Miyakogusa Predicted Gene
- Lj4g3v2825530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2825530.1 tr|G7J2U3|G7J2U3_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_3g109100 PE=4
S,32.61,0.000000000004,coiled-coil,NULL; seg,NULL,CUFF.51725.1
(228 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20310.1 | Symbols: | Adenine nucleotide alpha hydrolases-li... 66 2e-11
AT5G26150.1 | Symbols: | protein kinase family protein | chr5:9... 55 3e-08
AT4G31230.1 | Symbols: | Protein kinase protein with adenine nu... 54 6e-08
AT5G35380.1 | Symbols: | Protein kinase protein with adenine nu... 49 2e-06
AT5G12000.1 | Symbols: | Protein kinase protein with adenine nu... 49 3e-06
AT2G07020.1 | Symbols: | Protein kinase protein with adenine nu... 48 4e-06
AT2G24370.1 | Symbols: | Protein kinase protein with adenine nu... 48 6e-06
>AT5G20310.1 | Symbols: | Adenine nucleotide alpha hydrolases-like
superfamily protein | chr5:6857553-6859001 FORWARD
LENGTH=394
Length = 394
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 104 PLFSLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKEAESE 163
PL +D E+ R K E M +YHAAC+E + +EL W K E R++ AE E
Sbjct: 275 PLSPVDDATAEMRRLKKELKETMNMYHAACKEALMEKERAVELVMWKKKAELRIQMAE-E 333
Query: 164 NARCKTDIEVAKRLVVQEMENKVLRAEMKAMIEADERKKVLDALRQSQNFIKYQTLFHSL 223
AR ME K ++ + +D+RK V D L +S +K+++L H L
Sbjct: 334 TARMAI------------MEMKAVKGK-----GSDDRKMVWDTLGESHTVVKHESLLHIL 376
Query: 224 IVLFL 228
+VLFL
Sbjct: 377 VVLFL 381
>AT5G26150.1 | Symbols: | protein kinase family protein |
chr5:9137461-9140099 REVERSE LENGTH=703
Length = 703
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 107 SLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWN-----------LKQEQ 155
S +E E+ R KLE M++Y +AC+E ++ K EL W L +E
Sbjct: 287 STKDIEAEMRRLKLELKQTMDMYSSACKEALTAKRKANELNQWKIEEARKFEKARLSEEA 346
Query: 156 RLKEAESENARCKTDIEVAKRLV-VQEMENKVLR-AEMKAMIEADERKKVLDALRQSQNF 213
L AE E A+C+T +E A++ + E+E + + AEMKA+ E ++ + + AL + N
Sbjct: 347 ALAVAEIEKAKCRTAVEAAEKAQRMAELEGQRRKQAEMKAVSEEKDKDRAVSAL--AHND 404
Query: 214 IKYQ 217
++Y+
Sbjct: 405 VRYR 408
>AT4G31230.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain |
chr4:15173071-15176109 REVERSE LENGTH=764
Length = 764
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 109 DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRL---------KE 159
D +E E+ R KLE ME+Y AC+E ++ HK ELQ W L +E++
Sbjct: 335 DDVEAEMRRLKLELKQTMEMYSTACKEALTAKHKATELQRWKLAEERKFEEAKLAEEAAL 394
Query: 160 AESENARCKTDIEVAKRLVVQEMEN----KVLRAEMKAMIEADERKKVLDALRQSQNFIK 215
A +E + K+ + Q + + K + AE KA+ E++ R K ++AL + + K
Sbjct: 395 AIAEKEKAKSKAAMEAAEAAQRIADIESRKRVDAETKALKESEARTKAVNALAKDVRYRK 454
Query: 216 Y 216
Y
Sbjct: 455 Y 455
>AT5G35380.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain |
chr5:13593429-13596293 REVERSE LENGTH=731
Length = 731
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 106 FSL---DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE--- 159
FSL D +E E+ R K+E H ME+Y++AC+E S+ EL W ++E +L+E
Sbjct: 285 FSLQGQDELETEMRRLKMELKHTMEMYNSACKEAISAKKAANELLKWKAEKEHKLEEVRL 344
Query: 160 ------AESENARCKTDIEVAKRLVVQEMENKVLRAEMKAMIEA-DERKKVLDALR 208
A +E + K+ + + Q++ + L AE + IE DE+K+ + +LR
Sbjct: 345 SKEAAMAMAEREKEKSRAAMEAAVAAQKLSD--LEAEKRKHIETVDEKKRAVSSLR 398
>AT5G12000.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain |
chr5:3874151-3876780 REVERSE LENGTH=701
Length = 701
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 15/120 (12%)
Query: 111 MEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRL-----------KE 159
+E E+ R K+E M++Y +AC+E ++ K EL W +++ +R
Sbjct: 291 IEAEMKRLKIELKQTMDMYSSACKEALNAKKKANELNQWKMEEARRFEEARNAEEAALAV 350
Query: 160 AESENARCKTDIEVAKRL-VVQEMENKVLR-AEMKAMIEADERKKVLDALRQSQNFIKYQ 217
AE E A+C+ +E A++ + E+E + + AEMKA E+ E+ + L AL QN ++Y+
Sbjct: 351 AEMEKAKCRAALEAAEKAQRMAELEGQRRKQAEMKARRESQEKDRALSAL--VQNDVRYR 408
>AT2G07020.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain |
chr2:2908473-2911198 REVERSE LENGTH=700
Length = 700
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 105 LFSLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE----- 159
++S D +E E+ R KLE + M++Y++AC+E ++ IEL W +++ +L+E
Sbjct: 282 MYSQDDVESEMRRLKLELKYTMDMYNSACKEAIAAKKTTIELHKWKEERKHKLEEAILAK 341
Query: 160 ------AESENARCKT---DIEVAKRLVVQEMENKVLRAEMKAMIEADERKKVLDALRQS 210
AE+E A+ + +E A R+ E + + + E A+ E + K + AL S
Sbjct: 342 EAAMAIAENEKAKSRAAMEALEAAHRMAETEAQKRK-QIETAALREVEHENKAMHALPHS 400
Query: 211 QNFIKYQTL 219
+ T+
Sbjct: 401 NRMYRKYTI 409
>AT2G24370.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain |
chr2:10369979-10373063 REVERSE LENGTH=788
Length = 788
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 107 SLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDW--------------NLK 152
S+D +E E+ R KLE ME+Y AC+E ++ K ELQ W
Sbjct: 345 SIDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKATELQRWKLEEERKLEEARNAEEA 404
Query: 153 QEQRLKEAESENARCKTDIEVAKRLVVQEMENKVLRAEMKAMIEADERKKVLDALRQS 210
++ ++++ E A+R+ E + +V AEMKA+ E++E+ K L AL S
Sbjct: 405 ALAIAEKEKAKSKAAMEAAEAAQRIAELEAKKRV-NAEMKALKESEEKTKALTALANS 461