Miyakogusa Predicted Gene

Lj4g3v2827910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2827910.1 Non Chatacterized Hit- tr|I1K526|I1K526_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49995
PE,84.04,0,seg,NULL; PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE
FAMILY PROTEIN,NULL; NADH DEHYDROGENASE-RELA,CUFF.51753.1
         (544 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08740.1 | Symbols: NDC1 | NAD(P)H dehydrogenase C1 | chr5:28...   703   0.0  
AT2G29990.1 | Symbols: NDA2 | alternative NAD(P)H dehydrogenase ...    73   5e-13
AT1G07180.1 | Symbols: ATNDI1, NDA1 | alternative  NAD(P)H dehyd...    63   5e-10
AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:25...    53   5e-07
AT4G05020.1 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:25...    53   5e-07
AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 | chr4:11...    49   8e-06

>AT5G08740.1 | Symbols: NDC1 | NAD(P)H dehydrogenase C1 |
           chr5:2848752-2851323 REVERSE LENGTH=519
          Length = 519

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/477 (72%), Positives = 392/477 (82%), Gaps = 19/477 (3%)

Query: 68  ELSESEKARANIFVWPDNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSER 127
           E+S++E A    + WPDNKRPRVCILGGGFGGLYTALRLESL WPEDKKPQ+ LVDQSER
Sbjct: 62  EISDNETA-PRTYSWPDNKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSER 120

Query: 128 FVFKPMLYELLSGEVDEWEIAPRFSDLLANTSVRFLKDRVKLLHPSDHGGMNGSKASTSG 187
           FVFKPMLYELLSGEVD WEIAPRFSDLL NT ++FL+DRVK L P DH G+NGS+ S +G
Sbjct: 121 FVFKPMLYELLSGEVDVWEIAPRFSDLLTNTGIQFLRDRVKTLLPCDHLGVNGSEISVTG 180

Query: 188 GTVHLESGLHIEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNNRLTTLERKTF 247
           GTV LESG  IEYDWLVLALGAE+KLDVVPGA E A PF TLEDA +VN +L+ LERK F
Sbjct: 181 GTVLLESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKNF 240

Query: 248 GKDLQVSVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPSAPPGNREAAMKVLS 307
                + VA+VGCGY+GVELAAT++ERLQ+RGIV++INV   I  SAP GNREAAMKVL+
Sbjct: 241 KDGSAIKVAVVGCGYAGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLT 300

Query: 308 SRKVELLLGYFVRGIRRVSESESSDTLTKVDENSIGTVHDSEKYILDLQPAERGAQSKII 367
           SRKV+LLLGY V+ I+R S  E                 + E Y L+LQPAERG +S+II
Sbjct: 301 SRKVQLLLGYLVQSIKRASNLE-----------------EDEGYFLELQPAERGLESQII 343

Query: 368 EADLVLWTVGSKPPLPQLESSDVSFVIPLNARGQTETDETLRVKGHPRIFALGDSSALRD 427
           EAD+VLWTVG+KP L +LE S  + V+PLNARGQ ETDETLRVKGHPRIFALGDSS+LRD
Sbjct: 344 EADIVLWTVGAKPLLTKLEPSGPN-VLPLNARGQAETDETLRVKGHPRIFALGDSSSLRD 402

Query: 428 SNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFFE 487
           SNG+ILP TAQVAFQ+ADFTGWN+WAAIN RPLLPFRFQNLGEMMTLGR DAAISPSF E
Sbjct: 403 SNGKILPTTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLGEMMTLGRYDAAISPSFIE 462

Query: 488 GLTLEGPIGHTARKIAYLIRLPTDEHKLKVGISWFTKSAIDSVASLQGTLSKVLSGS 544
           GLTLEGPIGH ARK+AYLIRLPTDEH+  V ISWF KSA+DS+A LQ  L+KVLSGS
Sbjct: 463 GLTLEGPIGHAARKLAYLIRLPTDEHRFMVRISWFAKSAVDSIALLQSNLTKVLSGS 519


>AT2G29990.1 | Symbols: NDA2 | alternative NAD(P)H dehydrogenase 2 |
           chr2:12793562-12795913 REVERSE LENGTH=508
          Length = 508

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 198/490 (40%), Gaps = 110/490 (22%)

Query: 84  DNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSERFVFKPMLYELLSGEVD 143
           + ++PRV +LG G+ G     RL  ++  +     +  V      VF P+L     G ++
Sbjct: 68  EGEKPRVVVLGSGWAGC----RL--MKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLE 121

Query: 144 EWEIAPRFSDLLANTSVRFLKDRVKLLHPSDHGGM----NGSKASTSGGTVHLES---GL 196
              +A   S             R++     + G      N S+       VH E+   GL
Sbjct: 122 FRSVAEPIS-------------RIQPAISREPGSFFFLANCSRLDADAHEVHCETLTDGL 168

Query: 197 H--------IEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNNRL--TTLERKT 246
           +        I YD LV+A GAEA    + G  E AI    +  A+++  +L    +   T
Sbjct: 169 NTLKPWKFKIAYDKLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDT 228

Query: 247 FGKDLQVSVAIVGCG----------YSGVELAATVAERLQNR--GIVRAINVDTM----I 290
            G   +    ++ C           +SG EL+  + + ++ R   +   I+V  +    I
Sbjct: 229 PGISKEEKRRLLHCVVVGGGPTGVEFSG-ELSDFIMKDVRQRYAHVKDDIHVTLIEARDI 287

Query: 291 CPSAPPGNREAAMKVLSSRKVELLLGYFVRGIRRVSESESSDTLTKVDENSIGTVHDSEK 350
             S     R  A+K L+   V      FVRGI +  +S+                    K
Sbjct: 288 LSSFDDRLRRYAIKQLNKSGVR-----FVRGIVKDVQSQ--------------------K 322

Query: 351 YILDLQPAERGAQSKIIEADLVLWTVGSKP-PLPQLESSDVSFVIPLNARGQTETDETLR 409
            ILD            +   L++W+ G  P P  +      S  +P +  G+   DE +R
Sbjct: 323 LILD--------DGTEVPYGLLVWSTGVGPSPFVR------SLGLPKDPTGRIGIDEWMR 368

Query: 410 VKGHPRIFALGDSSALRDSNGR-ILPATAQVAFQQADFTGWNLWAAI----NGRPL---- 460
           V     +FA+GD S   ++ G+  LPA AQVA ++  +   NL  AI     GR      
Sbjct: 369 VPSVQDVFAIGDCSGYLETTGKPTLPALAQVAEREGKYLA-NLLNAIGKGNGGRANSAKE 427

Query: 461 ----LPFRFQNLGEMMTLGRNDAAIS---PSFFEGLTLEGPIGHTARKIAYLIRLPTDEH 513
               +PF +++LG M T+GR  A +        +G+++ G +     + AYL R+ +  +
Sbjct: 428 IELGVPFVYKHLGSMATIGRYKALVDLRESKDAKGISMTGFVSWFIWRSAYLTRVISWRN 487

Query: 514 KLKVGISWFT 523
           +  V I+WFT
Sbjct: 488 RFYVAINWFT 497


>AT1G07180.1 | Symbols: ATNDI1, NDA1 | alternative  NAD(P)H
           dehydrogenase 1 | chr1:2204414-2206773 FORWARD
           LENGTH=510
          Length = 510

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 195/482 (40%), Gaps = 94/482 (19%)

Query: 84  DNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSERFVFKPMLYELLSGEVD 143
           + ++PRV +LG G+ G      +++  +       +  V      VF P+L     G ++
Sbjct: 70  EGEKPRVLVLGSGWAGCRVLKGIDTSIY------DVVCVSPRNHMVFTPLLASTCVGTLE 123

Query: 144 EWEIAPRFSDLLANTS-----VRFLKDRVKLLHPSDHGGMNGSKASTSGGTVHLESGLHI 198
              +A   S +    S       FL +  KL   +D+  ++  +  T G +        I
Sbjct: 124 FRSVAEPISRIQPAISREPGSYYFLANCSKL--DADNHEVH-CETVTEGSSTLKPWKFKI 180

Query: 199 EYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDA----RKVNNRLTTLERKTFGKDLQVS 254
            YD LVLA GAEA    + G  E AI    +  A    RK+   L   E    G+D +  
Sbjct: 181 AYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKR 240

Query: 255 VAIVGCG----------YSGVELAATVAERLQNR--GIVRAINVDTM----ICPSAPPGN 298
             ++ C           +SG EL+  + + ++ R   +   I V  +    I  S     
Sbjct: 241 --LLHCVVVGGGPTGVEFSG-ELSDFIMKDVRQRYSHVKDDIRVTLIEARDILSSFDDRL 297

Query: 299 REAAMKVLSSRKVELLLGYFVRGIRRVSESESSDTLTKVDENSIGTVHDSEKYILDLQPA 358
           R  A+K L+   V+L     VRGI  V E +                   +K ILD    
Sbjct: 298 RHYAIKQLNKSGVKL-----VRGI--VKEVKP------------------QKLILD---- 328

Query: 359 ERGAQSKIIEADLVLWTVGSKPPLPQLESSDV-SFVIPLNARGQTETDETLRVKGHPRIF 417
                   +    ++W+ G  P      SS V S   P +  G+   DE +RV     +F
Sbjct: 329 ----DGTEVPYGPLVWSTGVGP------SSFVRSLDFPKDPGGRIGIDEWMRVPSVQDVF 378

Query: 418 ALGDSSALRDSNGR-ILPATAQVAFQQADFTGWNLWAAI----NGRPLL--------PFR 464
           A+GD S   +S G+  LPA AQVA ++  +   NL+  +     GR           PF 
Sbjct: 379 AIGDCSGYLESTGKSTLPALAQVAEREGKYLA-NLFNVMGKAGGGRANSAKEMELGEPFV 437

Query: 465 FQNLGEMMTLGRNDAAIS---PSFFEGLTLEGPIGHTARKIAYLIRLPTDEHKLKVGISW 521
           +++LG M T+GR  A +        +G+++ G +     + AYL R+ +  ++  V I+W
Sbjct: 438 YKHLGSMATIGRYKALVDLRESKEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINW 497

Query: 522 FT 523
            T
Sbjct: 498 LT 499


>AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 |
           chr4:2572752-2576222 FORWARD LENGTH=619
          Length = 619

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 54/393 (13%)

Query: 68  ELSESEKARANIFVWPDNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSER 127
           E + S  A     V    K+ +V +LG G+ G      L + ++      ++ ++     
Sbjct: 39  EANASYGANGGAVVETGTKKKKVVLLGTGWAGTSFLKNLNNSQY------EVQIISPRNY 92

Query: 128 FVFKPMLYELLSGEVDEWEIAPRFSDL-LANTSVRFLKDRVKLLHPSDHGGMNGSKASTS 186
           F F P+L  +  G V+   +     ++   N    +L+     + P+       SK    
Sbjct: 93  FAFTPLLPSVTCGTVEARSVVEPIRNIGRKNVDTSYLEAECFKIDPASKKVYCRSK---Q 149

Query: 187 GGTVHLESGLHIEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNN--------- 237
           G + + +    ++YD+LV+A GA++    +PG  E       +EDA+++           
Sbjct: 150 GLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKA 209

Query: 238 ---RLTTLERKTFGKDLQVSVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPSA 294
               L+  ERK     + V     G  ++  EL   V E L              + P A
Sbjct: 210 SLPELSDEERKRILHFVVVGGGPTGVEFAA-ELHDFVTEDL------------VSLYPRA 256

Query: 295 PPGNREAAMKVLSSRKVELLLGYFVRGIRRVSESESSDTLTKVDENSIGTVHDSEKYILD 354
                + ++++      + +L  F + I   +E + S     V   S+ T  + +    D
Sbjct: 257 -----KGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEK----D 307

Query: 355 LQPAERGAQSKIIEADLVLWT--VGSKPPLPQLESSDVSFVIPLNARGQTETDETLRVKG 412
           +    +G +   I   +++W+  +G++P +      D    I    R    TDE LRV+G
Sbjct: 308 ISAKTKGGEVSSIPYGMIVWSTGIGTRPVI-----KDFMKQIGQGNRRALATDEWLRVEG 362

Query: 413 HPRIFALGDSSALRDSNGRILPATAQVAFQQAD 445
              I+ALGD + +   N R +       F +AD
Sbjct: 363 TDNIYALGDCATI---NQRKVMEDVSAIFSKAD 392


>AT4G05020.1 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 |
           chr4:2572752-2576222 FORWARD LENGTH=582
          Length = 582

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 54/393 (13%)

Query: 68  ELSESEKARANIFVWPDNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSER 127
           E + S  A     V    K+ +V +LG G+ G      L + ++      ++ ++     
Sbjct: 39  EANASYGANGGAVVETGTKKKKVVLLGTGWAGTSFLKNLNNSQY------EVQIISPRNY 92

Query: 128 FVFKPMLYELLSGEVDEWEIAPRFSDL-LANTSVRFLKDRVKLLHPSDHGGMNGSKASTS 186
           F F P+L  +  G V+   +     ++   N    +L+     + P+       SK    
Sbjct: 93  FAFTPLLPSVTCGTVEARSVVEPIRNIGRKNVDTSYLEAECFKIDPASKKVYCRSK---Q 149

Query: 187 GGTVHLESGLHIEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNN--------- 237
           G + + +    ++YD+LV+A GA++    +PG  E       +EDA+++           
Sbjct: 150 GLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKA 209

Query: 238 ---RLTTLERKTFGKDLQVSVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPSA 294
               L+  ERK     + V     G  ++  EL   V E L              + P A
Sbjct: 210 SLPELSDEERKRILHFVVVGGGPTGVEFAA-ELHDFVTEDL------------VSLYPRA 256

Query: 295 PPGNREAAMKVLSSRKVELLLGYFVRGIRRVSESESSDTLTKVDENSIGTVHDSEKYILD 354
                + ++++      + +L  F + I   +E + S     V   S+ T  + +    D
Sbjct: 257 -----KGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNEK----D 307

Query: 355 LQPAERGAQSKIIEADLVLWT--VGSKPPLPQLESSDVSFVIPLNARGQTETDETLRVKG 412
           +    +G +   I   +++W+  +G++P +      D    I    R    TDE LRV+G
Sbjct: 308 ISAKTKGGEVSSIPYGMIVWSTGIGTRPVI-----KDFMKQIGQGNRRALATDEWLRVEG 362

Query: 413 HPRIFALGDSSALRDSNGRILPATAQVAFQQAD 445
              I+ALGD + +   N R +       F +AD
Sbjct: 363 TDNIYALGDCATI---NQRKVMEDVSAIFSKAD 392


>AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 |
           chr4:11436495-11439326 REVERSE LENGTH=580
          Length = 580

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 162/388 (41%), Gaps = 47/388 (12%)

Query: 70  SESEKARANIFVWPDNKRPRVCILGGGFGGLYTALRLESLEWPEDKKPQIALVDQSERFV 129
           SE+  + +N  V    ++ +V +LG G+ G   A  L++L    +   ++ ++     F 
Sbjct: 38  SEANPSYSNNGVETKTRKRKVVLLGTGWAG---ASFLKTLN---NSSYEVQVISPRNYFA 91

Query: 130 FKPMLYELLSGEVDEWEIAPRFSDLL--ANTSVRFLKDRVKLLHPSDHGGMNGSKASTSG 187
           F P+L  +  G V+   +     ++    N  + FL+     + P   G       S  G
Sbjct: 92  FTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDP---GSKKVYCRSKQG 148

Query: 188 GTVHLESGLHIEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNNR-LTTLERKT 246
                +    ++YD+LV+A GA++    +PG  E       +EDA+++ +  + + E+ +
Sbjct: 149 VNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKAS 208

Query: 247 F------GKDLQVSVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPSAPPGNRE 300
                   +   +   +VG G +GVE A+ + +   N  +V+            P     
Sbjct: 209 LPGLNEQERKRMLHFVVVGGGPTGVEFASELHD-FVNEDLVKLY----------PKAKNL 257

Query: 301 AAMKVLSSRKVELLLGYFVRGIRRVSESESSDTLTKVDENS-IGTVHDSEKYILDLQPAE 359
             + +L +   + +L  F + I   +E + +     V   S +  V+D E     +    
Sbjct: 258 VQITLLEA--ADHILTMFDKRITEFAEEKFTRDGIDVKLGSMVVKVNDKE-----ISAKT 310

Query: 360 RGAQSKIIEADLVLWT--VGSKPPLPQLESSDVSFVIPLNARGQTETDETLRVKGHPRIF 417
           +  +   I   +++W+  +G++P +      D    I    R    TDE LRV+G   I+
Sbjct: 311 KAGEVSTIPYGMIVWSTGIGTRPVI-----KDFMKQIGQGNRRALATDEWLRVEGCDNIY 365

Query: 418 ALGDSSALRDSNGRILPATAQVAFQQAD 445
           ALGD + +   N R +       F++AD
Sbjct: 366 ALGDCATI---NQRKVMEDIAAIFKKAD 390