Miyakogusa Predicted Gene
- Lj4g3v2803800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2803800.1 Non Chatacterized Hit- tr|I1KT65|I1KT65_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32872 PE,93.16,0,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
coiled-coil,NULL; seg,NULL; A,CUFF.51684.1
(615 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223 FOR... 989 0.0
AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 524 e-149
AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 524 e-149
AT1G44120.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 429 e-120
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 70 4e-12
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 68 2e-11
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 68 2e-11
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 67 3e-11
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 59 1e-08
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 58 2e-08
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 57 4e-08
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 56 9e-08
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 53 5e-07
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 51 3e-06
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 50 7e-06
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 49 9e-06
>AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223
FORWARD LENGTH=2150
Length = 2150
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/615 (83%), Positives = 559/615 (90%), Gaps = 1/615 (0%)
Query: 1 MGLRERSSNMEDPDGTLASVAQCIEQLRQSSSSMQEKEYSLRQLLELIDTRENAFSAVGS 60
M LR+R+++MEDPDGTLASVAQCIEQLRQ SSS QE+EY L+QLL+LI+ RENAFSAVGS
Sbjct: 44 MSLRDRTTSMEDPDGTLASVAQCIEQLRQGSSSAQEREYCLKQLLDLIEMRENAFSAVGS 103
Query: 61 HSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVXXXXXXXXXXXXXKSNSTEG 120
HSQAVPVLVSLLRSGS+ VKIQAATVLGSLCKENELRVKV KS+S EG
Sbjct: 104 HSQAVPVLVSLLRSGSVGVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSVEG 163
Query: 121 QIAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWEQLQTGLKKGNVVESLLTGALKNLS 180
QIAAAKTIYAVS+GG KDHVGSKIFSTEGVVPVLW+QL++G KKG V + LLTGALKNLS
Sbjct: 164 QIAAAKTIYAVSEGGVKDHVGSKIFSTEGVVPVLWDQLRSGNKKGEV-DGLLTGALKNLS 222
Query: 181 SNTEGFWSATIQAGGVDILVKLLAAGQPSTLADVCFLLAAVMMEDASVCSKVLTAEVTKQ 240
S TEGFWS TI+AGGVD+LVKLL +GQ STL++VCFLLA +MMEDASVCS VLTA++TKQ
Sbjct: 223 STTEGFWSETIRAGGVDVLVKLLTSGQSSTLSNVCFLLACMMMEDASVCSSVLTADITKQ 282
Query: 241 LLKLLGSGNDDPVRAEAAGALKSLSAQCKEARREIANSSGIPALINATIAPSKEFMQGEC 300
LLKLLGSGN+ PVRAEAA ALKSLSAQ KEA+REIANS+GIP LINATIAPSKEFMQGE
Sbjct: 283 LLKLLGSGNEAPVRAEAAAALKSLSAQSKEAKREIANSNGIPVLINATIAPSKEFMQGEY 342
Query: 301 AQALQENAMCALANISGGLSYVISSLGQSLDSCTSPTQVADTLGALASALMIYDNKAEST 360
AQALQENAMCALANISGGLSYVISSLGQSL+SC+SP Q ADTLGALASALMIYD KAE+T
Sbjct: 343 AQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQTADTLGALASALMIYDGKAETT 402
Query: 361 RASDPLVVEQTLLKQFKQSLPFLVQERTIEALATLYGNPVLSTKLKNSDAKHLLVGLITM 420
RASDPLVVEQTLLKQFK LPFLVQERTIEALA+LYGN +LS KL NSDAK LLVGLITM
Sbjct: 403 RASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNSILSVKLSNSDAKRLLVGLITM 462
Query: 421 AANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSY 480
A NEVQDEL+KALL L EGSLW ALQGREG+QLLISLLGLSSEQQQECAVALLCLLS
Sbjct: 463 AVNEVQDELVKALLMLCNHEGSLWQALQGREGIQLLISLLGLSSEQQQECAVALLCLLSN 522
Query: 481 ENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPAL 540
ENDESKWAITAAGGIPPLVQILETGSAKA+EDSATIL+NLCNHSEDIRACVESADAVPAL
Sbjct: 523 ENDESKWAITAAGGIPPLVQILETGSAKAREDSATILRNLCNHSEDIRACVESADAVPAL 582
Query: 541 LWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYIFDALRSVLSVA 600
LWLLKNGSPNGK+IAAKTLNHLIHKSDT TISQLTALLTSDLP+SK+Y+ DAL+S+LSV
Sbjct: 583 LWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKIYVLDALKSMLSVV 642
Query: 601 PLSDILREGSAASDA 615
P +D+LREGSA++DA
Sbjct: 643 PFNDMLREGSASNDA 657
>AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/605 (46%), Positives = 393/605 (64%), Gaps = 1/605 (0%)
Query: 10 MEDPDGTLASVAQCIEQLRQSSSSMQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLV 69
M+DP+ +A+VAQ IEQL +SS Q+KE + +LL + + A +GS+ QA+P+ +
Sbjct: 29 MDDPEKAMATVAQLIEQLHAKTSSPQDKELTTARLLGIAKGKREARRLIGSYGQAMPLFI 88
Query: 70 SLLRSGSLNVKIQAATVLGSLCKENELRVKVXXXXXXXXXXXXXKSNSTEGQIAAAKTIY 129
S+LR+G+ K+ A++L LCK+ +LR+KV KS + E + AAA+ IY
Sbjct: 89 SMLRNGTTLAKVNVASILCVLCKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAIY 148
Query: 130 AVSQGG-AKDHVGSKIFSTEGVVPVLWEQLQTGLKKGNVVESLLTGALKNLSSNTEGFWS 188
VS G + DH+G KIF TEGVVP LW+QL + VVE +TGAL+NL +G+W
Sbjct: 149 EVSSAGISNDHIGMKIFITEGVVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYWR 208
Query: 189 ATIQAGGVDILVKLLAAGQPSTLADVCFLLAAVMMEDASVCSKVLTAEVTKQLLKLLGSG 248
T++ GVDI+V LL++ P++ A+ LLA +++ K+L + V K L++LL
Sbjct: 209 LTLEGSGVDIVVSLLSSDNPNSQANAASLLARLVLSFCDSIQKILNSGVVKSLIQLLEQK 268
Query: 249 NDDPVRAEAAGALKSLSAQCKEARREIANSSGIPALINATIAPSKEFMQGECAQALQENA 308
ND VRA AA AL++LSA EA++ + ++ G+ ALI A +APSKE MQG+ Q+LQE+A
Sbjct: 269 NDINVRASAADALEALSANSDEAKKCVKDAGGVHALIEAIVAPSKECMQGKHGQSLQEHA 328
Query: 309 MCALANISGGLSYVISSLGQSLDSCTSPTQVADTLGALASALMIYDNKAESTRASDPLVV 368
ALAN+ GG+ ++I LGQ S + D +GALA ALMI+ S DP V+
Sbjct: 329 TGALANVFGGMRHLIIYLGQVSQSPRLTEPIGDVIGALAYALMIFKQPESSENIFDPSVI 388
Query: 369 EQTLLKQFKQSLPFLVQERTIEALATLYGNPVLSTKLKNSDAKHLLVGLITMAANEVQDE 428
E L+K K L+QER +EA+A+LYGN LS L +++AK +L+ LITMA+ +V++
Sbjct: 389 ESILVKLLKPRDTKLIQERILEAMASLYGNSSLSCYLDDAEAKRVLIALITMASADVRER 448
Query: 429 LIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWA 488
LI L L + +W A+ REG+QL IS LGLSSEQ QE AV +L +L+ + D+SKWA
Sbjct: 449 LIICLSGLCHDKVGIWEAIGKREGIQLFISFLGLSSEQHQEYAVEMLKILTAQVDDSKWA 508
Query: 489 ITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGS 548
+TAAGGIPPLVQ+LETGS KAKED+A IL NLC HSE+IR CVE A +PA LWLLK G
Sbjct: 509 VTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFLWLLKTGG 568
Query: 549 PNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYIFDALRSVLSVAPLSDILRE 608
PN ++ +AKTL L+H +D TI+QL ALL D P SK+ + + L VLS A D++
Sbjct: 569 PNSQETSAKTLVKLVHTADPATINQLLALLLGDDPTSKIQVIEVLGHVLSKASQEDLVHR 628
Query: 609 GSAAS 613
G AA+
Sbjct: 629 GCAAN 633
>AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/605 (46%), Positives = 393/605 (64%), Gaps = 1/605 (0%)
Query: 10 MEDPDGTLASVAQCIEQLRQSSSSMQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLV 69
M+DP+ +A+VAQ IEQL +SS Q+KE + +LL + + A +GS+ QA+P+ +
Sbjct: 29 MDDPEKAMATVAQLIEQLHAKTSSPQDKELTTARLLGIAKGKREARRLIGSYGQAMPLFI 88
Query: 70 SLLRSGSLNVKIQAATVLGSLCKENELRVKVXXXXXXXXXXXXXKSNSTEGQIAAAKTIY 129
S+LR+G+ K+ A++L LCK+ +LR+KV KS + E + AAA+ IY
Sbjct: 89 SMLRNGTTLAKVNVASILCVLCKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAIY 148
Query: 130 AVSQGG-AKDHVGSKIFSTEGVVPVLWEQLQTGLKKGNVVESLLTGALKNLSSNTEGFWS 188
VS G + DH+G KIF TEGVVP LW+QL + VVE +TGAL+NL +G+W
Sbjct: 149 EVSSAGISNDHIGMKIFITEGVVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYWR 208
Query: 189 ATIQAGGVDILVKLLAAGQPSTLADVCFLLAAVMMEDASVCSKVLTAEVTKQLLKLLGSG 248
T++ GVDI+V LL++ P++ A+ LLA +++ K+L + V K L++LL
Sbjct: 209 LTLEGSGVDIVVSLLSSDNPNSQANAASLLARLVLSFCDSIQKILNSGVVKSLIQLLEQK 268
Query: 249 NDDPVRAEAAGALKSLSAQCKEARREIANSSGIPALINATIAPSKEFMQGECAQALQENA 308
ND VRA AA AL++LSA EA++ + ++ G+ ALI A +APSKE MQG+ Q+LQE+A
Sbjct: 269 NDINVRASAADALEALSANSDEAKKCVKDAGGVHALIEAIVAPSKECMQGKHGQSLQEHA 328
Query: 309 MCALANISGGLSYVISSLGQSLDSCTSPTQVADTLGALASALMIYDNKAESTRASDPLVV 368
ALAN+ GG+ ++I LGQ S + D +GALA ALMI+ S DP V+
Sbjct: 329 TGALANVFGGMRHLIIYLGQVSQSPRLTEPIGDVIGALAYALMIFKQPESSENIFDPSVI 388
Query: 369 EQTLLKQFKQSLPFLVQERTIEALATLYGNPVLSTKLKNSDAKHLLVGLITMAANEVQDE 428
E L+K K L+QER +EA+A+LYGN LS L +++AK +L+ LITMA+ +V++
Sbjct: 389 ESILVKLLKPRDTKLIQERILEAMASLYGNSSLSCYLDDAEAKRVLIALITMASADVRER 448
Query: 429 LIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWA 488
LI L L + +W A+ REG+QL IS LGLSSEQ QE AV +L +L+ + D+SKWA
Sbjct: 449 LIICLSGLCHDKVGIWEAIGKREGIQLFISFLGLSSEQHQEYAVEMLKILTAQVDDSKWA 508
Query: 489 ITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGS 548
+TAAGGIPPLVQ+LETGS KAKED+A IL NLC HSE+IR CVE A +PA LWLLK G
Sbjct: 509 VTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFLWLLKTGG 568
Query: 549 PNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYIFDALRSVLSVAPLSDILRE 608
PN ++ +AKTL L+H +D TI+QL ALL D P SK+ + + L VLS A D++
Sbjct: 569 PNSQETSAKTLVKLVHTADPATINQLLALLLGDDPTSKIQVIEVLGHVLSKASQEDLVHR 628
Query: 609 GSAAS 613
G AA+
Sbjct: 629 GCAAN 633
>AT1G44120.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:16780610-16787414 FORWARD LENGTH=2114
Length = 2114
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/611 (42%), Positives = 368/611 (60%), Gaps = 4/611 (0%)
Query: 7 SSNMEDPDGTLASVAQCIEQLRQSSSSMQEKEYSLRQLLELIDTRENAFSAVGSHSQAVP 66
+S M+DP+ ++ + IEQL SS QEKE S +LL L ++ + + A+P
Sbjct: 2 TSEMDDPEKAAVTITRLIEQLHAKKSSAQEKELSTARLLGLAKGKKECRKIISQNVNAMP 61
Query: 67 VLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVXXXXXXXXXXXXXKSNSTEGQIAAAK 126
+SLLRSG+L K+ +A+VL LCK+ +R K+ KS+S + + A+
Sbjct: 62 AFISLLRSGTLLAKLNSASVLTVLCKDKNVRSKILIGGCIPPLLSLLKSDSVDAKRVVAE 121
Query: 127 TIYAVSQGGAK-DHVGSKIFSTEGVVPVLWEQLQTGLKKGNVVESLLTGALKNLSSNTEG 185
IY VS G D+VG+KIF TEGVVP LW+QL+TG K+ VE L GAL+NL + +G
Sbjct: 122 AIYEVSLCGMDGDNVGTKIFVTEGVVPSLWDQLKTGKKQDKTVEGHLVGALRNLCGDKDG 181
Query: 186 FWSATIQAGGVDILVKLLAAGQPSTLADVCFLLAAVMMEDASVCSKVLTAEVTKQLLKLL 245
FW+ T++ GGVDI++KLL + P + ++ LLA ++ S SKV + + L++LL
Sbjct: 182 FWALTLEDGGVDIILKLLQSSNPVSQSNAASLLARLIRIFTSSISKVEESGAVQVLVQLL 241
Query: 246 GSGNDDPVRAEAAGALKSLSAQCKEARREIANSSGIPALINATIAPSKEFMQGECAQALQ 305
G N VRA AL++++++ +EA + GI LI+A +A SKE ++ E + LQ
Sbjct: 242 GEENSVFVRASVVNALEAITSKSEEAITVARDLDGIHLLISAVVASSKESVEEETERVLQ 301
Query: 306 ENAMCALANISGGLSYVISSLGQSLDSCTSPTQVADTLGALASALMIYDNKAESTR-ASD 364
ALAN+ GG+S +I LG S +AD LGALA AL + TR A D
Sbjct: 302 SYGTQALANLCGGMSGLIVYLGGLSLSPRLTEPIADILGALAYALRKFQLSCGDTREAFD 361
Query: 365 PLVVEQTLLKQFKQSLPFLVQERTIEALATLYGNPVLSTKLKNSDAKHLLVGLITMAANE 424
P + E L+K K L+ ER +EA+ +L+GN LS L N DAK +LV L +A +
Sbjct: 362 PTLTEGILVKLLKPRDTQLIHERILEAMESLFGNVDLSKLLNNVDAKRVLVCLTILATDG 421
Query: 425 VQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDE 484
++ +I L L K G +W A+ REG+Q+LI LGLSSEQ QE +V L +L+ +E
Sbjct: 422 PRERMITCLSNLCK-HGDVWDAIGKREGIQILIPYLGLSSEQHQELSVEFLAILTDNVEE 480
Query: 485 SKWAITAAGGIPPLVQILETG-SAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWL 543
S+WA+T+AGGIPPL+QILETG S KAK+D+ ++ NLC HSE+IR CVE A A+PALL L
Sbjct: 481 SRWAVTSAGGIPPLLQILETGVSQKAKDDAVRVILNLCCHSEEIRLCVEKAGAIPALLGL 540
Query: 544 LKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYIFDALRSVLSVAPLS 603
LKNG P ++ +A TL LI +D + I Q+ AL D P SK ++ L VL+ A L
Sbjct: 541 LKNGGPKSQESSANTLLKLIKTADPSVIEQVQALFLGDAPKSKTHLIRVLGHVLASASLE 600
Query: 604 DILREGSAASD 614
+ + +GSAA++
Sbjct: 601 EFVTKGSAANN 611
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 42/190 (22%)
Query: 413 LLVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAV 472
LLVGL++ + +Q+ + ALL LS E + A+ + ++ +L S + +E A
Sbjct: 398 LLVGLLSTPDSRIQEHSVTALLNLSICENN-KGAIVSAGAIPGIVQVLKKGSMEARENAA 456
Query: 473 ALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLC----NHSEDIR 528
A L LS DE+K I A G IPPLV +L G+ + K+D+AT L NLC N + IR
Sbjct: 457 ATLFSLSV-IDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIR 515
Query: 529 ------------------------------------ACVESADAVPALLWLLKNGSPNGK 552
A + S+DAVP+L+ ++ GSP +
Sbjct: 516 AGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNR 575
Query: 553 DIAAKTLNHL 562
+ AA L HL
Sbjct: 576 ENAAAVLVHL 585
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 11/135 (8%)
Query: 453 VQLLISLLGLSSEQQQECAV-ALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKE 511
+ LL+ LL + QE +V ALL L EN+ K AI +AG IP +VQ+L+ GS +A+E
Sbjct: 396 IPLLVGLLSTPDSRIQEHSVTALLNLSICENN--KGAIVSAGAIPGIVQVLKKGSMEARE 453
Query: 512 DSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL-IHKSD--- 567
++A L +L E+ + + + A+P L+ LL G+ GK AA L +L I++ +
Sbjct: 454 NAAATLFSLSVIDEN-KVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGK 512
Query: 568 ---TTTISQLTALLT 579
I LT LLT
Sbjct: 513 AIRAGVIPTLTRLLT 527
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 453 VQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKED 512
++ L+ L + + Q A + LL+ N +++ AI AG IP LV +L T ++ +E
Sbjct: 354 IEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEH 413
Query: 513 SATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL-IHKSDTTTI 571
S T L NL + E+ + + SA A+P ++ +LK GS ++ AA TL L + + TI
Sbjct: 414 SVTALLNL-SICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI 472
Query: 572 SQLTAL 577
L A+
Sbjct: 473 GALGAI 478
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 453 VQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKED 512
+ LL+ LL + QE AV L LS ND +K AI AG I PL+ +LE GS++AKE+
Sbjct: 588 IVLLVELLYSTDSATQENAVTALLNLSI-NDNNKKAIADAGAIEPLIHVLENGSSEAKEN 646
Query: 513 SATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL-IHKSDTTTI 571
SA L +L E+ + + + A+ L+ LL NG+P GK AA L +L IH+ + I
Sbjct: 647 SAATLFSLSVIEEN-KIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 705
Query: 572 SQLTAL-LTSDLPDSKVYIFDALRSVLS 598
Q A+ DL D + D +VL+
Sbjct: 706 VQSGAVRYLIDLMDPAAGMVDKAVAVLA 733
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 484 ESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWL 543
E + AI GGIP LV+++E GSA+ KE++A L L +S V AVP L+ L
Sbjct: 740 EGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVAL 799
Query: 544 LKNGSPNGKDIAAKTLNHL 562
++G+P ++ A L++
Sbjct: 800 SQSGTPRAREKAQALLSYF 818
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 453 VQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKED 512
+ LL+ LL + QE AV L LS ND +K AI AG I PL+ +LE GS++AKE+
Sbjct: 585 IVLLVELLYSTDSATQENAVTALLNLSI-NDNNKKAIADAGAIEPLIHVLENGSSEAKEN 643
Query: 513 SATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL-IHKSDTTTI 571
SA L +L E+ + + + A+ L+ LL NG+P GK AA L +L IH+ + I
Sbjct: 644 SAATLFSLSVIEEN-KIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 702
Query: 572 SQLTAL-LTSDLPDSKVYIFDALRSVLS 598
Q A+ DL D + D +VL+
Sbjct: 703 VQSGAVRYLIDLMDPAAGMVDKAVAVLA 730
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 42/196 (21%)
Query: 408 SDAKHLLVGLITMAAN-EVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQ 466
S A LLV L+T++ + Q+ + ++L LS + + + V ++ +L S +
Sbjct: 396 SGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSME 455
Query: 467 QQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLC----N 522
+E A A L LS DE+K I AAG IPPLV +L GS + K+D+AT L NLC N
Sbjct: 456 ARENAAATLFSLSV-IDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGN 514
Query: 523 HSEDIRAC------------------------------------VESADAVPALLWLLKN 546
+ +RA V +ADAVP L+ +++
Sbjct: 515 KGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRS 574
Query: 547 GSPNGKDIAAKTLNHL 562
GSP K+ +A L HL
Sbjct: 575 GSPRNKENSAAVLVHL 590
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 459 LLGLSSEQQQE--CAVALLCLLSYENDESKWAITAAGGIPPLVQILE-TGSAKAKEDSAT 515
LL L+S+Q ++ A + LL+ +N+ ++ AI A+G IP LV +L + ++ +E + T
Sbjct: 361 LLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVT 420
Query: 516 ILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTL 559
+ NL E+ V S+ AVP ++ +L+ GS ++ AA TL
Sbjct: 421 SILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATL 464
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 414 LVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVA 473
LV L+ + + AL LS + + +Q + V+ L+ LL E + AVA
Sbjct: 602 LVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAK-AVKYLVELLDPDLEMVDK-AVA 659
Query: 474 LLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVES 533
LL LS E + AI GGIP LV+ ++ GS + KE++A++L LC +S V
Sbjct: 660 LLANLSAVG-EGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQ 718
Query: 534 ADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSD 567
A+P L+ L ++G+ K+ A + L+H ++ D
Sbjct: 719 EGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRD 752
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 414 LVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQQECAVA 473
LV L+ + + AL LS + + +Q + V+ L+ LL E + AVA
Sbjct: 566 LVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAK-AVKYLVELLDPDLEMVDK-AVA 623
Query: 474 LLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVES 533
LL LS E + AI GGIP LV+ ++ GS + KE++A++L LC +S V
Sbjct: 624 LLANLSAVG-EGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQ 682
Query: 534 ADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSD 567
A+P L+ L ++G+ K+ A + L+H ++ D
Sbjct: 683 EGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRD 716
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 452 GVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKE 511
V+ L+ L+ + ++ V L L + E K AI GGIP LV+++E GSA+ KE
Sbjct: 588 AVRYLVELMDPAFGMVEKAVVVLANLATVR--EGKIAIGEEGGIPVLVEVVELGSARGKE 645
Query: 512 DSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL 562
++ L LC HS V +P L+ L K+G+ GK+ A L +
Sbjct: 646 NATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYF 696
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 451 EGVQLLISLLGLSSEQQQECAVALLCLLSYE-NDESKWAITAAGGIPPLVQILETGS-AK 508
E + L+SLL + E+ Q A A+ CLL+ ND +K I +G I PL+ +L+TG +
Sbjct: 463 EAIPSLVSLLYSTDERIQ--ADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEE 520
Query: 509 AKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL-IHKSD 567
AK +SA L +L + E+ + + A A+ L+ LL +GS +GK AA L +L IH +
Sbjct: 521 AKANSAATLFSL-SVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHEN 579
Query: 568 TTTI 571
T +
Sbjct: 580 KTKV 583
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 408 SDAKHLLVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLISLLGLSSEQQ 467
S A LLV L+ + + AL +L + + A++ L+ ++ S+
Sbjct: 184 SGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMV 243
Query: 468 QECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDI 527
+ A + L+S ESK A+ GG+P LV+I+E G+ + KE S +IL LC S
Sbjct: 244 DKSAFVMNLLMSA--PESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEESVVY 301
Query: 528 RACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHK 565
R V AVP L+ L + + G + A+ L L+ +
Sbjct: 302 RTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQ 339
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 401 LSTKLKNSD--AKHLLVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLIS 458
LS + NSD ++L+ L + ++ E Q + + LSK++ L ++ L+S
Sbjct: 51 LSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVS 110
Query: 459 LLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILK 518
L+ S Q QE V + LS DE+K I ++G + PLV L G+ KE++A L
Sbjct: 111 LISSSDLQLQEYGVTAVLNLSL-CDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALL 169
Query: 519 NLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTT-------- 570
L + E+ + + + A+P L+ LL+NG K A+ L L ++ T
Sbjct: 170 RL-SQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIM 228
Query: 571 --ISQLTALLTSDLPDSKVYIFDALRSVLSVAP 601
+ +L SD+ D ++ + L S P
Sbjct: 229 KPLVELMIDFESDMVDKSAFVMNLLMSAPESKP 261
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 399 PVLSTKLKNSDAKHLLVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGVQLLIS 458
P KL + A LV LI+ + ++Q+ + A+L LS + + + V+ L++
Sbjct: 93 PENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDEN-KEMIVSSGAVKPLVN 151
Query: 459 LLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILK 518
L L + +E A L LS + +E+K I +G IP LV +LE G +AK+D++T L
Sbjct: 152 ALRLGTPTTKENAACALLRLS-QVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALY 210
Query: 519 NLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLI 563
+LC+ +E+ VES P L+ L+ + + D +A +N L+
Sbjct: 211 SLCSTNENKTRAVESGIMKP-LVELMIDFESDMVDKSAFVMNLLM 254
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 408 SDAKHLLVGLITMAANEVQDELIKALLTLSKSEGSLWHALQGREGV-QLLISLLG-LSSE 465
S A LLV L+ + + AL +L ++ + A+Q G+ + L+ L+ S
Sbjct: 186 SGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQS--GIMKPLVELMADFGSN 243
Query: 466 QQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSE 525
+ A + L+S ESK AI GG+P LV+I+E G+ + KE + +IL LC S
Sbjct: 244 MVDKSAFVMSLLMSV--PESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESV 301
Query: 526 DIRACVESADAVPALLWLLKNGSPNGKDIA 555
R V A+P L+ L + G+ K A
Sbjct: 302 VYRTMVAREGAIPPLVALSQAGTSRAKQKA 331
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 385 QERTIEALATL-YGNPVLSTKLKNSDAKHLLVGLITMAANEVQDELIKALLTLSKSEGSL 443
Q R+++ + L NP + N+ A LLV L++ + +Q+ + LL LS E +
Sbjct: 396 QRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDE--V 453
Query: 444 WHALQGREG-VQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQIL 502
L EG + +I +L + + +E + A L LS DE+K I + GIPPLV +L
Sbjct: 454 NKKLISNEGAIPNIIEILENGNREARENSAAALFSLSML-DENKVTIGLSNGIPPLVDLL 512
Query: 503 ETGSAKAKEDSATILKNL 520
+ G+ + K+D+ T L NL
Sbjct: 513 QHGTLRGKKDALTALFNL 530
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 448 QGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSA 507
+ ++ V LL+ L S ++Q +V + LL+ EN E++ I AG IP LVQ+L +
Sbjct: 376 EQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDS 435
Query: 508 KAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTL 559
+E++ T L NL + E + + + A+P ++ +L+NG+ ++ +A L
Sbjct: 436 GIQENAVTTLLNL-SIDEVNKKLISNEGAIPNIIEILENGNREARENSAAAL 486
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 450 REGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKA 509
R V L+ L + +QQ A L LL+ N +++ I AG IP LV++L + +
Sbjct: 344 RTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRT 403
Query: 510 KEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL 562
+E S T L NL + +E + + A A+ ++ +LKNGS ++ AA TL L
Sbjct: 404 QEHSVTALLNL-SINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSL 455
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 453 VQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKED 512
+Q LI LL + QE AV L LS +D++K I A G I LV +L+TG+ +K++
Sbjct: 227 IQALIPLLRCNDPWTQEHAVTALLNLSL-HDQNKAVIAAGGAIKSLVWVLKTGTETSKQN 285
Query: 513 SATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHL 562
+A L +L E+ + + + A+P L+ LL NGS GK A TL L
Sbjct: 286 AACALLSLALLEEN-KGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKL 334