 (7%)
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV----SVTAMLT 187
AR + + K++ L+ A+ R G A + D+M ++ + ++
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 188 CYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRP 245
G REA + + M + D+V N+++ Y ++ L F M KVRP
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR----VGTALVDMYCKCGSLDDA 301
D T ++ +LG +S + + + + E R T+++ +Y G +++
Sbjct: 282 DTTTFNIIIYCLSKLG--QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 339
Query: 302 RKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
R +F+ +V ++V++N+++ YA+HG S AL + ++ G+ P V++ +L +
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---P 414
G S K E+F +M+ +P + + +++ G G L E ++ R M+ D P
Sbjct: 400 YGRSRQPGKAKEVFLMMRKER-RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 415 DSVLWGTLLWAC-RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
+ V TLL AC R K V++ + +LS S G + + +A G+++ AA++
Sbjct: 459 NVVSVCTLLAACSRSKKKVNV-----DTVLSA-AQSRGINLNTAAYNSAIGSYINAAEL 511
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 196/487 (40%), Gaps = 77/487 (15%)
Query: 65 SSVGHLHHSVTLFNRTPT------PNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEP 115
S +G ++ LFN P+V +TSI+H +S + + + M+A+ ++P
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 116 NAFTFSSVL-----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
N ++++++ HG + A ++ + + + T L+ +Y R A++V
Sbjct: 354 NIVSYNALMGAYAVHGMS-GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 171 F----DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD------------------ 208
F E + ++V+ A++ Y +G L EA +F ME D
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 209 ---------------SR----DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
SR + +N I Y + + L++ M +KV+ D +T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI- 308
++S ++ + + + V ++++ Y K G + +A IF+ +
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 309 ---VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
+ DV+A+ SM+ Y +A LF EM G++P + A++ A G S
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCM-VNLLGRAGRLEE---GYDLVRGMKTDPDSVLWGT 421
+ + +LM+ E +I G + + L+E DL++ M DP
Sbjct: 653 NVFVLMDLMR-----EKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM--DPYLPSLSI 705
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSG------TYVLLSNIYAASGNWVGAAKVRSL 475
L LH G+ A L + + +SG TY +L A GNW +V
Sbjct: 706 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 765
Query: 476 MKGSGVE 482
M G+G++
Sbjct: 766 MSGAGIQ 772
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 164/400 (41%), Gaps = 58/400 (14%)
Query: 83 PNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLH-----GCNLQAARA 134
P++ ++ A+ Q ALS++ M V P+ TF+ +++ G + QA
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 135 IHCHVIKFAVASAPYVS-TGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCY 189
+ K A V+ T ++ Y+ G++ + VF+ M L VS A++ Y
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 190 AKH--------------------------------GRLRE---ARLLFEGMEADSR--DV 212
A H GR R+ A+ +F M + R +V
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 213 VCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY 272
V +N +ID Y NG E + +FR+M + ++P+ +++ +L++C + + + S
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 273 VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGY 328
+ + + + Y L+ A ++ ++ V D V + +I G
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EA+ EM + + + + +VL A G V++ IFN MK G EP + +
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYT 604
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLLWA 425
M++ + + + +L M+ +PDS+ L+ A
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 14/226 (6%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N+MI +A++ ++ LF +M +PD T A++++ G+ G RW + +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW---RWAMNLMD 202
Query: 275 NHKNGVEVRVGTALVDMYCKCGS-------LDDARKIFDNIVDRDVVAWNSMIMGYAIHG 327
+ + ++ CGS L+ +K+ DN V D+V N ++ Y
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 328 YSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYG-MEPKIEH 386
+AL F+ M G V+P TF ++ G S+ ++FN M+ P +
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLH 429
F +++L G +E + M + P+ V + L+ A +H
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 27/359 (7%)
Query: 132 ARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV----SVTAMLT 187
AR + + K++ L+ A+ R G A + D+M ++ + ++
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 188 CYAKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRP 245
G REA + + M + D+V N+++ Y ++ L F M KVRP
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 246 DEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVR----VGTALVDMYCKCGSLDDA 301
D T ++ +LG +S + + + + E R T+++ +Y G +++
Sbjct: 150 DTTTFNIIIYCLSKLG--QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 207
Query: 302 RKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTA 357
R +F+ +V ++V++N+++ YA+HG S AL + ++ G+ P V++ +L +
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 267
Query: 358 CGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---P 414
G S K E+F +M+ +P + + +++ G G L E ++ R M+ D P
Sbjct: 268 YGRSRQPGKAKEVFLMMRKER-RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 415 DSVLWGTLLWAC-RLHKNVSLGEEIAEFILSHNLASSGTYVLLSNIYAASGNWVGAAKV 472
+ V TLL AC R K V++ + +LS S G + + +A G+++ AA++
Sbjct: 327 NVVSVCTLLAACSRSKKKVNV-----DTVLSA-AQSRGINLNTAAYNSAIGSYINAAEL 379
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 196/487 (40%), Gaps = 77/487 (15%)
Query: 65 SSVGHLHHSVTLFNRTPT------PNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEP 115
S +G ++ LFN P+V +TSI+H +S + + + M+A+ ++P
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 116 NAFTFSSVL-----HGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKV 170
N ++++++ HG + A ++ + + + T L+ +Y R A++V
Sbjct: 222 NIVSYNALMGAYAVHGMS-GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 171 F----DEMSERSLVSVTAMLTCYAKHGRLREARLLFEGMEAD------------------ 208
F E + ++V+ A++ Y +G L EA +F ME D
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 209 ---------------SR----DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
SR + +N I Y + + L++ M +KV+ D +T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI- 308
++S ++ + + + V ++++ Y K G + +A IF+ +
Sbjct: 401 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 460
Query: 309 ---VDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
+ DV+A+ SM+ Y +A LF EM G++P + A++ A G S
Sbjct: 461 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCM-VNLLGRAGRLEE---GYDLVRGMKTDPDSVLWGT 421
+ + +LM+ E +I G + + L+E DL++ M DP
Sbjct: 521 NVFVLMDLMR-----EKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM--DPYLPSLSI 573
Query: 422 LLWACRLHKNVSLGEEIAEFILSHNLASSG------TYVLLSNIYAASGNWVGAAKVRSL 475
L LH G+ A L + + +SG TY +L A GNW +V
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 476 MKGSGVE 482
M G+G++
Sbjct: 634 MSGAGIQ 640
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 166/400 (41%), Gaps = 58/400 (14%)
Query: 83 PNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEPNAFTFSSVLH-----GCNLQA--- 131
P++ ++ A+ Q ALS++ M V P+ TF+ +++ G + QA
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 132 ------ARA------------IHCHVIKFAVASAPYV---------------STGLVGAY 158
RA +H + +K + + V L+GAY
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 159 ARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEADSR--DV 212
A G +A V ++ + + VS T +L Y + + +A+ +F M + R +V
Sbjct: 234 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 213 VCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSY 272
V +N +ID Y NG E + +FR+M + ++P+ +++ +L++C + + + S
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 353
Query: 273 VGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI----VDRDVVAWNSMIMGYAIHGY 328
+ + + + Y L+ A ++ ++ V D V + +I G
Sbjct: 354 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 329 SEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EA+ EM + + + + +VL A G V++ IFN MK G EP + +
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYT 472
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLLWA 425
M++ + + + +L M+ +PDS+ L+ A
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 14/226 (6%)
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+N+MI +A++ ++ LF +M +PD T A++++ G+ G RW + +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW---RWAMNLMD 70
Query: 275 NHKNGVEVRVGTALVDMYCKCGS-------LDDARKIFDNIVDRDVVAWNSMIMGYAIHG 327
+ + ++ CGS L+ +K+ DN V D+V N ++ Y
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 328 YSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYG-MEPKIEH 386
+AL F+ M G V+P TF ++ G S+ ++FN M+ P +
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWACRLH 429
F +++L G +E + M + P+ V + L+ A +H
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 193/468 (41%), Gaps = 48/468 (10%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHA---HSHSDQA 101
G +P + L G + ++ L +R P + ++++ + A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 102 LSFYARMLAQPVEPNAFTFSSVLH--------GCNLQAARAIHCHVIKFAVASAPYVSTG 153
+ RM+ +PN T+ VL ++ R + IK + G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 154 LVGAYARGGDVFSAEKVFDEMS----ERSLVSVTAMLTCYAKHGRLREARLLFEGM--EA 207
L + G + +A +F+EM + ++ T ++ + GR + L M
Sbjct: 257 L----CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 208 DSRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGR 267
+ DVV ++ +ID + + G E L ++M+ + PD +T +++ + L+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 268 WIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVA----WNSMIMGY 323
+ + + G +R L++ YCK +DD ++F + R VVA +N++I G+
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 324 AIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPK 383
G E A LF EM V+P V++ +L +G K EIF ++ ME
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELD 491
Query: 384 IEHFGCMVNLLGRAGRLEEGYDL-----VRGMKTDPDSVLWGTLLWACRLHKNVSLGEEI 438
I + +++ + A ++++ +DL ++G+K PD + ++ L K SL E
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK--PDVKTYNIMIGG--LCKKGSLSE-- 545
Query: 439 AEFILSHNLASSG------TYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
+L + G TY +L + G+ +AK+ +K G
Sbjct: 546 -ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 169/400 (42%), Gaps = 46/400 (11%)
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
A S +++ EP+ TFS++++G L+
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLE------------------------------ 155
Query: 161 GGDVFSAEKVFDEMSER----SLVSVTAMLTCYAKHGRLREARLLFEGM--EADSRDVVC 214
G V A ++ D M E +L+++ A++ +G++ +A LL + M + V
Sbjct: 156 -GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+ ++ ++G + L RKM K++ D + ++ + G+L++ + + +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSE 330
++ + T L+ +C G DD K+ +++ R DVVA++++I + G
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA L EM G+ P VT+ +++ + K + +LM + G P I F +
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNIL 393
Query: 391 VNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLLWA-CRLHKNVSLGEEIAEFILSHN 446
+N +A +++G +L R M D+V + TL+ C L K E E +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 447 LASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPG 486
+Y +L + +G A ++ ++ S +E + G
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 286 TALVDMYCKCGSLDDARKIFDNIV----DRDVVAWNSMIMGYAIHGYSEEALRLFDEMCG 341
+ +++ C+C L A I+ + D V ++++I G + G EAL L D M
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 342 MGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
MG KP+ +T A++ +G VS + + M G +P +G ++ ++ ++G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE-TGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 402 EGYDLVRGM---KTDPDSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLASSG------T 452
+L+R M K D+V + ++ L K+ SL F L + + G
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDG--LCKDGSLDN---AFNLFNEMEIKGFKADIII 284
Query: 453 YVLLSNIYAASGNWVGAAK-VRSLMK 477
Y L + +G W AK +R ++K
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIK 310
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 172/380 (45%), Gaps = 28/380 (7%)
Query: 75 TLFNRTPT-----PNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHG 126
LF RT P+V + SI+ + D A SF+ +L + P+ ++ + +++G
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 266
Query: 127 C----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL--- 179
++ A + + K V L + G + A +V +M ++ L
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 180 -VSVTAMLTCYAKHGRLREARLLFEGMEA---DSRDVVCWNVMIDEYAQNGMPNECLLLF 235
++ T +L + G + +L + M + + ++ +VM+ + G +E L LF
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+M A+ + PD + V+ +LG + W++ + + + R AL+ C+
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 296 GSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
G L +AR + D+++ D+V +N +I GYA G EEAL LF + G+ PS TF
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
+++ + +++ +I +++K YG+ P + + +++ G + +L R MK
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKL-YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 412 TD---PDSVLWGTLLWA-CR 427
+ P +V + + CR
Sbjct: 566 AEGIPPTNVTYSVIFKGLCR 585
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 172/380 (45%), Gaps = 28/380 (7%)
Query: 75 TLFNRTPT-----PNVFLWTSIIHAH---SHSDQALSFYARMLAQPVEPNAFTFSSVLHG 126
LF RT P+V + SI+ + D A SF+ +L + P+ ++ + +++G
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 266
Query: 127 C----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL--- 179
++ A + + K V L + G + A +V +M ++ L
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 180 -VSVTAMLTCYAKHGRLREARLLFEGMEA---DSRDVVCWNVMIDEYAQNGMPNECLLLF 235
++ T +L + G + +L + M + + ++ +VM+ + G +E L LF
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 236 RKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKC 295
+M A+ + PD + V+ +LG + W++ + + + R AL+ C+
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 296 GSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF 351
G L +AR + D+++ D+V +N +I GYA G EEAL LF + G+ PS TF
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 352 VAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
+++ + +++ +I +++K YG+ P + + +++ G + +L R MK
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 412 TD---PDSVLWGTLLWA-CR 427
+ P +V + + CR
Sbjct: 566 AEGIPPTNVTYSVIFKGLCR 585
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 149 YVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEG 204
YV L+ + + G++ A+KVFDE+++RSL VS ++ Y K G L E L
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 205 MEADSR--DVVCWNVMI----------------DEYAQNGM-PNECLLL----------- 234
ME DV ++ +I DE + G+ PN+ +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 235 -------FRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTA 287
++KML++ ++PD + +++ + G L + R I + + T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 288 LVDMYCKCGSLDDA---RKIFD-NIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMG 343
L+D +C+ G ++ A RK D N ++ D V +++++ G G +A R EM G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 344 VKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEG 403
+KP DVT+ ++ A G G+++ M++ G P + + ++N L + G+++
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 404 ---YDLVRGMKTDPDSVLWGTLLWACRLHKNVS 433
D + + PD + + TLL H N S
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS 572
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 83 PNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
PN ++T++IH HS + D Y +ML++ ++P+ ++++++G +L AAR I
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+I+ + T L+ + RGGDV +A ++ EM + + V +A++ K
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 192 HGRLREA-RLLFEGMEADSR-DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
GR+ +A R L E + A + D V + +M+D + + G L ++M ++ P +T
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 250 LLAVLSSCGQLGALESG 266
+L+ +LG +++
Sbjct: 523 YNVLLNGLCKLGQMKNA 539
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 56/197 (28%)
Query: 280 VEVRVGTALVDMYCKCGSLDDARKIFDNIVDRD----VVAWNSMIMGYAIHGYSEEALR- 334
+ V V L++ +CK G++ DA+K+FD I R VV++N++I GY G +E R
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 335 ----------------------------------LFDEMCGMGVKPSDVTFVAVLTACGH 360
LFDEMC G+ P+DV F ++ GH
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH--GH 355
Query: 361 SGLVSKGWEIFNLMKNGY------GMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---K 411
S+ EI +LMK Y G++P I + +VN + G L ++V GM
Sbjct: 356 ----SRNGEI-DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 412 TDPDSVLWGTLLWA-CR 427
PD + + TL+ CR
Sbjct: 411 LRPDKITYTTLIDGFCR 427
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/280 (17%), Positives = 124/280 (44%), Gaps = 13/280 (4%)
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
+V +N++++++ + G ++ +F ++ ++P ++ +++ ++G L+ G +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYSE 330
+ + +V +AL++ CK +D A +FD + R ++ N +I IHG+S
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP-NDVIFTTLIHGHSR 357
Query: 331 EA-----LRLFDEMCGMGVKPSDVTFVAVLTA-CGHSGLVSKGWEIFNLMKNGYGMEPKI 384
+ +M G++P V + ++ C + LV+ + +++ G+ P
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR--GLRPDK 415
Query: 385 EHFGCMVNLLGRAGRLEEGYDLVRGMKTDP---DSVLWGTLLWA-CRLHKNVSLGEEIAE 440
+ +++ R G +E ++ + M + D V + L+ C+ + + + E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 441 FILSHNLASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSG 480
+ + TY ++ + + G+ K+ M+ G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 167/380 (43%), Gaps = 26/380 (6%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLF-NRTPTPNVFLWTSIIHA---HSHSDQALSF 104
G+ P L S+ VG L +++L NR + + + ++I H +D+A F
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 105 YARMLAQPVEPNAFTFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYAR 160
+ M+ + P+ ++++++ G N A+A+ + + + + T L+ +Y
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT----HTILLSSYY- 238
Query: 161 GGDVFSAEKVFDEMS----ERSLVSVTAMLTCYAKHGRLREARLLFEGMEADS--RDVVC 214
++ + E+ + +M + +V+ ++++ K G++ E LL ME S + V
Sbjct: 239 --NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 215 WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVG 274
+ ++D + + L L+ +M+ + D + ++ + G L +
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 275 NHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSE 330
V TALVD CK G L A I ++++ +VV ++SMI GY G E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 331 EALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCM 390
EA+ L +M V P+ T+ V+ +G E+ M+ G+E +
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR-LIGVEENNYILDAL 475
Query: 391 VNLLGRAGRLEEGYDLVRGM 410
VN L R GR++E LV+ M
Sbjct: 476 VNHLKRIGRIKEVKGLVKDM 495
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 73/272 (26%)
Query: 186 LTCYAKHGRLRE-ARLLFEGMEADSRDVVCWNVMIDEYAQNGMP-NECLLLFRKMLAEKV 243
L+C +G R + + G+ DSR WN +I ++ NG+ ++ L++ KM+A V
Sbjct: 69 LSCERLYGAARTLSAMCTFGVVPDSR---LWNSLIHQFNVNGLVHDQVSLIYSKMIACGV 125
Query: 244 RPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARK 303
PD L L+ +CK G L A
Sbjct: 126 SPDVFAL-----------------------------------NVLIHSFCKVGRLSFAIS 150
Query: 304 IFDN-IVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTF----------- 351
+ N ++ D V +N++I G HG ++EA + EM MG+ P V++
Sbjct: 151 LLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Query: 352 -----------VAVLTACGHSGLVSKGWEIFNLMKNGY------GMEPKIEHFGCMVNLL 394
++ L H+ L+S + + + ++ Y G +P + F ++N L
Sbjct: 211 NFVRAKALVDEISELNLITHTILLSSYYNL-HAIEEAYRDMVMSGFDPDVVTFSSIINRL 269
Query: 395 GRAGRLEEGYDLVRGMK---TDPDSVLWGTLL 423
+ G++ EG L+R M+ P+ V + TL+
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/413 (18%), Positives = 159/413 (38%), Gaps = 89/413 (21%)
Query: 76 LFNRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----- 127
+ ++ PNV ++S+I+ + ++A+S +M Q V PN FT+ +V+ G
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 128 ----------------------------------NLQAARAIHCHVIKFAVASAPYVSTG 153
++ + + ++ V T
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 154 LVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAKHGRLREARLLFEGMEAD- 208
L+ + +GGD +A +EM ER + VS +++ K G++ A ++GM
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKG 568
Query: 209 -SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESG- 266
D+ +N+M++ + G L L+ KM + ++P ++ V+ + G +E
Sbjct: 569 IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 267 ------------------RWIHSYVGNHKN--------------GVEV--RVGTALVDMY 292
R HK G+++ +V L+
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 293 CKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
CK G A + ++ R D V +NS++ GY + + +AL + M G+ P+
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLE 401
T+ ++ +GL+ + + + MK+ GM P + +++ + G ++
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKS-RGMRPDDFTYNALISGQAKIGNMK 800
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 200/467 (42%), Gaps = 52/467 (11%)
Query: 63 SYSSVGHLHHSVTLFNRTP----TPNVFLWTSIIHAHSHSDQ---ALSFYARMLAQPVEP 115
S+ G + + FN TPNV +T++IHA+ + + A + ML++ P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 116 NAFTFSSVLHGCNLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMS 175
N T+S+++ G HC + V A + + G+ DV K +D+ S
Sbjct: 587 NIVTYSALIDG---------HCKAGQ--VEKACQIFERMCGS-KDVPDVDMYFKQYDDNS 634
Query: 176 ER-SLVSVTAMLTCYAKHGRLREARLLFEG--MEADSRDVVCWNVMIDEYAQNGMPNECL 232
ER ++V+ A+L + K R+ EAR L + ME + + ++ +ID + G +E
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 233 LLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMY 292
+ +M T +++ ++ + + S + + V + T ++D
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 293 CKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSD 348
CK G D+A K+ + ++ +VV + +MI G+ + G E L L + M GV P+
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 349 VTFVAVLTACGHSGLVSKGWEIFNLMKNGY------GMEPKIEHFGCMVNLLGRAGRLEE 402
VT+ ++ C +G + + MK + G IE F + G L+E
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN--KEFIESLGLLDE 872
Query: 403 -GYDLVRGMKTDP----DSVLWGTLLWACRLHKNVSLGEEIAEFILSHNLAS-SGTYVLL 456
G D T P +L L+ A RL + L EE+A F S L S TY L
Sbjct: 873 IGQD-----DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATF--SATLVDYSSTYNSL 925
Query: 457 SNIYAASGNWVGAAKVRSLMKGSGV--EKEPGCSIIE---VNNRIHE 498
+ A ++ S M GV E + CS+I+ N++I E
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 204/519 (39%), Gaps = 58/519 (11%)
Query: 63 SYSSVGHLHHSVTLF-NRTPTPNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAF 118
S VG ++TL P+ +T +I + ++A+ F RM A PN
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 119 TFSSVLHGC----NLQAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEM 174
T+S++L GC L + + ++ +P + LV AY GD A K+ +M
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 175 SE----RSLVSVTAMLTCYAKHGRLREARLLFEGMEADSR----DVVCWNVMIDEYAQ-- 224
+ V ++ LL +A S VV + + + +
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 225 --NGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEV 282
G + + R+M+ + PD T VL+ +E + + +V
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 283 RVGTALVDMYCKCGSLDDARKIFDNIVD----RDVVAWNSMIMGYAIHGYSEEALRLFDE 338
T +VD +CK G ++ ARK F+ + + +VV + ++I Y A LF+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 339 MCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLM---------------KNGYGMEPK 383
M G P+ VT+ A++ +G V K +IF M + P
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 384 IEHFGCMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLLWA-CRLHKNVSLGEEIA 439
+ +G +++ ++ R+EE L+ M +P+ +++ L+ C++ K + +E+
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK-LDEAQEVK 697
Query: 440 EFILSHNL-ASSGTYVLLSNIYAASGNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIH- 497
+ H A+ TY L + Y A+KV S M E C+ N I+
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM------LENSCA---PNVVIYT 748
Query: 498 EFIAGDLRHPKSQDIY---LMLEEMNCRLKANGYTPKTD 533
E I G + K+ + Y M+EE C+ YT D
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 160/361 (44%), Gaps = 21/361 (5%)
Query: 83 PNVFLWTSIIHAHSHS---DQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
P+ +T +I A D+A + + M+ + +PN T++ ++ G ++ A +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERS----LVSVTAMLTCYAK 191
++K + + L+ Y + G V A ++ M +R+ + + ++ +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 192 HGRLREARLLFEGMEAD--SRDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEIT 249
G+ +A L + M + S D+V +NV+ID + G N L M + PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 250 LLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIV 309
A++++ + G + + ++ GT L+D CK G DA I + +V
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 310 DRDVV----AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVS 365
++ + N ++ + +E L + ++ +G+ PS VT+ ++ SG ++
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 366 KGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---TDPDSVLWGTL 422
+ I LMK G P + + ++N L + GR+EE L+ M+ P+ V + +
Sbjct: 599 GSFRILELMKLS-GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 423 L 423
+
Sbjct: 658 V 658
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 56/313 (17%)
Query: 130 QAARAIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSER-----SLVSVTA 184
+AA ++K ++ T L+ + RG ++ A KVFD MS+ + VS +
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 185 MLTCYAKHGRLREA-----RLLFEGMEADSRDVVCWNVMIDEYAQNGMPNECLLLFRKML 239
++ + GRL EA ++ +G + +R + V+I G+ ++ LF +M+
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT---YTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 240 AEKVRPDEITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLD 299
+P+ +H+Y T L+D C+ G ++
Sbjct: 329 PRGCKPN----------------------VHTY-------------TVLIDGLCRDGKIE 353
Query: 300 DA----RKIFDNIVDRDVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVL 355
+A RK+ + + V+ +N++I GY G A L M KP+ TF ++
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 356 TACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK---T 412
G K + M + G+ P I + +++ L R G + Y L+ M
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 413 DPDSVLWGTLLWA 425
+PD + + ++ A
Sbjct: 473 EPDCLTFTAIINA 485
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 214 CWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIHSYV 273
C++ ++ A+ + + +R+M A+ I ++++ + G E+ S +
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 274 GNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVVAWNSMIMGYAIHGYS---- 329
++ +GT+L+ +C+ +L DA K+FD + A NS+ IHG
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 330 -EEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEHFG 388
EEA L D+M G +PS T+ ++ A GL+ K + +F+ M G +P + +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYT 340
Query: 389 CMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWGTLL 423
+++ L R G++EE + R M D P + + L+
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 47/281 (16%)
Query: 141 KFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSE----RSLVSVTAMLTCYAKHGRLR 196
KF A T L+GA++ +F +M E ++ T ++ +AK GR+
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 197 EARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVL 254
A L + M++ S D+V +NV ID + + G + F ++ A ++PDE+T
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY---- 276
Query: 255 SSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDRDVV 314
T+++ + CK LD+A ++F+++ V
Sbjct: 277 -------------------------------TSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 315 ----AWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEI 370
A+N+MIMGY G +EA L + G PS + + +LT G V + ++
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 371 FNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMK 411
F MK P + + ++++L RAG+L+ ++L M+
Sbjct: 366 FEEMKKDAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 195/488 (39%), Gaps = 73/488 (14%)
Query: 83 PNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTFSSVLHGC----NLQAARAI 135
P +T++I A S HSD L+ + +M EP F++++ G + +A ++
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 136 HCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSL----VSVTAMLTCYAK 191
+ ++ + + + ++ + G V A K F E+ L V+ T+M+ K
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 192 HGRLREARLLFEGMEADSRDVVC---WNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEI 248
RL EA +FE +E + R V C +N MI Y G +E L + A+ P I
Sbjct: 286 ANRLDEAVEMFEHLEKNRR-VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 249 TLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNI 308
+L+ ++G ++ + + + L+DM C+ G LD A ++ D++
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 309 VDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLV 364
+V N M+ +EA +F+EM P ++TF +++ G G V
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 365 SKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGM---KTDPDSVLWGT 421
++++ M + I + + N GR E+G+ + + M PD L T
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH-GRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 422 ----LLWACRLHKNVSLGEEI----------AEFILSHNLASSG----TYVLLSNIYAAS 463
+ A K ++ EEI + IL H L +G TY L ++
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM---- 578
Query: 464 GNWVGAAKVRSLMKGSGVEKEPGCSIIEVNNRIHEF-IAGDLRHPKSQDIYLMLEEMNCR 522
KE GC + + R + I G + K Y +LEEM
Sbjct: 579 -------------------KEQGCVL---DTRAYNIVIDGFCKCGKVNKAYQLLEEM--- 613
Query: 523 LKANGYTP 530
K G+ P
Sbjct: 614 -KTKGFEP 620
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 170/400 (42%), Gaps = 28/400 (7%)
Query: 49 GLDPHPILNFKLQRSYSSVGHLHHSVTLF-----NRTPTPNVFLWTSIIHAHSHS---DQ 100
GL P + + L +V +F NR P + + ++I + + D+
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR-VPCTYAYNTMIMGYGSAGKFDE 326
Query: 101 ALSFYARMLAQPVEPNAFTFSSVLHGCNLQAARAIHCHVI--KFAVASAPYVSTG--LVG 156
A S R A+ P+ ++ +L C + + + + +AP +ST L+
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILT-CLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 157 AYARGGDVFSAEKVFDEMSERSLV----SVTAMLTCYAKHGRLREARLLFEGMEAD--SR 210
R G + +A ++ D M + L +V M+ K +L EA +FE M+ +
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 211 DVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDEITLLAVLSSCGQLGALESGRWIH 270
D + + +ID + G ++ ++ KML R + I +++ + G E G I+
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 271 SYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDNIVDR----DVVAWNSMIMGYAIH 326
+ N ++++ +D K G + R +F+ I R D +++ +I G
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 327 GYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGLVSKGWEIFNLMKNGYGMEPKIEH 386
G++ E LF M G + V+ G V+K +++ MK G EP +
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVT 624
Query: 387 FGCMVNLLGRAGRLEEGYDLVRGMKT---DPDSVLWGTLL 423
+G +++ L + RL+E Y L K+ + + V++ +L+
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 149/363 (41%), Gaps = 23/363 (6%)
Query: 82 TPNVFLWTSIIHAHS---HSDQALSFYARMLAQPVEPNAFTFSSVL-----HGCNLQAAR 133
TP+ + S+I D A Y +ML N+ ++S++ HG +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG-RKEDGH 502
Query: 134 AIHCHVIKFAVASAPYVSTGLVGAYARGGDVFSAEKVFDEMSERSLV----SVTAMLTCY 189
I+ +I + + + + G+ +F+E+ R V S + ++
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 190 AKHGRLREARLLFEGMEADS--RDVVCWNVMIDEYAQNGMPNECLLLFRKMLAEKVRPDE 247
K G E LF M+ D +N++ID + + G N+ L +M + P
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 248 ITLLAVLSSCGQLGALESGRWIHSYVGNHKNGVEVRVGTALVDMYCKCGSLDDARKIFDN 307
+T +V+ ++ L+ + + + + V + ++L+D + K G +D+A I +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 308 IVDR----DVVAWNSMIMGYAIHGYSEEALRLFDEMCGMGVKPSDVTFVAVLTACGHSGL 363
++ + ++ WNS++ EAL F M + P+ VT+ ++
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 364 VSKGWEIFNLMKNGYGMEPKIEHFGCMVNLLGRAGRLEEGYDLVRGMKTD---PDSVLWG 420
+K + + M+ GM+P + M++ L +AG + E L K + PDS +
Sbjct: 743 FNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 421 TLL 423
++
Sbjct: 802 AMI 804