Miyakogusa Predicted Gene

Lj4g3v2826700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2826700.1 Non Chatacterized Hit- tr|I1KBM3|I1KBM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6614
PE=,84.65,0,Snf7,Snf7; seg,NULL; SNF7 - RELATED,NULL;
coiled-coil,NULL,CUFF.51739.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09260.1 | Symbols: VPS20.2 | vacuolar protein sorting-associ...   248   2e-66
AT5G63880.1 | Symbols: VPS20.1 | SNF7 family protein | chr5:2556...   242   2e-64
AT5G63880.2 | Symbols: VPS20.1 | SNF7 family protein | chr5:2556...   228   2e-60

>AT5G09260.1 | Symbols: VPS20.2 | vacuolar protein
           sorting-associated protein 20.2 | chr5:2876797-2878355
           FORWARD LENGTH=216
          Length = 216

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/216 (61%), Positives = 159/216 (73%), Gaps = 1/216 (0%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPK+T+VDRAIL+LKTQRRKL QYQQ+L+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELTSKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD WL+NVEQQLADIELTSKQKAVF+SLK GN+A+KAIQSE+N++D
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAVLGEQLSAXXXXXXXXXXXXXXXXLTVQDLPEVPTS-VSE 179
           VQKLMDDTAEAKAYQDE++A+LGE+LSA                L V+D+PEVPT+ +  
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMP 180

Query: 180 DINEKLDLPEVPIQAPGEKVVEASSKRKVMEEPLPA 215
           +  EK+DLP+VP +AP       S+KRKV+EEPL A
Sbjct: 181 EEPEKMDLPDVPTKAPVASNETTSTKRKVLEEPLEA 216


>AT5G63880.1 | Symbols: VPS20.1 | SNF7 family protein |
           chr5:25563890-25565258 FORWARD LENGTH=219
          Length = 219

 Score =  242 bits (617), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/220 (59%), Positives = 158/220 (71%), Gaps = 6/220 (2%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKP++T+VDRAIL+LKTQRRKL QYQQKL+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELTSKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD W++NVEQQL DIELTSKQKAVF+SLK GN A+KAIQSE++++D
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQDEINAVLGEQLSAXXXXXXXXXXXXXXXXLTVQDLPEVPTSVSED 180
           VQKLMDDTA+AKAYQDE+NA+LGE+LSA                L V ++PEVPT  SE+
Sbjct: 121 VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE 180

Query: 181 INEKLDLPEVPIQAPGEK-----VVEASSKRKVMEEPLPA 215
            +EKLDLP+VP + P          E+++K KV+EEPLPA
Sbjct: 181 -SEKLDLPDVPTKTPVASNAEITPAESATKTKVLEEPLPA 219


>AT5G63880.2 | Symbols: VPS20.1 | SNF7 family protein |
           chr5:25563890-25565258 FORWARD LENGTH=243
          Length = 243

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/244 (53%), Positives = 158/244 (64%), Gaps = 30/244 (12%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKP++T+VDRAIL+LKTQRRKL QYQQKL+ VIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELTSKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVD W++NVEQQL DIELTSKQKAVF+SLK GN A+KAIQSE++++D
Sbjct: 61  ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD 120

Query: 121 VQKLMDDTAEAKAYQD------------------------EINAVLGEQLSAXXXXXXXX 156
           VQKLMDDTA+AKAYQD                        E+NA+LGE+LSA        
Sbjct: 121 VQKLMDDTADAKAYQDCENLYNLFCRAFVFDDSIYISECQELNAILGEKLSAEDEEDILA 180

Query: 157 XXXXXXXXLTVQDLPEVPTSVSEDINEKLDLPEVPIQAPGEKV-----VEASSKRKVMEE 211
                   L V ++PEVPT  SE+ +EKLDLP+VP + P          E+++K KV+EE
Sbjct: 181 EFDNLESQLIVDEMPEVPTKESEE-SEKLDLPDVPTKTPVASNAEITPAESATKTKVLEE 239

Query: 212 PLPA 215
           PLPA
Sbjct: 240 PLPA 243