Miyakogusa Predicted Gene
- Lj4g3v2826780.5
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2826780.5 tr|Q9FWS1|Q9FWS1_ARATH F1B16.14 protein
(Fragment) OS=Arabidopsis thaliana GN=F1B16.14 PE=4
SV=1,59.76,3e-19,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED,NULL; seg,NUL,CUFF.51857.5
(159 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 117 3e-27
AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 117 4e-27
AT4G12770.2 | Symbols: | Chaperone DnaJ-domain superfamily prot... 115 2e-26
AT4G12780.2 | Symbols: | Chaperone DnaJ-domain superfamily prot... 106 6e-24
AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 84 3e-17
AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein | chr1:282610... 79 1e-15
AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 74 6e-14
>AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506736-7511408 REVERSE LENGTH=891
Length = 891
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 66/98 (67%)
Query: 62 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 121
NIVDDLSSIFGA SG FQDV+G LAEKN+RDLQ Q
Sbjct: 724 NIVDDLSSIFGAPASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 783
Query: 122 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
R+QAE++RIG TLD EI+RW AGKEGNLRALLSTLQYV
Sbjct: 784 REQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYV 821
>AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512200-7516655 FORWARD LENGTH=904
Length = 904
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 66/98 (67%)
Query: 62 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 121
NIVDDLSSIFGA+ SG FQDV+G LAEKN+RDLQ Q
Sbjct: 737 NIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 796
Query: 122 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
R+Q E++RIG TLD EIKRW AGKEGNLRALLSTLQYV
Sbjct: 797 REQVEKDRIGVTLDVEIKRWGAGKEGNLRALLSTLQYV 834
>AT4G12770.2 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506736-7511408 REVERSE LENGTH=889
Length = 889
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 62 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 121
NIVDDLSSIFGA+ SG FQDV+G LAEKN+RDLQ Q
Sbjct: 724 NIVDDLSSIFGAS--QSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 781
Query: 122 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
R+QAE++RIG TLD EI+RW AGKEGNLRALLSTLQYV
Sbjct: 782 REQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYV 819
>AT4G12780.2 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512200-7516655 FORWARD LENGTH=894
Length = 894
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 66/115 (57%), Gaps = 17/115 (14%)
Query: 62 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 121
NIVDDLSSIFGA+ SG FQDV+G LAEKN+RDLQ Q
Sbjct: 710 NIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 769
Query: 122 RDQAERN-----------------RIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
R+Q E++ RIG TLD EIKRW AGKEGNLRALLSTLQYV
Sbjct: 770 REQVEKDNKKLRHLSILSHCFFPFRIGVTLDVEIKRWGAGKEGNLRALLSTLQYV 824
>AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily protein |
chr4:17230589-17235435 REVERSE LENGTH=1422
Length = 1422
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 110 LAEKNQRDLQTQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
LAEKN RDL QR+QAER RI ETLD E+KRWS+GKEGN+RALLSTLQY+
Sbjct: 1304 LAEKNMRDLVAQREQAERIRIAETLDTEVKRWSSGKEGNIRALLSTLQYI 1353
>AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein |
chr1:28261004-28266124 FORWARD LENGTH=1448
Length = 1448
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 110 LAEKNQRDLQTQRDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
LAEK RDL+TQ++Q ERNR+ E LD ++KRWS+GKE NLRAL+STLQY+
Sbjct: 1330 LAEKKLRDLKTQKEQTERNRLAEALDADVKRWSSGKENNLRALISTLQYI 1379
>AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr1:7605924-7608835 FORWARD LENGTH=523
Length = 523
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 2 NQQKNDNDLESFFXXXXXXXXXXXXXTNSTESAFEPQFQADVTRXXXXXXXXXXXXXXXX 61
N+Q +DL+SFF T +T ++ +
Sbjct: 302 NKQFGVDDLDSFFSARSSSVPKSRTTTETTRKQ-----ASNAPKKTPNGVSNAKKPPAPA 356
Query: 62 NIVDDLSSIFGAAPPSSGEFQDVEGXXXXXXXXXXXXXXXXXXXXXXXLAEKNQRDLQTQ 121
N+VDD S++FG P +F+++ G +A+ N RD Q++
Sbjct: 357 NLVDDFSALFGEDPIFR-QFEEIPGESEERRKARWDREQRTKSRVAQAVADMNNRDHQSR 415
Query: 122 RDQAERNRIGETLDFEIKRWSAGKEGNLRALLSTLQYV 159
+Q +R RI ET+D EI+RW+ GKEGN+RALLS+L V
Sbjct: 416 IEQEQRTRISETVDTEIRRWATGKEGNMRALLSSLHIV 453