Miyakogusa Predicted Gene
- Lj4g3v2800560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2800560.1 Non Chatacterized Hit- tr|C5Z509|C5Z509_SORBI
Putative uncharacterized protein Sb10g004910
OS=Sorghu,23.27,2e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat;
SUBFAM,CUFF.51655.1
(442 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 609 e-175
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 608 e-174
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 165 7e-41
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 9e-39
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 145 7e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 8e-34
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 8e-34
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 8e-34
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 140 1e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 136 3e-32
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 133 2e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 8e-31
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 126 2e-29
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 123 2e-28
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 6e-28
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 9e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 121 1e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 7e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 7e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 118 8e-27
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 117 2e-26
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 115 8e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 1e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 112 4e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 109 4e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 108 1e-23
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 104 1e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 9e-22
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 96 5e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 95 1e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 87 3e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 4e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 6e-17
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 7e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 3e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 75 7e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 8e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 5e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 72 6e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 70 2e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 70 3e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 70 4e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 69 5e-12
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 69 5e-12
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 69 5e-12
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 67 2e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 66 5e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 64 2e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 63 4e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 4e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 62 1e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 9e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 55 8e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 8e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 2e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 54 3e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 5e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 52 7e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 8e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 52 1e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 51 1e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 51 2e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 50 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 5e-06
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 49 5e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 49 7e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 49 8e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 609 bits (1571), Expect = e-175, Method: Compositional matrix adjust.
Identities = 284/418 (67%), Positives = 344/418 (82%)
Query: 25 RSAPPTRISFGSIPTRPKRKKTNDDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTE 84
R + TRI+ G+I +R K + + E R LVR L +ISD+EPL +TL+KYV++VR +
Sbjct: 39 RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98
Query: 85 HCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
HCFLLFEELGK DKWL CLEVFRWMQKQRWY+ DNGVYSKLISVMGKKGQTR+AMWLFSE
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M+N+GCRPD SVYN+LI+AHLH+RDK KAL K GY +KMKG+ERC+PN+VTYNI+LRAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
AQ+GKV+QVN+LFKDLD S VSPD+YT+NGVMDAYGK GMI+EMEA+LTRM+SN+CKPD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
ITFN+LIDSYGKKQ+F+KMEQ FKSL+RSKEKP+LPTFNSM++NYGKAR+ DKAE VFK+
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M +M Y PSF+T+E +I MYG+C VS+A+E+F+ + ES +K STLNAML+VYC N L
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
EAD LF A + +V PDASTYK LYKAYTKA+ GI+PNKRFF
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 608 bits (1569), Expect = e-174, Method: Compositional matrix adjust.
Identities = 284/418 (67%), Positives = 344/418 (82%)
Query: 25 RSAPPTRISFGSIPTRPKRKKTNDDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTE 84
R + TRI+ G+I +R K + + E R LVR L +ISD+EPL +TL+KYV++VR +
Sbjct: 39 RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98
Query: 85 HCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
HCFLLFEELGK DKWL CLEVFRWMQKQRWY+ DNGVYSKLISVMGKKGQTR+AMWLFSE
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M+N+GCRPD SVYN+LI+AHLH+RDK KAL K GY +KMKG+ERC+PN+VTYNI+LRAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
AQ+GKV+QVN+LFKDLD S VSPD+YT+NGVMDAYGK GMI+EMEA+LTRM+SN+CKPD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
ITFN+LIDSYGKKQ+F+KMEQ FKSL+RSKEKP+LPTFNSM++NYGKAR+ DKAE VFK+
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M +M Y PSF+T+E +I MYG+C VS+A+E+F+ + ES +K STLNAML+VYC N L
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
EAD LF A + +V PDASTYK LYKAYTKA+ GI+PNKRFF
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 166/322 (51%), Gaps = 5/322 (1%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
+WL LEVF +++Q +Y G Y KL+ ++GK GQ A LF EM G P +Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+L++A+ S + A +KMK +C+P++ TY+ +L+A A + + V+SL+
Sbjct: 163 TALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLY 218
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPDLITFNLLIDSYGK 276
K++DE +++P+ T N V+ YG+ G +ME +L+ M S CKPD+ T N+++ +G
Sbjct: 219 KEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGN 278
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
+ D ME ++ +P TFN ++ +YGK R+ DK +V + M ++ + + T
Sbjct: 279 MGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTST 338
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+ ++I + + FD + ++ T +++ Y L + S Q A
Sbjct: 339 YNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAA 398
Query: 397 SIKVLPDASTYKLLYKAYTKAN 418
++ + + Y + A KA+
Sbjct: 399 KFEIPENTAFYNAVISACAKAD 420
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 40/353 (11%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
+W ++VF +++Q WY + G+Y KLI ++GK Q A LF EM N GC + VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+L+SA+ ++ A E+MK C+P++ TY+I++++F Q ++V L
Sbjct: 189 TALVSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPD------------- 263
D+ + P+ TYN ++DAYGK M EME+ L +M + CKPD
Sbjct: 245 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 304
Query: 264 ----------------------LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ TFN+L+DSYGK + KM V + + + ++ T
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+N ++ +G+A + E +F+ M PS VT SL+ YG K + +
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 424
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
S +++ + N ++D Y E + + PD TY+ + KAY
Sbjct: 425 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
L S+MR G RP+T YN+LI A+ K K + +M G + CKP+ T N
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAY----GKAKMFVEMESTLIQMLGEDDCKPDSWTMNST 298
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
LRAF G++E + + ++ S + P+I T+N ++D+YGK G ++M A++ M+
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
++T+N++ID++G+ +ME +F+ + + PS T S+V YG+A DK
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 418
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
V + + V L+ YG + ++ K + + + + + T M+ Y
Sbjct: 419 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYR 478
Query: 381 INNLPQEADSLFQRARSI 398
I+ + L S+
Sbjct: 479 ISGMTTHVKELHGVVESV 496
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 182/368 (49%), Gaps = 9/368 (2%)
Query: 54 RELVRLLTRKISDKEPLERTLN--KYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQK 111
+EL R+L R + + +ER N KY+ L + +E K ++W L++F ++K
Sbjct: 79 KELSRIL-RTDAAVKGIERKANSEKYLTL-WPKAVLEALDEAIKENRWQSALKIFNLLRK 136
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
Q WY Y+KL V+G Q A LF M + G +P VY SLIS + K+
Sbjct: 137 QHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY----GKS 192
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ L KA E MK + CKP++ T+ +++ + G+ + V S+ ++ V T
Sbjct: 193 ELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVT 252
Query: 232 YNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
YN ++D YGK GM EME++L M + PD+ T N +I SYG + KME +
Sbjct: 253 YNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF 312
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV 350
+P + TFN ++L++GKA + K +V M + ++ + VT+ +I +G +
Sbjct: 313 QLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRI 372
Query: 351 SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
K ++F + V+ T ++++ Y L + DS+ ++ + V+ D + +
Sbjct: 373 EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCI 432
Query: 411 YKAYTKAN 418
AY +A
Sbjct: 433 INAYGQAG 440
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTG-CRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
Y+ +I GK G + ++M G PD NS+I ++ + R+ + K +
Sbjct: 253 YNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN----MRKMESW 308
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+ + + M +P+I T+NI++ +F +AG +++ S+ +++ S TYN V++ +G
Sbjct: 309 YSRFQLM-GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFG 367
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G I +M+ + +MK KP+ IT+ L+++Y K K++ V + ++ S P
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP 427
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
FN ++ YG+A + ++ QM E P +T ++I Y A +FD +
Sbjct: 428 FFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY-------TAHGIFDAV 480
Query: 361 VESKVQI 367
E + Q+
Sbjct: 481 QELEKQM 487
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 128/341 (37%), Gaps = 80/341 (23%)
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMER---------------------------- 189
NS + + H D K L++ L +KG+ER
Sbjct: 65 NSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRW 124
Query: 190 ---------------CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+P TY + + + +Q + LF+ + + P I Y
Sbjct: 125 QSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTS 184
Query: 235 VMDAYGKRGMIREMEAMLTRMKS-NQCKPDLITF-------------------------- 267
++ YGK ++ + + L MKS + CKPD+ TF
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 268 ---------NLLIDSYGKKQQFDKMEQVFKSLLRSKEK-PSLPTFNSMVLNYGKARLKDK 317
N +ID YGK F++ME V ++ + P + T NS++ +YG R K
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
E+ + + MG P T LI +G K + D + + + T N +++
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ ++ D +F++ + V P++ TY L AY+KA
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 173/384 (45%), Gaps = 43/384 (11%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGC 150
LG H K+ L F W KQ+ Y M DN V + +IS++GK+G+ A +F+ ++ G
Sbjct: 145 LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
D Y SLISA +S +A+ F+KM+ + CKP ++TYN+IL F + G
Sbjct: 205 SLDVYSYTSLISAFANS----GRYREAVNVFKKME-EDGCKPTLITYNVILNVFGKMGTP 259
Query: 211 -EQVNSLFKDLDESIVSPDIY-----------------------------------TYNG 234
++ SL + + ++PD Y TYN
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D YGK +E +L M N P ++T+N LI +Y + D+ ++ +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
KP + T+ +++ + +A + A ++F++M G P+ T + I MYG ++
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++FD + + + T N +L V+ N + E +F+ + +P+ T+ L AY
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
++ S G+ P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPD 523
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 67/361 (18%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL------ 174
Y+ L+S + G+ AM +F EMRN GC+P+ +N+ I + + T+ +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 175 -------------------------AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
++ G F++MK P T+N ++ A+++ G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGS 504
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
EQ ++++ + ++ V+PD+ TYN V+ A + GM + E +L M+ +CKP+ +T+
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 270 LIDSYGKKQQFDKM-----------------------------------EQVFKSLLRSK 294
L+ +Y ++ M E+ F L
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P + T NSMV YG+ ++ KA V M E G+ PS T+ SL+YM+ K++
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
E+ ++ ++ + + N ++ YC N ++A +F R+ ++PD TY +Y
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 415 T 415
Sbjct: 745 A 745
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 40/353 (11%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
Y+ LIS + G AM L ++M G +PD Y +L+S ++ + A+
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF----ERAGKVESAMSI 406
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE+M+ CKPNI T+N ++ + GK ++ +F +++ +SPDI T+N ++ +G
Sbjct: 407 FEEMRN-AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ GM E+ + MK P+ TFN LI +Y + F++ V++ +L + P L
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF-------------- 346
T+N+++ + + +++E V +M + P+ +T+ SL++ Y
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 347 ---------------------CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
CD + +A+ F L E ++TLN+M+ +Y +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+A+ + + P +TY L ++++ GI P+
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%), Gaps = 5/300 (1%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LI+ + + A +F EM+ G D YN+L+ + K+ +A
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY----GKSHRPKEA 333
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ +M + P+IVTYN ++ A+A+ G +++ L + E PD++TY ++
Sbjct: 334 MKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + G + ++ M++ CKP++ TFN I YG + +F +M ++F + P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+ T+N+++ +G+ + + VFK+M G+ P T +LI Y C +A ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++++ V +ST N +L + ++++ + + P+ TY L AY
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 6/314 (1%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VF+ M K+ ++ + ++ LIS + G AM ++ M + G PD S YN++++A
Sbjct: 476 VFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA- 533
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
L + K L E RCKPN +TY +L A+A ++ ++SL +++ +
Sbjct: 534 LARGGMWEQSEKVLAEMED----GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+ P ++ K ++ E E + +K PD+ T N ++ YG++Q K
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
V + PS+ T+NS++ + ++ K+E + +++ G P +++ ++IY Y
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
+ A +F + S + V T N + Y +++ +EA + + P+
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 405 STYKLLYKAYTKAN 418
+TY + Y K N
Sbjct: 770 NTYNSIVDGYCKLN 783
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 164/327 (50%), Gaps = 5/327 (1%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
L + D + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
+T YN LI HS + L +A+ F +M+ C+P+ VTY ++ A+AG ++
Sbjct: 393 NTVTYNRLI----HSYGRANYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+++ + E+ +SPD +TY+ +++ GK G + + M C P+L+TFN++I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+ K + ++ ++++ + + +P T++ ++ G ++AE VF +M + P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
+ L+ ++G V KA + + ++++ ++ V T N++L + + EA +L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 393 QRARSIKVLPDASTYKLLYKAYTKANS 419
Q ++ + P TY LL T A S
Sbjct: 628 QSMLALGLHPSLQTYTLLLSCCTDARS 654
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 41/351 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L G+ + + VF MQ + D Y LI + K G +AM ++ M+
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PDT Y+ +I+ K L A F +M G + C PN+VT+NI++ A+A
Sbjct: 459 GLSPDTFTYSVIINC----LGKAGHLPAAHRLFCEMVG-QGCTPNLVTFNIMIALHAKAR 513
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
E L++D+ + PD TY+ VM+ G G + E E + M+ PD +
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYG 573
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LL+D +GK DK Q ++++L++ +P++PT NS++ + + +A N+ + M +
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
Query: 329 GYAPSFVTHESLI---------YMYGFCDCV--------------------------SKA 353
G PS T+ L+ + GFC +
Sbjct: 634 GLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHV 693
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
D + + K ++A++D + L +EA S+++ A V PDA
Sbjct: 694 SNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDA 744
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%)
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
A ALG+F +K K + TY ++ +A + ++N L ++ P+ TYN
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNR 399
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ +YG+ ++E + +M+ C+PD +T+ LID + K D +++ + +
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P T++ ++ GKA A +F +M G P+ VT +I ++ A
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+L+ + + Q T + +++V +EA+ +F + +PD Y LL +
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
KA + G+ PN
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPN 603
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 180/390 (46%), Gaps = 9/390 (2%)
Query: 57 VRLLTRKISDKEP---LERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQR 113
V L K+S P + R L+ + + L+F+E W L +F++MQ+Q
Sbjct: 76 VESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI 135
Query: 114 WYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA 173
W + +Y+ +IS++G++G + +F EM + G Y +LI+A+ +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY----GRNGR 191
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG-KVEQVNSLFKDLDESIVSPDIYTY 232
+L ++MK E+ P+I+TYN ++ A A+ G E + LF ++ + PDI TY
Sbjct: 192 YETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
N ++ A RG+ E E + M PDL T++ L++++GK ++ +K+ + +
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
P + ++N ++ Y K+ +A VF QM G P+ T+ L+ ++G
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
++LF + S +T N +++V+ +E +LF + PD TY+ +
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 413 AYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
A K I+P+ + +
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 6/313 (1%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VFR M + D YS L+ GK + L EM + G PD + YN L+ A+
Sbjct: 269 VFRTMNDGG-IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
K+ ++ +A+G F +M+ C PN TY+++L F Q+G+ + V LF ++ S
Sbjct: 328 A----KSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
PD TYN +++ +G+ G +E+ + M +PD+ T+ +I + GK +
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
++ + + + PS + ++ +G+A L ++A F M E+G PS T SL+Y +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
V +++ + LV+S + T NA ++ Y +EA + + PD
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 405 STYKLLYKAYTKA 417
T + + Y+ A
Sbjct: 563 RTLEAVLSVYSFA 575
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKALG 179
Y+ L+ K G + AM +F +M+ GC P+ + Y+ L++ S D + L
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL----- 374
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
F +MK P+ TYNI++ F + G ++V +LF D+ E + PD+ TY G++ A
Sbjct: 375 -FLEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
GK G+ + +L M +N P + +I+++G+ +++ F ++ PS+
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
TF+S++ ++ + L ++E + ++ + G + T + I Y +A + +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ +S+ TL A+L VY L E F+ ++ +LP Y ++ Y K
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA----HLHSRDKTKA 173
D Y+ LI V G+ G + + LF +M PD Y +I A LH +
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR--- 442
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
K L Y P+ Y ++ AF QA E+ F + E +P I T++
Sbjct: 443 --KILQYMTA----NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
++ ++ + G+++E EA+L+R+ + + TFN I++Y + +F++ + + + +S
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
+ P T +++ Y ARL D+ F++M PS + + ++ +YG +
Sbjct: 557 RCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDV 616
Query: 354 KELFDGLVESKV 365
EL + ++ ++V
Sbjct: 617 NELLEEMLSNRV 628
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 9/299 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +++VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC----KHGSLDNAFNLF 286
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+M+ M+ NI+TYNI++ F AG+ + L +D+ + ++P++ T++ ++D++ K
Sbjct: 287 NEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G +RE E + M PD IT+ LID + K+ DK Q+ ++ P++ T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
FN ++ Y KA D +F++M+ G VT+ +LI GFC+ ++ AKELF
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI--QGFCELGKLNVAKELFQE 463
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+V KV + T +LD C N ++A +F++ K+ D Y ++ A+
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 9/304 (2%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y + +S LI+ + +G+ A+ L M G +PD N+L++ S +
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE---- 209
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
A+A+ +KM C+PN VTY +L ++G+ L + ++E + D Y+
Sbjct: 210 AEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D K G + + M+ ++IT+N+LI + ++D ++ + +++ K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSK 352
P++ TF+ ++ ++ K +AE + K+M G AP +T+ SLI GFC + + K
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI--DGFCKENHLDK 386
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A ++ D +V + T N +++ YC N + LF++ V+ D TY L +
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 413 AYTK 416
+ +
Sbjct: 447 GFCE 450
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 40/292 (13%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+S LI K+G+ R A L EM + G PDT Y SLI K L KA
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC----KENHLDKANQMV 391
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ M + C PNI T+NI++ + +A +++ LF+ + V D TYN ++ + +
Sbjct: 392 DLMVS-KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE------ 295
G + + + M S + P+++T+ +L+D + +K ++F+ + +SK
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 296 -----------------------------KPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
KP + T+N M+ K +AE +F++M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
E G+AP T+ LI + +K+ +L + L + ST+ ++D+
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 622
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 13/325 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+S+L S + K Q L + L +M G + + +I+ R A + A+G
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS-AMGKI 149
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E PN +T++ ++ G+V + L + E PD+ T N +++
Sbjct: 150 IKL-GYE---PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 242 RGMIREMEAMLT--RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G +E EAML +M C+P+ +T+ +++ K Q ++ + + K
Sbjct: 206 SG--KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV--SKAKELF 357
++ ++ K D A N+F +M G + +T+ LI GFC+ +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG--GFCNAGRWDDGAKLL 321
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+++ K+ V T + ++D + +EA+ L + + PD TY L + K
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 418 NSXXXXXXXXXXXXXXGIIPNKRFF 442
N G PN R F
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTF 406
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
LE+FR M R +AD Y+ LI + G+ +A LF EM + P+ Y L+
Sbjct: 423 LELFRKMS-LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ + KAL FEK++ + + +I YNII+ A KV+ LF L
Sbjct: 482 GLCDNGESEKALE----IFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
V P + TYN ++ K+G + E E + +M+ + PD T+N+LI ++ K
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ + L R T ++ RLK
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSDGRLK 629
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 5/317 (1%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L F W+++Q + D Y+ ++ +G+ Q L EM GC+P+T YN LI
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI- 406
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
HS + L +A+ F +M+ CKP+ VTY ++ A+AG ++ +++ +
Sbjct: 407 ---HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+SPD +TY+ +++ GK G + + M C P+L+T+N+++D + K + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++++ + + +P T++ ++ G ++AE VF +M + + P + L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
++G V KA + + ++ + ++ V T N++L + N EA L Q ++ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 403 DASTYKLLYKAYTKANS 419
TY LL T S
Sbjct: 643 SLQTYTLLLSCCTDGRS 659
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 41/351 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L G+ + + VF MQ + D Y LI + K G +AM ++ M+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PDT Y+ +I+ K L A F +M + C PN+VTYNI++ A+A
Sbjct: 464 GLSPDTFTYSVIINC----LGKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKAR 518
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ L++D+ + PD TY+ VM+ G G + E EA+ T M+ PD +
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LL+D +GK +K Q ++++L + +P++PT NS++ + + +A + + M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 329 GYAPSFVTHESLIYM---------YGFC--------------------------DCVSKA 353
G PS T+ L+ GFC + + A
Sbjct: 639 GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHA 698
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
D + + K ++A++D + +EA S+++ A V PDA
Sbjct: 699 NNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDA 749
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 7/294 (2%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
++N G R D N ++ + ALG+F +K K + TY ++
Sbjct: 322 LQNLGLRIDAYQANQVLK-------QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+A + +N L ++ P+ TYN ++ +YG+ + E + +M+ CKPD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+ LID + K D +++ + P T++ ++ GKA A +F +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + G P+ VT+ ++ ++ A +L+ + + + T + +++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+EA+++F + +PD Y LL + KA + G+ PN
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 5/317 (1%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L F W+++Q + D Y+ ++ +G+ Q L EM GC+P+T YN LI
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI- 406
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
HS + L +A+ F +M+ CKP+ VTY ++ A+AG ++ +++ +
Sbjct: 407 ---HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+SPD +TY+ +++ GK G + + M C P+L+T+N+++D + K + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++++ + + +P T++ ++ G ++AE VF +M + + P + L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
++G V KA + + ++ + ++ V T N++L + N EA L Q ++ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 403 DASTYKLLYKAYTKANS 419
TY LL T S
Sbjct: 643 SLQTYTLLLSCCTDGRS 659
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 41/351 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L G+ + + VF MQ + D Y LI + K G +AM ++ M+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PDT Y+ +I+ K L A F +M + C PN+VTYNI++ A+A
Sbjct: 464 GLSPDTFTYSVIINC----LGKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKAR 518
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ L++D+ + PD TY+ VM+ G G + E EA+ T M+ PD +
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LL+D +GK +K Q ++++L + +P++PT NS++ + + +A + + M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 329 GYAPSFVTHESLIYM---------YGFC--------------------------DCVSKA 353
G PS T+ L+ GFC + + A
Sbjct: 639 GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHA 698
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
D + + K ++A++D + +EA S+++ A V PDA
Sbjct: 699 NNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDA 749
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 7/294 (2%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
++N G R D N ++ + ALG+F +K K + TY ++
Sbjct: 322 LQNLGLRIDAYQANQVLK-------QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+A + +N L ++ P+ TYN ++ +YG+ + E + +M+ CKPD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+ LID + K D +++ + P T++ ++ GKA A +F +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + G P+ VT+ ++ ++ A +L+ + + + T + +++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+EA+++F + +PD Y LL + KA + G+ PN
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 5/317 (1%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L F W+++Q + D Y+ ++ +G+ Q L EM GC+P+T YN LI
Sbjct: 348 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI- 406
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
HS + L +A+ F +M+ CKP+ VTY ++ A+AG ++ +++ +
Sbjct: 407 ---HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+SPD +TY+ +++ GK G + + M C P+L+T+N+++D + K + +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++++ + + +P T++ ++ G ++AE VF +M + + P + L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
++G V KA + + ++ + ++ V T N++L + N EA L Q ++ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 403 DASTYKLLYKAYTKANS 419
TY LL T S
Sbjct: 643 SLQTYTLLLSCCTDGRS 659
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 41/351 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L G+ + + VF MQ + D Y LI + K G +AM ++ M+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PDT Y+ +I+ K L A F +M + C PN+VTYNI++ A+A
Sbjct: 464 GLSPDTFTYSVIINC----LGKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKAR 518
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ L++D+ + PD TY+ VM+ G G + E EA+ T M+ PD +
Sbjct: 519 NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LL+D +GK +K Q ++++L + +P++PT NS++ + + +A + + M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 329 GYAPSFVTHESLIYM---------YGFC--------------------------DCVSKA 353
G PS T+ L+ GFC + + A
Sbjct: 639 GLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHA 698
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
D + + K ++A++D + +EA S+++ A V PDA
Sbjct: 699 NNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDA 749
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 7/294 (2%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
++N G R D N ++ + ALG+F +K K + TY ++
Sbjct: 322 LQNLGLRIDAYQANQVLK-------QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNL 374
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+A + +N L ++ P+ TYN ++ +YG+ + E + +M+ CKPD
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+ LID + K D +++ + P T++ ++ GKA A +F +
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + G P+ VT+ ++ ++ A +L+ + + + T + +++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+EA+++F + +PD Y LL + KA + G+ PN
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 38/417 (9%)
Query: 37 IPTRPKRKKTND---DDSETRELV-RLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEE 92
IP R + + ND D E+V RL+ ++ E ++ LN +V ++ +L E
Sbjct: 59 IPRRYRIRVENDRFQKDWSVSEVVDRLMA--LNRWEEVDGVLNSWVGRFARKNFPVLIRE 116
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
L + C+ VF+WM+ Q+ Y A N +Y+ +I + + A LF EM+ C+P
Sbjct: 117 LSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKP 176
Query: 153 DTSVYNSLISAHLH---------------------SRDKTKALAKALGYFEKMK-GMERC 190
D Y++LI+AH SR L A G + +E C
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 191 K--------PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
K P++VT+NI+L A+ + + S F+ + + V PD T+N ++ K
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 243 GMIREMEAMLTRM--KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G + + M K +C+PD++TF ++ Y K + + VF++++ KP++
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 356
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
++N+++ Y + A +V + + G P V++ L+ YG KAKE+F +
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ + + V T NA++D Y N EA +F++ + P+ + L A +++
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 7/301 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRN--TGCRPDTSVYNSLISAHLHSRDKTKALA 175
D ++ +I + K GQ+ A+ LF+ MR CRPD + S++ HL+S
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 339
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+A+ FE M E KPNIV+YN ++ A+A G S+ D+ ++ + PD+ +Y +
Sbjct: 340 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+++YG+ + + + M+ + KP+++T+N LID+YG + ++F+ + +
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
KP++ + +++ +++ K + V G + + S I Y + KA
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
L+ + + KV+ T ++ C + EA S + + + Y + AY+
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYS 576
Query: 416 K 416
K
Sbjct: 577 K 577
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 134/298 (44%), Gaps = 9/298 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ G + A+ + +++ G PD Y L++++ SR KA L
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL--- 414
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M ER KPN+VTYN ++ A+ G + + +F+ +++ + P++ + ++ A +
Sbjct: 415 --MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
++ +L+ +S + +N I SY + +K +++S+ + K K T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 302 FNSMVLNYGKARLKDKAENV--FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
F +L G R+ E + K+M ++ + + S++ Y V++A+ +F+
Sbjct: 533 FT--ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ + + V +ML Y + +A LF + + PD+ L +A+ K
Sbjct: 591 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 648
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 112/263 (42%), Gaps = 11/263 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
+ Y+ I + A+ L+ MR + D+ + LIS + +A
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC----RMSKYPEA 549
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ Y ++M+ + V Y+ +L A+++ G+V + S+F + + PD+ Y ++
Sbjct: 550 ISYLKEMEDLSIPLTKEV-YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
AY + + M++N +PD I + L+ ++ K Q + V L+R KE P
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIP 667
Query: 298 -SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTH--ESLIYMYGFCDCVSKAK 354
+ F + + +A ++ + M Y PS +++++G V
Sbjct: 668 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDP--YLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 355 ELFDGLVESKVQIKVSTLNAMLD 377
+LF ++ S V I + T +L+
Sbjct: 726 KLFYKIIASGVGINLKTYAILLE 748
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 9/299 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y ++ VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC----KDGSLDNAFNLF 270
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+M+ ++ K +I+ Y ++R F AG+ + L +D+ + ++PD+ ++ ++D + K
Sbjct: 271 NEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G +RE E + M PD +T+ LID + K+ Q DK + ++ P++ T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
FN ++ Y KA L D +F++M+ G VT+ +LI GFC+ + AKELF
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI--QGFCELGKLEVAKELFQE 447
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+V +V+ + + +LD C N P++A +F++ K+ D Y ++ A+
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 142/306 (46%), Gaps = 13/306 (4%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D +S LI+ + +G+ A+ L M G +P N+L++ + +
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN----GKV 193
Query: 175 AKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+ A+ ++M G + PN VTY +L+ ++G+ L + ++E + D Y
Sbjct: 194 SDAVLLIDRMVETGFQ---PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++D K G + + M+ K D+I + LI + ++D ++ + +++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCV 350
K P + F++++ + K +AE + K+M + G +P VT+ SLI GFC + +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI--DGFCKENQL 368
Query: 351 SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
KA + D +V + T N +++ YC NL + LF++ V+ D TY L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 411 YKAYTK 416
+ + +
Sbjct: 429 IQGFCE 434
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y+ LI K+ Q A + M + GC P+ +N LI+ + K
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC----KA 400
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ L F KM + + VTYN +++ F + GK+E LF+++ V PDI +
Sbjct: 401 NLIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
Y ++D G + + +++ ++ + D+ +N++I + D +F SL
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVS 351
KP + T+N M+ K +A+ +F++M E G++P+ T+ LI + +
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDV 378
K+ +L + + + ST+ ++D+
Sbjct: 580 KSAKLIEEIKRCGFSVDASTVKMVVDM 606
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
LE+FR M R +AD Y+ LI + G+ +A LF EM + RPD Y L+
Sbjct: 407 LELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ + KAL FEK++ + + +I YNII+ A KV+ LF L
Sbjct: 466 GLCDNGEPEKALE----IFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
V PD+ TYN ++ K+G + E + + +M+ + P+ T+N+LI ++ + K
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ + + R T +V RLK
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLK 613
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 131/321 (40%), Gaps = 5/321 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+S+L SV+ + Q L + L +M G + + +I+ R + A + A+G
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS-AMGKI 133
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+ VT++ ++ G+V + L + E P + T N +++
Sbjct: 134 IKL-GYE---PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + ++ RM +P+ +T+ ++ K Q ++ + + K K
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
++ ++ K D A N+F +M G+ + + +LI + + +L ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXX 421
+ K+ V +A++D + +EA+ L + + PD TY L + K N
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 422 XXXXXXXXXXXXGIIPNKRFF 442
G PN R F
Sbjct: 370 KANHMLDLMVSKGCGPNIRTF 390
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 121 VYSKLI-SVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
VY+ I +M +KG T A+ +F M+ C+P T YN +I +L+ + ++ L
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI--NLYGKASKSYMSWKL- 308
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+ +M+ +CKPNI TY ++ AFA+ G E+ +F+ L E + PD+Y YN +M++Y
Sbjct: 309 -YCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G + + M+ C+PD ++N+++D+YG+ E VF+ + R P++
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+ ++ Y KAR K E + K+M+E G P S++ +YG +K +++
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ +ST N ++++Y + + LF + PD T+ AY++
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 42/359 (11%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLF--------------- 142
KW + V W+ ++ + D ++ LI G+K Q + A L+
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215
Query: 143 --------------------SEMRNTGCRPDT---SVYNSLISAHLHSRDKTKALAKALG 179
EM+N P T +VYN+ I + + T+ +A+
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTE---EAID 272
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
F++MK +RCKP TYN+++ + +A K L+ ++ P+I TY +++A+
Sbjct: 273 VFQRMK-RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G+ + E + +++ + +PD+ +N L++SY + ++F + +P
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
++N MV YG+A L AE VF++M +G AP+ +H L+ Y V+K + +
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ E+ V+ LN+ML++Y + + + + D STY +L Y KA
Sbjct: 452 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 131/238 (55%), Gaps = 6/238 (2%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+F +Q+ D VY+ L+ + G A +FS M++ GC PD + YN ++ A
Sbjct: 342 EIFEQLQEDG-LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
+ R + A+A+ FE+MK + P + ++ ++L A+++A V + ++ K++ E+
Sbjct: 401 Y--GRAGLHSDAEAV--FEEMKRL-GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
V PD + N +++ YG+ G +ME +L M++ C D+ T+N+LI+ YGK +++
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
E++F L +P + T+ S + Y + +L K VF++M + G AP T + L+
Sbjct: 516 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 573
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 128/255 (50%), Gaps = 5/255 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L++ ++G A +F +++ G PD VYN+L+ ++ SR A + F
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY--SRAGYPYGAAEI--F 379
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ M C+P+ +YNI++ A+ +AG ++F+++ ++P + ++ ++ AY K
Sbjct: 380 SLMQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + EA++ M N +PD N +++ YG+ QF KME++ + + T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+N ++ YGKA ++ E +F ++ E + P VT S I Y K E+F+ ++
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 362 ESKVQIKVSTLNAML 376
+S T +L
Sbjct: 559 DSGCAPDGGTAKVLL 573
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+F MQ D Y+ ++ G+ G A +F EM+ G P + L+SA
Sbjct: 377 EIFSLMQHMGC-EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 164 HLHSRDKTKA------------------------LAKALGYFEKMKG----MER--CKPN 193
+ +RD TK L LG F KM+ ME C +
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
I TYNI++ + +AG +E++ LF +L E PD+ T+ + AY ++ + + +
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
M + C PD T +L+ + ++Q +++ V +++ + SL
Sbjct: 556 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSL 601
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 164/322 (50%), Gaps = 16/322 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L++FR M+ +R A YS +I + K G A+ LF+EM G + D Y+SLI
Sbjct: 230 LDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 163 AHLHS---RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
+ D K L + +G P++VT++ ++ F + GK+ + L+ +
Sbjct: 289 GLCNDGKWDDGAKMLREMIG--------RNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ ++PD TYN ++D + K + E M M S C+PD++T+++LI+SY K ++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
D ++F+ + P+ T+N++VL + ++ + A+ +F++M G PS VT+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG- 459
Query: 340 LIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
I + G CD ++KA E+F+ + +S++ + + N ++ C + +A SLF
Sbjct: 460 -ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 398 IKVLPDASTYKLLYKAYTKANS 419
V PD TY ++ K S
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGS 540
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 149/306 (48%), Gaps = 9/306 (2%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
+ D Y +++ + K G + LA+ LF +M + Y+ +I S K +
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID----SLCKDGSF 261
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
AL F +M+ M+ K ++VTY+ ++ GK + + +++ + PD+ T++
Sbjct: 262 DDALSLFNEME-MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D + K G + E + + M + PD IT+N LID + K+ + Q+F ++
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSK 352
+P + T++ ++ +Y KA+ D +F++++ G P+ +T+ +L+ GFC ++
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV--LGFCQSGKLNA 438
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
AKELF +V V V T +LD C N +A +F++ + ++ Y ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 413 AYTKAN 418
A+
Sbjct: 499 GMCNAS 504
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 143/326 (43%), Gaps = 41/326 (12%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L KW ++ R M R + D +S LI V K+G+ A L++EM
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PDT YNSLI K L +A F+ M + C+P+IVTY+I++ ++ +A
Sbjct: 345 GIAPDTITYNSLIDGFC----KENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAK 399
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+V+ LF+++ + P+ TYN ++ + + G + + + M S P ++T+
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+L+D + +K ++F+ + +S+ + +N ++ A D A ++F +++
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
G P VT+ N M+ C EA
Sbjct: 520 GVKPDVVTY-----------------------------------NVMIGGLCKKGSLSEA 544
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAY 414
D LF++ + PD TY +L +A+
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 7/315 (2%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGYFEK 183
+I+ +K + A + G PDT +++L++ L R +++A+ ++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR-----VSEAVALVDR 165
Query: 184 MKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG 243
M M++ +P++VT + ++ G+V + L + E PD TY V++ K G
Sbjct: 166 MVEMKQ-RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
+ +M+ K ++ ++++IDS K FD +F + K + T++
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
S++ D + ++M P VT +LI ++ + +AKEL++ ++
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXX 423
+ T N+++D +C N EA+ +F S PD TY +L +Y KA
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 424 XXXXXXXXXXGIIPN 438
G+IPN
Sbjct: 405 MRLFREISSKGLIPN 419
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L + L + + LE+F MQK R + G+Y+ +I M + A LF + +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
G +PD YN +I K +L++A F KMK + C P+ TYNI++RA
Sbjct: 519 KGVKPDVVTYNVMIGGLC----KKGSLSEADMLFRKMKE-DGCTPDDFTYNILIRAHLGG 573
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+ L +++ S D T V+D R + + ML+
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 157 YNSLISAHLHSRDKTK------ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
Y+S+ A L +++ + + A+ FE M R P + +N + A A+ +
Sbjct: 28 YSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQY 86
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
+ V K ++ + + D+YT +++ Y ++ + ++L R +PD ITF+ L
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
++ + + + + + ++ K++P L T ++++ +A + +M E G+
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
P VT+ ++ + A +LF + E ++ V + ++D C + +A S
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 391 LFQRARSIKVLPDASTYKLL 410
LF + D TY L
Sbjct: 267 LFNEMEMKGIKADVVTYSSL 286
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 121 VYSKLI-SVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
VY+ I +M +KG T A+ +F M+ C+P T YN +I +L+ + ++ L
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI--NLYGKASKSYMSWKL- 286
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+ +M+ +CKPNI TY ++ AFA+ G E+ +F+ L E + PD+Y YN +M++Y
Sbjct: 287 -YCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G + + M+ C+PD ++N+++D+YG+ E VF+ + R P++
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+ ++ Y KAR K E + K+M+E G P S++ +YG +K +++
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ +ST N ++++Y + + LF + PD T+ AY++
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 42/359 (11%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLF--------------- 142
KW + V W+ ++ + D ++ LI G+K Q + A L+
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 193
Query: 143 --------------------SEMRNTGCRPDT---SVYNSLISAHLHSRDKTKALAKALG 179
EM+N P T +VYN+ I + + T+ +A+
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTE---EAID 250
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
F++MK +RCKP TYN+++ + +A K L+ ++ P+I TY +++A+
Sbjct: 251 VFQRMK-RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G+ + E + +++ + +PD+ +N L++SY + ++F + +P
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
++N MV YG+A L AE VF++M +G AP+ +H L+ Y V+K + +
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ E+ V+ LN+ML++Y + + + + D STY +L Y KA
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 131/238 (55%), Gaps = 6/238 (2%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+F +Q+ D VY+ L+ + G A +FS M++ GC PD + YN ++ A
Sbjct: 320 EIFEQLQEDG-LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
+ R + A+A+ FE+MK + P + ++ ++L A+++A V + ++ K++ E+
Sbjct: 379 Y--GRAGLHSDAEAV--FEEMKRL-GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 433
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
V PD + N +++ YG+ G +ME +L M++ C D+ T+N+LI+ YGK +++
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
E++F L +P + T+ S + Y + +L K VF++M + G AP T + L+
Sbjct: 494 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 128/255 (50%), Gaps = 5/255 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L++ ++G A +F +++ G PD VYN+L+ ++ SR A + F
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY--SRAGYPYGAAEI--F 357
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ M C+P+ +YNI++ A+ +AG ++F+++ ++P + ++ ++ AY K
Sbjct: 358 SLMQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + EA++ M N +PD N +++ YG+ QF KME++ + + T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+N ++ YGKA ++ E +F ++ E + P VT S I Y K E+F+ ++
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 362 ESKVQIKVSTLNAML 376
+S T +L
Sbjct: 537 DSGCAPDGGTAKVLL 551
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+F MQ D Y+ ++ G+ G A +F EM+ G P + L+SA
Sbjct: 355 EIFSLMQHMGC-EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 164 HLHSRDKTKA------------------------LAKALGYFEKMKG----MER--CKPN 193
+ +RD TK L LG F KM+ ME C +
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
I TYNI++ + +AG +E++ LF +L E PD+ T+ + AY ++ + + +
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
M + C PD T +L+ + ++Q +++ V +++ + SL
Sbjct: 534 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSL 579
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L++ R M+ +R AD YS +I + + G A+ LF EM G + YNSL+
Sbjct: 213 LDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV- 270
Query: 163 AHLHSRDKTKALAKALGYFEK---MKGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+ L KA + + +K M PN++T+N++L F + GK+++ N L+
Sbjct: 271 ---------RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
K++ +SP+I TYN +MD Y + + E ML M N+C PD++TF LI Y
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 278 QQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTH 337
++ D +VF+++ + + T++ +V + ++ AE +F++M G P +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 338 ESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
I + G CD + KA E+F+ L +SK+ + + +++ C ++A +LF
Sbjct: 442 G--ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 396 RSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
V P+ TY ++ K S G PN
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 155/359 (43%), Gaps = 40/359 (11%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D ++ LI + +G+ A+ L M GC+PD YNS+++ S D + AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 175 A-------------------------------KALGYFEKM--KGMERCKPNIVTYNIIL 201
A+ F++M KG+ K ++VTYN ++
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI---KSSVVTYNSLV 270
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
R +AGK L KD+ + P++ T+N ++D + K G ++E + M +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
P++IT+N L+D Y + + + + ++R+K P + TF S++ Y + D V
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
F+ +++ G + VT+ I + GFC + A+ELF +V V V T +LD
Sbjct: 391 FRNISKRGLVANAVTYS--ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
C N ++A +F+ + K+ Y + + K G+ PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 5/293 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+S+ S + + Q L + ++ G + N +I+ KT LG
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC-KTCFAYSVLGKV 149
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+ T+N +++ GKV + L + E+ PD+ TYN +++ +
Sbjct: 150 MKL-GYE---PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G +L +M+ K D+ T++ +IDS + D +FK + K S+ T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+NS+V KA + + K M P+ +T L+ ++ + +A EL+ ++
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ + T N ++D YC+ N EA+++ K PD T+ L K Y
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 140/299 (46%), Gaps = 11/299 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGY 180
++ L+ V K+G+ + A L+ EM G P+ YN+L+ + + +R L++A
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR-----LSEANNM 355
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+ M +C P+IVT+ +++ + +V+ +F+++ + + + TY+ ++ +
Sbjct: 356 LDLMV-RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ G I+ E + M S+ PD++T+ +L+D + +K ++F+ L +SK +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFD 358
+ +++ K + A N+F + G P+ +T+ +I G C +S+A L
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI--SGLCKKGSLSEANILLR 532
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ E T N ++ + + + L + +S DAS+ K++ A
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 9/212 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++VFR + K R +A+ YS L+ + G+ +LA LF EM + G PD Y L+
Sbjct: 388 MKVFRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
D K L KAL FE ++ + IV Y I+ + GKVE +LF L
Sbjct: 447 GLC---DNGK-LEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY---GKKQQ 279
V P++ TY ++ K+G + E +L +M+ + P+ T+N LI ++ G
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
K+ + KS S + S+ M+L+ K
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 48/339 (14%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKTKA 173
AD +YS +I + K A+ LF+EM N G RPD Y+SLIS + D ++
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L+ L + PN+VT+N ++ AFA+ GK+ + LF ++ + + P+I TYN
Sbjct: 298 LSDMLE--------RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK-KQQFDKMEQVFKSLLR 292
+++ + + E + + T M S C PD++T+N LI+ + K K+ D ME +F+ + R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME-LFRDMSR 408
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL------------ 340
+ T+ +++ + +A D A+ VFKQM G P+ +T+ +L
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 341 ----------------IYMY-----GFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLD 377
IY Y G C V +LF L V+ V N M+
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+C L +EA +LF + + LPD+ TY L +A+ +
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 153/300 (51%), Gaps = 11/300 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +I+ + K+G+ LA+ L ++M D +Y+++I S K + + AL F
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID----SLCKYRHVDDALNLF 263
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+M KG+ +P++ TY+ ++ G+ + L D+ E ++P++ T+N ++DA+
Sbjct: 264 TEMDNKGI---RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
K G + E E + M P+++T+N LI+ + + D+ +Q+F ++ P +
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY-MYGFCDCVSKAKELFD 358
T+N+++ + KA+ +F+ M+ G + VT+ +LI+ + DC A+ +F
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC-DNAQMVFK 439
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+V V + T N +LD C N ++A +F+ + K+ PD TY ++ + KA
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 141/303 (46%), Gaps = 9/303 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ L +M G +PDT + +L+ ++A+A E+M ++ C+P++VTY
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA----LVERMV-VKGCQPDLVTY 208
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++ + G+ + +L +++ + D+ Y+ V+D+ K + + + T M +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+PD+ T++ LI ++ ++ +L K P++ TFNS++ + K +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAM 375
AE +F +M + P+ VT+ SLI GFC D + +A+++F +V V T N +
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLI--NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGI 435
++ +C + LF+ ++ + TY L + +A+ G+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 436 IPN 438
PN
Sbjct: 447 HPN 449
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 11/292 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGY 180
++ LI K+G+ A LF EM P+ YNSLI+ +H R L +A
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR-----LDEAQQI 367
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F M + C P++VTYN ++ F +A KV LF+D+ + + TY ++ +
Sbjct: 368 FTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ + + +M S+ P+++T+N L+D K + +K VF+ L +SK +P +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFD 358
T+N M KA + ++F ++ G P + + ++I GFC +A LF
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI--SGFCKKGLKEEAYTLFI 544
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ E T N ++ + + + L + RS + DASTY L+
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 41/357 (11%)
Query: 96 HDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTS 155
H K +++F M K R + + +SKL+S + K + L + +M G +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 156 VYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNS 215
YN +I+ L R + L+ AL KM + P+IVT N +L F ++ + +
Sbjct: 102 TYNIMINC-LCRRSQ---LSFALAILGKMMKLGY-GPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
L + E PD T+ ++ + E A++ RM C+PDL+T+ +I+
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
K+ + D + + + K + + +++++ + K R D A N+F +M G P
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 336 THESLIYM---YG--------------------------FCDCVSK------AKELFDGL 360
T+ SLI YG D +K A++LFD +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++ + + T N++++ +C+++ EA +F S LPD TY L + KA
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L K K + +E+FR M + R + + Y+ LI + A +F +M +
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G P+ YN+L+ K L KA+ FE ++ + +P+I TYNI+ +AG
Sbjct: 445 GVHPNIMTYNTLLDGLC----KNGKLEKAMVVFEYLQK-SKMEPDIYTYNIMSEGMCKAG 499
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
KVE LF L V PD+ YN ++ + K+G+ E + +MK + PD T+N
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 269 LLIDSY 274
LI ++
Sbjct: 560 TLIRAH 565
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 190/404 (47%), Gaps = 44/404 (10%)
Query: 54 RELVRLLTRKI----SDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWM 109
RE V+ LT KI S++ + + V++ T++CF++ + +G+ + W LEVF W+
Sbjct: 124 RERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVV-KSVGQ-ESWQRALEVFEWL 181
Query: 110 QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE------------------------- 144
+ W+ + + + ++ V+G+ Q LA+ +F+
Sbjct: 182 NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKF 241
Query: 145 ---------MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIV 195
MR GC PD +N+LI+A L S T LA L + G+ +P+ +
Sbjct: 242 SKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL---RPDAI 298
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TYN +L A ++ ++ +F+D++ PD++TYN ++ YG+ G+ E E + +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+ PD +T+N L+ ++ +++ +K+++V++ + + T+N+++ YGK
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 316 DKAENVFKQMTEM-GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNA 374
D A ++K M + G P +T+ LI G + +A L +++ ++ + T +A
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
++ Y +EA+ F PD Y ++ + N
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 164/349 (46%), Gaps = 36/349 (10%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
+V + + ++ A + +Y+ +I GK+ + A + +R +G PD +NSL+SA
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 164 HLHS--------------RDKTKALAKAL----------GYFEKM---------KGMERC 190
+ RD +++ G E++ G +
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
K +I+ ++L AFA+AG + +V ++ + + P I Y +++ K +R+ E
Sbjct: 857 KSSIL---LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEI 913
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
M++ M+ K +L +N ++ Y + + K QV++ + + +P T+N++++ Y
Sbjct: 914 MVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
+ R ++ + +QM +G P T++SLI +G C+ +A++LF+ L+ +++ S
Sbjct: 974 RDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+ M+ + + +A+ L Q ++ + P +T LL +Y+ + +
Sbjct: 1034 FYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGN 1082
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 134/323 (41%), Gaps = 38/323 (11%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++VF M+ R D Y+ +ISV G+ G A LF E+ G PD YNSL+
Sbjct: 317 VKVFEDMEAHR-CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 163 AHLHSRDKTKA-------------------------------LAKALGYFEKMKGMERCK 191
A R+ K L AL ++ MKG+
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+ +TY +++ + +A + + +L ++ + + P + TY+ ++ Y K G E E
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
+ M + KPD + +++++D + + K +++ ++ PS + M+L K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 312 ARLKDKAENVFKQMTEM-GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
D + + M E+ G P + S + + G +C A + + +++
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEI---SSVLVKG--ECFDLAARQLKVAITNGYELEND 610
Query: 371 TLNAMLDVYCINNLPQEADSLFQ 393
TL ++L Y + EA L +
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLE 633
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 139/339 (41%), Gaps = 41/339 (12%)
Query: 114 WYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA 173
W + +Y L+ A +FS++R +GC SV S++ ++ +
Sbjct: 676 WCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVV--VYCKLGFPE 733
Query: 174 LAKALGYFEKMKGME-RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
A + + KG C P Y I+ A+ + ++ S+ +L +S +PD+ T+
Sbjct: 734 TAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTW 790
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN------------------------ 268
N +M AY + G A+ M + P + + N
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQD 850
Query: 269 -----------LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
L++D++ + ++++++ S+ + P++ + M+ K +
Sbjct: 851 MGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
AE + +M E + S++ MY + K +++ + E+ ++ +T N ++
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLII 970
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+YC + P+E L Q+ R++ + P TYK L A+ K
Sbjct: 971 MYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 112/241 (46%), Gaps = 9/241 (3%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC--KPNIVTYN 198
++S M+ G P +Y +I L + K A+ + + ME K + +N
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMI--ELLCKGKRVRDAEIM-----VSEMEEANFKVELAIWN 931
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
+L+ + ++ +++ + E+ + PD TYN ++ Y + E ++ +M++
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
P L T+ LI ++GK++ ++ EQ+F+ LL K +++M+ + KA
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
E + + M G P+ T L+ Y +A+++ L +++V++ ++++D
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 379 Y 379
Y
Sbjct: 1112 Y 1112
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
P + ++ YGK +L KAE+V + + G P T SL+ Y C C +A+ +F+
Sbjct: 753 PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
++ V ++N +L C++ +E + + + + S+ L+ A+ +A +
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 420 XXXXXXXXXXXXXXGIIPNKRFF 442
G +P R +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLY 895
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF--EKMKGMERCKPNIVTYN 198
++ ++ TG PD + YN+LI + R + GY ++M+ + P + TY
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEE------GYLLMQQMRNL-GLDPKLDTYK 1001
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
++ AF + +EQ LF++L + D Y+ +M G + E +L MK+
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+P L T +LL+ SY + E+V +L ++ + + ++S++ Y +++ +
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSG 1121
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
+M + G P + F + L L + + + L ++
Sbjct: 1122 IERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPEL 1181
Query: 379 YCINNLPQEADSLFQRARSIK 399
L E D F++ +SI+
Sbjct: 1182 -----LVSEVDGWFEKLKSIE 1197
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 161/324 (49%), Gaps = 19/324 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +++ + K+G LA+ L +M P +YN++I A + K + AL F
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN----YKNVNDALNLF 279
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+M KG+ +PN+VTYN ++R G+ + L D+ E ++P++ T++ ++DA+
Sbjct: 280 TEMDNKGI---RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
K G + E E + M PD+ T++ LI+ + + D+ + +F+ ++ P++
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF-----CDCVSKAK 354
T+N+++ + KA+ D+ +F++M++ G + VT+ +LI +GF CD A+
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI--HGFFQARECD---NAQ 451
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+F +V V + T + +LD C N + A +F+ + K+ PD TY ++ +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
KA G+ PN
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKTKALAKA 177
+Y+ +I + A+ LF+EM N G RP+ YNSLI + D ++ L+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + PN+VT++ ++ AF + GK+ + L+ ++ + + PDI+TY+ +++
Sbjct: 318 IE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + E + M M S C P+++T+N LI + K ++ D+ ++F+ + +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL----------------- 340
+ T+ +++ + +AR D A+ VFKQM G P +T+ L
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 341 -----------IYMY-----GFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
IY Y G C V +LF L V+ V T M+ +C
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
L +EAD+LF+ + LPD+ TY L +A+ +
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+SKL+S + K + L + L +M+N G + Y+ LI+ + L+ AL
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC----RRSQLSLALAVL 139
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + +P+IVT N +L F ++ SL + E PD +T+N ++ +
Sbjct: 140 AKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM C+PDL+T+ ++++ K+ D + K + + K +P +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSKAKELF 357
+N+++ + + A N+F +M G P+ VT+ SLI C C S A L
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR----CLCNYGRWSDASRLL 314
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ V T +A++D + EA+ L+ + PD TY L +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 152/350 (43%), Gaps = 36/350 (10%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA------ 175
YS LI+ ++ Q LA+ + ++M G PD NSL++ H + A++
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 176 -------------------------KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
+A+ ++M ++ C+P++VTY I++ + G +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
+ SL K +++ + P + YN ++DA + + + T M + +P+++T+N L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
I ++ ++ ++ K P++ TF++++ + K +AE ++ +M +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 331 APSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
P T+ SLI GFC D + +AK +F+ ++ V T N ++ +C E
Sbjct: 358 DPDIFTYSSLI--NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
LF+ ++ + TY L + +A G++P+
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV ++ +L A A+ K + V SL + + +S ++YTY+ +++ + +R + A+
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +PD++T N L++ + + + ++ +P TFN+++ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + +M G P VT+ I + G C + A L + + K++ V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYG--IVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
N ++D C +A +LF + + P+ TY L +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K++ +LF D+ +S P I ++ ++ A K + ++ +M++ +L T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+LI+ + ++ Q V +++ +P + T NS++ + A ++ QM EM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
GY P T +LI+ + S+A L D +V Q + T +++ C A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
SL ++ K+ P Y + A + GI PN
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VF+ M + D YS L+ + G+ A+ +F ++ + PD YN +I
Sbjct: 453 VFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
K + F + ++ KPN+VTY ++ F + G E+ ++LF+++ E
Sbjct: 512 C----KAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 225 VSPDIYTYNGVMDAYGKRG-------MIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
PD TYN ++ A+ + G +IREM + R + L+T N+L D
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS--CRFVGDASTIGLVT-NMLHDG 619
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 155/324 (47%), Gaps = 46/324 (14%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR---DKTKALAKA 177
+YS +I + K A+ LF+EM N G RP+ Y+SLIS + D ++ L+
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + PN+VT+N ++ AF + GK+ + L+ ++ + + PDI+TY+ +++
Sbjct: 322 IE--------RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + E + M M S C P+++T+N LI+ + K ++ D+ ++F+ + +
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL----------------- 340
+ T+ +++ + +AR D A+ VFKQM G P+ +T+ +L
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 341 -----------IYMY-----GFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
IY Y G C V +LF L V+ V N M+ +C
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 383 NLPQEADSLFQRARSIKVLPDAST 406
L +EAD+LF++ R LPD+ T
Sbjct: 554 GLKEEADALFRKMREDGPLPDSGT 577
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 156/310 (50%), Gaps = 11/310 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR + Y +++ + K+G LA L ++M + +Y+++I + R +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
AL F +M+ + +PN++TY+ ++ + + L D+ E ++P++ T
Sbjct: 278 DAL----NLFTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
+N ++DA+ K G + E E + M PD+ T++ LI+ + + D+ + +F+ ++
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC---D 348
P++ T+N+++ + KA+ D+ +F++M++ G + VT+ +LI +GF D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI--HGFFQARD 450
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
C A+ +F +V V + T N +LD C N ++A +F+ + K+ P TY
Sbjct: 451 C-DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 409 LLYKAYTKAN 418
++ + KA
Sbjct: 510 IMIEGMCKAG 519
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
A+ L +M G RPDT + +LI LH++ ++A+ ++M ++R C+PN+V
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-----ASEAVALVDRM--VQRGCQPNLV 226
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TY +++ + G ++ +L ++ + + ++ Y+ V+D+ K + + T M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ +P++IT++ LI +++ ++ ++ K P++ TFN+++ + K
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLN 373
+AE ++ +M + P T+ SLI GFC D + +AK +F+ ++ V T N
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLI--NGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXX 433
+++ +C E LF+ ++ + TY L + +A
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 434 GIIPN 438
G+ PN
Sbjct: 465 GVHPN 469
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 5/293 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + L + L +M+ G + YN LI+ + ALA LG
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA-LLGKM 146
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+IVT + +L + ++ +L + E PD T+ ++
Sbjct: 147 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM C+P+L+T+ ++++ K+ D + + +K + ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+++++ + K R +D A N+F +M G P+ +T+ SLI + S A L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
E K+ V T NA++D + EA+ L+ + PD TY L +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+FR M QR + + Y+ LI + A +F +M + G P+ YN+L+
Sbjct: 420 VELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
K L KA+ FE ++ + +P I TYNI++ +AGKVE LF L
Sbjct: 479 GLC----KNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
V PD+ YN ++ + ++G+ E +A+ +M+ + PD
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 9/256 (3%)
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
Y ++ LHS L A+G F M R P+I +N +L A A+ K + V SL
Sbjct: 53 YREILRNGLHSM----KLDDAIGLFGGMVK-SRPLPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
+ + +S ++YTYN +++ + +R I A+L +M +P ++T + L++ Y
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
++ + ++ +P TF +++ +A + +M + G P+ VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 337 HESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ + + G C + A L + + +K++ V + ++D C +A +LF
Sbjct: 228 YG--VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 395 ARSIKVLPDASTYKLL 410
+ V P+ TY L
Sbjct: 286 MENKGVRPNVITYSSL 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y ILR + K++ LF + +S P I+ +N ++ A K + ++ +M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+L T+N+LI+ + ++ Q + +++ +PS+ T +S++ Y +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A + QM EMGY P +T +LI+ + S+A L D +V+ Q + T ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGII 436
+ C A +L + + K+ + Y + + K G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 437 PN 438
PN
Sbjct: 293 PN 294
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 152/299 (50%), Gaps = 9/299 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +++VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC----KDGSLDNAFNLF 286
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+M+ ++ K +I+TYN ++ F AG+ + L +D+ + +SP++ T++ ++D++ K
Sbjct: 287 NEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G +RE + +L M P+ IT+N LID + K+ + ++ Q+ ++ P + T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
FN ++ Y KA D +F++M+ G + VT+ +L+ GFC + AK+LF
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV--QGFCQSGKLEVAKKLFQE 463
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+V +V+ + + +LD C N ++A +F + K+ D Y ++ A+
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 47/350 (13%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+ R M+ +R D YS +I + K G A LF+EM G + D YN+LI
Sbjct: 248 MELLRKME-ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 163 AHLHS---RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
++ D K L + + PN+VT+++++ +F + GK+ + + L K+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIK--------RKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ + ++P+ TYN ++D + K + E M+ M S C PD++TFN+LI+ Y K +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
D ++F+ + + T+N++V + ++ + A+ +F++M P V+++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 340 L------------------------------IYM---YGFCDC--VSKAKELFDGLVESK 364
L IYM +G C+ V A +LF L
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
V++ N M+ C + +AD LF++ PD TY +L +A+
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 146/308 (47%), Gaps = 13/308 (4%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D +++ L++ + + + A+ L M G +P N+L++ + +
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN----GKV 209
Query: 175 AKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+ A+ ++M G + PN VTY +L ++G+ L + ++E + D Y
Sbjct: 210 SDAVVLIDRMVETGFQ---PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++D K G + + M+ K D+IT+N LI + ++D ++ + +++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCV 350
K P++ TF+ ++ ++ K +A+ + K+M + G AP+ +T+ SLI GFC + +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI--DGFCKENRL 384
Query: 351 SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+A ++ D ++ + T N +++ YC N + LF+ V+ + TY L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 411 YKAYTKAN 418
+ + ++
Sbjct: 445 VQGFCQSG 452
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 47/319 (14%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV 156
+W ++ R M K++ ++ N V +S LI K+G+ R A L EM G P+T
Sbjct: 313 RWDDGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
YNSLI K L +A+ + M KG C P+I+T+NI++ + +A +++
Sbjct: 371 YNSLIDGFC----KENRLEEAIQMVDLMISKG---CDPDIMTFNILINGYCKANRIDDGL 423
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
LF+++ V + TYN ++ + + G + + + M S + +PD++++ +L+D
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 275 GKKQQFDKMEQVFKSLLRSKEK--------------------------PSLP-------- 300
+ +K ++F + +SK + SLP
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 301 -TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+N M+ + KA+ +F++MTE G+AP +T+ LI + D + A EL +
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 360 LVESKVQIKVSTLNAMLDV 378
+ S VST+ ++++
Sbjct: 604 MKSSGFPADVSTVKMVINM 622
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 7/291 (2%)
Query: 149 GCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
G PDT ++N+L++ L R +++AL ++M M KP ++T N ++
Sbjct: 153 GYEPDTVIFNTLLNGLCLECR-----VSEALELVDRMVEMGH-KPTLITLNTLVNGLCLN 206
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
GKV L + E+ P+ TY V++ K G +L +M+ K D + +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
+++ID K D +F + K + T+N+++ + A D + + M +
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 328 MGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQE 387
+P+ VT LI + + +A +L +++ + T N+++D +C N +E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 388 ADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
A + S PD T+ +L Y KAN G+I N
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 123/319 (38%), Gaps = 46/319 (14%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ LF +M + P +N L SA ++ K L AL + KG+ +I T
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAI--AKTKQYELVLALCKQMESKGIAH---SIYTL 126
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+I++ F + K+ S + + PD +N +++ + E ++ RM
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY----GKAR 313
KP LIT N L++ + + ++ + +P+ T+ VLN G+
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP-VLNVMCKSGQTA 245
Query: 314 LK--------------------------------DKAENVFKQMTEMGYAPSFVTHESLI 341
L D A N+F +M G+ +T+ +LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 342 YMYGFCDCV--SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
GFC+ +L +++ K+ V T + ++D + +EAD L +
Sbjct: 306 --GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 400 VLPDASTYKLLYKAYTKAN 418
+ P+ TY L + K N
Sbjct: 364 IAPNTITYNSLIDGFCKEN 382
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 158/329 (48%), Gaps = 48/329 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI+ G G R A+ + +M + G PD +N ++SA+ R +KAL+ YF
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS----YF 139
Query: 182 EKMKGME------------------------------------RCKPNIVTYNIILRAFA 205
E MKG + C+P++VT+ I+ ++
Sbjct: 140 ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS 199
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
G++E ++F+ + + P+I +YN +M AY GM ++L +K N PD++
Sbjct: 200 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++ L++SYG+ +Q K ++VF + + + KP++ T+N+++ YG +A +F+QM
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK----VQIKVSTLNAMLDVYCI 381
+ G P+ V S+ + C SK K D ++ + + + + N+ + Y
Sbjct: 320 EQDGIKPNVV---SVCTLLAACS-RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLL 410
++A +L+Q R KV D+ T+ +L
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTIL 404
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 8/313 (2%)
Query: 108 WMQKQRWYM-ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLH 166
+ + Q+W D Y LI+ G+ GQ R AM L +M P S YN+LI+A
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 167 SRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVS 226
S + +AL + G P++VT+NI+L A+ + + S F+ + + V
Sbjct: 94 SGNWREALEVCKKMTDNGVG-----PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVR 148
Query: 227 PDIYTYNGVMDAYGKRGMIREMEAMLTRM--KSNQCKPDLITFNLLIDSYGKKQQFDKME 284
PD T+N ++ K G + + M K +C+PD++TF ++ Y K + +
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
VF++++ KP++ ++N+++ Y + A +V + + G P V++ L+ Y
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
G KAKE+F + + + + V T NA++D Y N EA +F++ + P+
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Query: 405 STYKLLYKAYTKA 417
+ L A +++
Sbjct: 329 VSVCTLLAACSRS 341
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 135/274 (49%), Gaps = 9/274 (3%)
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
+N R D +YN +I LH+R A+ L +FE K CKP+ TY+ ++ A
Sbjct: 5 KNYCARND--IYNMMI--RLHARHNWVDQARGL-FFEMQKW--SCKPDAETYDALINAHG 57
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+AG+ +L D+ + ++P TYN +++A G G RE + +M N PDL+
Sbjct: 58 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 117
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T N+++ +Y +Q+ K F+ + +K +P TFN ++ K +A ++F M
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 326 TE--MGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
E P VT S++++Y + + +F+ +V ++ + + NA++ Y ++
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ A S+ + ++PD +Y L +Y ++
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 7/301 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRN--TGCRPDTSVYNSLISAHLHSRDKTKALA 175
D ++ +I + K GQ+ A+ LF+ MR CRPD + S++ HL+S
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 207
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+A+ FE M E KPNIV+YN ++ A+A G S+ D+ ++ + PD+ +Y +
Sbjct: 208 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+++YG+ + + + M+ + KP+++T+N LID+YG + ++F+ + +
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
KP++ + +++ +++ K + V G + + S I Y + KA
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
L+ + + KV+ T ++ C + EA S + + + Y + AY+
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYS 444
Query: 416 K 416
K
Sbjct: 445 K 445
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 134/299 (44%), Gaps = 9/299 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ G + A+ + +++ G PD Y L++++ SR KA L
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL--- 282
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M ER KPN+VTYN ++ A+ G + + +F+ +++ + P++ + ++ A +
Sbjct: 283 --MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
++ +L+ +S + +N I SY + +K +++S+ + K K T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 302 FNSMVLNYGKARLKDKAENV--FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
F +L G R+ E + K+M ++ + + S++ Y V++A+ +F+
Sbjct: 401 FT--ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ + + V +ML Y + +A LF + + PD+ L +A+ K
Sbjct: 459 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 112/263 (42%), Gaps = 11/263 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
+ Y+ I + A+ L+ MR + D+ + LIS + +A
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC----RMSKYPEA 417
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ Y ++M+ + V Y+ +L A+++ G+V + S+F + + PD+ Y ++
Sbjct: 418 ISYLKEMEDLSIPLTKEV-YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
AY + + M++N +PD I + L+ ++ K Q + V L+R KE P
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIP 535
Query: 298 -SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTH--ESLIYMYGFCDCVSKAK 354
+ F + + +A ++ + M Y PS +++++G V
Sbjct: 536 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDP--YLPSLSIGLTNQMLHLFGKSGKVEAMM 593
Query: 355 ELFDGLVESKVQIKVSTLNAMLD 377
+LF ++ S V I + T +L+
Sbjct: 594 KLFYKIIASGVGINLKTYAILLE 616
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y +++ M K G T+ A+ L S+M T +PD +Y+++I +D + A+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQY 317
Query: 178 LGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
L F +M KG+ PN+ TYN ++ F G+ L +D+ E ++PD+ T+N +
Sbjct: 318 L--FSEMLEKGI---APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ A K G + E E + M PD +T+N +I + K +FD + +F +
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----A 428
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKA 353
P + TFN+++ Y +A+ D+ + ++++ G + T+ +LI +GFC D ++ A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNAA 486
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++LF ++ V T N +L +C N +EA LF+ + K+ D Y ++
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 414 YTKAN 418
K +
Sbjct: 547 MCKGS 551
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 15/304 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMERCKPNIVT 196
A+ LF +M G P +N+LI+ L R + +A KM G + ++VT
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGR-----VLEAAALVNKMVG-KGLHIDVVT 263
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y I+ + G + +L ++E+ + PD+ Y+ ++D K G + + + + M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
P++ T+N +ID + ++ +++ + ++ + P + TFN+++ K
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNA 374
+AE + +M P VT+ S+I YGFC + AK +FD + V T N
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASP----DVVTFNT 437
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG 434
++DVYC E L + ++ + +TY L + + ++ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 435 IIPN 438
+ P+
Sbjct: 498 VCPD 501
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 107 RWMQKQRWYM--------ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
RW QR D ++ LIS K+G+ A L EM + PDT YN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 159 SLISAHL-HSR-DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
S+I H+R D K + F+ M P++VT+N I+ + +A +V++ L
Sbjct: 406 SMIYGFCKHNRFDDAKHM------FDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
+++ + + TYN ++ + + + + + M S+ PD IT N+L+ + +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
++ ++ ++F+ + SK +N ++ K D+A ++F + G P T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 337 HESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAML 376
+ +I GFC +S A LF + ++ + ST N ++
Sbjct: 575 YNVMI--SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R +A+ Y+ LI + A LF EM + G PDT N L L+ +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL----LYGFCEN 515
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ L +AL FE ++ M + + V YNII+ + KV++ LF L V PD+ T
Sbjct: 516 EKLEEALELFEVIQ-MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
YN ++ + + I + + +MK N +PD T+N LI K + DK
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A+ + KM+ + R NI ++NI+++ F K+ S F L + PD+ T+N ++
Sbjct: 125 AISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 237 D---------------AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
Y E A+ +M P +ITFN LI+ + +
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + ++ + T+ ++V K A N+ +M E P V + ++I
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
S A+ LF ++E + V T N M+D +C +A L + ++
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 402 PDASTYKLLYKAYTK 416
PD T+ L A K
Sbjct: 364 PDVLTFNALISASVK 378
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 47/349 (13%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L + + M+K + AD +Y+ +I + K A+ LF+EM N G RPD Y+SLIS
Sbjct: 243 LSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 163 AHLHS---RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
+ D ++ L+ + + PN+VT++ ++ AF + GK+ + L+ +
Sbjct: 302 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ + + PDI+TY+ +++ + + E + M M S C P+++T++ LI + K ++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
++ ++F+ + + + T+ +++ + +AR D A+ VFKQM +G P+ +T+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 340 L----------------------------IYMY-----GFCDC--VSKAKELFDGLVESK 364
L IY Y G C V ELF L
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
V V N M+ +C +EADSL ++ + LP++ TY L +A
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 160/332 (48%), Gaps = 15/332 (4%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y +++ + K+G LA+ L +M D +YN++I K
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC----KY 271
Query: 172 KALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K + AL F +M KG+ +P++ TY+ ++ G+ + L D+ E ++P++
Sbjct: 272 KHMDDALNLFTEMDNKGI---RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
T++ ++DA+ K G + E E + M PD+ T++ LI+ + + D+ + +F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC-- 347
++ P++ T+++++ + KA+ ++ +F++M++ G + VT+ +LI +GF
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI--HGFFQA 446
Query: 348 -DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
DC A+ +F +V V + T N +LD C N +A +F+ + + PD T
Sbjct: 447 RDC-DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 407 YKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
Y ++ + KA G+ PN
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + L + L +M+ G D Y+ I+ + L+ AL
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC----RRSQLSLALAVL 141
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + +P+IVT + +L + + ++ +L + E PD +T+ ++
Sbjct: 142 AKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ +M C+PDL+T+ +++ K+ D + K + + K + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSKAKELF 357
+N+++ K + D A N+F +M G P T+ SLI C C S A L
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS----CLCNYGRWSDASRLL 316
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ V T +A++D + EA+ L+ + PD TY L +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV +N +L A A+ K E V SL + + +S D+YTY+ ++ + +R + A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +PD++T + L++ Y ++ + ++ KP TF +++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + QM + G P VT+ +++ G C + A L + + K++ V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVV--NGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
N ++D C +A +LF + + PD TY L
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
KV+ LF D+ +S P I +N ++ A K + ++ +M++ DL T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+ I+ + ++ Q V +++ +P + T +S++ Y ++ A + QM EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
GY P T +LI+ + S+A L D +V+ Q + T +++ C A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTK 416
SL ++ K+ D Y + K
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 43/206 (20%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+FR M QR + + Y+ LI + A +F +M + G P+ YN L+
Sbjct: 418 MELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 163 AHLHSRDKTKALAKALGYFEKMK----------------GMERCK--------------- 191
K LAKA+ FE ++ GM CK
Sbjct: 477 GLC----KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM--CKAGKVEDGWELFCNLS 530
Query: 192 -----PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIR 246
PN++ YN ++ F + G E+ +SL K + E P+ TYN ++ A + G
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 247 EMEAMLTRMKSNQCKPDLITFNLLID 272
++ M+S D T L+ +
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTN 616
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 161/322 (50%), Gaps = 15/322 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +++ + K+G LA+ L +M D +Y ++I A + ++ + AL F
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN----VNDALNLF 278
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+M KG+ +PN+VTYN ++R G+ + L D+ E ++P++ T++ ++DA+
Sbjct: 279 TEMDNKGI---RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
K G + E E + M PD+ T++ LI+ + + D+ + +F+ ++ P++
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI---YMYGFCDCVSKAKEL 356
T+N+++ + KA+ ++ +F++M++ G + VT+ +LI + G CD A+++
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD---MAQKI 452
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
F +V V + T + +LD C ++A +F+ + K+ PD TY ++ + K
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 417 ANSXXXXXXXXXXXXXXGIIPN 438
A G+ PN
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPN 534
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 160/349 (45%), Gaps = 47/349 (13%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L + + M+K + AD +Y+ +I + A+ LF+EM N G RP+ YNSLI
Sbjct: 240 LSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 163 AHLHS---RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
+ D ++ L+ + + PN+VT++ ++ AF + GK+ + L+ +
Sbjct: 299 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ + + PDI+TY+ +++ + + E + M M S C P+++T+N LI + K ++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
++ ++F+ + + + T+N+++ +A D A+ +FK+M G P +T+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 340 L----------------------------IYMY-----GFCDC--VSKAKELFDGLVESK 364
L IY Y G C V +LF L
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
V+ V M+ +C L +EAD+LF+ + LP++ TY L +A
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 161/383 (42%), Gaps = 37/383 (9%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L + K +K+ + + MQ R D Y+ LI+ ++ Q LA+ + +M
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALAVLGKMMKL 144
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALA-------------------------------KA 177
G PD +SL++ + H + ++A+A +A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ ++M C+P++ TY ++ + G ++ SL K +++ + D+ Y ++D
Sbjct: 205 VALIDRMVA-RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
A + + + T M + +P+++T+N LI ++ ++ ++ K P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKE 355
++ TF++++ + K +AE ++ +M + P T+ SLI GFC D + +AK
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI--NGFCMHDRLDEAKH 381
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+F+ ++ V T N ++ +C +E LF+ ++ + TY L +
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 416 KANSXXXXXXXXXXXXXXGIIPN 438
+A G+ P+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPD 464
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + L + L M+N D YN LI+ ALA LG
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA-VLGKM 141
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+IVT + +L + ++ + +L + P+ T+N ++
Sbjct: 142 MKL-GYE---PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM + C+PDL T+ +++ K+ D + K + + K + +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV----SKAKELF 357
+ +++ + + A N+F +M G P+ VT+ SLI C C S A L
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR----CLCNYGRWSDASRLL 313
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ V T +A++D + EA+ L+ + PD TY L +
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV +N +L A A+ K + V SL + + +S D+Y+YN +++ + +R + A+
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +PD++T + L++ Y ++ + + + + +P+ TFN+++
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + +M G P T+ +++ G C + A L + + K++ V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVV--NGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++D C +A +LF + + P+ TY L +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K++ LF ++ +S P I +N ++ A K + ++ RM++ + DL ++N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+LI+ + ++ Q V +++ +P + T +S++ Y + +A + QM M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
Y P+ VT +LI+ + S+A L D +V Q + T +++ C A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
SL ++ K+ D Y + A + GI PN
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+FR M QR + + Y+ LI + + G +A +F +M + G PD Y+ L+
Sbjct: 415 MELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 163 AHLHSRDKTKALAKALGYFEKMK----------------------------------GME 188
K L KAL FE ++ ++
Sbjct: 474 GLC----KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 189 RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREM 248
KPN++ Y ++ F + G E+ ++LF+++ E P+ TYN ++ A + G
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 249 EAMLTRMKSNQCKPDLITFNLLID 272
++ M+S D T +++I+
Sbjct: 590 AELIKEMRSCGFVGDASTISMVIN 613
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 17/301 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +++ M K G T+ A+ L S+M T +PD +Y+++I +D + A+ L F
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQYL--F 319
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+M KG+ PN+ TYN ++ F G+ L +D+ E ++PD+ T+N ++ A
Sbjct: 320 SEMLEKGI---APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
K G + E E + M PD +T+N +I + K +FD + +F + P +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDV 432
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELF 357
TFN+++ Y +A+ D+ + ++++ G + T+ +LI +GFC D ++ A++LF
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNAAQDLF 490
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++ V T N +L +C N +EA LF+ + K+ D Y ++ K
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 418 N 418
+
Sbjct: 551 S 551
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 15/304 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMERCKPNIVT 196
A+ LF +M G P +N+LI+ L R + +A KM G + ++VT
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGR-----VLEAAALVNKMVG-KGLHIDVVT 263
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y I+ + G + +L ++E+ + PD+ Y+ ++D K G + + + + M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
P++ T+N +ID + ++ +++ + ++ + P + TFN+++ K
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNA 374
+AE + +M P VT+ S+I YGFC + AK +FD + V T N
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASP----DVVTFNT 437
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG 434
++DVYC E L + ++ + +TY L + + ++ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 435 IIPN 438
+ P+
Sbjct: 498 VCPD 501
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 25/323 (7%)
Query: 107 RWMQKQRWYM--------ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
RW QR D ++ LIS K+G+ A L EM + PDT YN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 159 SLISAHL-HSR-DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
S+I H+R D K + F+ M P++VT+N I+ + +A +V++ L
Sbjct: 406 SMIYGFCKHNRFDDAKHM------FDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
+++ + + TYN ++ + + + + + M S+ PD IT N+L+ + +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
++ ++ ++F+ + SK +N ++ K D+A ++F + G P T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 337 HESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ +I GFC +S A LF + ++ + ST N ++ ++ L
Sbjct: 575 YNVMI--SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 395 ARSIKVLPDASTYKLLYKAYTKA 417
RS DA T K++ T
Sbjct: 633 MRSNGFSGDAFTIKMVADLITDG 655
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A+ + KM+ + R NI ++NI+++ F K+ S F L + PD+ T+N ++
Sbjct: 125 AISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 237 D---------------AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
Y E A+ +M P +ITFN LI+ + +
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + ++ + T+ ++V K A N+ +M E P V + ++I
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
S A+ LF ++E + V T N M+D +C +A L + ++
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 402 PDASTYKLLYKAYTK 416
PD T+ L A K
Sbjct: 364 PDVLTFNALISASVK 378
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 13/356 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
LF G DK L ++ K+ + DN +Y+ LI +KG +AM L +EM
Sbjct: 384 LFTRSGNLDKAL----MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCK-PNIVTYNIILRAFAQA 207
GC D YN++ LH K K L +A F +M ER P+ T I++ +
Sbjct: 440 GCAMDVVTYNTI----LHGLCKRKMLGEADKLFNEMT--ERALFPDSYTLTILIDGHCKL 493
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G ++ LF+ + E + D+ TYN ++D +GK G I + + M S + P I++
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
++L+++ K + +V+ ++ KP++ NSM+ Y ++ E+ ++M
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 328 MGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI--KVSTLNAMLDVYCINNLP 385
G+ P +++ +LIY + + +SKA L + E + + V T N++L +C N
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRF 441
+EA+ + ++ V PD STY + + ++ G P+ +F
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 15/298 (5%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
+++ + K G+ S+++ G PD YN+LISA+ +K L + FE M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY-----SSKGLMEEA--FELM 293
Query: 185 KGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
M + P + TYN ++ + GK E+ +F ++ S +SPD TY ++ K+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G + E E + + M+S PDL+ F+ ++ + + DK F S+ + P +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGL 360
++ Y + + A N+ +M + G A VT+ ++ ++G C + +A +LF+ +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI--LHGLCKRKMLGEADKLFNEM 471
Query: 361 VESKVQIKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
E + TL ++D +C + NL Q A LFQ+ + ++ D TY L + K
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNL-QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 5/292 (1%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
LI + + G LA ++ E+ +G + N +++A L K + + L ++
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA-LCKDGKMEKVGTFLSQVQE- 263
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
KG+ P+IVTYN ++ A++ G +E+ L + SP +YTYN V++ K G
Sbjct: 264 KGV---YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ + M + PD T+ L+ KK + E+VF + P L F+S
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK 364
M+ + ++ DKA F + E G P V + LI Y +S A L + +++
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ V T N +L C + EAD LF + PD+ T +L + K
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 141/330 (42%), Gaps = 40/330 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I+ + K G+ A +F+EM +G PD++ Y SL+ D + + F
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD----VVETEKVF 363
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ + P++V ++ ++ F ++G +++ F + E+ + PD Y ++ Y +
Sbjct: 364 SDMRSRD-VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFN--------------------------------- 268
+GMI + M C D++T+N
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 269 --LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+LID + K ++F+ + + + + T+N+++ +GK D A+ ++ M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
P+ +++ L+ +++A ++D ++ ++ V N+M+ YC +
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ +S ++ S +PD +Y L + +
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 9/294 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LIS KG A L + M G P YN++I+ K +A F
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC----KHGKYERAKEVF 328
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+M G+ P+ TY +L + G V + +F D+ V PD+ ++ +M +
Sbjct: 329 AEMLRSGL---SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G + + +K PD + + +LI Y +K + +L+ +
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
T+N+++ K ++ +A+ +F +MTE P T LI + + A ELF
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+ E ++++ V T N +LD + A ++ S ++LP +Y +L A
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 141/294 (47%), Gaps = 5/294 (1%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
S L+ ++ + G +RL + + + C + SV++ LI ++ +R K + +A
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQAR-KLREAHEAFTLL- 191
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
+ KG +I N ++ + + G VE +++++ S V ++YT N +++A K
Sbjct: 192 RSKGF---TVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G + ++ L++++ PD++T+N LI +Y K ++ ++ ++ P + T+
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
N+++ K ++A+ VF +M G +P T+ SL+ V + +++F +
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
V + ++M+ ++ + +A F + ++PD Y +L + Y +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 151/321 (47%), Gaps = 9/321 (2%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS--AHLHSRDKTKALAKA 177
GV+ L SV+ G A+ FS+M+ P T N L+ A L D K
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR---- 248
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+F+ M G +P + TYNI++ + G VE LF+++ + PD TYN ++D
Sbjct: 249 --FFKDMIG-AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+GK G + + MK C+PD+IT+N LI+ + K + + ++ + + KP
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
++ +++++V + K + +A + M +G P+ T+ SLI +S A L
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ +++ V+ V T A++D C +EA+ LF + + V+P+ ++Y L + KA
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 418 NSXXXXXXXXXXXXXXGIIPN 438
+ GI P+
Sbjct: 486 KNMDRALELLNELKGRGIKPD 506
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K R + D Y+ +I GK G+ + F EM++ C PD YN+LI+ K
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC----K 344
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
L L ++ +MKG KPN+V+Y+ ++ AF + G ++Q + D+ + P+ Y
Sbjct: 345 FGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
TY ++DA K G + + + M + +++T+ LID ++ + E++F +
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC- 349
+ P+L ++N+++ + KA+ D+A + ++ G P + + + I +G C
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI--WGLCSLE 521
Query: 350 -VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
+ AK + + + E ++ ++D Y + P E L + + + T+
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 409 LLYKAYTK 416
+L K
Sbjct: 582 VLIDGLCK 589
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 98/227 (43%)
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
C P ++ + G +E+ F + V P + NG++ + K G +++
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
M +P + T+N++ID K+ + +F+ + P T+NSM+ +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
GK D F++M +M P +T+ +LI + + E + + + ++ V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + ++D +C + Q+A + R + ++P+ TY L A K
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 117/301 (38%), Gaps = 45/301 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + + + A LF +M G P+ + YN+LI H K K + +AL
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI----HGFVKAKNMDRALELL 495
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++KG KP+++ Y + K+E + ++ E + + Y +MDAY K
Sbjct: 496 NELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS-KEKPSLP 300
G E +L MK + ++TF +LID K + K F + + +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS--------------------------- 333
F +M+ K + A +F+QM + G P
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 334 --------FVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ----IKVSTLNAMLDVYCI 381
+ + SL++ C+ + KA+ + ++ + + +S L ++ CI
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734
Query: 382 N 382
+
Sbjct: 735 D 735
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 17/265 (6%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY-----TYN------GVMDAY 239
K ++ +Y I+ A NS+ K++ S D++ T N GV DA
Sbjct: 139 KHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDAL 198
Query: 240 GK----RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
GM+ E ++MK + P + N L+ + K + D +++ FK ++ +
Sbjct: 199 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 258
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
+P++ T+N M+ K + A +F++M G P VT+ S+I +G +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
F+ + + + V T NA+++ +C LP + ++ + + P+ +Y L A+
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE-FYREMKGNGLKPNVVSYSTLVDAF 377
Query: 415 TKANSXXXXXXXXXXXXXXGIIPNK 439
K G++PN+
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNE 402
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
A++ +Y+ L+ K G + L EM+ + LI K K ++K
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC----KNKLVSK 595
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A+ YF ++ + N + ++ + +VE +LF+ + + + PD Y +M
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D K+G + E A+ +M K DL+ + L+ Q K + ++
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 297 P 297
P
Sbjct: 716 P 716
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 146/301 (48%), Gaps = 12/301 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D +Y+ +I K G A+ LF M G R D YNSL++ S + A
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA---- 228
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ M PN++T+ ++ F + GK + L++++ V PD++TYN +++
Sbjct: 229 -ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
G + E + ML M + C PD++T+N LI+ + K ++ D+ ++F+ + +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKE 355
T+N+++ Y +A D A+ +F +M P+ T+ I +YG C V KA
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYS--ILLYGLCMNWRVEKALV 402
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
LF+ + +S++++ ++T N ++ C ++A LF+ + PD +Y + +
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 416 K 416
+
Sbjct: 463 R 463
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 5/297 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+SK++S + K L + LF M G D YN +I+ AL+ +G
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS-VVGKM 130
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K G E P++VT + ++ F Q +V L ++E PD+ YN ++D K
Sbjct: 131 MKF-GYE---PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G++ + + RM+ + + D +T+N L+ ++ ++ + ++ P++ T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
F +++ + K +A ++++MT P T+ SLI V +AK++ D +V
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
V T N +++ +C + E LF+ ++ D TY + + Y +A
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV ++ +L A++ + V SLF ++ + D+Y+YN V++ + ++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQ-FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ +M +PD++T + LI+ + + + FD ++ V K + +P + +N+++
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK-MEEMGFRPDVVIYNTIIDGSC 185
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV---SKAKELFDGLVESKVQI 367
K L + A +F +M G VT+ SL+ G C C S A L +V +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLV--AGLC-CSGRWSDAARLMRDMVMRDIVP 242
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
V T A++DV+ EA L++ V PD TY L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 165/390 (42%), Gaps = 76/390 (19%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L + L K +K +VF M+K R D Y+ +I MG+ G+ A+ LF+EM
Sbjct: 243 MLLDALAKDEK---ACQVFEDMKK-RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMIT 298
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIIL------ 201
G + YN+L+ K K + KA+ F +M C+PN TY+++L
Sbjct: 299 EGLTLNVVGYNTLMQV----LAKGKMVDKAIQVFSRMVETG-CRPNEYTYSLLLNLLVAE 353
Query: 202 --------------------------RAFAQAGKVEQVNSLFKD---------------- 219
R ++ G V + + LF D
Sbjct: 354 GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 220 -------------------LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ E V D YN V A GK I + + +MK +
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
PD+ T+N+LI S+G+ + D+ +F+ L RS KP + ++NS++ GK D+A
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
FK+M E G P VT+ +L+ +G + V A LF+ ++ Q + T N +LD
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLL 410
N EA L+ + + + PD+ TY +L
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
Y L+ A+L SRD +KA Y E +G K +I YN++L A A+ K QV
Sbjct: 206 YKCLLQAYLRSRDYSKAFDV---YCEIRRGGH--KLDIFAYNMLLDALAKDEKACQV--- 257
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
F+D+ + D YTY ++ G+ G E + M + +++ +N L+ K
Sbjct: 258 FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 317
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA-----RLKDKAENVFKQMTEMGYA 331
+ DK QVF ++ + +P+ T+ S++LN A RL E + MT+ Y+
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTY-SLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYS 376
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSL 391
T L + VS+A LF + V+ + + +ML+ C EA +
Sbjct: 377 YLVRTLSKLGH-------VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 392 FQRARSIKVLPDASTYKLLYKAYTK 416
+ V+ D Y ++ A K
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGK 454
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 11/280 (3%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A ++ E+R G + D YN L+ A ++D+ KA FE MK C+ + TY
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDAL--AKDE-----KACQVFEDMKK-RHCRRDEYTY 273
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++R + GK ++ LF ++ ++ ++ YN +M K M+ + + +RM
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
C+P+ T++LL++ + Q +++ V + SK + ++ +V K +
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI---SKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
A +F M ++ S++ +A E+ + E V N +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
LF++ + PD TY +L ++ +
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 131/242 (54%)
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
++L + + + P++ YN++LR +A + + + LF ++ + ++PD YTY+ +
Sbjct: 137 RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ ++GK GM + L +M+ ++ DL+ ++ LI+ + + K +F L RS
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
P L +NSM+ YGKA+L +A + K+M E G P+ V++ +L+ +Y +A
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+F + E + ++T N M+DVY ++ +EAD LF R + + P+ +Y + + Y
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 416 KA 417
+A
Sbjct: 377 EA 378
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 154/325 (47%), Gaps = 5/325 (1%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
L + + W L + W+ ++ Y Y+ ++ + + Q +A LF EMR P
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D Y++LI+ S K AL + +KM+ +R ++V Y+ ++ + +
Sbjct: 189 DRYTYSTLIT----SFGKEGMFDSALSWLQKME-QDRVSGDLVLYSNLIELSRRLCDYSK 243
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
S+F L S ++PD+ YN +++ YGK + RE ++ M P+ ++++ L+
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
Y + +F + VF + L T N M+ YG+ + +A+ +F + +M P
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
+ V++ +++ +YG + +A LF + ++ V T N M+ +Y ++A +L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 393 QRARSIKVLPDASTYKLLYKAYTKA 417
Q +S + P+A TY + + KA
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKA 448
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 152/308 (49%), Gaps = 7/308 (2%)
Query: 108 WMQK--QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
W+QK Q D +YS LI + + A+ +FS ++ +G PD YNS+I+ +
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY- 270
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
K K +A ++M PN V+Y+ +L + + K + S+F ++ E
Sbjct: 271 ---GKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 226 SPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ 285
+ D+ T N ++D YG+ M++E + + ++ +P+++++N ++ YG+ + F +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
+F+ + R + ++ T+N+M+ YGK +KA N+ ++M G P+ +T+ ++I ++G
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 346 FCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAS 405
+ +A LF L S V+I M+ Y L A L + +P +
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 506
Query: 406 TYKLLYKA 413
+L KA
Sbjct: 507 AITILAKA 514
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 149/330 (45%), Gaps = 36/330 (10%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ +I+V GK R A L EM G P+T Y++L+S ++ + +A
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK----FLEA 314
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L F +MK + C ++ T NI++ + Q V++ + LF L + + P++ +YN ++
Sbjct: 315 LSVFAEMKEVN-CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
YG+ + E + M+ + +++T+N +I YGK + +K + + + +P
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+ T+++++ +GKA D+A +F+++ G V ++++I Y + AK L
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 358 DGLV-------ESKVQI------------------------KVSTLNAMLDVYCINNLPQ 386
L E+ + I +S M+++Y N
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYV 553
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+F++ R+ PD++ ++ AY K
Sbjct: 554 NVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS +IS+ GK G+ A LF ++R++G D +Y ++I A+ ++ + A
Sbjct: 438 YSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY----ERVGLMGHAKRLL 493
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++K P+ + + A+AG+ E+ +F+ ES DI + +++ Y +
Sbjct: 494 HELK-----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
+ + +M++ PD +++++YGK+++F+K + V++ +
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 158/330 (47%), Gaps = 11/330 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR + Y +++ + K+G T LA+ L ++M D ++N++I S K
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID----SLCKY 273
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ + AL F++M+ + +PN+VTY+ ++ G+ + L D+ E ++P++ T
Sbjct: 274 RHVDDALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
+N ++DA+ K G E E + M PD+ T+N L++ + + DK +Q+F+ ++
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI---YMYGFCD 348
P + T+N+++ + K++ + +F++M+ G VT+ +LI + G CD
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
A+++F +V V + T + +LD C N ++A +F + ++ D Y
Sbjct: 453 ---NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 409 LLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ + KA G+ PN
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 157/340 (46%), Gaps = 50/340 (14%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS---AHLHSRDKTKA 173
AD +++ +I + K A+ LF EM G RP+ Y+SLIS ++ D ++
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L+ + EK + PN+VT+N ++ AF + GK + L+ D+ + + PDI+TYN
Sbjct: 318 LSDMI---EK-----KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++ + + + + M M S C PD++T+N LI + K ++ + ++F+ +
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VS 351
T+ +++ D A+ VFKQM G P +T+ I + G C+ +
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS--ILLDGLCNNGKLE 487
Query: 352 KAKELFDGLVESKVQI-----------------------------------KVSTLNAML 376
KA E+FD + +S++++ V T N M+
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
C L QEA +L ++ + LP++ TY L +A+ +
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 138/280 (49%), Gaps = 13/280 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
A+ L +M G RPDT + +LI LH++ ++A+ ++M ++R C+PN+V
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-----ASEAVALVDRM--VQRGCQPNLV 226
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TY +++ + G + +L ++ + + D+ +N ++D+ K + + + M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ +P+++T++ LI ++ Q+ ++ K P+L TFN+++ + K
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLN 373
+AE ++ M + P T+ SL+ GFC D + KAK++F+ +V V T N
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLV--NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++ +C + ++ LF+ ++ D TY L +
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGY 180
++ LI K+G+ A L+ +M PD YNSL++ +H R L KA
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR-----LDKAKQM 387
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE M + C P++VTYN +++ F ++ +VE LF+++ + D TY ++
Sbjct: 388 FEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G + + +M S+ PD++T+++L+D + +K +VF + +S+ K +
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD--CVSKAKELFD 358
+ +M+ KA D ++F ++ G P+ VT+ ++I G C + +A L
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI--SGLCSKRLLQEAYALLK 564
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ E T N ++ + + + L + RS + + DAST L+
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + + + L +M+ YN LI+ + ALA LG
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA-LLGKM 146
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+IVT + +L + ++ +L + E PD T+ ++
Sbjct: 147 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM C+P+L+T+ ++++ K+ D + + +K + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV----SKAKELF 357
FN+++ + K R D A N+FK+M G P+ VT+ SLI C C S A +L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS----CLCSYGRWSDASQLL 318
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ + T NA++D + EA+ L+ + PD TY L +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 5/239 (2%)
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L A+G F M R P+IV +N +L A A+ K + V SL + + + +YTYN
Sbjct: 66 LDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++ + +R I A+L +M +P ++T + L++ Y ++ + ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVS 351
+P TF +++ +A + +M + G P+ VT+ + + G C
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG--VVVNGLCKRGDTD 242
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A L + + +K++ V N ++D C +A +LF+ + + P+ TY L
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+FR M R + D Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 421 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
++ L KAL F+ M+ E K +I Y ++ +AGKV+ LF L
Sbjct: 480 LCNN----GKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
V P++ TYN ++ + +++E A+L +MK + P+ T+N LI ++
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y ILR K++ LF + +S P I +N ++ A K + ++ +M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+ L T+N+LI+ + ++ Q + +++ +PS+ T +S++ Y +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A + QM EMGY P +T +LI+ + S+A L D +V+ Q + T ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGII 436
+ C A +L + + K+ D + + + K GI
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 437 PN 438
PN
Sbjct: 293 PN 294
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 159/309 (51%), Gaps = 11/309 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y +++ + K+G T LA+ L ++M + +Y+++I + R +
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
AL F +M+ + +PN++TY+ ++ G+ + L D+ E ++P++ T
Sbjct: 271 DAL----NLFTEMEN-KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
++ ++DA+ K+G + + E + M P++ T++ LI+ + + + +Q+ + ++
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC---D 348
R P++ T+N+++ + KA+ DK +F++M++ G + VT+ +LI +GF D
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI--HGFFQARD 443
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
C A+ +F +V V + T N +LD C N +A +F+ + + PD TY
Sbjct: 444 C-DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 409 LLYKAYTKA 417
++ + KA
Sbjct: 503 IMIEGMCKA 511
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 144/305 (47%), Gaps = 13/305 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
A+ L +M G +PDT + +LI LH++ ++A+ ++M ++R C+P++V
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA-----SEAVALIDRM--VQRGCQPDLV 219
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TY ++ + G + +L ++ + + ++ Y+ V+D+ K + + T M
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ +P++IT++ LI ++ ++ ++ K P+L TF++++ + K
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLN 373
KAE ++++M + P+ T+ SLI GFC D + +AK++ + ++ V T N
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLI--NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXX 433
+++ +C + LF+ ++ + TY L + +A
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 434 GIIPN 438
G+ PN
Sbjct: 458 GVHPN 462
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 23/302 (7%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA---- 177
+SKL+S + K + L + +M G + YN LI+ + ALA
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 178 -LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
LGY +P+IVT N +L F ++ +L + E PD T+ ++
Sbjct: 141 KLGY----------EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
E A++ RM C+PDL+T+ +++ K+ D + + +K +
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSK 352
++ +++++ + K R +D A N+F +M G P+ +T+ SLI C C S
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS----CLCNYGRWSD 306
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A L ++E K+ + T +A++D + +A+ L++ + P+ TY L
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 413 AY 414
+
Sbjct: 367 GF 368
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI+ K + M LF EM G +T Y +LI +RD A F
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM----VF 451
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M + PNI+TYNI+L + GK+ + +F+ L S + PDIYTYN +++ K
Sbjct: 452 KQMVSVG-VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 242 RG 243
G
Sbjct: 511 AG 512
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 5/239 (2%)
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L A+G F M R P+I+ ++ +L A A+ K + V S + ++ +S ++YTYN
Sbjct: 59 LDDAIGLFGVM-AQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++ + + + A+L +M +PD++T N L++ + + + ++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVS 351
KP TF +++ +A + +M + G P VT+ +++ G C
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV--NGLCKRGDTD 235
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A L + + +K++ V + ++D C +A +LF + V P+ TY L
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 98/242 (40%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y +LR +++ LF + +S P I ++ ++ A K + + +M+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+L T+N+LI+ + + + + +++ +P + T NS++ +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A + QM EMGY P VT +LI+ + S+A L D +V+ Q + T A++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGII 436
+ C A +L + + K+ + Y + + K G+
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 437 PN 438
PN
Sbjct: 286 PN 287
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 9/318 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L + M Q + D ++ L++ + K G + A+ + M G PD YNS+IS
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
K + +A+ ++M + C PN VTYN ++ + +VE+ L + L
Sbjct: 339 GLC----KLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ PD+ T+N ++ R + M+S C+PD T+N+LIDS K + D+
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+ K + S S+ T+N+++ + KA +AE +F +M G + + VT+ +LI
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI- 512
Query: 343 MYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
G C V A +L D ++ + T N++L +C ++A + Q S
Sbjct: 513 -DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 401 LPDASTYKLLYKAYTKAN 418
PD TY L KA
Sbjct: 572 EPDIVTYGTLISGLCKAG 589
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 10/295 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LIS + K+ Q A L + + G PD +NSLI +R+ A+ F
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME----LF 423
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E+M+ + C+P+ TYN+++ + GK+++ ++ K ++ S + + TYN ++D + K
Sbjct: 424 EEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
RE E + M+ + + +T+N LID K ++ + Q+ ++ +KP T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
+NS++ ++ + KA ++ + MT G P VT+ +LI G C V A +L
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI--SGLCKAGRVEVASKLLRS 600
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA-RSIKVLPDASTYKLLYKA 413
+ + + N ++ EA +LF+ + PDA +Y+++++
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 31/331 (9%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL--- 174
D ++ LI + + Q R A+ + +M + G PD + +++ ++ D AL
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 175 ----------------------------AKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
AL + ++M + P+ T+N ++ +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
AG V+ + + + PD+YTYN V+ K G ++E +L +M + C P+ +T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+N LI + K+ Q ++ ++ + L P + TFNS++ R A +F++M
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
G P T+ LI + +A + + S V T N ++D +C N +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
EA+ +F V ++ TY L K+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 150/348 (43%), Gaps = 55/348 (15%)
Query: 51 SETRELVRLLTRKIS-DKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWM 109
E +E V +L + I+ D P T N L L K ++ E+ R +
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNT------------LISTLCKENQVEEATELARVL 391
Query: 110 QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
+ + D ++ LI + R+AM LF EMR+ GC PD YN LI + L S+
Sbjct: 392 -TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS-LCSKG 449
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVS--- 226
K L +AL ++M+ + C +++TYN ++ F +A K + +F +++ VS
Sbjct: 450 K---LDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 227 --------------------------------PDIYTYNGVMDAYGKRGMIREMEAMLTR 254
PD YTYN ++ + + G I++ ++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 255 MKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARL 314
M SN C+PD++T+ LI K + + ++ +S+ + +N ++ + R
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 315 KDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
+A N+F++M E AP +++ G C+ +E D LVE
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVF-RGLCNGGGPIREAVDFLVE 672
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 19/280 (6%)
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRD-KTKALAKALGYFEKMKGMERCKPNIVTYN 198
W+ E G +PDT YN +++ + K ++ A KM + KP++ T+N
Sbjct: 143 WMIDEF---GLKPDTHFYNRMLNLLVDGNSLKLVEISHA-----KMS-VWGIKPDVSTFN 193
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
++++A +A ++ + +D+ + PD T+ VM Y + G + + +M
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP---TFNSMVLNYGKARLK 315
C ++ N+++ + K+ + + + + S + P TFN++V KA
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM--SNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLN 373
A + M + GY P T+ S+I G C V +A E+ D ++ T N
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVI--SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++ C N +EA L + S +LPD T+ L +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 9/339 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L +F K+ + + +Y +++ +G+ G + +M+++ C TS + LI
Sbjct: 67 LRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
++ + + L+ ++ G+ KP+ YN +L ++ V +
Sbjct: 127 SYAQFELQDEILSVVDWMIDEF-GL---KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ PD+ T+N ++ A + +R ML M S PD TF ++ Y ++ D
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-GYAPSFVTHESLI 341
++ + ++ S + N +V + K + A N ++M+ G+ P T +L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 342 YMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
G C V A E+ D +++ V T N+++ C +EA + + +
Sbjct: 303 N--GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 400 VLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P+ TY L K N GI+P+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 49/332 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +I+ + K+G+ LA+ L ++M D +YN++I K K + A F
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC----KYKHMDDAFDLF 273
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
KM KG+ KP++ TYN ++ G+ + L D+ E ++PD+ +N ++DA+
Sbjct: 274 NKMETKGI---KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 240 GKRGMIREMEAMLTRM-KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
K G + E E + M KS C PD++ +N LI + K ++ ++ +VF+ + + +
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD---------- 348
T+ +++ + +AR D A+ VFKQM G P +T+ I + G C+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN--ILLDGLCNNGNVETALVV 448
Query: 349 -----------------------C----VSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
C V +LF L V+ V T M+ +C
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
L +EAD+LF + LP++ TY L +A
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 12/328 (3%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D ++ L+ + + + A+ L M GC+PD Y ++I+ L R +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING-LCKRGEPDLA 234
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
L EK K + ++V YN I+ + ++ LF ++ + PD++TYN
Sbjct: 235 LNLLNKMEKGK----IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ G + +L+ M PDL+ FN LID++ K+ + + E+++ +++SK
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 295 EK-PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC---DCV 350
P + +N+++ + K + ++ VF++M++ G + VT+ +LI +GF DC
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI--HGFFQARDC- 407
Query: 351 SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A+ +F +V V + T N +LD C N + A +F+ + + D TY +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 411 YKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+A KA G+ PN
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 14/300 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+SKL+S + K + L + L +M+N G + Y+ I+ + ALA LG
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA-ILGKM 136
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ P+IVT N +L F ++ + +L + E PD T+ ++ +
Sbjct: 137 MKLG----YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM C+PDL+T+ +I+ K+ + D + + + K + +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSKAKELF 357
+N+++ K + D A ++F +M G P T+ LI C C S A L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS----CLCNYGRWSDASRLL 308
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF-QRARSIKVLPDASTYKLLYKAYTK 416
++E + + NA++D + EA+ L+ + +S PD Y L K + K
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 8/291 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LIS + G+ A L S+M PD +N+LI A + K L +A +
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV----KEGKLVEAEKLY 343
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M + C P++V YN +++ F + +VE+ +F+++ + + + TY ++ + +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + +M S+ PD++T+N+L+D + VF+ + + K + T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDG 359
+ +M+ KA + ++F ++ G P+ VT+ ++ M GFC +A LF
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM--MSGFCRKGLKEEADALFVE 521
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ E T N ++ + + L + RS DAST+ L+
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 77 YVRLVRTEHCF-------LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVM 129
Y +V+++HCF L + K+ + +EVFR M QR + + Y+ LI
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYTTLIHGF 401
Query: 130 GKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER 189
+ A +F +M + G PD YN L+ ++ + AL FE M+ +
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV----VFEYMQKRDM 457
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
K +IVTY ++ A +AGKVE LF L V P++ TY +M + ++G+ E +
Sbjct: 458 -KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 250 AMLTRMKSNQCKPDLITFNLLI 271
A+ MK + P+ T+N LI
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLI 538
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 5/239 (2%)
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L A+G F M R P+IV ++ +L A A+ K + V SL + + +S ++YTY+
Sbjct: 56 LDDAIGLFGDMV-KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
++ + +R + A+L +M P ++T N L++ + + + + ++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK- 352
+P TF ++V + +A + ++M G P VT+ ++I G C
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI--NGLCKRGEPD 232
Query: 353 -AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A L + + + K++ V N ++D C +A LF + + + PD TY L
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%)
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
R Q K++ LF D+ +S P I ++ ++ A K + ++ +M++
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
+L T+++ I+ + ++ Q + +++ PS+ T NS++ + +A +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
QM EMGY P VT +L++ + S+A L + +V Q + T A+++ C
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
P A +L + K+ D Y + K
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI+V+ GQ LA ++M GC P+ +SL+ R T AL +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTT---FDALDLW 339
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+M +PN+V YN +++ F G + + S+F ++E SP+I TY +++ + K
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
RG + + +M ++ C P+++ + ++++ + +F + E + + + + PS+PT
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYA-PSFVTHESLIYMYGFCDCVSKAKELFDGL 360
FN+ + A D AE VF+QM + P+ VT+ L+ + + +A L +
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
V+ ST N +L C LP A L + PD T ++ AY K
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ + K + A L EM N GC PD Y ++IS+ L K
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV-----GLVK----- 233
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E + ER +P + YN ++ + + L +++ E +SP++ +Y+ +++
Sbjct: 234 EGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLI-DSYGKKQQFDKMEQVFKSLLRS-KEKPSL 299
G I + LT+M C P++ T + L+ + + FD ++ ++ ++R +P++
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD-LWNQMIRGFGLQPNV 352
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+N++V + KA +VF M E+G +P+ T+ SLI + + A +++
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++ S V M++ C ++ +EA+SL + P T+ K A
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 138/313 (44%), Gaps = 12/313 (3%)
Query: 108 WMQKQRWYMADNGV--YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
W Q R + V Y+ L+ G A+ +FS M GC P+ Y SLI+
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF- 397
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
K +L A+ + KM C PN+V Y ++ A + K ++ SL + + +
Sbjct: 398 ---AKRGSLDGAVYIWNKML-TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 226 SPDIYTYNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+P + T+N + G + E + +M + ++C P+++T+N L+D K + ++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
+ + + + S T+N+++ A L A + +M G +P +T +I Y
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 345 GFCDCVSKAKELFDGLVES---KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+A ++ D LV K + V + ++ C +N ++ L +R S ++
Sbjct: 574 CKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIV 632
Query: 402 PDASTYKLLYKAY 414
P +T+ +L +
Sbjct: 633 PSIATWSVLINCF 645
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 149/340 (43%), Gaps = 22/340 (6%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
+ + M+ Q ++ +++ ++ +ISV + G A+ +F ++ GC P +YN ++
Sbjct: 98 LLQQMKLQGFHCSED-LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT- 155
Query: 165 LHSRDKTKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
L ++ + + + MK G E PN+ TYN++L+A + KV+ L ++
Sbjct: 156 LLGENRIQMIYMV---YRDMKRDGFE---PNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
PD +Y V+ + + G+++E + R +P + +N LI+ K+ +
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKG 264
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMV---LNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
++ + ++ P++ ++++++ N G+ L A + QM + G P+ T S
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIEL---AFSFLTQMLKRGCHPNIYTLSS 321
Query: 340 LIYMYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
L+ A +L++ ++ +Q V N ++ +C + +A S+F I
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 399 KVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P+ TY L + K S G PN
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 33/262 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL-HSRDKT--------- 171
Y LI+ K+G A++++++M +GC P+ VY +++ A HS+ K
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 172 -----------KALAKALG----------YFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
A K L F +M+ RC PNIVTYN +L A+A ++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
E+ L +++ V TYN ++ G+ ++ +M + PD IT N++
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 271 IDSYGKKQQFDKMEQVFK--SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
I +Y K+ + ++ Q+ S R K +P + ++ +++ ++ ++ + ++M
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 329 GYAPSFVTHESLIYMYGFCDCV 350
G PS T LI + D V
Sbjct: 630 GIVPSIATWSVLINCFILDDIV 651
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 135/323 (41%), Gaps = 13/323 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA-KALGY 180
+ +I + GQ +L +M+ G ++ S+IS + + LA +A+
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY-----RQVGLAERAVEM 133
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F ++K C P++ YN +L +++ + +++D+ P+++TYN ++ A
Sbjct: 134 FYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K + + +L M + C PD +++ +I S + + + L + +P +
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVS 247
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+N+++ K A + ++M E G +P+ +++ +LI + + A +
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLF-QRARSIKVLPDASTYKLLYKAYTKANS 419
++ + TL++++ + +A L+ Q R + P+ Y L + + +
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 420 XXXXXXXXXXXXXXGIIPNKRFF 442
G PN R +
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTY 390
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 157/332 (47%), Gaps = 15/332 (4%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR + Y +++ + K+G LA L ++M D ++N++I S K
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID----SLCKY 198
Query: 172 KALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
+ + AL F++M KG+ +PN+VTY+ ++ G+ + L D+ E ++P++
Sbjct: 199 RHVDDALNLFKEMETKGI---RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
T+N ++DA+ K G E E + M PD+ T+N LI+ + + DK +Q+F+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI---YMYGF 346
++ P L T+N+++ + K++ + +F++M+ G VT+ +LI + G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
CD A+++F +V V + T + +LD C N ++A +F + ++ D
Sbjct: 376 CD---NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 407 YKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
Y + + KA G+ PN
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 50/340 (14%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS---AHLHSRDKTKA 173
AD +++ +I + K A+ LF EM G RP+ Y+SLIS ++ D ++
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L+ + EK + PN+VT+N ++ AF + GK + L D+ + + PDI+TYN
Sbjct: 243 LSDMI---EK-----KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++ + + + + M M S C PDL T+N LI + K ++ + ++F+ +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VS 351
T+ +++ D A+ VFKQM G P +T+ I + G C+ +
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS--ILLDGLCNNGKLE 412
Query: 352 KAKELFDGLVESKVQI-----------------------------------KVSTLNAML 376
KA E+FD + +S++++ V T N M+
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
C L QEA +L ++ + LPD+ TY L +A+ +
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 138/280 (49%), Gaps = 13/280 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
A+ L +M G RPDT + +LI LH++ ++A+ ++M ++R C+PN+V
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-----ASEAVALVDRM--VQRGCQPNLV 151
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TY +++ + G ++ +L ++ + + D+ +N ++D+ K + + + M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ +P+++T++ LI ++ Q+ ++ K P+L TFN+++ + K
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLN 373
+AE + M + P T+ SLI GFC D + KAK++F+ +V + T N
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLI--NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++ +C + ++ LF+ ++ D TY L +
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + L + L +M+ G + YN LI+ + ALA LG
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA-LLGKM 71
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E P+IVT + +L + ++ +L + E PD T+ ++
Sbjct: 72 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM C+P+L+T+ ++++ K+ D + + +K + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV----SKAKELF 357
FN+++ + K R D A N+FK+M G P+ VT+ SLI C C S A +L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS----CLCSYGRWSDASQLL 243
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ + T NA++D + EA+ L + PD TY L +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 11/292 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGY 180
++ LI K+G+ A L +M PD YNSLI+ +H R L KA
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR-----LDKAKQM 312
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE M + C P++ TYN +++ F ++ +VE LF+++ + D TY ++
Sbjct: 313 FEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G + + +M S+ PD++T+++L+D + +K +VF + +S+ K +
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD--CVSKAKELFD 358
+ +M+ KA D ++F ++ G P+ VT+ ++I G C + +A L
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI--SGLCSKRLLQEAYALLK 489
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ E T N ++ + + + L + RS + + DAST L+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E+FR M R + D Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 346 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
++ L KAL F+ M+ E K +I Y ++ +AGKV+ LF L
Sbjct: 405 LCNN----GKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
V P++ TYN ++ + +++E A+L +MK + PD T+N LI ++
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+I +N +L A A+ K + V SL + + +S ++YTYN +++ + +R I A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +P ++T + L++ Y ++ + ++ +P TF +++
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + +M + G P+ VT+ + + G C + A L + + +K++ V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYG--VVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
N ++D C +A +LF+ + + P+ TY L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 90/212 (42%)
Query: 227 PDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
P I+ +N ++ A K + ++ +M+ +L T+N+LI+ + ++ Q +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
+++ +PS+ T +S++ Y + A + QM EMGY P +T +LI+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
+ S+A L D +V+ Q + T +++ C A +L + + K+ D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 407 YKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ + + K GI PN
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
+F ++G+ W L V M + + D S ++S ++G R A F+E+++
Sbjct: 254 VFGKMGR--SWRKILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRAFAQ 206
G P T YN+L+ + T+AL+ +K ME C + VTYN ++ A+ +
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSV-------LKEMEENSCPADSVTYNELVAAYVR 363
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
AG ++ + + + + V P+ TY V+DAYGK G E + MK C P+ T
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+N ++ GKK + ++M ++ + + P+ T+N+M+ G + VF++M
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
G+ P T +LI YG C A +++ + + V+T NA+L+ +
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+++ +S P ++Y L+ + Y K +
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
M ++ M + Y+ +I GK G+ A+ LF M+ GC P+T YN+++S L +
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL-LGKK 434
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
++ + K L MK C PN T+N +L G + VN +F+++ PD
Sbjct: 435 SRSNEMIKMLC---DMKS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 229 -----------------------------------IYTYNGVMDAYGKRGMIREMEAMLT 253
+ TYN +++A ++G R E +++
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
MKS KP +++L++ Y K + +E++ + + PS +++L K R
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+E F + GY P V S++ ++ + +A+ + + + E + + T N
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+++D+Y +A+ + + ++ PD +Y + K + +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 140/338 (41%), Gaps = 44/338 (13%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
+ ++ ++++ G KG + +F EM++ G PD +N+LISA+ + A +K
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA-SKM 513
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
G + G C + TYN +L A A+ G ++ D+ P +Y+ ++
Sbjct: 514 YGEMTR-AGFNAC---VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 238 AYGKRGMIREMEAMLTRMKSNQC-----------------------------------KP 262
Y K G +E + R+K Q KP
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKP 629
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
D++ FN ++ + + +D+ E + +S+ P L T+NS++ Y + KAE +
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
K + + P V++ ++I GFC + +A + + E ++ + T N + Y
Sbjct: 690 KTLEKSQLKPDLVSYNTVI--KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ E + + + P+ T+K++ Y +A
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 141/311 (45%), Gaps = 41/311 (13%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VFR M K + D ++ LIS G+ G A ++ EM G + YN+L++A
Sbjct: 478 VFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA- 535
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK---VEQVNSLFKD-- 219
L + ++ + K KG KP +Y+++L+ +A+ G +E++ + K+
Sbjct: 536 LARKGDWRSGENVISDM-KSKGF---KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ 591
Query: 220 ------------------------------LDESIVSPDIYTYNGVMDAYGKRGMIREME 249
+ PD+ +N ++ + + M + E
Sbjct: 592 IFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
+L ++ + PDL+T+N L+D Y ++ + K E++ K+L +S+ KP L ++N+++ +
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
+ L +A + +MTE G P T+ + + Y ++ +++ + + ++ +
Sbjct: 712 CRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 370 STLNAMLDVYC 380
T ++D YC
Sbjct: 772 LTFKMVVDGYC 782
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+ Y D +++ ++S+ + A + +R G PD YNSL+ ++ +
Sbjct: 623 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
KA + L EK + KP++V+YN +++ F + G +++ + ++ E + P I+
Sbjct: 683 WKA-EEILKTLEK----SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF-DKMEQVFKS 289
TYN + Y GM E+E ++ M N C+P+ +TF +++D Y + ++ + M+ V
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV--- 794
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
SK K P F+ + R+++ E+
Sbjct: 795 ---SKIKTFDPCFDDQSIQRLALRVRENLES 822
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG-MIREMEAM 251
++ Y IL A+++ GK E+ LF+ + E SP + TYN ++D +GK G R++ +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L M+S K D T + ++ + ++ + ++ F L +P T+N+++ +GK
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
A + +A +V K+M E VT+ L+ Y +A + + + + V T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXX 431
++D Y EA LF + +P+ TY + K +
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 432 XXGIIPNK 439
G PN+
Sbjct: 449 SNGCSPNR 456
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/329 (17%), Positives = 128/329 (38%), Gaps = 53/329 (16%)
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
C+ + + NS++ L + +F+ +K E + ++V+ +++ +G
Sbjct: 105 CKKEVVLVNSIVEQPLTGLSR---------FFDSVKS-ELLRTDLVS---LVKGLDDSGH 151
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAY----GKRGMIREMEAMLTRMKSNQCKPDLI 265
E+ LF+ L S S + + V++ + G+ +L ++ + D+
Sbjct: 152 WERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVR 211
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK-------------- 311
+ ++ +Y + +++K +F+ + P+L T+N ++ +GK
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 312 --------------------AR--LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
AR L +A+ F ++ GY P VT+ +L+ ++G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
++A + + E+ T N ++ Y +EA + + V+P+A TY
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 410 LYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ AY KA G +PN
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 17/334 (5%)
Query: 68 EPLERTLNKYV-RLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLI 126
E +E L+ + RL E +L E++ W +E+F W + + Y + Y+ ++
Sbjct: 139 EDVEDALSPWAERLSNKERTIILKEQI----HWERAVEIFEWFKSKGCYELNVIHYNIML 194
Query: 127 SVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKG 186
++GK + R L+ EM G +P S Y +LI + K AL LG K+ G
Sbjct: 195 RILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC-WLGKMSKI-G 252
Query: 187 MERCKPNIVTYNIILRAFAQAGKVEQVNSLFK--DLDE----SIVSPDIYTYNGVMDAYG 240
M+ P+ VT I+L+ + +A + ++ FK DE S V YTYN ++D YG
Sbjct: 253 MQ---PDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G I+E RM P +TFN +I YG Q ++ + K+ ++ P
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT-MKLHCAPDTR 368
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+N ++ + K ++A FK+M + G P V++ +L+Y + V +A+ L +
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ V+I T +A+ +Y + +++ S F+R
Sbjct: 429 DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 15/295 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I G A LF M + G PD YN+L+ L S D K Y
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQI-LASADMPH---KGRCYL 563
Query: 182 EKMKG---MERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
EKM+ + C P Y ++ +F + G++ ++K++ E + PD+ Y +++A
Sbjct: 564 EKMRETGYVSDCIP----YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK-- 296
+ G +++ + + MK + + +N LI Y K D+ E +++ LL+S K
Sbjct: 620 FADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 297 -PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
P + T N M+ Y + + KAE +F M + G A F T ++ MY +A +
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQ 738
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + E K+ + N++L ++ ++ +EA F+ S + PD ST+K L
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+A+ FE K + N++ YNI+LR +A K V SL+ ++ + P TY +
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 228
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+D Y K G+ L +M +PD +T +++ Y K ++F K E+ FK +
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288
Query: 296 KP------SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
K S T+N+M+ YGK+ +A FK+M E G P+ VT ++I++YG
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+ + L + + T N ++ ++ NN + A + F+ + + PD +Y+
Sbjct: 349 LGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 410 LYKAYT 415
L A++
Sbjct: 408 LLYAFS 413
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 10/296 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I GK GQ + A F M G P T +N++I H++ + +L
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI--HIYGNNGQLGEVTSL--- 355
Query: 182 EKMKGME-RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
MK M+ C P+ TYNI++ + +E+ + FK++ + + PD +Y ++ A+
Sbjct: 356 --MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
R M+ E E ++ M + + D T + L Y + + +K FK + S
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS-E 472
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+++ + YG+ +AE VF E+ + + + +I YG KA ELF+ +
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ V T N ++ + ++P + ++ R + D Y + ++ K
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 18/284 (6%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
++ Y++D Y +IS K GQ +A ++ EM PD VY LI+A
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA----D 622
Query: 171 TKALAKALGYFEKMKGMERCKP-NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVS--- 226
T + +A+ Y E MK E P N V YN +++ + + G +++ ++++ L +S
Sbjct: 623 TGNVQQAMSYVEAMK--EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 227 PDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
PD+YT N +++ Y +R M+R+ EA+ MK + + + TF +++ Y K +F++ Q+
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMK-QRGEANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYG-KARLKDKAENVFKQMTEMGYAPSFVTHESL---IY 342
K + K ++NS++ + R K+ E FK+M G P T +SL +
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE-TFKEMVSSGIQPDDSTFKSLGTILM 798
Query: 343 MYGFC-DCVSKAKELFDGLVESKVQIKVSTLNAMLDVY-CINNL 384
G V K +E+ ++ +++ +STL++++ + C++ L
Sbjct: 799 KLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVDEL 842
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ L+ ++ +MR TG D Y ++IS+ + K L A
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV----KLGQLNMA 594
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+++M +P++V Y +++ AFA G V+Q S + + E+ + + YN ++
Sbjct: 595 EEVYKEMVEY-NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIK 653
Query: 238 AYGKRGMIREMEAMLTRMKSNQCK---PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
Y K G + E EA+ ++ + K PD+ T N +I+ Y ++ K E +F S+ +
Sbjct: 654 LYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
E TF M+ Y K ++A + KQM EM +++ S++ ++ +A
Sbjct: 714 EANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAV 772
Query: 355 ELFDGLVESKVQIKVSTLNAM 375
E F +V S +Q ST ++
Sbjct: 773 ETFKEMVSSGIQPDDSTFKSL 793
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
K ++ YN++++A+ + E+ LF+ + V+PD TYN ++ M +
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
L +M+ D I + +I S+ K Q + E+V+K ++ +P + + ++ +
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES--KVQI- 367
+A + + M E G + V + SLI +Y + +A+ ++ L++S K Q
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Query: 368 KVSTLNAMLDVYCINNLPQEADSLF 392
V T N M+++Y ++ ++A+++F
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIF 706
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 48/362 (13%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
G+ DK +EV K++ ++ +Y +I ++ + + A FSEM G P
Sbjct: 294 FGELDKVWKLIEV----MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
DT VY +LI R +A +K +F +M + P+++TY I+ F Q G + +
Sbjct: 350 DTVVYTTLIDGFC-KRGDIRAASK---FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVE 404
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
LF ++ + PD T+ +++ Y K G +++ + M C P+++T+ LID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV-----------------------LN- 308
K+ D ++ + + +P++ T+NS+V LN
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 309 -----------YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKE 355
Y K+ DKA+ + K+M G P+ VT L M GFC + ++
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL--MNGFCLHGMLEDGEK 582
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
L + ++ + +T N+++ YCI N + A ++++ S V PD TY+ L K +
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 416 KA 417
KA
Sbjct: 643 KA 644
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 151/369 (40%), Gaps = 31/369 (8%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E F M +Q + D VY+ LI K+G R A F EM + PD Y ++IS
Sbjct: 337 EAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 164 HLHSRDKTKA-------LAKAL------------GYFE--KMKGMER---------CKPN 193
D +A K L GY + MK R C PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+VTY ++ + G ++ N L ++ + + P+I+TYN +++ K G I E ++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
++ D +T+ L+D+Y K + DK +++ K +L +P++ TFN ++ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+ + E + M G AP+ T SL+ Y + + A ++ + V T
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXX 433
++ +C +EA LFQ + STY +L K + K
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 434 GIIPNKRFF 442
G+ +K F
Sbjct: 696 GLAADKEIF 704
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 117/286 (40%), Gaps = 5/286 (1%)
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPN 193
+T A+ +F E G + + YN +I H + A L ++KG P+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVI--HFVCQLGRIKEAHHLLLLMELKGY---TPD 280
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+++Y+ ++ + + G++++V L + + + P+ Y Y ++ + + E E +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
M PD + + LID + K+ + F + P + T+ +++ + +
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+A +F +M G P VT LI Y + A + + ++++ V T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
++D C A+ L I + P+ TY + K+ +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
+F++ E V ++ +YN V+ + G I+E +L M+ PD+I+++ +++ Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
+ + DK+ ++ + + R KP+ + S++ + +AE F +M G P V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 336 THESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
+ +LI GFC + A + F + + V T A++ +C EA LF
Sbjct: 353 VYTTLID--GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 394 RARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ PD+ T+ L Y KA G PN
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 48/362 (13%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
G+ DK +EV K++ ++ +Y +I ++ + + A FSEM G P
Sbjct: 294 FGELDKVWKLIEV----MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
DT VY +LI R +A +K +F +M + P+++TY I+ F Q G + +
Sbjct: 350 DTVVYTTLIDGFC-KRGDIRAASK---FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVE 404
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
LF ++ + PD T+ +++ Y K G +++ + M C P+++T+ LID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV-----------------------LN- 308
K+ D ++ + + +P++ T+NS+V LN
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 309 -----------YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKE 355
Y K+ DKA+ + K+M G P+ VT L M GFC + ++
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL--MNGFCLHGMLEDGEK 582
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
L + ++ + +T N+++ YCI N + A ++++ S V PD TY+ L K +
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 416 KA 417
KA
Sbjct: 643 KA 644
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 151/369 (40%), Gaps = 31/369 (8%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E F M +Q + D VY+ LI K+G R A F EM + PD Y ++IS
Sbjct: 337 EAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 164 HLHSRDKTKA-------LAKAL------------GYFE--KMKGMER---------CKPN 193
D +A K L GY + MK R C PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+VTY ++ + G ++ N L ++ + + P+I+TYN +++ K G I E ++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
++ D +T+ L+D+Y K + DK +++ K +L +P++ TFN ++ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+ + E + M G AP+ T SL+ Y + + A ++ + V T
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXX 433
++ +C +EA LFQ + STY +L K + K
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 434 GIIPNKRFF 442
G+ +K F
Sbjct: 696 GLAADKEIF 704
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 117/286 (40%), Gaps = 5/286 (1%)
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPN 193
+T A+ +F E G + + YN +I H + A L ++KG P+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVI--HFVCQLGRIKEAHHLLLLMELKGY---TPD 280
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+++Y+ ++ + + G++++V L + + + P+ Y Y ++ + + E E +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
M PD + + LID + K+ + F + P + T+ +++ + +
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+A +F +M G P VT LI Y + A + + ++++ V T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
++D C A+ L I + P+ TY + K+ +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
+F++ E V ++ +YN V+ + G I+E +L M+ PD+I+++ +++ Y
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
+ + DK+ ++ + + R KP+ + S++ + +AE F +M G P V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 336 THESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
+ +LI GFC + A + F + + V T A++ +C EA LF
Sbjct: 353 VYTTLID--GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 394 RARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ PD+ T+ L Y KA G PN
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 42/340 (12%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD----- 169
Y + ++ LI + + AM L M GC+PD Y +++ D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 170 --------------------------KTKALAKALGYFEKM--KGMERCKPNIVTYNIIL 201
K K + AL F++M KG+ +PN+VTY+ ++
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI---RPNVVTYSSLI 298
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
G+ + L D+ E ++PD++T++ ++DA+ K G + E E + M
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
P ++T++ LI+ + + D+ +Q+F+ ++ P + T+N+++ + K + ++ V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 322 FKQMTEMGYAPSFVTHESLI---YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
F++M++ G + VT+ LI + G CD A+E+F +V V + T N +LD
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCD---MAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
C N ++A +F+ + K+ P TY ++ + KA
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 15/323 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKTKALAKA 177
+Y+ +I + K A+ LF EM G RP+ Y+SLIS + D ++ L+
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + P++ T++ ++ AF + GK+ + L+ ++ + + P I TY+ +++
Sbjct: 318 IE--------RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + E + M M S C PD++T+N LI + K ++ ++ +VF+ + +
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKE 355
+ T+N ++ +A D A+ +FK+M G P+ +T+ +L + G C + KA
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL--LDGLCKNGKLEKAMV 487
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+F+ L SK++ + T N M++ C ++ LF V PD Y + +
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 416 KANSXXXXXXXXXXXXXXGIIPN 438
+ S G +PN
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPN 570
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 13/297 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+SKL+S + K + + + L +M+N G + Y+ LI+ ALA LG
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA-VLGKM 142
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K+ G E PNIVT + +L + + ++ + +L + + P+ T+N ++
Sbjct: 143 MKL-GYE---PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ RM + C+PDL+T+ ++++ K+ D + + + K +P +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSKAKELF 357
+N+++ K + D A N+FK+M G P+ VT+ SLI C C S A L
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS----CLCNYGRWSDASRLL 314
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++E K+ V T +A++D + EA+ L+ + P TY L +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 145/304 (47%), Gaps = 11/304 (3%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMERCKPNIVT 196
A+ L +M TG +P+T +N+LI LH++ ++A+ ++M + C+P++VT
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK-----ASEAMALIDRMVA-KGCQPDLVT 223
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
Y +++ + G + +L +++ + P + YN ++D K + + + M+
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+ +P+++T++ LI ++ ++ ++ K P + TF++++ + K
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNA 374
+AE ++ +M + PS VT+ SLI GFC D + +AK++F+ +V V T N
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLI--NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG 434
++ +C +E +F+ ++ + TY +L + +A G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 435 IIPN 438
+ PN
Sbjct: 462 VPPN 465
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 11/292 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGY 180
+S LI K+G+ A L+ EM P Y+SLI+ +H R L +A
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR-----LDEAKQM 383
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE M + C P++VTYN +++ F + +VE+ +F+++ + + + TYN ++
Sbjct: 384 FEFMVS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ G + + M S+ P+++T+N L+D K + +K VF+ L RSK +P++
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK--AKELFD 358
T+N M+ KA + ++F ++ G P V + ++I GFC SK A LF
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI--SGFCRKGSKEEADALFK 560
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ E N ++ + + + L + RS DAST L+
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 83 TEHCF-------LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQT 135
++HCF L + K+ + +EVFR M QR + + Y+ LI + + G
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDC 447
Query: 136 RLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIV 195
+A +F EM + G P+ YN+L+ K L KA+ FE ++ + +P I
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLC----KNGKLEKAMVVFEYLQ-RSKMEPTIY 502
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TYNI++ +AGKVE LF +L V PD+ YN ++ + ++G E +A+ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 256 KSNQCKPDLITFNLLI 271
K + P+ +N LI
Sbjct: 563 KEDGTLPNSGCYNTLI 578
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+I+ ++ +L A A+ K + V SL + + + + YTY+ +++ + +R + A+
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +P+++T + L++ Y ++ + + + + +P+ TFN+++
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + +M G P VT+ + + G C A L + + + K++ V
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYG--VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
N ++D C +A +LF+ + + P+ TY L
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 97/230 (42%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K++ +LF ++ +S P I ++ ++ A K + ++ +M++ + T++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+LI+ + ++ Q V +++ +P++ T +S++ Y ++ +A + QM
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
GY P+ VT +LI+ + S+A L D +V Q + T +++ C A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+L + K+ P Y + K GI PN
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 140/287 (48%), Gaps = 18/287 (6%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKTKAL 174
D +Y+ +I + K G A+ LF +M N G RPD +Y SL++ +S RD L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 175 AKALGYFEKMKGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+GM + KP+++T+N ++ AF + GK L+ ++ ++P+I+TY
Sbjct: 236 ----------RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+++ + G + E M M++ C PD++ + LI+ + K ++ D ++F + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ T+ +++ +G+ + A+ VF M G P+ T+ L++ + V K
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 353 AKELFDGLVESK---VQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
A +F+ + + + V + T N +L C N ++A +F+ R
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 11/289 (3%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGYFEK 183
L++ + Q LA +M G PD + SLI+ L +R + +A+ +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR-----MEEAMSMVNQ 167
Query: 184 MKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG 243
M M KP++V Y I+ + + G V SLF ++ + PD+ Y +++ G
Sbjct: 168 MVEMG-IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
R+ +++L M + KPD+ITFN LID++ K+ +F E+++ ++R P++ T+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLV 361
S++ + D+A +F M G P V + SLI GFC C V A ++F +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI--NGFCKCKKVDDAMKIFYEMS 344
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + T ++ + P A +F S V P+ TY +L
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 139/292 (47%), Gaps = 8/292 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ LI+ + AM + ++M G +PD +Y ++I S K + AL F
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID----SLCKNGHVNYALSLF 200
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M+ +P++V Y ++ +G+ +SL + + + + PD+ T+N ++DA+ K
Sbjct: 201 DQMENYG-IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + E + M P++ T+ LI+ + + D+ Q+F + P +
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ S++ + K + D A +F +M++ G + +T+ +LI +G + A+E+F +V
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLF---QRARSIKVLPDASTYKLL 410
V + T N +L C N ++A +F Q+ V P+ TY +L
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
Y ++ LHS +AL F M R P+I+ + +L A+ K + V +L
Sbjct: 40 YREILRNGLHSLQ----FNEALDLFTHMVE-SRPLPSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
L VS D+YT N +M+ + + + L +M +PD++TF LI+ +
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
+ ++ + ++ KP + + +++ + K + A ++F QM G P V
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 337 HESLIYMYGFCDCV--SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ SL+ G C+ A L G+ + K++ V T NA++D + +A+ L+
Sbjct: 215 YTSLV--NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 395 ARSIKVLPDASTYKLLYKAY 414
+ + P+ TY L +
Sbjct: 273 MIRMSIAPNIFTYTSLINGF 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 15/259 (5%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADN-GVYSKLISVMGKKGQTRLAMWLFSEMRN 147
L + K K+L E++ M R +A N Y+ LI+ +G A +F M
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMI--RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFA 205
GC PD Y SLI+ K K + A+ F +M KG+ N +TY +++ F
Sbjct: 311 KGCFPDVVAYTSLINGFC----KCKKVDDAMKIFYEMSQKGL---TGNTITYTTLIQGFG 363
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ---CKP 262
Q GK +F + V P+I TYN ++ G +++ + M+ + P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
++ T+N+L+ + +K VF+ + + + + T+ ++ KA A N+F
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 323 KQMTEMGYAPSFVTHESLI 341
+ G P+ VT+ ++I
Sbjct: 484 CSLPSKGVKPNVVTYTTMI 502
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+++F M Q+ + Y+ LI G+ G+ +A +FS M + G P+ YN L
Sbjct: 337 MKIFYEMS-QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL-- 393
Query: 163 AHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
LH + KAL FE M + M+ PNI TYN++L GK+E+ +F+D+
Sbjct: 394 --LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+ + I TY ++ K G ++ + + S KP+++T+ +I
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 154/326 (47%), Gaps = 42/326 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + + +A +F ++++TGC PD + YN L+ A+ K+ + + +
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY----GKSGKIDELFELY 843
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL-DESIVSPDIYTYNGVMDAYG 240
++M E C+ N +T+NI++ +AG V+ L+ DL + SP TY ++D
Sbjct: 844 KEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G + E + + M C+P+ +N+LI+ +GK + D +FK +++ +P L
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 301 TFNSMV------------LNY-----------------------GKARLKDKAENVFKQM 325
T++ +V L+Y GK+ ++A +F +M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 326 -TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
T G P T+ SLI G V +A ++++ + + ++ V T NA++ Y ++
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 385 PQEADSLFQRARSIKVLPDASTYKLL 410
P+ A +++Q + P+ TY+ L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 30/318 (9%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M D G+ Y+ LI + + + A+ LF M + G +P Y I + S D
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
AL FEKMK + PNIV N L + A+AG+ + +F L + + PD
Sbjct: 449 SVSALET----FEKMK-TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
TYN +M Y K G I E +L+ M N C+PD+I N LI++ K + D+ ++F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ K KP++ T+N+++ GK +A +F+ M + G P+ +T +L DC
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF------DC 617
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL---------PQEADSLFQRARSIKV 400
+ K E+ L K+ K+ + + DV+ N + +EA F + + + V
Sbjct: 618 LCKNDEVTLAL---KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 401 LPDASTYKLLYKAYTKAN 418
PD T L KA+
Sbjct: 674 YPDFVTLCTLLPGVVKAS 691
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 178/407 (43%), Gaps = 25/407 (6%)
Query: 43 RKKTNDDDSETRELVRLLTRKISDKEP---LERTLNKYVRLVRT-EHCFLLFEELGKHDK 98
RK + D S + E+ R L + D + +++ + LV T E C + E L K
Sbjct: 75 RKSSKPDLSSSEEVTRGL-KSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGK 133
Query: 99 WLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
VF MQK R D Y + + KG + A + +MR G + YN
Sbjct: 134 LEEMAYVFDLMQK-RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
LI L SR T+A+ + +M +E +P++ TY+ ++ + ++ V L K
Sbjct: 193 GLIHLLLKSRFCTEAME----VYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+++ + P++YT+ + G+ G I E +L RM C PD++T+ +LID+ +
Sbjct: 248 EMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ D ++VF+ + + KP T+ +++ + R D + + +M + G+ P VT
Sbjct: 308 KLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 339 SLIYMYGFCDCVSKA---KELFDGLVESKVQIKVSTLNAMLDVYC----INNLPQEADSL 391
L+ D + KA E FD L + Q + L+ + C ++ L +A L
Sbjct: 368 ILV------DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL-DDALEL 420
Query: 392 FQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
F S+ V P A TY + Y K+ GI PN
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 126/239 (52%), Gaps = 6/239 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L+++ + R + Y LI + K G+ A LF M + GCRP+ ++YN LI+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ + A A F++M E +P++ TY++++ G+V++ FK+L E
Sbjct: 935 GFGKAGEADAACA----LFKRMV-KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ-CKPDLITFNLLIDSYGKKQQFD 281
S ++PD+ YN +++ GK + E + MK+++ PDL T+N LI + G +
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+ +++ + R+ +P++ TFN+++ Y + + A V++ M G++P+ T+E L
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 8/259 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE-MR 146
L + GK K E+++ M A+ ++ +IS + K G A+ L+ + M
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECE-ANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 147 NTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
+ P Y LI K+ L +A FE M C+PN YNI++ F +
Sbjct: 884 DRDFSPTACTYGPLIDG----LSKSGRLYEAKQLFEGMLDY-GCRPNCAIYNILINGFGK 938
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
AG+ + +LFK + + V PD+ TY+ ++D G + E +K + PD++
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
+NL+I+ GK + ++ +F + S+ P L T+NS++LN G A + ++A ++ ++
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 326 TEMGYAPSFVTHESLIYMY 344
G P+ T +LI Y
Sbjct: 1059 QRAGLEPNVFTFNALIRGY 1077
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 7/280 (2%)
Query: 142 FSE--MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNI 199
FSE + N CR S+ +I K ++ A FEK +P + TYN+
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSC----KHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
++ +A +E +F + + PD+ TYN ++DAYGK G I E+ + M +++
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKA 318
C+ + IT N++I K D ++ L+ ++ P+ T+ ++ K+ +A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
+ +F+ M + G P+ + LI +G A LF +V+ V+ + T + ++D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
C+ E F+ + + PD Y L+ K++
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 137/342 (40%), Gaps = 41/342 (11%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
EVF M+ R + D Y L+ +SEM G PD + L+ A
Sbjct: 314 EVFEKMKTGR-HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
K +A + M+ + PN+ TYN ++ + +++ LF +++
Sbjct: 373 LC----KAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 224 IVSPDIYTYNGVMDAYGKR-----------------------------------GMIREM 248
V P YTY +D YGK G RE
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
+ + +K PD +T+N+++ Y K + D+ ++ ++ + +P + NS++
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK 368
KA D+A +F +M EM P+ VT+ +L+ G + +A ELF+G+V+
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
T N + D C N+ A + + + +PD TY +
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L GK + +F+ M K+ D YS L+ + G+ + F E++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
+G PD YN +I+ K+ L +AL F +MK P++ TYN ++ A
Sbjct: 990 SGLNPDVVCYNLIING----LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G VE+ ++ ++ + + P+++T+N ++ Y G A+ M + P+ T+
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 268 NLL 270
L
Sbjct: 1106 EQL 1108
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 143/274 (52%), Gaps = 15/274 (5%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y +++ + K+G LA+ L ++M + + ++N++I S K
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID----SLCKY 271
Query: 172 KALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
+ + A+ F +M KG+ +PN+VTYN ++ G+ + L ++ E ++P++
Sbjct: 272 RHVEVAVDLFTEMETKGI---RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
T+N ++DA+ K G + E E + M PD IT+NLLI+ + + D+ +Q+FK
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI---YMYGF 346
++ P++ T+N+++ + K + + +F++M++ G + VT+ ++I + G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
CD A+ +F +V ++V + T + +L C
Sbjct: 449 CD---SAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 151/329 (45%), Gaps = 45/329 (13%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKTKALAKA 177
+++ +I + K +A+ LF+EM G RP+ YNSLI+ + D ++ L+
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L EK + PN+VT+N ++ AF + GK+ + L +++ + + PD TYN +++
Sbjct: 320 L---EK-----KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + E + M M S C P++ T+N LI+ + K ++ + ++F+ + +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL----------------- 340
+ T+ +++ + +A D A+ VFKQM +T+ L
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 341 -----------IYMY-----GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
I++Y G C K E +D ++ V T N M+ C L
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCK-AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRL 550
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKA 413
QEAD LF++ + LP++ TY L +A
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 13/301 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++KL+S + K + L + L +M+ G D Y+ I+ + L+ AL
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC----RRSQLSLALAVL 141
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + +P+IVT + +L + + ++ +L + E PD +T+ ++
Sbjct: 142 AKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
E A++ +M C+PDL+T+ +++ K+ D + + ++ K ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC----VSKAKELF 357
FN+++ + K R + A ++F +M G P+ VT+ SLI C C S A L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN----CLCNYGRWSDASRLL 316
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++E K+ V T NA++D + EA+ L + + PD TY LL +
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 418 N 418
N
Sbjct: 377 N 377
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV +N +L A A+ K E V SL + + +S D+YTY+ ++ + +R + A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L +M +PD++T + L++ Y ++ + ++ KP TF +++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKV 369
+A + QM + G P VT+ +++ G C + A L + + ++++ V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVV--NGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
N ++D C + A LF + + P+ TY L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
KV+ LF D+ +S P I +N ++ A K + ++ +M++ DL T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+ I+ + ++ Q V +++ +P + T +S++ Y ++ A + QM EM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
GY P T +LI+ + S+A L D +V+ Q + T +++ C A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+L + + ++ + + + + K GI PN
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 13/273 (4%)
Query: 107 RWMQKQRWY--MADNG------VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
RWM ++ M G ++ LI+ + +KG A+ + +M GC+P++ YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
L LH K K + +A+ Y E+M C P+IVTYN +L A + GKVE +
Sbjct: 384 PL----LHGFCKEKKMDRAIEYLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
L SP + TYN V+D K G + +L M++ KPD IT++ L+ ++
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ D+ + F R +P+ TFNS++L K+R D+A + M G P+ ++
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
LI + +A EL + L + K S
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 6/329 (1%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
+ L K +EV M ++ Y D Y+ LI + AM L EMR+
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
GC PD YN L++ K L +A+ + M C+PN++T+NIILR+ G
Sbjct: 269 GCTPDVVTYNVLVNGIC----KEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTG 323
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ L D+ SP + T+N +++ ++G++ +L +M + C+P+ +++N
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
L+ + K+++ D+ + + ++ P + T+N+M+ K + A + Q++
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
G +P +T+ ++I KA +L D + ++ T ++++ EA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKA 417
F + + P+A T+ + K+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 18/332 (5%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F LGK K LE+ + D Y+ +IS K G+ A+ + M +
Sbjct: 147 FCRLGKTRKAAKILEILEG----SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER-CKPNIVTYNIILRAFAQAG 208
PD YN++ L S + L +A+ ++M ++R C P+++TY I++ A +
Sbjct: 202 --PDVVTYNTI----LRSLCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDS 253
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
V L ++ + +PD+ TYN +++ K G + E L M S+ C+P++IT N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+++ S ++ E++ +LR PS+ TFN ++ + L +A ++ ++M +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 329 GYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
G P+ +++ L ++GFC + +A E + +V + T N ML C + +
Sbjct: 374 GCQPNSLSYNPL--LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+A + + S P TY + KA
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 104 EVFRWMQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E F++++ ++ + D + LI + G+TR A + + +G PD YN +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
S + K + AL ++M P++VTYN ILR+ +GK++Q + +
Sbjct: 180 SGYC----KAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ PD+ TY +++A + + +L M+ C PD++T+N+L++ K+ + D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + + S +P++ T N ++ + AE + M G++PS VT LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+ +A ++ + + + Q + N +L +C A +R S
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 402 PDASTYKLLYKAYTK 416
PD TY + A K
Sbjct: 412 PDIVTYNTMLTALCK 426
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 8/249 (3%)
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
HL +T L + + E M P+I+ ++R F + GK + + + L+ S
Sbjct: 108 HLRQMVRTGELEEGFKFLENMV-YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
PD+ TYN ++ Y K G I ++L RM + PD++T+N ++ S + +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQA 223
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+V +L+ P + T+ ++ + A + +M + G P VT+ L+
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV-- 281
Query: 344 YGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
G C + +A + + + S Q V T N +L C +A+ L
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 402 PDASTYKLL 410
P T+ +L
Sbjct: 342 PSVVTFNIL 350
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 181/400 (45%), Gaps = 10/400 (2%)
Query: 20 GSNAPRSAPPTRISFGSIPTRPKRKKTNDDDSETRELVRLLTR-KISDKEPLERTLNKYV 78
G+N P + FG P + ND+++ L L + K++D L + ++
Sbjct: 78 GTNLRARVKPMK-QFGLSSDGPITE--NDEETNNEILHNLCSNGKLTDACKLVEVMARHN 134
Query: 79 RLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLA 138
++ C L L + D+ + + R M + D Y+ +I + KKG R A
Sbjct: 135 QVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG-VPDTITYNMIIGNLCKKGHIRTA 193
Query: 139 MWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYN 198
+ L +M +G PD YN++I + +A+ F K + C P ++TY
Sbjct: 194 LVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR-----FWKDQLQNGCPPFMITYT 248
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
+++ + + + +D+ PDI TYN +++ +RG + E+ +++ + S+
Sbjct: 249 VLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH 308
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+ + +T+N L+ S + +D++E++ + ++ P++ T+N ++ KARL +A
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRA 368
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
+ F QM E P VT+ +++ V A EL L + + T N+++D
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
L ++A L+ + + PD T + L + +AN
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+EV M + Y D Y+ L++ ++G + + + G +T YN+L
Sbjct: 264 IEVLEDMAVEGCY-PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL-- 320
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
LHS + + M C P ++TYNI++ +A + + F + E
Sbjct: 321 --LHSLCSHEYWDEVEEILNIMYQTSYC-PTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
PDI TYN V+ A K GM+ + +L +K+ C P LIT+N +ID KK K
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+++ +L + P T S++ + +A L ++A V K+ + G T+ +I
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI- 496
Query: 343 MYGFC 347
G C
Sbjct: 497 -QGLC 500
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
+ + M T P YN LI+ K + L++A+ +F +M ++C P+IVTYN +
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLC----KARLLSRAIDFFYQMLE-QKCLPDIVTYNTV 390
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
L A ++ G V+ L L + P + TYN V+D K+G++++ + +M
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 261 KPDLIT-----------------------------------FNLLIDSYGKKQQFDKMEQ 285
PD IT + L+I KK++ + +
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIE 510
Query: 286 VFKSLLRSKEKPSLPTFNSMV 306
V + +L KP + ++V
Sbjct: 511 VVEIMLTGGCKPDETIYTAIV 531
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Query: 133 GQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKP 192
G+ A+ LF M GC D + +N+++ K+K + KA F ++G R
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC----KSKRVEKAYELFRALRG--RFSV 193
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
+ VTYN+IL + + + + K++ E ++P++ TYN ++ + + G IR
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA 312
MK C+ D++T+ ++ +G + + VF ++R PS+ T+N+M+ K
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK- 312
Query: 313 RLKDKAEN---VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
KD EN +F++M GY P+ T+ LI S+ +EL + +
Sbjct: 313 --KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
T N M+ Y + ++A LF++ S LP+ TY +L
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 14/289 (4%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
+ GK DK +++F M + + D ++ ++ V+ K + A LF +R
Sbjct: 136 YASAGKPDK---AVKLFLNMHEHGCFQ-DLASFNTILDVLCKSKRVEKAYELFRALRGR- 190
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM-ER-CKPNIVTYNIILRAFAQA 207
DT YN +++ + KAL E +K M ER PN+ TYN +L+ F +A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKAL-------EVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G++ F ++ + D+ TY V+ +G G I+ + M P + T+
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
N +I KK + +F+ ++R +P++ T+N ++ A + E + ++M
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 328 MGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
G P+F T+ +I Y C V KA LF+ + + T N ++
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
I+A LH +L +M+ + R P+ T+ I+ +A AGK ++ LF ++
Sbjct: 100 IAARLHLHPTVWSL------IHRMRSL-RIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E D+ ++N ++D K + E L R + D +T+N++++ + ++
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRV-EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRT 211
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
K +V K ++ P+L T+N+M+ + +A A F +M + VT+ ++
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
++ +G + +A+ +FD ++ V V+T NAM+ V C + + A +F+
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P+ +TY +L + A G PN
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+R D Y+ ++ G G+ + A +F EM G P + YN++I L +D
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV-LCKKDN 315
Query: 171 TKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+ A+ FE+M +G E PN+ TYN+++R AG+ + L + ++ P+
Sbjct: 316 VE---NAVVMFEEMVRRGYE---PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM----E 284
TYN ++ Y + + + + +M S C P+L T+N+LI +++ + M
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGN 429
Query: 285 QVF-KSLLRSKEK 296
Q F K +LR + K
Sbjct: 430 QAFAKEILRLQSK 442
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M NGV ++ L++V + G A LF EM N D YN+L+ A
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC---- 385
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K + A +M ++R PN+V+Y+ ++ FA+AG+ ++ +LF ++ ++ D
Sbjct: 386 KGGQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+YN ++ Y K G E +L M S K D++T+N L+ YGK+ ++D++++VF
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ R P+L T+++++ Y K L +A +F++ G V + +LI
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
V A L D + + + V T N+++D +
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 39/332 (11%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+S LIS G+ G A+ +F+ M+ G RP+ YN++I A + K +AK +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK---F 326
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F++M+ +P+ +T+N +L ++ G E +LF ++ + D+++YN ++DA
Sbjct: 327 FDEMQ-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF------------- 287
K G + +L +M + P++++++ +ID + K +FD+ +F
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 288 --KSLL-------RSKE-------------KPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
+LL RS+E K + T+N+++ YGK D+ + VF +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
P+ +T+ +LI Y +A E+F + ++ V +A++D C N L
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
A SL + P+ TY + A+ ++
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 157/345 (45%), Gaps = 33/345 (9%)
Query: 99 WLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
W +F M +R D Y+ L+ + K GQ LA + ++M P+ Y+
Sbjct: 355 WEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
++I K +AL F +M+ + + V+YN +L + + G+ E+ + +
Sbjct: 414 TVIDGFA----KAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
++ + D+ TYN ++ YGK+G E++ + T MK P+L+T++ LID Y K
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ + ++F+ + + + +++++ K L A ++ +MT+ G +P+ VT+
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD------VYCINNLPQEADS-- 390
S+I +G + ++ + +G + S L+A+ + + L E+++
Sbjct: 589 SIIDAFGRSATMDRSADYSNG---GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRT 645
Query: 391 ----------------LFQRARSIKVLPDASTYKLLYKAYTKANS 419
+F++ +++ P+ T+ + A ++ NS
Sbjct: 646 TKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNS 690
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 176 KALGYFE-KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
KA+G++E +K R + ++ + GKV +F+ +Y ++
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK-KQQFDKMEQVFKSLLRS 293
++ AYG+ G+ E ++ MK +P+L+T+N +ID+ GK +F ++ + F + R+
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
+P TFNS++ + L + A N+F +MT ++ +L+ + A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
E+ + ++ V + + ++D + EA +LF R + + D +Y L
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 414 YTK 416
YTK
Sbjct: 454 YTK 456
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L GK K+ +VF M+++ + + YS LI K G + AM +F E ++
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G R D +Y++LI A K + A+ ++M E PN+VTYN I+ AF ++
Sbjct: 544 GLRADVVLYSALIDALC----KNGLVGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSA 598
Query: 209 KVEQV----NSLFKDLDESIVSPDIYTY-NGVMDAYGK--------------RGMIREME 249
+++ N S +S T N V+ +G+ GM +E+
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM-QELS 657
Query: 250 AMLT---RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
+L +M + KP+++TF+ ++++ + F+ + + L
Sbjct: 658 CILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 15/301 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ LI + K G+ +A+ L +EM G D YN+L++ +S + A A+ L
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA-ARMLR- 235
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+ MK P++VT+ ++ F + G +++ L+K++ +S V P+ TYN +++
Sbjct: 236 -DMMK--RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G + + + M S C P+++T+N LI + K + D+ ++F+ + +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 301 TFNSMVLNY---GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKE 355
T+N+++ Y GK R+ A ++F M P +TH I ++G C + A
Sbjct: 353 TYNTLIHGYCQVGKLRV---ALDIFCWMVSRRVTPDIITH--CILLHGLCVNGEIESALV 407
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
FD + ES+ I + N M+ C + ++A LF R V PDA TY ++
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 416 K 416
K
Sbjct: 468 K 468
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 37/374 (9%)
Query: 61 TRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCL----------------- 103
R SD RT ++ +R E F LF E+ H + LP +
Sbjct: 32 ARAFSDYREKLRT--GFLHSIRFEDAFALFFEM-VHSQPLPSIVDFTRLLTATANLRRYE 88
Query: 104 EVFRWMQKQRWYMADNGVYS--KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
V + QK Y + +YS LI + + A+ + +M G P + SL
Sbjct: 89 TVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL- 147
Query: 162 SAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
LH + A M G E PN+V YN ++ + G++ L +
Sbjct: 148 ---LHGFCLVNRIGDAFSLVILMVKSGYE---PNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+++ + D+ TYN ++ G + ML M PD++TF LID + K+
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG-KARLKDKAENVFKQMTEMGYAPSFVTHE 338
D+ ++++K +++S P+ T+NS++ RL D A+ F M G P+ VT+
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYN 320
Query: 339 SLIYMYGFCD--CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+LI GFC V + +LF + + T N ++ YC + A +F
Sbjct: 321 TLI--SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 397 SIKVLPDASTYKLL 410
S +V PD T+ +L
Sbjct: 379 SRRVTPDIITHCIL 392
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 10/260 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L +W + R M K R D ++ LI V K+G A L+ EM +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 149 GCRPDTSVYNSLISA-HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
P+ YNS+I+ +H R L A F+ M + C PN+VTYN ++ F +
Sbjct: 276 SVDPNNVTYNSIINGLCMHGR-----LYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKF 329
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
V++ LF+ + + DI+TYN ++ Y + G +R + M S + PD+IT
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
+L+ + + F + S++ + +N M+ KA +KA +F ++
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 328 MGYAPSFVTHESLIYMYGFC 347
G P T+ I + G C
Sbjct: 450 EGVKPDARTYT--IMILGLC 467
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
+N Y+ +I+ + G+ A F M + GC P+ YN+LIS K + + +
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC----KFRMVDEG 335
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ F++M E +I TYN ++ + Q GK+ +F + V+PDI T+ ++
Sbjct: 336 MKLFQRMS-CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
G I M+ ++ ++ +N++I K + +K ++F L KP
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
T+ M+L K + +A+ + ++M E G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/279 (17%), Positives = 119/279 (42%), Gaps = 5/279 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A LF EM ++ P + L++A + R + YF + + ++ ++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVI-----YFSQKMELYGISHDLYSF 109
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++ F + ++ S+ + + P I T+ ++ + I + +++ M
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+ +P+++ +N LID K + + ++ + + + T+N+++ +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
A + + M + P VT +LI ++ + +A+EL+ +++S V T N++++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
C++ +A F S P+ TY L + K
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 152/328 (46%), Gaps = 17/328 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ +I+ + K A+ +F M G R D YN+LIS +S T A A+ L
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA-ARLLRD 244
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
K K PN++ + ++ F + G + + +L+K++ V P+++TYN +++ +
Sbjct: 245 MVKRK----IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G + + + M M S C PD++T+N LI + K ++ + ++F +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC------VSKAK 354
T+N+++ Y +A + A+ VF +M + G +P VT+ L+ DC + KA
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL------DCLCNNGKIEKAL 414
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ + L +S++ + + T N ++ C + +EA LF+ V PDA Y +
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 415 TKANSXXXXXXXXXXXXXXGIIPNKRFF 442
+ G +P++R +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 141/319 (44%), Gaps = 9/319 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++++++V+ K + + ++L+ +M N G D + LI H + L+ AL
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI----HCFCRCSRLSLALALL 137
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + +P+IVT +L F Q + ++ SL +D P++ YN V++ K
Sbjct: 138 GKMMKLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + M+ + D +T+N LI ++ ++ + +++ K P++
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDG 359
F +++ + K +A N++K+M P+ T+ SLI GFC C+ AK +FD
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI--NGFCIHGCLGDAKYMFDL 314
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+V V T N ++ +C + ++ LF ++ DA TY L Y +A
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 420 XXXXXXXXXXXXXXGIIPN 438
G+ P+
Sbjct: 375 LNVAQKVFNRMVDCGVSPD 393
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ L M G P+ +YN++I+ +RD AL + Y + KG+ + + VTY
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE--VFYCMEKKGI---RADAVTY 222
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
N ++ + +G+ L +D+ + + P++ + ++D + K G + E + M
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
P++ T+N LI+ + + +F ++ P + T+N+++ + K++ +
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
+F +MT G T+ +LI+ Y ++ A+++F+ +V+ V + T N +LD
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
C N ++A + + + ++ D TY ++ + + +
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV--YSKLISVMGKKGQTRLAMWLFSEMR 146
L L +W + R M K++ D V ++ LI K+G A L+ EM
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 147 NTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
P+ YNSLI+ +H L A F+ M + C P++VTYN ++ F
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHG-----CLGDAKYMFDLMVS-KGCFPDVVTYNTLITGFC 335
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++ +VE LF ++ + D +TYN ++ Y + G + + + RM PD++
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T+N+L+D + +K + + L +S+ + T+N ++ + +A +F+ +
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 326 TEMGYAPSFVTHESLIYMYGFC 347
T G P + + ++I G C
Sbjct: 456 TRKGVKPDAIAYITMI--SGLC 475
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 17/274 (6%)
Query: 143 SEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILR 202
+M G RP SL++ +A+ + M G PN+V YN ++
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQG----NRFQEAVSLVDSMDGFGFV-PNVVIYNTVIN 192
Query: 203 AFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP 262
+ + +F +++ + D TYN ++ G + +L M + P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
++I F LID++ K+ + ++K ++R P++ T+NS++ + A+ +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL---VESKVQIKVS---TLNAML 376
M G P VT+ +LI GFC K+K + DG+ E Q V T N ++
Sbjct: 313 DLMVSKGCFPDVVTYNTLI--TGFC----KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
YC A +F R V PD TY +L
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 9/274 (3%)
Query: 149 GCRPDTSVYNSLISA--HLHSRDKTK------ALAKALGYFEKMKGMERCKPNIVTYNII 200
G P+TS+ S A H H R++ + A F +M R P+IV + +
Sbjct: 27 GNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEML-QSRPIPSIVDFTRV 85
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
L A+ K + V L+ ++ +S D+Y++ ++ + + + A+L +M
Sbjct: 86 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 145
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+P ++T L++ + + +F + + S+ P++ +N+++ K R + A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
VF M + G VT+ +LI + A L +V+ K+ V A++D +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
EA +L++ V+P+ TY L +
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D Y+ +I + K + A F E+ G RP+ Y +L++ +S + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA- 244
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
A+ L K ++ PN++TY+ +L AF + GKV + LF+++ + PDI TY+
Sbjct: 245 ARLLSDMIK----KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
+++ I E M M S C D++++N LI+ + K ++ + ++F+ + +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSK 352
+ T+N+++ + +A DKA+ F QM G +P T+ I + G CD + K
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN--ILLGGLCDNGELEK 418
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
A +F+ + + ++ + + T ++ C +EA SLF + PD TY
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D L++ ++ + A+ L +M G +PD YN++I S KTK +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII----DSLCKTKRV 206
Query: 175 AKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
A +F+++ KG+ +PN+VTY ++ + + L D+ + ++P++ TY
Sbjct: 207 NDAFDFFKEIERKGI---RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++DA+ K G + E + + M PD++T++ LI+ + D+ Q+F ++
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ ++N+++ + KA+ + +F++M++ G + VT+ +LI + V K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A+E F + + + T N +L C N ++A +F+ + ++ D TY + +
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 413 AYTKAN 418
K
Sbjct: 444 GMCKTG 449
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 136/280 (48%), Gaps = 5/280 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ LFS+M + P +N L+SA + + K + +LG ++ G+ + ++ T+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIV--KLKKYDVVISLGKKMEVLGI---RNDLYTF 123
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
NI++ F +V S+ + + PD T +++ + +R + + +++ +M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
KPD++ +N +IDS K ++ + FK + R +P++ T+ ++V +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
A + M + P+ +T+ +L+ + V +AKELF+ +V + + T +++++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
C+++ EA+ +F S L D +Y L + KA
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 103 LEVFRWMQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
+++F M K R + + D +++L+S + K + + + L +M G R D +N +
Sbjct: 70 IDLFSDMVKSRPFPSIVD---FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
I+ + AL+ LG K+ G E P+ VT ++ F + +V SL +
Sbjct: 127 INCFCCCFQVSLALS-ILGKMLKL-GYE---PDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E PDI YN ++D+ K + + ++ +P+++T+ L++ ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
++ +++ K P++ T+++++ + K +A+ +F++M M P VT+ SL
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I D + +A ++FD +V V + N +++ +C ++ LF+ +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ + TY L + + +A GI P+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 10/243 (4%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L + K+ K L E+F M + D YS LI+ + + A +F M +
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQ 206
GC D YN+LI+ K K + + F +M +G+ N VTYN +++ F Q
Sbjct: 325 GCLADVVSYNTLINGFC----KAKRVEDGMKLFREMSQRGLV---SNTVTYNTLIQGFFQ 377
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
AG V++ F +D +SPDI+TYN ++ G + + + M+ + D++T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ +I K + ++ +F SL KP + T+ +M+ L + E ++ +M
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 327 EMG 329
+ G
Sbjct: 498 QEG 500
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALGY 180
YS L+ K G+ A LF EM PD Y+SLI+ LH R + +A
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR-----IDEANQM 317
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F+ M + C ++V+YN ++ F +A +VE LF+++ + + + TYN ++ +
Sbjct: 318 FDLMVS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ G + + + ++M PD+ T+N+L+ + +K +F+ + + + +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
T+ +++ K ++A ++F ++ G P VT+ ++ M G C
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM--MSGLC 481
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K+ LF D+ +S P I +N ++ A K + ++ +M+ + DL TFN
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
++I+ + Q + +L+ +P T S+V + + A ++ +M E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
GY P V + ++I V+ A + F + ++ V T A+++ C ++ +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTK 416
L K+ P+ TY L A+ K
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVK 272
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D +++ +I+ + G AM +F +M+ +GC+P S +N+LI + K L ++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY----GKIGKLEES 443
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ M E +PN T NI+++A+ K+E+ ++ + V PD+ T+N +
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 238 AYGKRGMIREMEAMLT-RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE- 295
AY + G E M+ RM N+ KP++ T +++ Y ++ KME+ + R KE
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMKEL 560
Query: 296 --KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
P+L FNS++ + D V M E G P VT +L+ + + +
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+E++ ++E + + + + Y P++A+ + + R V P+ Y +
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 414 YTKAN 418
+ A
Sbjct: 681 WCSAG 685
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 188 ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIRE 247
E KP+++TY ++ A + + SL ++++ + PD +N +++A + G + +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMV 306
+ +MK + CKP TFN LI YGK + ++ ++ +LR + +P+ T N +V
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 307 LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE-LFDGLVESKV 365
+ R ++A N+ +M G P VT +L Y A++ + ++ +KV
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 366 QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXX 425
+ V T +++ YC +EA F R + + V P+ + L K + N
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 426 XXXXXXXXGIIPNKRFF 442
G+ P+ F
Sbjct: 588 VVDLMEEFGVKPDVVTF 604
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 144 EMRNTGCRPDTSVYNSLISAH-----------------LHSRDKTKA------------- 173
+M++ G +PD +N+L A+ LH++ K
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 174 --LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ +AL +F +MK + PN+ +N +++ F ++ V + ++E V PD+ T
Sbjct: 545 GKMEEALRFFYRMKEL-GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
++ +M+A+ G ++ E + T M PD+ F++L Y + + +K EQ+ +
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-GYAPSFVTHESLIYMYGFCDCV 350
+ +P++ + ++ + A KA V+K+M + G +P+ T+E+LI+ +G
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 351 SKAKELF 357
KA+EL
Sbjct: 724 WKAEELL 730
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 213 VNSLFKDLDESIVS---------------PDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
V ++FKD +E V D+ + +M+ +RG +E ++ +
Sbjct: 288 VEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIE 347
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
KP LIT+ L+ + +++ F + + + ++ KP FN+++ ++ D+
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK-VQIKVSTLNAML 376
A +F++M E G P+ T +LI YG + ++ L D ++ + +Q T N ++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+C +EA ++ + +S V PD T+ L KAY + S
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D +S L + G+ A + ++MR G RP+ +Y +IS + + + KA
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE----MKKA 690
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ ++KM G+ PN+ TY ++ F +A + + L KD++ V P T + D
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 238 AYGKRGMIREMEA 250
+ G+ +A
Sbjct: 751 GWKSIGVSNSNDA 763
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 155/364 (42%), Gaps = 43/364 (11%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
+E+LG++D + +F M K +Y+ L+ + K G+ A+ LF EM+ G
Sbjct: 243 YEKLGRNDS---AIRLFDEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM------------------------- 184
C P Y LI K + +A G+++ M
Sbjct: 299 CSPTVYTYTELIKG----LGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 185 ---------KGMERCKPNIVTYNIILRA-FAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
GM RC P +V+YN +++A F V +V+S F + VSP +TY+
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D Y K + + +L M P + LI++ GK ++++ ++FK L +
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
S + M+ ++GK +A ++F +M G P + +L+ +++A
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
L + E+ + +++ N +L+ + +P+ A +F+ + + PD TY L +
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 415 TKAN 418
A
Sbjct: 595 AHAG 598
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 6/318 (1%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++ F+W K+R + D Y LI + + RL ++ ++ SV +++S
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLE---EARLYGEMYRTIQEVVRNTYVSVSPAVLS 166
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL-D 221
+ + + K ++KAL F + KG +CKP TYN ++ Q G+ E+V+ ++ ++ +
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
E PD TY+ ++ +Y K G + MK N +P + L+ Y K + +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
K +F+ + R+ P++ T+ ++ GKA D+A +K M G P V +L+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD-VYCINNLPQEADSLFQRARSIKV 400
+ G V + +F + + V + N ++ ++ E S F + ++ V
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 401 LPDASTYKLLYKAYTKAN 418
P TY +L Y K N
Sbjct: 406 SPSEFTYSILIDGYCKTN 423
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 8/318 (2%)
Query: 104 EVFRWMQ---KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
E++R +Q + + V S+L+ +G+ A+ +F + + C+P +S YNS+
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
I + K + +M C P+ +TY+ ++ ++ + G+ + LF ++
Sbjct: 204 ILMLMQEGQHEKVHE----VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
++ + P Y ++ Y K G + + + MK C P + T+ LI GK +
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
D+ +K +LR P + N+++ GK ++ NVF +M P+ V++ ++
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 341 I-YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
I ++ VS+ FD + V T + ++D YC N ++A L +
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 400 VLPDASTYKLLYKAYTKA 417
P + Y L A KA
Sbjct: 440 FPPCPAAYCSLINALGKA 457
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 104 EVFRWMQKQRWYMADNG-----VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
EV W K + AD+ YS LI K + A+ L EM G P + Y
Sbjct: 392 EVSSWFDKMK---ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIV-----TYNIILRAFAQAGKVEQV 213
SLI+A L KA Y + + K N Y ++++ F + GK+ +
Sbjct: 449 SLINA----------LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
LF ++ PD+Y YN +M K GMI E ++L +M+ N C+ D+ + N++++
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
+ + + ++F+++ S KP T+N+++ + A + ++A + ++M + G+
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 334 FVTHESLIYMYGFCD 348
+T+ S++ G D
Sbjct: 619 AITYSSILDAVGNVD 633
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 130/289 (44%), Gaps = 4/289 (1%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
L++++GK G+ +FSEM C P YN++I A S+ ++ +F+KM
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS---SWFDKM 400
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
K + P+ TY+I++ + + +VE+ L +++DE P Y +++A GK
Sbjct: 401 KA-DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ +K N + ++I +GK + + +F + P + +N+
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK 364
++ KA + ++A ++ ++M E G +H ++ + +A E+F+ + S
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++ T N +L + + +EA + + + DA TY + A
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+++F +M G +P+ +YN++I K+K + AL +M+ + P++VTY
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLC----KSKQVDNALDLLNRMEK-DGIGPDVVTY 224
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
N ++ +G+ + + + + PD++T+N ++DA K G + E E M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD++T++LLI + D+ E++F ++ P + T++ ++ Y K++ +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
+F +M++ G + VT+ LI Y ++ A+E+F +V V + T N +L
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIP 437
C N ++A + + + D TY ++ + KA G++P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 438 N 438
+
Sbjct: 465 D 465
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 6/307 (1%)
Query: 105 VFRWMQKQRWYMADN-GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
++ W Q Q + N + L++ + Q LA+ +M G P + SL++
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
+ + AL F++M GM KPN+V YN I+ ++ +V+ L +++
Sbjct: 161 FC----RGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ PD+ TYN ++ G + M++ M + PD+ TFN LID+ K+ + +
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
E+ ++ ++R P + T++ ++ D+AE +F M G P VT+ LI
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
Y V +LF + + V T ++ YC A+ +F+R V P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 404 ASTYKLL 410
TY +L
Sbjct: 396 IITYNVL 402
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 144/320 (45%), Gaps = 44/320 (13%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ +I + K Q A+ L + M G PD YNSLIS L S + + +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG-LCSSGRWSDATRMVSC 246
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
K P++ T+N ++ A + G+V + ++++ + PDI TY+ ++
Sbjct: 247 MTK----REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ E E M M S C PD++T+++LI+ Y K ++ + ++F + + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFD 358
T+ ++ Y +A + AE +F++M G P+ +T+ L ++G CD + KA +
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL--LHGLCDNGKIEKALVILA 420
Query: 359 GLVESKVQIKVSTLNAML-------------DVYCINN---------------------- 383
+ ++ + + T N ++ D+YC N
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 384 LPQEADSLFQRARSIKVLPD 403
L +EAD+LF++ + +LP+
Sbjct: 481 LRREADALFRKMKEDGILPN 500
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 5/317 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+S+L+S + K + + ++L+ +M+ G + N L++ + L+ AL +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC----RCSQLSLALSFL 139
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + +P+IVT+ +L F + +V +F + P++ YN ++D K
Sbjct: 140 GKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ +L RM+ + PD++T+N LI ++ ++ + + + P + T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
FN+++ K +AE +++M P VT+ LIY + +A+E+F +V
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXX 421
V T + +++ YC + + LF V+ + TY +L + Y +A
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 422 XXXXXXXXXXXXGIIPN 438
G+ PN
Sbjct: 379 VAEEIFRRMVFCGVHPN 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 8/254 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L +W + M K+ Y D ++ LI K+G+ A + EM
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 149 GCRPDTSVYNSLI-SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
PD Y+ LI ++SR A+ + F KG C P++VTY+I++ + ++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDE---AEEMFGFMVSKG---CFPDVVTYSILINGYCKS 339
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
KVE LF ++ + V + TY ++ Y + G + E + RM P++IT+
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
N+L+ + +K + + ++ + T+N ++ KA A +++ +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 328 MGYAPSFVTHESLI 341
G P T+ +++
Sbjct: 460 QGLMPDIWTYTTMM 473
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 187 MERCKP--NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
M +C+P +I ++ +L A ++ K + V L++ + + ++ T N +++ + +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ + L +M +P ++TF L++ + + + +F ++ KP++ +N+
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVE 362
++ K++ D A ++ +M + G P VT+ SLI G C S A + + +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI--SGLCSSGRWSDATRMVSCMTK 249
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
++ V T NA++D EA+ ++ + PD TY LL
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 25/347 (7%)
Query: 74 LNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKG 133
LN V+L R E LF+E H ++ C D ++ LI + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDE---HLRFQSC--------------NDTKTFNILIRGLCGVG 220
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPN 193
+ A+ L M GC PD YN+LI K+ L KA F+ +K C P+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFC----KSNELNKASEMFKDVKSGSVCSPD 276
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+VTY ++ + +AGK+ + +SL D+ + P T+N ++D Y K G + E +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
+M S C PD++TF LID Y + Q + ++++ + P+ T++ ++
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVST 371
KA + Q+ P + +I GFC V++A + + + + K + T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVI--DGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
++ +C+ EA S+F + +I PD T L KA
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSE-MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
V + L++ + K + AM LF E +R C DT +N LI KAL + LG
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKAL-ELLG 230
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE-SIVSPDIYTYNGVMDA 238
M G C+P+IVTYN +++ F ++ ++ + + +FKD+ S+ SPD+ TY ++
Sbjct: 231 V---MSGF-GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y K G +RE ++L M P +TFN+L+D Y K + E++ ++ P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+ TF S++ Y + + ++++M G P+ T+ LI + + KA+EL
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
L + + N ++D +C EA+ + + K PD T+ +L +
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 8/317 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L + K G LA +F M++ G P+ + L+S+ A A L F
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E +E C + N +L + +VE LF + D T+N ++
Sbjct: 166 E----VEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR-SKEKPSLP 300
G + +L M C+PD++T+N LI + K + +K ++FK + S P +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+ SM+ Y KA +A ++ M +G P+ VT L+ Y + A+E+ +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSX 420
+ V T +++D YC + L++ + + P+A TY +L A N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 421 XXXXXXXXXXXXXGIIP 437
IIP
Sbjct: 399 LKARELLGQLASKDIIP 415
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 119 NGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
N ++ L+ K G+ A + +M + GC PD + SLI + + +++
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC----RVGQVSQGF 367
Query: 179 GYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
+E+M +GM PN TY+I++ A ++ + L L + P + YN V+
Sbjct: 368 RLWEEMNARGM---FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D + K G + E ++ M+ +CKPD ITF +LI + K + + +F ++
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
P T +S++ KA + +A ++ Q+ G + + V E+
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLET 526
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TYN++ R+ +AG + +F+ + VSP+ ++ ++ ++G + A+L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+S + + + N L+++ K + + ++F LR + TFN ++
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKV-QIKVSTL 372
+KA + M+ G P VT+ +LI GFC ++KA E+F + V V T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLI--QGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 373 NAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXX 432
+M+ YC +EA SL + + P T+ +L Y KA
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 433 XGIIPN 438
G P+
Sbjct: 341 FGCFPD 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 116/302 (38%), Gaps = 13/302 (4%)
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG--YFEKMKGMERCKPNIVTY 197
W FS + ++ +S + +L +R KA L FE MK + PN
Sbjct: 90 WEFSRFK-------LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKS-DGVSPNNRLL 141
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++ +FA+ GK+ +L L V N +++ K + + +
Sbjct: 142 GFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
Q D TFN+LI + +K ++ + +P + T+N+++ + K+ +K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 318 AENVFKQMTEMGY-APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A +FK + +P VT+ S+I Y + +A L D ++ + T N ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGII 436
D Y A+ + + S PD T+ L Y + G+
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 437 PN 438
PN
Sbjct: 380 PN 381
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 25/347 (7%)
Query: 74 LNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKG 133
LN V+L R E LF+E H ++ C D ++ LI + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDE---HLRFQSC--------------NDTKTFNILIRGLCGVG 220
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPN 193
+ A+ L M GC PD YN+LI K+ L KA F+ +K C P+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFC----KSNELNKASEMFKDVKSGSVCSPD 276
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+VTY ++ + +AGK+ + +SL D+ + P T+N ++D Y K G + E +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
+M S C PD++TF LID Y + Q + ++++ + P+ T++ ++
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVST 371
KA + Q+ P + +I GFC V++A + + + + K + T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVI--DGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
++ +C+ EA S+F + +I PD T L KA
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSE-MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
V + L++ + K + AM LF E +R C DT +N LI KAL + LG
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKAL-ELLG 230
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE-SIVSPDIYTYNGVMDA 238
M G C+P+IVTYN +++ F ++ ++ + + +FKD+ S+ SPD+ TY ++
Sbjct: 231 V---MSGF-GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y K G +RE ++L M P +TFN+L+D Y K + E++ ++ P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+ TF S++ Y + + ++++M G P+ T+ LI + + KA+EL
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
L + + N ++D +C EA+ + + K PD T+ +L +
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 8/317 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L + K G LA +F M++ G P+ + L+S+ A A L F
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E +E C + N +L + +VE LF + D T+N ++
Sbjct: 166 E----VEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR-SKEKPSLP 300
G + +L M C+PD++T+N LI + K + +K ++FK + S P +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+ SM+ Y KA +A ++ M +G P+ VT L+ Y + A+E+ +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSX 420
+ V T +++D YC + L++ + + P+A TY +L A N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 421 XXXXXXXXXXXXXGIIP 437
IIP
Sbjct: 399 LKARELLGQLASKDIIP 415
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 119 NGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
N ++ L+ K G+ A + +M + GC PD + SLI + + +++
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC----RVGQVSQGF 367
Query: 179 GYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
+E+M +GM PN TY+I++ A ++ + L L + P + YN V+
Sbjct: 368 RLWEEMNARGM---FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D + K G + E ++ M+ +CKPD ITF +LI + K + + +F ++
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
P T +S++ KA + +A ++ Q+ G + + V E+
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPLET 526
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TYN++ R+ +AG + +F+ + VSP+ ++ ++ ++G + A+L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+S + + + N L+++ K + + ++F LR + TFN ++
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKV-QIKVSTL 372
+KA + M+ G P VT+ +LI GFC ++KA E+F + V V T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLI--QGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 373 NAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXX 432
+M+ YC +EA SL + + P T+ +L Y KA
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 433 XGIIPN 438
G P+
Sbjct: 341 FGCFPD 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 116/302 (38%), Gaps = 13/302 (4%)
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG--YFEKMKGMERCKPNIVTY 197
W FS + ++ +S + +L +R KA L FE MK + PN
Sbjct: 90 WEFSRFK-------LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKS-DGVSPNNRLL 141
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++ +FA+ GK+ +L L V N +++ K + + +
Sbjct: 142 GFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
Q D TFN+LI + +K ++ + +P + T+N+++ + K+ +K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 318 AENVFKQMTEMGY-APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A +FK + +P VT+ S+I Y + +A L D ++ + T N ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGII 436
D Y A+ + + S PD T+ L Y + G+
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 437 PN 438
PN
Sbjct: 380 PN 381
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 163/366 (44%), Gaps = 19/366 (5%)
Query: 63 KISDKEPLERTLN---------KYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQR 113
K+ + P+E++L+ + RL T + L + GK + +F M K
Sbjct: 278 KVGARNPIEKSLHFASGSDSSPRKPRLTSTFNT--LIDLYGKAGRLNDAANLFSEMLKSG 335
Query: 114 WYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA 173
+ D ++ +I G G A L +M G PDT YN L+S H + D
Sbjct: 336 VPI-DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD---- 390
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
+ AL Y+ K++ + P+ VT+ +L Q V +V ++ ++D + + D ++
Sbjct: 391 IEAALEYYRKIRKV-GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR- 292
+M Y G++ + +A+ R + + C T +ID Y +K + + E VF
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQLD-CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
S ++ + +N M+ YGKA+L +KA ++FK M G P T+ SL M D V +
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A+ + +++S + T AM+ Y L +A L++ V P+ Y L
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 413 AYTKAN 418
+ ++
Sbjct: 629 GFAESG 634
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 99 WLPCLEVF---RWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTS 155
W+ VF R M QR D Y+ +I GK A+ LF M+N G PD
Sbjct: 495 WVEAETVFYGKRNMSGQR---NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDEC 551
Query: 156 VYNSLIS--AHLHSRDKT-KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
YNSL A + D+ + LA+ L CKP TY ++ ++ + G +
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLD--------SGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
L++ ++++ V P+ Y +++ + + GM+ E M+ + + + I LI
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+Y K ++ +V+ + S+ P + NSM+ + +AE++F + E G
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC- 722
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
++ +++Y+Y + +A E+ + + ES + ++ N ++ Y + E LF
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 393 QRAR-SIKVLPDASTYKLLYKAYTKAN 418
K+L D T+K L+ K
Sbjct: 783 HEMLVERKLLLDWGTFKTLFTLLKKGG 809
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 30/377 (7%)
Query: 60 LTRKISDKEPLERTLNKY-VRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMAD 118
+ R + +E TL + L E LL E+ +W L VFR+ Q + Y+ +
Sbjct: 89 ILRSLDSSTDIETTLASLCLNLSPKEQTVLLKEQ----TRWERVLRVFRFFQSHQSYVPN 144
Query: 119 NGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
Y+ ++ +G+ G+ + EM + G P + Y L+ + K + +AL
Sbjct: 145 VIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVY----GKAGLVKEAL 200
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD-----LDESIVSPDIYTYN 233
+ + M G P+ VT ++R F +G+ ++ + FK +D + S D + N
Sbjct: 201 LWIKHM-GQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKN 259
Query: 234 GVMDA--------------YGKRGMIREMEAMLTRMKSNQCKPDLI-TFNLLIDSYGKKQ 278
G + G R I + + S+ KP L TFN LID YGK
Sbjct: 260 GSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAG 319
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ + +F +L+S TFN+M+ G +AE++ K+M E G +P T+
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
L+ ++ + A E + + + + T A+L + C + E +++
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 399 KVLPDASTYKLLYKAYT 415
+ D + ++ + Y
Sbjct: 440 SIRIDEHSVPVIMQMYV 456
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 17/335 (5%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWL--FSEMRNTGCRPDTSVYNSLISAHLHSR 168
+Q Y +D YS +I + + + M L + E+ D + N +I S
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
D +KAL + LG + G+ +V+ I+ A A +G+ + +LF++L +S + P
Sbjct: 284 DPSKAL-QLLG-MAQATGLSAKTATLVS---IISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
YN ++ Y K G +++ E+M++ M+ PD T++LLID+Y +++ V K
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAE-----NVFKQMTEMGYAPSFVTHESLIYM 343
+ +P NS V + A +D+ E V K+M +G P + +I
Sbjct: 399 EMEAGDVQP-----NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
+G +C+ A FD ++ ++ T N ++D +C + A+ +F+ LP
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 404 ASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
A+TY ++ +Y GI+PN
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
A +IS + G+T A LF E+R +G +P T YN+L+ ++ KT L
Sbjct: 302 AKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV----KTGPLKD 357
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT----- 231
A +M+ P+ TY++++ A+ AG+ E + K+++ V P+ +
Sbjct: 358 AESMVSEMEK-RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416
Query: 232 ------------------------------YNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
YN V+D +GK + RM S +
Sbjct: 417 AGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
PD +T+N LID + K + E++F+++ R P T+N M+ +YG D + +
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
+M G P+ VTH +L+ +YG + A E + + ++ + NA+++ Y
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
L ++A + F+ S + P L A+
Sbjct: 597 RGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
++R D YS LI G+ A + EM +P++ V++ L++ RD+
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF---RDR 422
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
+ K ++MK + KP+ YN+++ F + ++ + F + + PD
Sbjct: 423 GE-WQKTFQVLKEMKSIG-VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
T+N ++D + K G E M M+ C P T+N++I+SYG ++++D M+++ +
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM 540
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV 350
P++ T ++V YGK+ + A ++M +G PS + +LI Y
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS 600
Query: 351 SKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+A F + ++ + LN++++ + + EA ++ Q + V PD TY L
Sbjct: 601 EQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 411 YKAYTKAN 418
KA + +
Sbjct: 661 MKALIRVD 668
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 12/269 (4%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
+W +V + M K D Y+ +I GK AM F M + G PD +
Sbjct: 424 EWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Query: 158 NSLISAHL-HSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRAFAQAGKVEQVN 214
N+LI H H R E + MER C P TYNI++ ++ + + +
Sbjct: 483 NTLIDCHCKHGRHIVAE--------EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
L + + P++ T+ ++D YGK G + L MKS KP +N LI++Y
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
++ ++ F+ + KPSL NS++ +G+ R +A V + M E G P
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVES 363
VT+ +L+ D K +++ ++ S
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D ++ LI K G+ +A +F M GC P + YN +I+++ +++ + +
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY-GDQERWDDMKRL 536
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
LG KMK + PN+VT+ ++ + ++G+ +++ + P YN +++
Sbjct: 537 LG---KMKS-QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
AY +RG+ + M S+ KP L+ N LI+++G+ ++ + V + + + KP
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+ T+ +++ + K V+++M G P
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 31/272 (11%)
Query: 36 SIPTRPKRK----------KTNDDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTEH 85
SI +P R+ K N D R+L+ I EP T N + H
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI---EPDRVTWNTLIDC----H 489
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
C KH + + E+F M++ R + Y+ +I+ G + + L +M
Sbjct: 490 C--------KHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSYGDQERWDDMKRLLGKM 540
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
++ G P+ + +L+ + K+ A+ E+MK + KP+ YN ++ A+A
Sbjct: 541 KSQGILPNVVTHTTLVDVY----GKSGRFNDAIECLEEMKSVG-LKPSSTMYNALINAYA 595
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
Q G EQ + F+ + + P + N +++A+G+ E A+L MK N KPD++
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
T+ L+ + + +F K+ V++ ++ S KP
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 76 KYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWM-----QKQRW--------YMADNGV- 121
K+ R + E F E G LPC + M ++RW M G+
Sbjct: 491 KHGRHIVAEEMFEAMERRG----CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 122 -----YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA- 175
++ L+ V GK G+ A+ EM++ G +P +++YN+LI+A+ + L+
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ-----RGLSE 601
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+A+ F M + KP+++ N ++ AF + + + ++ + + E+ V PD+ TY +
Sbjct: 602 QAVNAFRVMTS-DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPD 263
M A + +++ + M + CKPD
Sbjct: 661 MKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 148/328 (45%), Gaps = 5/328 (1%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+++ D Y+ LI+ K + A + MR+ PDT YN +I + L SR K
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS-LCSRGKL 209
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
K L + C+P ++TY I++ A G V++ L ++ + PD++T
Sbjct: 210 DLALKVLNQLLS----DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
YN ++ K GM+ M+ ++ C+PD+I++N+L+ + + ++++ E++ +
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVS 351
K P++ T++ ++ + ++A N+ K M E G P +++ LI + +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLY 411
A E + ++ + N +L C N +A +F + + P++S+Y ++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 412 KAYTKANSXXXXXXXXXXXXXXGIIPNK 439
A + GI P++
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDE 473
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 21/319 (6%)
Query: 104 EVFRWMQK--QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E + M + R D Y+ +I M K+G A + + GC PD YN L+
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 162 SAHLHS---RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
A L+ + K + K E+C PN+VTY+I++ + GK+E+ +L K
Sbjct: 306 RALLNQGKWEEGEKLMTKMFS--------EKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+ E ++PD Y+Y+ ++ A+ + G + L M S+ C PD++ +N ++ + K
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ D+ ++F L P+ ++N+M + K +A ++ +M G P +T+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 339 SLIYMYGFCDC----VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
S+I C C V +A EL + + V T N +L +C + ++A ++ +
Sbjct: 478 SMIS----CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 395 ARSIKVLPDASTYKLLYKA 413
P+ +TY +L +
Sbjct: 534 MVGNGCRPNETTYTVLIEG 552
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI+ + + G+ AM L M+ G PD Y+ LI+A + L A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC----REGRLDVAIEFL 391
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E M + C P+IV YN +L + GK +Q +F L E SP+ +YN + A
Sbjct: 392 ETMIS-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 242 RG-MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G IR + M+ M SN PD IT+N +I ++ D+ ++ + + PS+
Sbjct: 451 SGDKIRALH-MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+N ++L + KA + A NV + M G P+ T+ LI GF ++A EL + L
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 361 V 361
V
Sbjct: 570 V 570
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 9/320 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI +G A+ L EM + G +PD YN++I +A F
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA-------F 283
Query: 182 EKMKGME--RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
E ++ +E C+P++++YNI+LRA GK E+ L + P++ TY+ ++
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G I E +L MK PD +++ LI ++ ++ + D + ++++ P +
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+N+++ K D+A +F ++ E+G +P+ ++ ++ +A +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
++ + + T N+M+ C + EA L RS + P TY ++ + KA+
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 420 XXXXXXXXXXXXXXGIIPNK 439
G PN+
Sbjct: 524 IEDAINVLESMVGNGCRPNE 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L L + K + + + M K++ D Y LI+ ++G+ +A+ M +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLM-KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
GC PD YN++++ K +AL F K+ G C PN +YN + A +
Sbjct: 397 DGCLPDIVNYNTVLATLC----KNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSS 451
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G + + ++ + + PD TYN ++ + GM+ E +L M+S + P ++T+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
N+++ + K + + V +S++ + +P+ T+ ++ G A + +A
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 12/317 (3%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
EV+ D+ Y+ LI+ K G +LA + + G PD Y SLI
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 164 HLHSRDKTKALA---KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
H + +ALA +ALG KG+ KPN++ YN +++ + G + + L ++
Sbjct: 366 LCHEGETNRALALFNEALG-----KGI---KPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E + P++ T+N +++ K G + + + ++ M S PD+ TFN+LI Y + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+ ++ +L + P + T+NS++ K + +K M E G AP+ T L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR-ARSIK 399
+ + +A L + + V T ++D +C N A +LF++ + K
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 400 VLPDASTYKLLYKAYTK 416
V TY ++ A+T+
Sbjct: 598 VSSSTPTYNIIIHAFTE 614
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 10/327 (3%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
++ D Y LI + +G+T A+ LF+E G +P+ +YN+LI S
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG--LSNQGMILE 409
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
A L KG+ P + T+NI++ + G V + L K + PDI+T+N
Sbjct: 410 AAQLANEMSEKGL---IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ Y + + +L M N PD+ T+N L++ K +F+ + + +K+++
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSK 352
P+L TFN ++ + + R D+A + ++M P VT +LI GFC +
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI--DGFCKNGDLDG 584
Query: 353 AKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLY 411
A LF + E+ KV T N ++ + A+ LFQ + PD TY+L+
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 412 KAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ K + G IP+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPS 671
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 152/390 (38%), Gaps = 42/390 (10%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
+ E+LG + K+ EV M++ GVY + G+KG+ + A+ +F M
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105
Query: 149 GCRPDTSVYNSLISAHLHS-------------RD------------------KTKALAKA 177
C P YN+++S + S RD KT A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L M + C+ N+V Y ++ F + + LF + S VS + T+N ++
Sbjct: 166 LRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 224
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
K+G ++E E +L ++ P+L T+NL I ++ + D ++ L+ KP
Sbjct: 225 VLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKP 284
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL- 356
+ T+N+++ K +AE +M G P T+ +LI Y V A+ +
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 357 ----FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
F+G V + T +++D C A +LF A + P+ Y L K
Sbjct: 345 GDAVFNGFVPDQF-----TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 413 AYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
+ G+IP + F
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 146/340 (42%), Gaps = 10/340 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMR-NTGCRPDTSVYNSLI 161
LE+F M+K+ + Y +I +G G+ + +MR N G VY
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY---- 79
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ + + + +A+ FE+M + C+P + +YN I+ +G +Q + ++ +
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ ++PD+Y++ M ++ K +L M S C+ +++ + ++ + ++
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ ++F +L S L TFN ++ K + E + ++ + G P+ T+ +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN--L 256
Query: 342 YMYGFCD--CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
++ G C + A + L+E + V T N ++ C N+ QEA+ + +
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 400 VLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ PD+ TY L Y K G +P++
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 5/295 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ I + ++G+ A+ + + G +PD YN+LI + K +A Y
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI----YGLCKNSKFQEAEVYL 309
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM E +P+ TYN ++ + + G V+ + D + PD +TY ++D
Sbjct: 310 GKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G A+ KP++I +N LI + + Q+ + P + T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
FN +V K A+ + K M GY P T LI+ Y + A E+ D ++
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
++ V V T N++L+ C + ++ ++ P+ T+ +L ++ +
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 19/321 (5%)
Query: 106 FRWMQKQRWYMADNG----VYSKLISV--MGKKGQTRLAMWLFSEMRNTGCRPDTSVYNS 159
F K M D G VYS I + K + A+ L + M + GC + Y +
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 160 LISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
++ K A+ F KM G+ C + T+N +LR + G V++ L
Sbjct: 187 VVGGFYEENFK----AEGYELFGKMLASGVSLC---LSTFNKLLRVLCKKGDVKECEKLL 239
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
+ + V P+++TYN + +RG + M+ + KPD+IT+N LI K
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 278 QQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTH 337
+F + E ++ +P T+N+++ Y K + AE + G+ P T+
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 338 ESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
SLI G C ++A LF+ + ++ V N ++ + EA L
Sbjct: 360 RSLI--DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 396 RSIKVLPDASTYKLLYKAYTK 416
++P+ T+ +L K
Sbjct: 418 SEKGLIPEVQTFNILVNGLCK 438
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M DNGV Y+ L++ + K + M + M GC P+ +N L L S
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL----LESLC 542
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI-VSPD 228
+ + L +ALG E+MK + P+ VT+ ++ F + G ++ +LF+ ++E+ VS
Sbjct: 543 RYRKLDEALGLLEEMKN-KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
TYN ++ A+ ++ + E + M PD T+ L++D + K + +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
++ + PSL T ++ +A + +M + G P V
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 135/269 (50%), Gaps = 25/269 (9%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI------SAHLHSRDKTKALA 175
Y +I+ + K G T A+ L S+M T + +YN++I H+H+++
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQN------ 97
Query: 176 KALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
F +M KG+ P+++TY+ ++ +F ++G+ L +D+ E ++PD+ T++
Sbjct: 98 ----LFTEMHDKGI---FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++A K G + E E + M P IT+N +ID + K+ + + +++ S+
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VS 351
P + TF++++ Y KA+ D +F +M G + VT+ +LI +GFC +
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI--HGFCQVGDLD 268
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYC 380
A++L + ++ S V T +ML C
Sbjct: 269 AAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ +I + K G A LF+EM + G PD Y+ +I + S T A
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
E+ + P++VT++ ++ A + GKV + ++ D+ + P TYN ++D +
Sbjct: 138 IER-----QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K+ + + + ML M S C PD++TF+ LI+ Y K ++ D ++F + R +
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
T+ +++ + + D A+++ M G AP+++T +S++
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 124/296 (41%), Gaps = 13/296 (4%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M TGCRPD + +L++ +ALA E E +P Y I+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVE-----EGHQP----YGTIINGL 51
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+ G E +L ++E+ + + YN ++D K G + + T M PD+
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
IT++ +IDS+ + ++ EQ+ + ++ + P + TF++++ K +AE ++
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 325 MTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
M G P+ +T+ S+I GFC D ++ AK + D + V T + +++ YC
Sbjct: 172 MLRRGIFPTTITYNSMI--DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+F ++ + TY L + + G+ PN
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 9/287 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L++ + +G+ A+ L M G +P ++ N L K AL
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLC--------KMGDTESALNLL 64
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM+ K ++V YN I+ + G +LF ++ + + PD+ TY+G++D++ +
Sbjct: 65 SKMEE-THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + E +L M Q PD++TF+ LI++ K+ + + E+++ +LR P+ T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+NSM+ + K + A+ + M +P VT +LI Y V E+F +
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
+ T ++ +C A L S V P+ T++
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
+ + + +W ++ R M +R D +S LI+ + K+G+ A ++ +M
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDM-IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G P T YNS+I K L A + M + C P++VT++ ++ + +A
Sbjct: 176 GIFPTTITYNSMIDGFC----KQDRLNDAKRMLDSMAS-KSCSPDVVTFSTLINGYCKAK 230
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+V+ +F ++ + + TY ++ + + G + + +L M S+ P+ ITF
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQ 290
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ S K++ K + + L +S+
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQKSE 316
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 147/299 (49%), Gaps = 5/299 (1%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R Y D Y+ LI K+G A+ + +EM G P Y SLI HS K
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI----HSMCKA 358
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ +A+ + ++M+ C PN TY ++ F+Q G + + + ++++++ SP + T
Sbjct: 359 GNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
YN +++ + G + + A+L MK PD+++++ ++ + + D+ +V + ++
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVS 351
KP T++S++ + + R +A +++++M +G P T+ +LI Y +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
KA +L + +VE V V T + +++ + +EA L + + +P TY L
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 44/354 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKALG 179
Y+ LI G +A+ LF +M GC P+ YN+LI + R D L +++
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+KG+E PN+++YN+++ + G++++V+ + +++ S D TYN ++ Y
Sbjct: 268 ----LKGLE---PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
K G + M M + P +IT+ LI S K ++ + + P+
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI------------------ 341
T+ ++V + + ++A V ++M + G++PS VT+ +LI
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 342 ---------------YMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
+ GFC V +A + +VE ++ T ++++ +C
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+EA L++ + + PD TY L AY G++P+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 139/298 (46%), Gaps = 5/298 (1%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
+F EM + P+ YN LI + + + AL F+KM+ + C PN+VTYN +
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGN----IDVALTLFDKME-TKGCLPNVVTYNTL 246
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ + + K++ L + + + P++ +YN V++ + G ++E+ +LT M
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
D +T+N LI Y K+ F + + +LR PS+ T+ S++ + KA ++A
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
QM G P+ T+ +L+ + +++A + + ++ V T NA+++ +C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ ++A ++ + + + PD +Y + + ++ GI P+
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 143/300 (47%), Gaps = 15/300 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I+ + ++G+ + ++ +EM G D YN+LI + + +AL +
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM---HA 334
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E ++ P+++TY ++ + +AG + + + + P+ TY ++D + +
Sbjct: 335 EMLR--HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK---PS 298
+G + E +L M N P ++T+N LI+ + KME L KEK P
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT---GKMEDAIAVLEDMKEKGLSPD 449
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKEL 356
+ ++++++ + ++ D+A V ++M E G P +T+ SLI GFC+ +A +L
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ--GFCEQRRTKEACDL 507
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
++ ++ + T A+++ YC+ ++A L VLPD TY +L K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 153/356 (42%), Gaps = 30/356 (8%)
Query: 104 EVFRWMQKQRWYMADNG------VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
E +R +++ M DNG Y+ LI+ G+ A+ + +M+ G PD Y
Sbjct: 398 EAYRVLRE----MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
++++S S D +AL EK G+ KP+ +TY+ +++ F + + ++ L+
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEK--GI---KPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
+++ + PD +TY +++AY G + + + M PD++T+++LI+ K+
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 278 QQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD---------------KAENVF 322
+ + +++ L + PS T+++++ N K +A+ VF
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
+ M + P + +I+ + + KA L+ +V+S + T+ A++
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
E +S+ L +A K+L + + + G +PN
Sbjct: 689 GKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 128 VMGKKGQTRLAMWLFSEMRNTG--CRPDTSVYNSLISAH--LHSRDKTKA---LAKALGY 180
V K A +F ++ T C +SV++ ++ ++ L DK + LA+A G+
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGK-VEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
P +++YN +L A ++ + + ++FK++ ES VSP+++TYN ++ +
Sbjct: 166 M----------PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G I + +M++ C P+++T+N LID Y K ++ D ++ +S+ +P+L
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD-------CVSK 352
++N ++ + + V +M GY+ VT+ +LI G+C V
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI--KGYCKEGNFHQALVMH 333
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A+ L GL S V T +++ C A + R + P+ TY L
Sbjct: 334 AEMLRHGLTPS-----VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 413 AYTK 416
+++
Sbjct: 389 GFSQ 392
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 24/263 (9%)
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
GK + + LE K++ D YS ++S + A+ + EM G +PD
Sbjct: 429 GKMEDAIAVLEDM----KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 154 TSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
T Y+SLI R +TK +A +E+M + P+ TY ++ A+ G +E+
Sbjct: 485 TITYSSLIQGFCEQR-RTK---EACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKA 539
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
L ++ E V PD+ TY+ +++ K+ RE + +L ++ + P +T++ LI++
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 274 ---------------YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+ K + +QVF+S+L KP +N M+ + +A KA
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 319 ENVFKQMTEMGYAPSFVTHESLI 341
++K+M + G+ VT +L+
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALV 682
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 5/299 (1%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ LI KKG+ A LF EM G + Y LI+ + K +
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE----M 255
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+EKM+ + PN+ TYN ++ + G+ + +F ++ E VS +I TYN ++
Sbjct: 256 YEKMQ-EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ + E ++ +MKS+ P+LIT+N LID + + K + + L PSL
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+N +V + + A + K+M E G PS VT+ LI + D + KA +L +
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
E + V T + ++ +CI EA LF+ P+ Y + Y K S
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 116 MADNGVYSKL------ISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M ++GV+ L ++ + K G+T+ A +F EMR G + YN+LI
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC---- 314
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
+ L +A ++MK + PN++TYN ++ F GK+ + SL +DL +SP +
Sbjct: 315 REMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
TYN ++ + ++G M+ M+ KP +T+ +LID++ + +K Q+ S
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ P + T++ ++ + ++A +FK M E P+ V + ++I G+C
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL--GYCKE 491
Query: 350 VS--KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
S +A +L + E ++ V++ M++V C +EA+ L ++ + P S
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 408 KLLYKA 413
L+ +A
Sbjct: 552 SLISRA 557
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 144/304 (47%), Gaps = 11/304 (3%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
+A+ Y+ LI+ + K G + ++ +M+ G P+ YN +++ L +TK
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN-QLCKDGRTK--- 285
Query: 176 KALGYFEKMKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
A F++M+ ER NIVTYN ++ + K+ + N + + ++P++ TYN
Sbjct: 286 DAFQVFDEMR--ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D + G + + ++ +KS P L+T+N+L+ + +K ++ K +
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSK 352
KPS T+ ++ + ++ +KA + M E+G P T+ LI +GFC +++
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI--HGFCIKGQMNE 461
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A LF +VE + N M+ YC A L + ++ P+ ++Y+ + +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 413 AYTK 416
K
Sbjct: 522 VLCK 525
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 96 HDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTS 155
H ++ + ++ + +Y +I+ + L++ F+EM + G P ++
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSN 130
Query: 156 VYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNS 215
+N L++ + S + + +F + K + ++ ++ I+++ +AG++E+
Sbjct: 131 CFNYLLTFVVGS----SSFNQWWSFFNENK--SKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
L +L E SP++ Y ++D K+G I + + + M + T+ +LI+
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQMTEMGYAPSF 334
K + ++++ + P+L T+N ++ K R KD A VF +M E G + +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNI 303
Query: 335 VTHESLIYMYGFCD--CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
VT+ +LI G C +++A ++ D + + + T N ++D +C +A SL
Sbjct: 304 VTYNTLI--GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 393 QRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ +S + P TY +L + + GI P+K
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 9/289 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ +I + +KGQ A+ + M+ G RPD YNSLI+ HS + A+ L
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS-ARILSD 244
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+M P+++T++ ++ + + G++ + + ++ + V+P+I TYN +++
Sbjct: 245 MMRMG----ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G++ E + +L + S P+ +T+N LI+ Y K ++ D ++ + R
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFD 358
T+N++ Y +A AE V +M G P T I + G CD + KA +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN--ILLDGLCDHGKIGKALVRLE 418
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
L +SK + + T N ++ C + ++A LF V PD TY
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 5/281 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
AM L ++ G P+ +YN++I + L + + L + +KM +P++VTY
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDS-LCEKGQVNTALDVLKHMKKMG----IRPDVVTY 222
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
N ++ +G + D+ +SPD+ T++ ++D YGK G + E + M
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
P+++T+N LI+ D+ ++V L+ P+ T+N+++ Y KA+ D
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
+ M+ G T+ +L Y S A+++ +V V + T N +LD
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
C + +A + + K + TY ++ K KA+
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+IV ++ +L A A+ K E V SLF+ L+ +S D+Y++ ++D + + + +
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 252 LTRMKSNQCKPDLITF-----------------------------------NLLIDSYGK 276
L +M +P ++TF N +IDS +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
K Q + V K + + +P + T+NS++ + + + M MG +P +T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+LI +YG + +AK+ ++ +++ V + T N++++ CI+ L EA +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 397 SIKVLPDASTYKLLYKAYTKA 417
S P+A TY L Y KA
Sbjct: 317 SKGFFPNAVTYNTLINGYCKA 337
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSR-DKTKALAKAL- 178
+S LI V GK+GQ A ++EM P+ YNSLI+ +H D+ K + L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 179 --GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
G+F PN VTYN ++ + +A +V+ + + V D +TYN +
Sbjct: 317 SKGFF----------PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
Y + G E +L RM S PD+ TFN+L+D + K + L +SK
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ T+N ++ KA + A +F + G +P +T+ +++
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
D Y+ L + G+ A + M + G PD +N L+ KAL +
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 177 ALGYFEKMKGMERCKP--NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
++ +++ K I+TYNII++ +A KVE LF L VSPD+ TY
Sbjct: 417 -------LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
Query: 235 VMDAYGKRGMIREMEAMLTRMK 256
+M ++ + RE + +M+
Sbjct: 470 MMIGLRRKRLWREAHELYRKMQ 491
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 11/345 (3%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
KW E+ W++ Q W+ + LI+ GK G A + S + G P+ Y
Sbjct: 125 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 184
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+L+ ++ A A F +M+ +P+ +TY IIL+ F + K ++ +F
Sbjct: 185 TALMESYGRGGKCNNAEA----IFRRMQS-SGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 218 KDL-DE--SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
+ L DE S + PD Y+ ++ Y K G + + + M +T+N L+
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF- 298
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
+ + ++ +++ + RS +P + ++ ++ YG+AR +++A +VF++M + G P+
Sbjct: 299 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ L+ + V +AK +F + ++ + + ML Y + + A+ F+R
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 395 ARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ P+ TY L K Y KAN GI N+
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 461
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
++ +M+ + +PD Y LI A+ +R + +AL+ FE+M +P YNI+
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS----VFEEMLDA-GVRPTHKAYNIL 362
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
L AFA +G VEQ ++FK + + PD+++Y ++ AY + E R+K +
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+P+++T+ LI Y K +KM +V++ + S K + +++ G+ + A
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 482
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
+K+M G P L+ + D + +AKEL
Sbjct: 483 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 144/306 (47%), Gaps = 10/306 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWM--QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
++ + + DK+ EVF + +K+ D +Y +I + K G A +FS M
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
G T YNSL+S ++ +K +++M+ + +P++V+Y ++++A+
Sbjct: 281 VGKGVPQSTVTYNSLMSFETSYKEVSKI-------YDQMQRSD-IQPDVVSYALLIKAYG 332
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+A + E+ S+F+++ ++ V P YN ++DA+ GM+ + + + M+ ++ PDL
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++ ++ +Y + E+ FK + +P++ T+ +++ Y KA +K V+++M
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
G + +++ G C A + + V N +L + +
Sbjct: 453 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 512
Query: 386 QEADSL 391
+EA L
Sbjct: 513 EEAKEL 518
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 159/386 (41%), Gaps = 37/386 (9%)
Query: 64 ISDKEPLERTLNKYVRLVRTEHCFLLFEELGK----HDKWLPCLEVFRWM------QKQR 113
I D + LN + E FLLFEE+ + D + + V + Q ++
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 114 WY--MADNG------VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
W+ M + G Y+ LI K + A LF M + GC P+ Y++LI H
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 166 HSRDKTKALAKALGYFEKMKGMERC---------------KPNIVTYNIILRAFAQAGKV 210
K + KA FE+M G + +PN+VTY +L F ++ +V
Sbjct: 600 ----KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
E+ L + P+ Y+ ++D K G + E + + T M + L T++ L
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
ID Y K ++ D +V +L + P++ + M+ K D+A + + M E G
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
P+ VT+ ++I +G + EL + + V T ++D C N A +
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 391 LFQRARSIKVLPDASTYKLLYKAYTK 416
L + + + Y+ + + + K
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNK 861
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 134/356 (37%), Gaps = 66/356 (18%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS L+ K Q + + M GC P ++NSL+ A+ S D + A +
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA-------Y 392
Query: 182 EKMKGMERCK--PNIVTYNIIL-------------------------------------- 201
+ +K M +C P V YNI++
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 202 ---RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
R AGK E+ S+ +++ PD TY+ V++ + + MK
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
D+ T+ +++DS+ K ++ + F + P++ T+ +++ Y KA+ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK-------------- 364
+F+ M G P+ VT+ +LI + V KA ++F+ + SK
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 365 --VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ V T A+LD +C ++ +EA L P+ Y L K
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 144/344 (41%), Gaps = 45/344 (13%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+ F W +Q Y VY+ L+ ++ + ++ ++R+ D V+ ++
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRD----DDKEVFGEFLN 204
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD- 221
+ + + + AL ++K R +P+ TYN +++AF +A +++ + + +++
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 222 --------------------------------ESIVSPDIYTYNGVMDAYGKRGMIREME 249
E+ V PD Y ++ + + E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV-PDTVFYTKLISGLCEASLFEEAM 322
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
L RM++ C P+++T++ L+ K+Q + ++V ++ PS FNS+V Y
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLI-YMYG-----FCDCVSKAKELFDGLVES 363
+ A + K+M + G+ P +V + LI + G CD + A++ + ++ +
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
V + +++ C ++A S+ + +PD STY
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 23/299 (7%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA---QAG 208
PDT Y LIS + +A+ + +M+ C PN+VTY+ +L Q G
Sbjct: 300 PDTVFYTKLISGLCEA----SLFEEAMDFLNRMRATS-CLPNVVTYSTLLCGCLNKKQLG 354
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ ++V ++ ++ SP I+ N ++ AY G +L +M P + +N
Sbjct: 355 RCKRVLNMMM-MEGCYPSPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 269 LLIDSY-GKKQQF-----DKMEQVFKSLLRSK---EKPSLPTFNSMVLNYGKARLKDKAE 319
+LI S G K D E+ + +L + K ++ +F + + GK +KA
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK---YEKAF 468
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
+V ++M G+ P T+ ++ + A LF+ + + V T M+D +
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
C L ++A F R + P+ TY L AY KA G +PN
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 54/277 (19%)
Query: 110 QKQRWYMADNG------VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
Q+ + M+++G YS LI K + LA + S+M C P+ +Y +I
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
L KT K + E+ KG C+PN+VTY ++ F GK+E L + +
Sbjct: 754 -LCKVGKTDEAYKLMQMMEE-KG---CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 224 IVSPDIYTYNGVMDAYGKRG-------MIREME--------------------------A 250
V+P+ TY ++D K G ++ EM+
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK----MEQV--FKSLLRSKEKPSLPTFNS 304
+L + + P L + LLID+ K Q+ + +E+V F + L T+NS
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS----TYNS 924
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
++ + A + A +F +MT+ G P + SLI
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 19/314 (6%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
++ D Y+KLIS + + AM + MR T C P+ Y++L+ L+
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK------- 350
Query: 175 AKALGYFEK---MKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
K LG ++ M ME C P+ +N ++ A+ +G L K + + P
Sbjct: 351 -KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 232 YNGVMDAY--GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK----KQQFDKMEQ 285
YN ++ + K + ++ + + S ++ + + S+ + +++K
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNY-GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
V + ++ P T+ S VLNY A + A +F++M G T+ ++ +
Sbjct: 470 VIREMIGQGFIPDTSTY-SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
+ +A++ F+ + E V T A++ Y A+ LF+ S LP+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 405 STYKLLYKAYTKAN 418
TY L + KA
Sbjct: 589 VTYSALIDGHCKAG 602
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 11/345 (3%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
KW E+ W++ Q W+ + LI+ GK G A + S + G P+ Y
Sbjct: 118 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 177
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+L+ ++ A A F +M+ +P+ +TY IIL+ F + K ++ +F
Sbjct: 178 TALMESYGRGGKCNNAEA----IFRRMQS-SGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 218 KDL-DE--SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
+ L DE S + PD Y+ ++ Y K G + + + M +T+N L+
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF- 291
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
+ + ++ +++ + RS +P + ++ ++ YG+AR +++A +VF++M + G P+
Sbjct: 292 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ L+ + V +AK +F + ++ + + ML Y + + A+ F+R
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 395 ARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ P+ TY L K Y KAN GI N+
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 454
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
++ +M+ + +PD Y LI A+ +R + +AL+ FE+M +P YNI+
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS----VFEEMLDA-GVRPTHKAYNIL 355
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
L AFA +G VEQ ++FK + + PD+++Y ++ AY + E R+K +
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+P+++T+ LI Y K +KM +V++ + S K + +++ G+ + A
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
+K+M G P L+ + D + +AKEL
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 144/306 (47%), Gaps = 10/306 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWM--QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
++ + + DK+ EVF + +K+ D +Y +I + K G A +FS M
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
G T YNSL+S ++ +K +++M+ + +P++V+Y ++++A+
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSYKEVSKI-------YDQMQRSD-IQPDVVSYALLIKAYG 325
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+A + E+ S+F+++ ++ V P YN ++DA+ GM+ + + + M+ ++ PDL
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++ ++ +Y + E+ FK + +P++ T+ +++ Y KA +K V+++M
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
G + +++ G C A + + V N +L + +
Sbjct: 446 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 505
Query: 386 QEADSL 391
+EA L
Sbjct: 506 EEAKEL 511
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 6/302 (1%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
LF EM G +PD + + ++IS + +A+ +FEKM C+P+ VT +
Sbjct: 197 LFDEMLERGIKPDNATFTTIISC----ARQNGVPKRAVEWFEKMSSF-GCEPDNVTMAAM 251
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ A+ +AG V+ SL+ D T++ ++ YG G + MK+
Sbjct: 252 IDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGV 311
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
KP+L+ +N LIDS G+ ++ + + ++K L+ + P+ T+ ++V YG+AR D A
Sbjct: 312 KPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALA 371
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS-TLNAMLDVY 379
++++M E G + + + + +L+ M V +A E+F + + S T ++++ VY
Sbjct: 372 IYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVY 431
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ EA++ + R P + + Y KA GI P+
Sbjct: 432 ACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Query: 440 RF 441
RF
Sbjct: 492 RF 493
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 170 KTKALAKALGYFEKMKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
K+K L K+ F++M +ER KP+ T+ I+ Q G ++ F+ + PD
Sbjct: 187 KSKDLEKSEKLFDEM--LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPD 244
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
T ++DAYG+ G + ++ R ++ + + D +TF+ LI YG +D +++
Sbjct: 245 NVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYE 304
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
+ KP+L +N ++ + G+A+ +A+ ++K + G+ P++ T+ +L+ YG
Sbjct: 305 EMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL-PDASTY 407
A ++ + E + + V N +L + N EA +FQ ++ + PD+ T+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 408 KLLYKAYT 415
L Y
Sbjct: 425 SSLITVYA 432
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 33/283 (11%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R DN ++ +IS + G + A+ F +M + GC PD ++I A+ + +
Sbjct: 203 ERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVD 262
Query: 172 KALA-------------------------------KALGYFEKMKGMERCKPNIVTYNII 200
AL+ L +E+MK + KPN+V YN +
Sbjct: 263 MALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL-GVKPNLVIYNRL 321
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ + +A + Q ++KDL + +P+ TY ++ AYG+ + A+ MK
Sbjct: 322 IDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAE 319
+I +N L+ + D+ ++F+ + + P TF+S++ Y + +AE
Sbjct: 382 SLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAE 441
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
QM E G+ P+ S+I YG V FD ++E
Sbjct: 442 AALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L ++ + ++W + D +S LI + G G + ++ EM+ G +P+ +YN LI
Sbjct: 265 LSLYDRARTEKWRI-DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLID 323
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ R K AK + G PN TY ++RA+ +A + ++++++ E
Sbjct: 324 SM--GRAKRPWQAKIIYKDLITNGF---TPNWSTYAALVRAYGRARYGDDALAIYREMKE 378
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ-CKPDLITFNLLIDSYGKKQQFD 281
+S + YN ++ + E + MK+ + C PD TF+ LI Y +
Sbjct: 379 KGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVS 438
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+ E + + +P+L S++ YGKA+ D F Q+ E+G P
Sbjct: 439 EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 37/233 (15%)
Query: 187 MERCKPN--IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
+E KP+ ++ YN+ ++ F ++ +E+ LF ++ E + PD T+ ++ + G+
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ +M S C+PD +T +ID+Y
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAY------------------------------ 255
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK 364
G+A D A +++ + + VT +LI +YG +++ +
Sbjct: 256 -----GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
V+ + N ++D P +A +++ + P+ STY L +AY +A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+L MK ++ ++I +N+ + + K + +K E++F +L KP TF +++
Sbjct: 165 LLETMKPSR---EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
+ + +A F++M+ G P VT ++I YG V A L+D K +I
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXX 430
T + ++ +Y ++ ++++ +++ V P+ Y L + +A
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 431 XXXGIIPN 438
G PN
Sbjct: 342 ITNGFTPN 349
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 119/228 (52%), Gaps = 9/228 (3%)
Query: 189 RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY---GKRGMI 245
+ +PN+ T+N+++ A + GK+ + + +D+ SP++ +YN ++D Y G G +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 246 REMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM 305
+ +A+L M N P+L TFN+LID + K +VFK +L KP++ ++NS+
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 306 VLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVES 363
+ +A ++ +M G P+ +T+ +LI GFC D + +A ++F G V+
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI--NGFCKNDMLKEALDMF-GSVKG 394
Query: 364 KVQIKVSTL-NAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + + + N ++D YC + +L + ++PD TY L
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
GY+ CKP ++ A + + V ++K++ + P+++T+N V++A
Sbjct: 180 GYYGYKLSALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY---GKKQQFDKMEQVFKSLLRSKE 295
K G + + ++ MK C P+++++N LID Y G + K + V K ++ +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKA 353
P+L TFN ++ + K + VFK+M + P+ +++ SLI G C+ +S+A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI--NGLCNGGKISEA 350
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+ D +V + VQ + T NA+++ +C N++ +EA +F + +P Y +L A
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 414 YTKANSXXXXXXXXXXXXXXGIIPN 438
Y K GI+P+
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPD 435
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 139/314 (44%), Gaps = 11/314 (3%)
Query: 129 MGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGME 188
+G G+ A + EM P+ + +N LI K L ++ F++M +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW----KDDNLPGSMKVFKEMLDQD 326
Query: 189 RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREM 248
KPN+++YN ++ GK+ + S+ + + V P++ TYN +++ + K M++E
Sbjct: 327 -VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
M +K P +N+LID+Y K + D + + + R P + T+N ++
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQ 366
+ + A+ +F Q+T G P VT I M G+C KA L + + ++
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFH--ILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 367 IKVSTLNAMLDVYCI-NNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXX 425
+ T N ++ YC NL + Q + ++ + ++Y +L + Y++
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 426 XXXXXXXXGIIPNK 439
G++PN+
Sbjct: 563 LLNEMLEKGLVPNR 576
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 28/252 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L K+D L++F ++ Q + +Y+ LI K G+ L EM
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQ 206
G PD YN LI+ R+ AK L F+++ KG+ P++VT++I++ + +
Sbjct: 431 GIVPDVGTYNCLIAG--LCRNGNIEAAKKL--FDQLTSKGL----PDLVTFHILMEGYCR 482
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPDLI 265
G+ + L K++ + + P TYN VM Y K G ++ M T+M K + + ++
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++N+L+ Y +K + + + +L P+ T+ E V ++M
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEM 586
Query: 326 TEMGYAPSFVTH 337
+ G+ P H
Sbjct: 587 VDQGFVPDIEGH 598
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
+KG++R A L EM G +P YN ++ + K L A +M+ R
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC----KEGNLKAATNMRTQMEKERRL 537
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
+ N+ +YN++L+ ++Q GK+E N L ++ E + P+ TY V + +G + ++E
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 251 ML 252
L
Sbjct: 598 HL 599
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 40/322 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + K A+ LF++M G RP+ YN+L++ A A
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA---AWLLR 247
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ MK R +PN++T+ ++ AF + GK+ + L+ + + V PD++TY +++
Sbjct: 248 DMMK--RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G++ E M M+ N C P+ + + LI + K ++ + ++F + + + T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL--------------------- 340
+ ++ Y D A+ VF QM+ P T+ L
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 341 ------------IYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
I + G C V A +LF L ++ V T M+ +C L
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 387 EADSLFQRARSIKVLPDASTYK 408
EADSLF++ + LP+ S YK
Sbjct: 486 EADSLFKKMKEDGFLPNESVYK 507
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 136/301 (45%), Gaps = 5/301 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ LF ++ G +P+ Y +LI K + L A+ F +M G +PN+VTY
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLC----KNRHLNHAVELFNQM-GTNGSRPNVVTY 226
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
N ++ + G+ L +D+ + + P++ T+ ++DA+ K G + E + + M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD+ T+ LI+ D+ Q+F + R+ P+ + +++ + K++ +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
+F +M++ G + +T+ LI Y A+E+F+ + + + T N +LD
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIP 437
C N ++A +F+ R ++ + TY ++ + K G+ P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 438 N 438
N
Sbjct: 467 N 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 10/247 (4%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L + K K + E++ M + Y D Y LI+ + G A +F M
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQ 206
GC P+ +Y +LI H K+K + + F +M KG+ N +TY ++++ +
Sbjct: 323 GCYPNEVIYTTLI----HGFCKSKRVEDGMKIFYEMSQKGV---VANTITYTVLIQGYCL 375
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
G+ + +F + PDI TYN ++D G + + + M+ + +++T
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ ++I K + + +F SL KP++ T+ +M+ + + L +A+++FK+M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 327 EMGYAPS 333
E G+ P+
Sbjct: 496 EDGFLPN 502
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 130/303 (42%), Gaps = 9/303 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLIS--AHLHSRDKTKALAKALGYFEKMKGMERCKPNIV 195
A+ LF+ M ++ P + L+S A ++ D +L FE+M+ + P +
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL------FEQMQILG-IPPLLC 119
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
T NI++ + + + + + + PD+ T+ +++ Y I + A+ ++
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
KP+++T+ LI K + + ++F + + +P++ T+N++V +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
A + + M + P+ +T +LI + + +AKEL++ +++ V V T ++
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGI 435
++ C+ L EA +F P+ Y L + K+ G+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 436 IPN 438
+ N
Sbjct: 360 VAN 362
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
Q AD + + ++ + K G A LF+EM G P+ YN +I + HS +
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
A EK + P+IVT++ ++ AF + KV + ++K++ + P T
Sbjct: 63 DADQLLRHMIEK-----QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
YN ++D + K+ + + + ML M S C PD++TF+ LI+ Y K ++ D ++F +
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
R + T+ +++ + + D A+++ +M G AP ++T + + G C
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM--LAGLC 231
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN++TYN ++ +F +G+ + L + + E ++PDI T++ +++A+ K + E E +
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
M P IT+N +ID + K+ + D +++ S+ P + TF++++ Y K
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKV 369
A+ D +F +M G + VT+ +LI +GFC + A++L + ++ V
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLI--HGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 370 STLNAMLDVYC 380
T + ML C
Sbjct: 221 ITFHCMLAGLC 231
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%)
Query: 186 GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMI 245
G K ++V I+ + G +LF ++ E + P++ TYN ++D++ G
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 246 REMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM 305
+ + +L M Q PD++TF+ LI+++ K+++ + E+++K +LR P+ T+NSM
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 306 VLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKV 365
+ + K D A+ + M G +P VT +LI Y V E+F + +
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 366 QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
T ++ +C A L S V PD T+ +
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 226
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ +S + D+ ++D K G + + T M P+++T+N +IDS+ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
+ +Q+ + ++ + P + TF++++ + K R +AE ++K+M P+ +T+ S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 340 LIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
+I GFC D V AK + D + V T + +++ YC +F
Sbjct: 121 MI--DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 398 IKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
++ + TY L + + G+ P+
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
+W ++ R M +++ D +S LI+ K+ + A ++ EM P T Y
Sbjct: 60 RWSDADQLLRHMIEKQ-INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
NS+I +D+ + L KG C P++VT++ ++ + +A +V+ +F
Sbjct: 119 NSMIDGFC-KQDRVDDAKRMLDSMAS-KG---CSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
++ + + TY ++ + + G + + +L M S PD ITF+ ++ K
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Query: 278 QQFDKMEQVFKSLLRSKE 295
++ K + + L +S++
Sbjct: 234 KELRKAFAILEDLQKSED 251
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 162/365 (44%), Gaps = 47/365 (12%)
Query: 54 RELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQR 113
RE++ L + + + + L L+ + R V C +G+ CL + WM Q
Sbjct: 174 REILEL-AKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWMSLQE 232
Query: 114 WYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA 173
+A S L +++G++ + L S + + D +YN+ IS S+ A
Sbjct: 233 PSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDA 292
Query: 174 LAKALGYFEKMKGMERCK--PNIVTYNIILRAFAQAGK-VEQVNSLFKDLDESIV--SPD 228
+E + M++ P+ VT I++ +AG+ ++V +F+ + E V S D
Sbjct: 293 -------WEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD 345
Query: 229 IY---------------------------------TYNGVMDAYGKRGMIREMEAMLTRM 255
++ YN +MDAY K I E+E + T M
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA-RL 314
+ KP T+N+L+D+Y ++ Q D +E + + + +P++ ++ ++ YG+ ++
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 315 KDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNA 374
D A + F +M ++G PS ++ +LI+ Y KA F+ + + ++ V T +
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 375 MLDVY 379
+LD +
Sbjct: 526 VLDAF 530
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 160/342 (46%), Gaps = 11/342 (3%)
Query: 104 EVFRWMQKQ--RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E+F M ++ +W V+ L+ +G A+ + +EM G R +T VYN+L+
Sbjct: 330 EIFEKMSEKGVKW---SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
A+ +K+ + + G F +M+ + KP+ TYNI++ A+A+ + + V +L ++++
Sbjct: 387 DAY----NKSNHIEEVEGLFTEMRD-KGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEA-MLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
+ + P++ +Y ++ AYG+ + +M A RMK KP ++ LI +Y
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+K F+ + + KPS+ T+ S++ + ++ K ++K M + +T+ +L
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
+ + +A+++ + +Q V T N +++ Y + L + ++ +
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
PD+ TY + A+ + G +P+ R +
Sbjct: 622 KPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 6/220 (2%)
Query: 122 YSKLISVMGK-KGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
Y+ LIS G+ K + +A F M+ G +P + Y +LI A+ S KA A
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS---- 507
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE+M E KP++ TY +L AF ++G ++ ++K + + TYN ++D +
Sbjct: 508 FEEM-CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K+G+ E +++ +P ++T+N+L+++Y + Q K+ Q+ K + KP
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
T+++M+ + + R +A K M + G P ++E L
Sbjct: 627 TYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 155/306 (50%), Gaps = 17/306 (5%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D +S +IS + +K + A F +++ PD VY +L+ + + +++A
Sbjct: 220 DKIAFSIVISNLSRKRRASEAQSFFDSLKDRF-EPDVIVYTNLVRGWCRAGE----ISEA 274
Query: 178 LGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
F++MK G+E PN+ TY+I++ A + G++ + + +F D+ +S +P+ T+N +
Sbjct: 275 EKVFKEMKLAGIE---PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
M + K G ++ + +MK C+PD IT+N LI+++ + + + +V ++++ K
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY---GFCDCVSK 352
+ + TFN++ K R + A ++ +M E P+ VT+ L+ M+ D V K
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLK 451
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL-PDASTYKLLY 411
K+ D + +V+ V+T ++ ++C A LF+ K L P S Y+++
Sbjct: 452 MKKEMD---DKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 412 KAYTKA 417
+A
Sbjct: 509 AQLRRA 514
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDE----------SIV----------------- 225
+I T+ I++R + +AG + F +++ SIV
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 226 -------SPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
PD+ Y ++ + + G I E E + MK +P++ T++++ID+ +
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
Q + VF +L S P+ TFN+++ + KA +K V+ QM ++G P +T+
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
LI + + + A ++ + +++ K ++ ST N + A ++ +
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 399 KVLPDASTYKLLYKAYTKANS 419
K P+ TY +L + + + S
Sbjct: 425 KCEPNTVTYNILMRMFVGSKS 445
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 207 AGKVEQVNSLFKDLD---ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+GKV Q + + +D V I T+ ++ Y + G+ E RM+ C PD
Sbjct: 161 SGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPD 220
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
I F+++I + +K++ + + F S L+ + +P + + ++V + +A +AE VFK
Sbjct: 221 KIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 324 QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M G P+ T+ +I C +S+A ++F +++S T N ++ V+
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
++ ++ + + + PD TY L +A+ +
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 1/176 (0%)
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+N +ID GK +QFD + + + S+ TF ++ Y +A L +A + F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
+ G P + +I S+A+ FD L + + + V ++ +C
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
EA+ +F+ + + P+ TY ++ A + G PN F
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 6/321 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI ++ A +F+EM GCR + Y LI H + + +A+ F
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI----HGLCVARRIDEAMDLF 311
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KMK + C P + TY +++++ + + + +L K+++E+ + P+I+TY ++D+
Sbjct: 312 VKMKD-DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + +L +M P++IT+N LI+ Y K+ + V + + K P+ T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+N ++ Y K+ + KA V +M E P VT+ SLI A L +
Sbjct: 431 YNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXX 421
+ + T +M+D C + +EA LF V P+ Y L Y KA
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 422 XXXXXXXXXXXXGIIPNKRFF 442
+PN F
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTF 570
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 6/289 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + + A+ L EM TG +P+ Y LI + L S+ K + + LG
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS-LCSQCKFEKARELLGQM 384
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ KG+ PN++TYN ++ + + G +E + + ++ +SP+ TYN ++ Y K
Sbjct: 385 LE-KGL---MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + M +L +M + PD++T+N LID + FD ++ + P T
Sbjct: 441 SNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ SM+ + K++ ++A ++F + + G P+ V + +LI Y V +A + + ++
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
T NA++ C + +EA L ++ I + P ST +L
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PNI TYN ++ + + G VE+ N + E+ + PD +TY ++ Y +R + +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
M C+ + + + LI ++ D+ +F + + P++ T+ ++ +
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLI-YMYGFCDCVSKAKELFDGLVESKVQIKVS 370
+ K +A N+ K+M E G P+ T+ LI + C KA+EL ++E + V
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKARELLGQMLEKGLMPNVI 394
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
T NA+++ YC + ++A + + S K+ P+ TY L K Y K+N
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 136/305 (44%), Gaps = 10/305 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
++ M + Y+ LI+ K+G A+ + M + P+T YN LI + S
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN--- 442
Query: 172 KALAKALGYFEKMKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
+ KA+G KM +ER P++VTYN ++ ++G + L +++ + PD +
Sbjct: 443 --VHKAMGVLNKM--LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
TY ++D+ K + E + ++ P+++ + LID Y K + D+ + + +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 291 LRSKEKPSLPTFNSMVLNY-GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
L P+ TFN+++ +LK+ A + ++M ++G P+ T LI+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKE-ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
A F ++ S + T + YC +A+ + + R V PD TY
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 410 LYKAY 414
L K Y
Sbjct: 678 LIKGY 682
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 7/235 (2%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R + D Y+ LI + G A L S M + G PD Y S+I S K+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID----SLCKS 510
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
K + +A F+ ++ + PN+V Y ++ + +AGKV++ + + + + P+ T
Sbjct: 511 KRVEEACDLFDSLE-QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
+N ++ G ++E + +M +P + T +LI K FD F+ +L
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 292 RSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
S KP T+ + + Y + RL D AE++ +M E G +P T+ SLI YG
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLD-AEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 28/311 (9%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ LI K G+ A + +M + C P++ +N+LI H L +A
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI----HGLCADGKLKEATLL 589
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
EKM + +P + T I++ + G + S F+ + S PD +TY + Y
Sbjct: 590 EEKMVKIGL-QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ G + + E M+ +M+ N PDL T++ LI YG Q + V K + + +PS
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 301 TFNSMV-----LNYGKARLK-------------DKAENVFKQMTEMGYAPSFVTHESLIY 342
TF S++ + YGK + D + ++M E P+ ++E LI
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI- 767
Query: 343 MYGFCDC--VSKAKELFDGLVESK-VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
G C+ + A+++FD + ++ + NA+L C EA + +
Sbjct: 768 -LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 400 VLPDASTYKLL 410
LP + K+L
Sbjct: 827 HLPQLESCKVL 837
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 29/269 (10%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M +NGV YS LI G GQT A + MR+TGC P + SLI L +
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK- 721
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
+ K KG E P + A + + + V L + + E V+P+
Sbjct: 722 -----------YGKQKGSE---PELC-------AMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQ-CKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+Y ++ + G +R E + M+ N+ P + FN L+ K ++ ++ +V
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
++ P L + ++ K K++ +VF+ + + GY + + +I G
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLD 377
V ELF+ + ++ + T + +++
Sbjct: 881 LVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
I YN ++++ + G++ EM+ + M ++ P++ T+N +++ Y K ++ Q
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
++ + P T+ S+++ Y + + D A VF +M G + V + LI +G C
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI--HGLCV 300
Query: 349 C--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
+ +A +LF + + + V T ++ C + EA +L + + P+ T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 407 YKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
Y +L + G++PN
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K R ++ D YS LI + K G LF M+ GC DT YN +I K
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC----K 599
Query: 171 TKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+ KA E+MK G E P +VTY ++ A+ ++++ LF++ + +
Sbjct: 600 CGKVNKAYQLLEEMKTKGFE---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+ Y+ ++D +GK G I E +L + P+L T+N L+D+ K ++ ++ F+
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
S+ K P+ T+ ++ K R +KA +++M + G PS +++ ++I
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+++A LFD + + NAM++ N +A SLF+ R
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 11/303 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA---HLHSRDKTKAL 174
D + LI +GK G+ A ++ +M ++ CR ++ VY SLI H D K
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ + C P++ N + +AG+ E+ ++F+++ PD +Y+
Sbjct: 506 KDMIN--------QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ K G E + MK C D +N++ID + K + +K Q+ + +
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
+P++ T+ S++ K D+A +F++ + V + SLI +G + +A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ + L++ + + T N++LD EA FQ + +K P+ TY +L
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 415 TKA 417
K
Sbjct: 738 CKV 740
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 132/269 (49%), Gaps = 17/269 (6%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
MR RP S Y +LI A + + + + L F++M+ + +P + + ++R F
Sbjct: 159 MRKFKFRPAFSAYTTLIGA-FSAVNHSDMM---LTLFQQMQELGY-EPTVHLFTTLIRGF 213
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
A+ G+V+ SL ++ S + DI YN +D++GK G + +++N KPD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+ +I K + D+ ++F+ L +++ P +N+M++ YG A D+A ++ ++
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC---- 380
G PS + + ++ V +A ++F+ + + +ST N ++D+ C
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGK 392
Query: 381 ------INNLPQEADSLFQRARSIKVLPD 403
+ + Q+A LF R++ ++ D
Sbjct: 393 LDTAFELRDSMQKA-GLFPNVRTVNIMVD 420
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 158/383 (41%), Gaps = 51/383 (13%)
Query: 71 ERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMG 130
E T++ + L+R F + G+ D L L+ K AD +Y+ I G
Sbjct: 200 EPTVHLFTTLIRG------FAKEGRVDSALSLLDEM----KSSSLDADIVLYNVCIDSFG 249
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
K G+ +A F E+ G +PD Y S+I K L +A+ FE ++ R
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC----KANRLDEAVEMFEHLEKNRRV 305
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
P YN ++ + AGK ++ SL + P + YN ++ K G + E
Sbjct: 306 -PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ MK + P+L T+N+LID + + D ++ S+ ++ P++ T N MV
Sbjct: 365 VFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK-- 368
K++ D+A +F++M P +T SLI G V A ++++ +++S +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 369 ---------------------------------VSTLNAMLDVYCINNLPQEADSLFQRA 395
+ LN +D P++ ++F+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 396 RSIKVLPDASTYKLLYKAYTKAN 418
++ + +PDA +Y +L KA
Sbjct: 544 KARRFVPDARSYSILIHGLIKAG 566
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 142/324 (43%), Gaps = 17/324 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ LI G+ ++ +M N C PD + N+ + + + K A
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA----M 539
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
FE++K R P+ +Y+I++ +AG + LF + E D YN V+D +
Sbjct: 540 FEEIKA-RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G + + +L MK+ +P ++T+ +ID K + D+ +F+ + + ++
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
++S++ +GK D+A + +++ + G P+ T SL+ D + KA+E+ + L
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL------DALVKAEEINEAL 712
Query: 361 V--ESKVQIKVS----TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
V +S ++K + T +++ C +A +Q + + P +Y +
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
KA + G +P+
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPD 796
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 12/308 (3%)
Query: 104 EVFRWMQKQRWYMADNGV--YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E + +++QR + V Y+ +++ + K G+ A+ +F EM+ P+ S YN LI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILI 384
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCK--PNIVTYNIILRAFAQAGKVEQVNSLFKD 219
D K FE M++ PN+ T NI++ ++ K+++ ++F++
Sbjct: 385 -------DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+D + +PD T+ ++D GK G + + + +M + C+ + I + LI ++ +
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
+ +++K ++ P L N+ + KA +K +F+++ + P ++
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 340 LIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
LI+ ++ ELF + E + N ++D +C +A L + ++
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 400 VLPDASTY 407
P TY
Sbjct: 618 FEPTVVTY 625
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 150/358 (41%), Gaps = 17/358 (4%)
Query: 85 HCFL-LFEELGKHDKWLPCLEVFRWMQKQRWYMADN-GVYSKLISVMGKKGQTRLAMWLF 142
+C L ++GK D+ L+VF M+K A N Y+ LI ++ + G+ A L
Sbjct: 347 NCILTCLRKMGKVDE---ALKVFEEMKKD---AAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 143 SEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILR 202
M+ G P+ N ++ K++ L +A FE+M + C P+ +T+ ++
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLC----KSQKLDEACAMFEEMD-YKVCTPDEITFCSLID 455
Query: 203 AFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP 262
+ G+V+ +++ + +S + Y ++ + G + + M + C P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
DL N +D K + +K +F+ + + P +++ ++ KA ++ +F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
M E G T I + GFC C V+KA +L + + + V T +++D
Sbjct: 576 YSMKEQGCVLD--TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ EA LF+ A+S ++ + Y L + K G+ PN
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 122/308 (39%), Gaps = 40/308 (12%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E FRW +++ Y+ L+ VM + + EM G P + ++
Sbjct: 82 IEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL 141
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ K L + + M+ + +P Y ++ AF+ + + +LF+ + E
Sbjct: 142 GCV----KANKLREGYDVVQMMRKF-KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
P ++ + ++ + K G + ++L MKS+ D++ +N+ IDS+GK + D
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+ F + + KP T+ SM+ KA D+A +F+ + + P + ++I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
YG S K FD EA SL +R R+ +P
Sbjct: 317 GYG-----SAGK--FD----------------------------EAYSLLERQRAKGSIP 341
Query: 403 DASTYKLL 410
Y +
Sbjct: 342 SVIAYNCI 349
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 50/376 (13%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L+VF M K+ ++ YS LI + + G+ A L +M GC+P T Y LI
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 163 AHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
A L R + KA F++M +G CKPN+ TY +++ + GK+E+ N + + +
Sbjct: 310 A-LCDRG---LIDKAFNLFDEMIPRG---CKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK------------------- 261
+ + P + TYN +++ Y K G + +LT M+ CK
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 262 ----------------PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM 305
PD++++N+LID ++ + ++ S+ +P TF ++
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 306 VLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE---LFDGLVE 362
+ + K D A M G + VT +LI G C V K ++ + + LV+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI--DGVCK-VGKTRDALFILETLVK 539
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXX 422
++ +LN +LD+ +E ++ + + ++P TY L ++
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 423 XXXXXXXXXXXGIIPN 438
G +PN
Sbjct: 600 SFRILELMKLSGCLPN 615
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 13/332 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMR 146
L L K D +R M+ + M D Y +++ + K G T A S++
Sbjct: 166 LLMSLAKLDLGFLAYVTYRRMEADGFVVGMID---YRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 147 NTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
G D+ + SL+ + L AL F+ M C PN V+Y+I++ +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLN----LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
G++E+ L + E P TY ++ A RG+I + + M CKP++ T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ +LID + + ++ V + +++ + PS+ T+N+++ Y K A + M
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVS--KAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
+ P+ T L M G C KA L ++++ + + + N ++D C
Sbjct: 399 KRACKPNVRTFNEL--MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
A L + PD T+ + A+ K
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 140/361 (38%), Gaps = 69/361 (19%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL--- 178
Y+ LI + +G A LF EM GC+P+ Y LI RD A +
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL--CRDGKIEEANGVCRK 361
Query: 179 ------------------GY---------FEKMKGMER--CKPNIVTYNIILRAFAQAGK 209
GY FE + ME+ CKPN+ T+N ++ + GK
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
+ L K + ++ +SPDI +YN ++D + G + +L+ M +PD +TF
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 270 LIDSYGKKQQFDKMEQVFKSLLR---SKEKPSLPTFNSMVLNYGKAR------------- 313
+I+++ K+ + D +LR S ++ + T V GK R
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 314 ------------------LKDKAE-NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
K K E + ++ ++G PS VT+ +L+ ++ +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ + + S V +++ C +EA+ L + V P+ TY ++ K Y
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 415 T 415
Sbjct: 662 V 662
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D ++ +I+ K+G+ +A M G D +LI + KT+
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG-VCKVGKTRDALFI 533
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L KM+ + P+ + N+IL ++ KV++ ++ +++ + P + TY ++D
Sbjct: 534 LETLVKMRILT--TPH--SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ G I +L MK + C P++ + ++I+ + + ++ E++ ++ S P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ T+ MV Y D+A + M E GY + + SL+
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 11/235 (4%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M DNG+ Y+ LI + ++G A L S M PD + ++I+A +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC-KQG 490
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K + LG + KG+ + VT ++ + GK + + L + +
Sbjct: 491 KADVASAFLGLMLR-KGISL---DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
++ N ++D K ++E AML ++ P ++T+ L+D + ++ +
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
+ S P++ + ++ + ++AE + M + G +P+ VT+ ++ Y
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 166/370 (44%), Gaps = 23/370 (6%)
Query: 53 TRELVRLLTR-KISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQK 111
RE ++ L+R + S P T NK++ + +C +L K+L L
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL------SLKFLAYL-------V 48
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
R Y ++ ++S + K GQ + A + M GC PD YNSLI H + D
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD-I 107
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
++ + L G CKP+IV++N + F++ +++V ++ + SP++ T
Sbjct: 108 RSASLVLESLRASHGF-ICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVT 165
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
Y+ +D + K G ++ MK + P+++TF LID Y K + ++K +
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI---YMYGFCD 348
R + ++ T+ +++ + K +AE ++ +M E P+ + + ++I + G D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
A + ++ +++ ++ ++ C N +EA + + ++PD +
Sbjct: 286 ---NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 409 LLYKAYTKAN 418
+ AY K+
Sbjct: 343 TMMNAYFKSG 352
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 136/306 (44%), Gaps = 13/306 (4%)
Query: 104 EVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
EVF +M + N V YS I K G+ +LA+ F M+ P+ + LI
Sbjct: 147 EVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ + D L A+ +++M+ + R N+VTY ++ F + G++++ ++ + E
Sbjct: 207 GYCKAGD----LEVAVSLYKEMRRV-RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
V P+ Y ++D + +RG L +M + + D+ + ++I + +
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++ + + +S P + F +M+ Y K+ A N++ ++ E G+ P V ++I
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI- 380
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTL-NAMLDVYCINNLPQEADSLFQRARSIKVL 401
D ++K +L + +V ++ + ++D C E + LF + ++
Sbjct: 381 -----DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 402 PDASTY 407
PD Y
Sbjct: 436 PDKFMY 441
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 29/319 (9%)
Query: 108 WMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLH 166
+ + +R M+ N V Y+ LI KKG+ + A ++S M P++ VY ++I
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 167 SRDKTKA---LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
D A LAK L +GM + +I Y +I+ GK+++ + +D+++S
Sbjct: 281 RGDSDNAMKFLAKMLN-----QGM---RLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ PD+ + +M+AY K G ++ M ++ +PD++ + +ID K Q +
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
F EK + + ++ K + E +F +++E G P + S ++
Sbjct: 393 IVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS--WI 445
Query: 344 YGFCDCVSKAKELFDG------LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
G C K L D +V+ + + + ++ L EA +F +
Sbjct: 446 AGLC----KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 398 IKVLPDASTYKLLYKAYTK 416
+ PD++ + LL +AY K
Sbjct: 502 SGISPDSAVFDLLIRAYEK 520
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 16/266 (6%)
Query: 70 LERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVM 129
L + LN+ +RL T + ++ L + K E+ M+K + D +++ +++
Sbjct: 291 LAKMLNQGMRLDITAY-GVIISGLCGNGKLKEATEIVEDMEKSDL-VPDMVIFTTMMNAY 348
Query: 130 GKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER 189
K G+ + A+ ++ ++ G PD +++I K L +A+ YF
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG----IAKNGQLHEAIVYF-------- 396
Query: 190 C--KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIRE 247
C K N V Y +++ A + G +V LF + E+ + PD + Y + K+G + +
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
+ TRM DL+ + LI K + QVF +L S P F+ ++
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPS 333
Y K A ++ M G +
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLVTA 542
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 140/297 (47%), Gaps = 8/297 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ LI G G + ++ LF M+ G P +NSL+S L R +T A F
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILL-KRGRT---GMAHDLF 196
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M+ P+ T+N ++ F + V++ +FKD++ +PD+ TYN ++D +
Sbjct: 197 DEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCR 256
Query: 242 RGMIREMEAMLTRM--KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G ++ +L+ M K+ P+++++ L+ Y KQ+ D+ VF +L KP+
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTE--MGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
T+N+++ +A D+ +++ + +AP T LI + + A ++F
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++ K+ ++ + ++ C+ N A++LF +VL K L AY
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 151/324 (46%), Gaps = 14/324 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAM-WLFS-EMRNTGC-RPDTSVYNS 159
L F W+ + + + + ++ +G+ +A +LFS E R+ GC + +NS
Sbjct: 85 LRFFDWVSNKGFSHKEQSFF-LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143
Query: 160 LISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
LI ++ +++ F+ MK M P+++T+N +L + G+ + LF +
Sbjct: 144 LIRSY----GNAGLFQESVKLFQTMKQMG-ISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 220 LDESI-VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+ + V+PD YT+N +++ + K M+ E + M+ C PD++T+N +ID +
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 279 QFDKMEQVFKSLLR--SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
+ V +L+ + P++ ++ ++V Y + D+A VF M G P+ VT
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQIK--VSTLNAMLDVYCINNLPQEADSLFQR 394
+ +LI + K++ G ++ T N ++ +C A +FQ
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 395 ARSIKVLPDASTYKLLYKAYTKAN 418
++K+ PD+++Y +L + N
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRN 402
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 127/315 (40%), Gaps = 34/315 (10%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
++F M++ D+ ++ LI+ K A +F +M C PD YN++I
Sbjct: 194 DLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDG 253
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
L K K L +K PN+V+Y ++R + ++++ +F D+
Sbjct: 254 -LCRAGKVKIAHNVLSGM--LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 310
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS--NQCKPDLITFNLLIDSYGKKQQFD 281
+ P+ TYN ++ + E++ +L PD TFN+LI ++ D
Sbjct: 311 GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD 370
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+VF+ +L K P +++ ++ D+AE +F ++ E
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE-------------- 416
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
KE+ G E K + N M + C N ++A+ +F++ + +
Sbjct: 417 ------------KEVLLGKDECKPL--AAAYNPMFEYLCANGKTKQAEKVFRQLMK-RGV 461
Query: 402 PDASTYKLLYKAYTK 416
D +YK L + +
Sbjct: 462 QDPPSYKTLITGHCR 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL--HSRDKTK 172
+ D ++ LI G AM +F EM N PD++ Y+ LI + D+ +
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
L L E + G + CKP YN + GK +Q +F+ L + V D +Y
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSY 467
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
++ + + G + +L M + PDL T+ LLID K + + +LR
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR 527
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
S P TF+S++ K + +++ + M E
Sbjct: 528 SSYLPVATTFHSVLAELAKRKFANESFCLVTLMLE 562
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 18/337 (5%)
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV----YSKLISVMG--KKGQTRLAM 139
C + K + CLE+FR M D+GV YS I V G ++G+ +
Sbjct: 192 CIVFLVAAKKRRRIDLCLEIFRRM-------VDSGVKITVYSLTIVVEGLCRRGEVEKSK 244
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNI 199
L E G +P+ YN++I+A++ RD + G + MK + N VTY +
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRD----FSGVEGVLKVMKK-DGVVYNKVTYTL 299
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
++ + GK+ LF ++ E + D++ Y ++ ++G ++ + +
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAE 319
P T+ LID K + E + + + FN+++ Y + + D+A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
++ M + G+ T ++ + +AK+ ++E V++ + ++DVY
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
C +EA LF S V P+A TY ++ AY K
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 139/298 (46%), Gaps = 9/298 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ + K G+ A LF EMR G D VY SLIS + + + +A F
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN----MKRAFLLF 352
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+++ KG+ P+ TY ++ + G++ L ++ V+ +N ++D Y
Sbjct: 353 DELTEKGL---SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
++GM+ E + M+ + D+ T N + + + +++D+ +Q ++ K S
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
++ +++ Y K ++A+ +F +M+ G P+ +T+ +IY Y + +A++L
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ + + T +++ CI + EA LF + ++ TY ++ +KA
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA--HLHSRDKTKALAKAL 178
V++ LI +KG A ++ M G + D N++ S L D+ K
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW---- 456
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
F M+G K + V+Y ++ + + G VE+ LF ++ V P+ TYN ++ A
Sbjct: 457 -LFRMMEG--GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL-LRSKEKP 297
Y K+G I+E + M++N PD T+ LI D+ ++F + L+ ++
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
S+ T+ M+ KA D+A ++ +M GY + +LI
Sbjct: 574 SV-TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 10/311 (3%)
Query: 114 WYMA-----DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
W +A D Y+ LI+ + K+G+ +A+ E G P+ Y LI A+ S+
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+ A L E+ CKP+IVTY I++ +G ++ ++ L + VSPD
Sbjct: 395 EYDIASKLLLQMAER-----GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
YN +M K G + + + M PD + LID + + FD+ +VF
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
+ K + N+M+ + ++ + D+A +M E P T+ ++I Y
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
++ A ++F + ++K + V T ++++ +C + A+ F+ + ++P+ TY
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 409 LLYKAYTKANS 419
L ++ K +S
Sbjct: 630 TLIRSLAKESS 640
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 144/343 (41%), Gaps = 22/343 (6%)
Query: 74 LNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKG 133
+ Y +L E+ +L+F+EL K ++P LE F M I+ K+G
Sbjct: 247 IGGYCKLGDIENAYLVFKEL-KLKGFMPTLETFGTM----------------INGFCKEG 289
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPN 193
+ L SE++ G R N++I A K A+++G+ CKP+
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP-AESIGWIIA----NDCKPD 344
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+ TYNI++ + GK E + + + P+ +Y ++ AY K +L
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
+M CKPD++T+ +LI D + L+ P +N ++ K
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
A+ +F +M + P + +LI + +A+++F VE V++ V N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
AM+ +C + + EA + R ++PD TY + Y K
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 11/305 (3%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
DN L+ M +G+ + L GC P+ YN++I + D +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGD----IEN 258
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A F+++K ++ P + T+ ++ F + G + L ++ E + ++ N ++
Sbjct: 259 AYLVFKELK-LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
DA + G + + + +N CKPD+ T+N+LI+ K+ K E L + +K
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE---GKKEVAVGFLDEASKK 374
Query: 297 PSLP---TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
+P ++ ++ Y K++ D A + QM E G P VT+ LI+ + A
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+ L++ V + N ++ C A LF +LPDA Y L
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 414 YTKAN 418
+ ++
Sbjct: 495 FIRSG 499
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 22/241 (9%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ +I + G A+ + M PD Y+++I ++ +D A+ K Y
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI-KIFRYM 581
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
EK K CKPN+VTY ++ F G + FK++ + P++ TY ++ + K
Sbjct: 582 EKNK----CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 242 RGMIREMEAMLTR-MKSNQCKPDLITFNLLIDSYGKKQ--------------QFDKMEQV 286
E M +N+C P+ +TFN L+ + KK Q +
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEF 697
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
F + +NS ++ + A +M + G++P V+ ++ ++GF
Sbjct: 698 FHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI--LHGF 755
Query: 347 C 347
C
Sbjct: 756 C 756
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/260 (18%), Positives = 112/260 (43%), Gaps = 6/260 (2%)
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+S LH+ ++ +L+KA+ ++ + + P+++ N +L ++ ++ ++ ++
Sbjct: 137 LSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEM 196
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
+ S D Y+ ++ G + ++ C P+++ +N +I Y K
Sbjct: 197 CDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDI 256
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+ VFK L P+L TF +M+ + K ++ + ++ E G S ++
Sbjct: 257 ENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNI 316
Query: 341 I---YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
I Y +G+ E ++ + + V+T N +++ C + A A
Sbjct: 317 IDAKYRHGY---KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 398 IKVLPDASTYKLLYKAYTKA 417
++P+ +Y L +AY K+
Sbjct: 374 KGLIPNNLSYAPLIQAYCKS 393
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 32/345 (9%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI- 161
L + R M K + ++ +Y LI + K + A+ L EM GC PD +N +I
Sbjct: 237 LSLLRDMTKHGC-VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 162 ----------SAHLHSRDKTKALA-KALGYFEKMKGMERC--------------KPNIVT 196
+A + +R + A + Y M G+ + KP IV
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESI-VSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
+N ++ F G+++ ++ D+ S + PD+ TYN ++ Y K G++ +L M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ CKP++ ++ +L+D + K + D+ V + KP+ FN ++ + K
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLN 373
+A +F++M G P T SLI G C D + A L ++ V T N
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLI--SGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+++ + +EA L D TY L K +A
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 121 VYSKLISVMG--KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
VYS I V G K G+ A + +EM G +P+T +N LISA K + +A+
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC----KEHRIPEAV 479
Query: 179 GYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
F +M KG CKP++ T+N ++ + +++ L +D+ V + TYN ++
Sbjct: 480 EIFREMPRKG---CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+A+ +RG I+E ++ M D IT+N LI + + DK +F+ +LR
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAK 354
PS + N ++ ++ + ++A K+M G P VT SLI G C +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI--NGLCRAGRIEDGL 654
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+F L + T N ++ C +A L +P+ T+ +L ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 13/317 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+F W Q Y VY LI +G G+ + L +M++ G S++ S++
Sbjct: 95 MELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMR 154
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ DK + +M+ + C+P +YN++L + ++F D+
Sbjct: 155 DY----DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ P ++T+ VM A+ I ++L M + C P+ + + LI S K + ++
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
Q+ + + P TFN ++L K ++A + +M G+AP +T+ L
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL-- 328
Query: 343 MYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ-RARSIK 399
M G C V AK+LF + + ++ I N ++ + + +A ++ S
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 400 VLPDASTYKLLYKAYTK 416
++PD TY L Y K
Sbjct: 385 IVPDVCTYNSLIYGYWK 401
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 148/358 (41%), Gaps = 45/358 (12%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
+++ LI G+ A + S+M + G PD YNSLI + K + AL
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW----KEGLVGLALE 410
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
M+ + CKPN+ +Y I++ F + GK+++ ++ ++ + P+ +N ++ A+
Sbjct: 411 VLHDMRN-KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITF-------------------------------- 267
K I E + M CKPD+ TF
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 268 ---NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
N LI+++ ++ + + ++ ++ T+NS++ +A DKA ++F++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 325 MTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
M G+APS ++ LI G C V +A E +V + T N++++ C
Sbjct: 590 MLRDGHAPSNISCNILI--NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKR 440
++ ++F++ ++ + PD T+ L K G +PN R
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 95 KHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDT 154
KH WL R M + +A+ Y+ LI+ ++G+ + A L +EM G D
Sbjct: 511 KHALWL-----LRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
YNSLI + + + KA FEKM + P+ ++ NI++ ++G VE+
Sbjct: 565 ITYNSLIKGLCRAGE----VDKARSLFEKML-RDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
K++ +PDI T+N +++ + G I + M ++++ PD +TFN L+
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LI + + G+ A LF +M G P N LI+ S +A+
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE-- 620
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
F+K + P+IVT+N ++ +AG++E ++F+ L + PD T+N +M
Sbjct: 621 ---FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
K G + + +L + P+ T+++L+ S ++ D+
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 13/302 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ LI + + AM + EM+ G PD YNSLI K K + +A +
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG----LSKAKRMDEARSF 509
Query: 181 FEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+M G+ KPN TY + + +A + + K++ E V P+ G+++
Sbjct: 510 LVEMVENGL---KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y K+G + E + M D T+ +L++ K + D E++F+ + P
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKEL 356
+ ++ ++ + K KA ++F +M E G P+ + + L + GFC + KAKEL
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML--LGGFCRSGEIEKAKEL 684
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
D + + T ++D YC + EA LF + ++PD+ Y L +
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 417 AN 418
N
Sbjct: 745 LN 746
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 11/335 (3%)
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
C L E K K + +R M Q + D Y+ L++ + K + A +F EM
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
R G PD Y LI+ K + KA F++M E PN++ YN++L F
Sbjct: 619 RGKGIAPDVFSYGVLINGF----SKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFC 673
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++G++E+ L ++ + P+ TY ++D Y K G + E + MK PD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM---VLNYGKARLKDKAENVF 322
+ L+D + ++ +F + + + P FN++ V +GK LK + N
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-FNALINWVFKFGKTELKTEVLNRL 792
Query: 323 KQMTEMGYA-PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
+ + P+ VT+ +I + AKELF + + + V T ++L+ Y
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
E +F A + + PD Y ++ A+ K
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 5/317 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y ++ M G A + EM +GCRP+ +Y +LI L + A+
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN----SRFGDAMRVL 475
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++MK + P+I YN ++ ++A ++++ S ++ E+ + P+ +TY + Y +
Sbjct: 476 KEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ + M+ P+ + LI+ Y KK + + ++S++ T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ ++ K D AE +F++M G AP ++ LI + + KA +FD +V
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXX 421
E + V N +L +C + ++A L + P+A TY + Y K+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 422 XXXXXXXXXXXXGIIPN 438
G++P+
Sbjct: 715 EAFRLFDEMKLKGLVPD 731
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 13/322 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y I VM K+G A LF M +G P Y SLI + ++ +
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG------- 401
Query: 181 FEKMKGMERCKPNIV----TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
+E + M+ K NIV TY +++ +G ++ ++ K++ S P++ Y ++
Sbjct: 402 YELLVEMK--KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+ + + +L MK PD+ +N LI K ++ D+ ++ + K
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P+ T+ + + Y +A A+ K+M E G P+ V LI Y V +A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ +V+ + T +++ N+ +A+ +F+ R + PD +Y +L ++K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 417 ANSXXXXXXXXXXXXXXGIIPN 438
+ G+ PN
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPN 661
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 153/365 (41%), Gaps = 55/365 (15%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L L K+DK E+FR M + + D Y LI+ K G + A +F EM
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
G P+ +YN L+ S + KA K L +KG+ PN VTY I+ + ++
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKA--KELLDEMSVKGLH---PNAVTYCTIIDGYCKS 710
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ--C----- 260
G + + LF ++ + PD + Y ++D + + ++E +T +N+ C
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTNKKGCASSTA 767
Query: 261 ----------------------------------KPDLITFNLLIDSYGKKQQFDKMEQV 286
KP+ +T+N++ID K+ + +++
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
F + + P++ T+ S++ Y K + + VF + G P + + +I +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 347 CDCVSKAKELFDGL-----VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+KA L D + V+ ++ +ST A+L + + A+ + + ++ +
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 402 PDAST 406
PD++T
Sbjct: 948 PDSAT 952
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 104 EVFRWMQ--KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E FR K + + D+ VY+ L+ + A+ +F + GC T+ +N+LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALI 773
Query: 162 SAHLH---SRDKTKALAKAL-GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
+ + KT+ L + + G F++ KPN VTYNI++ + G +E LF
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFG-----KPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 218 KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
+ + + P + TY +++ Y K G EM + + +PD I ++++I+++ K+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 278 QQFDK----MEQVF-KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
K ++Q+F K+ + K S+ T +++ + K + AE V + M + Y P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 333 SFVTHESLI 341
T LI
Sbjct: 949 DSATVIELI 957
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 161/381 (42%), Gaps = 19/381 (4%)
Query: 65 SDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV--- 121
+ KE + L+K +RL+ E + + L H K + ++ + + K M GV
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD---MVSKGVTLD 503
Query: 122 ---YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
Y+ LI V K G A+ EM+ G D YN LIS L K +
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML----KFGKVGADW 559
Query: 179 GYFEKMKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
Y KGM +P+I T+NI++ + + G E + L+ + + P + + N V+
Sbjct: 560 AY----KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+ G + E +L +M + P+L T+ + +D+ K ++ D + + ++LL K
Sbjct: 616 GMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
S +N+++ K + KA V M G+ P VT SL++ Y V KA
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ ++E+ + V+T N ++ L +E D +S + PD TY L K
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 417 ANSXXXXXXXXXXXXXXGIIP 437
+ G++P
Sbjct: 796 IGNMKGSMTIYCEMIADGLVP 816
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 20/314 (6%)
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
+ + R D Y+ +IS + + G A SEM G PDT YN+LI
Sbjct: 151 LLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK-- 208
Query: 169 DKTKALAKALGYFEKMKGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVS 226
+G F + K + E + N++T+ I+L ++ +E+ ++D+ S
Sbjct: 209 ---------VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFD 256
Query: 227 PDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
PD+ T++ +++ K G + E +L M+ P+ +T+ L+DS K + +
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
+ ++ L + ++ KA +AE FK + E P+ VT+ +L+ G
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD--GL 374
Query: 347 CDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
C +S A+ + ++E V V T ++M++ Y + +EA SL ++ V+P+
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 405 STYKLLYKAYTKAN 418
TY + KA
Sbjct: 435 FTYGTVIDGLFKAG 448
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G + VYN+LI A L TK A +G E +G P+ VT+N ++ +
Sbjct: 673 GIKLSRQVYNTLI-ATLCKLGMTKKAAMVMGDMEA-RGF---IPDTVTFNSLMHGYFVGS 727
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
V + S + + E+ +SP++ TYN ++ G+I+E++ L+ MKS +PD T+N
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LI K ++ ++ P T+N ++ + +A + K+M +
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 329 GYAPSFVTHESLIYMYGFC 347
G +P+ T+ ++I G C
Sbjct: 848 GVSPNTSTYCTMI--SGLC 864
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 15/298 (5%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
++S+M G PD N LI HS K L+ A+ + VTYN +
Sbjct: 116 IYSKMIACGVSPDVFALNVLI----HSFCKVGRLSFAISLLRN----RVISIDTVTYNTV 167
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ + G ++ ++ + + PD +YN ++D + K G +A++ +
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS---- 223
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+ +LIT +L+ SY +E+ ++ ++ S P + TF+S++ K +
Sbjct: 224 ELNLITHTILLSSY---YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
+ ++M EM P+ VT+ +L+ + A L+ +V + + + ++D
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+EA+ F+ +P+ TY L KA +IPN
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D +S +I+ + K G+ L EM P+ Y +L+ + K A
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF----KANIYRHA 313
Query: 178 LGYFEKMKGMERCKP-NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
L + +M + R P ++V Y +++ +AG + + FK L E P++ TY ++
Sbjct: 314 LALYSQM--VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D K G + E ++T+M P+++T++ +I+ Y KK ++ + + +
Sbjct: 372 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVV 431
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P+ T+ +++ KA ++ A + K+M +G + ++L+ + + K L
Sbjct: 432 PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGL 491
Query: 357 FDGLVESKVQIKVSTLNAMLDVY 379
+V V + +++DV+
Sbjct: 492 VKDMVSKGVTLDQINYTSLIDVF 514
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 129/298 (43%), Gaps = 12/298 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ + K G A ++ ++M P+ Y+S+I+ ++ K L +A+
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV----KKGMLEEAVSLL 422
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM+ + PN TY ++ +AGK E L K++ V + Y + +++ +
Sbjct: 423 RKMED-QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G I+E++ ++ M S D I + LID + K + + + + +
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 302 FNSMV---LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+N ++ L +GK A+ +K M E G P T ++ +L+D
Sbjct: 542 YNVLISGMLKFGKV----GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ ++ + + N ++ + C N +EA + + +++ P+ +TY++ +K
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 192 PNIVTYNIILRAFAQAGKV-EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
P+ +N ++ F G V +QV+ ++ + VSPD++ N ++ ++ K G +
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG---RLSF 147
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
++ +++ D +T+N +I + D+ Q +++ P ++N+++ +
Sbjct: 148 AISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
K +A+ + +++E+ + +TH L+ Y + +A + +V S V
Sbjct: 208 KVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVV 260
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
T +++++ C E L + + V P+ TY L + KAN
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VYS +S + G A +F E+ G PD Y ++I + + KA Y
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ----Y 430
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F + P++ T I++ A ++ G + S+F+++ + D+ TYN +M YG
Sbjct: 431 FGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K + ++ ++ M+S PD+ T+N+LI S + D+ ++ L+R PS
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
F ++ + K +A ++ M ++ P VT +L++ Y + KA LF+ L
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+++ ++ V N ++ YC ++A L +LP+ ST+ L
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 11/264 (4%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
+ D Y+ +I G+T A F + +G P + LI A + +++
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC----SRFGSIS 460
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE---SIVSPDIYTY 232
A F MK E K ++VTYN ++ + GK Q+N +F+ +DE + +SPD+ TY
Sbjct: 461 DAESVFRNMK-TEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
N ++ + RG I E +++ + P + F +I + K+ F + ++ +
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ KP + T ++++ Y KA+ +KA +F ++ + G P V + +LI+ Y + K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 353 AKELFDGLVESKVQIKVSTLNAML 376
A EL +V+ + ST +A++
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALV 660
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 125/289 (43%), Gaps = 5/289 (1%)
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
RP+ VY+S +S + D +A FE G+ P+ V Y ++ + G+
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL--GL---LPDCVCYTTMIDGYCNLGRT 424
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++ F L +S P + T ++ A + G I + E++ MK+ K D++T+N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+ YGK Q +K+ ++ + + P + T+N ++ + D+A + ++ G+
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
PS + +I + +A L+ + + +++ V T +A+L YC ++A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 391 LFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
LF + + PD Y L Y G++PN+
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 9/238 (3%)
Query: 179 GYFEK----MKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
GYF+K + GM+ +P+IV + + + +AG +++ S+ L +S D +
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ V+D + K G + E + + S + +P++ ++ + + + +F+ +
Sbjct: 345 SSVIDGFCKVG---KPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
P + +M+ Y DKA F + + G PS T LI +S
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A+ +F + +++ V T N ++ Y + + L RS + PD +TY +L
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VFR M+ + + D Y+ L+ GK Q L EMR+ G PD + YN LI
Sbjct: 465 VFRNMKTEGLKL-DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI--- 520
Query: 165 LHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
HS + +A ++ +G P+ + + ++ F++ G ++ L+ + +
Sbjct: 521 -HSMVVRGYIDEANEIISELIRRGF---VPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ PD+ T + ++ Y K + + + ++ KPD++ +N LI Y +K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
++ +++ P+ T +++VL R + + + E+ A +T
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLT 690
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VYS +S + G A +F E+ G PD Y ++I + + KA Y
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ----Y 430
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F + P++ T I++ A ++ G + S+F+++ + D+ TYN +M YG
Sbjct: 431 FGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K + ++ ++ M+S PD+ T+N+LI S + D+ ++ L+R PS
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
F ++ + K +A ++ M ++ P VT +L++ Y + KA LF+ L
Sbjct: 550 AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+++ ++ V N ++ YC ++A L +LP+ ST+ L
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 11/264 (4%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
+ D Y+ +I G+T A F + +G P + LI A + +++
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC----SRFGSIS 460
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE---SIVSPDIYTY 232
A F MK E K ++VTYN ++ + GK Q+N +F+ +DE + +SPD+ TY
Sbjct: 461 DAESVFRNMK-TEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
N ++ + RG I E +++ + P + F +I + K+ F + ++ +
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ KP + T ++++ Y KA+ +KA +F ++ + G P V + +LI+ Y + K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 353 AKELFDGLVESKVQIKVSTLNAML 376
A EL +V+ + ST +A++
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALV 660
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 125/289 (43%), Gaps = 5/289 (1%)
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
RP+ VY+S +S + D +A FE G+ P+ V Y ++ + G+
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL--GL---LPDCVCYTTMIDGYCNLGRT 424
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++ F L +S P + T ++ A + G I + E++ MK+ K D++T+N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+ YGK Q +K+ ++ + + P + T+N ++ + D+A + ++ G+
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
PS + +I + +A L+ + + +++ V T +A+L YC ++A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 391 LFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
LF + + PD Y L Y G++PN+
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 9/238 (3%)
Query: 179 GYFEK----MKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
GYF+K + GM+ +P+IV + + + +AG +++ S+ L +S D +
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSV 344
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ V+D + K G + E + + S + +P++ ++ + + + +F+ +
Sbjct: 345 SSVIDGFCKVG---KPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
P + +M+ Y DKA F + + G PS T LI +S
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A+ +F + +++ V T N ++ Y + + L RS + PD +TY +L
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VFR M+ + + D Y+ L+ GK Q L EMR+ G PD + YN LI
Sbjct: 465 VFRNMKTEGLKL-DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI--- 520
Query: 165 LHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
HS + +A ++ +G P+ + + ++ F++ G ++ L+ + +
Sbjct: 521 -HSMVVRGYIDEANEIISELIRRGF---VPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ PD+ T + ++ Y K + + + ++ KPD++ +N LI Y +K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
++ +++ P+ T +++VL R + + + E+ A +T
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLT 690
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 6/287 (2%)
Query: 133 GQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKP 192
G A +F EM G PD+S Y ++ +A G + +G P
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ--RGF---IP 250
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
+ T +IL A + G V + F+ + + P++ + ++D K+G I++ ML
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGK 311
M N KP++ T LID K+ +K ++F L+RS KP++ T+ SM+ Y K
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
++AE +F +M E G P+ T+ +LI + +A EL + + + + T
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
NA +D C + EA L +A S + D TY +L + K N
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 148/340 (43%), Gaps = 12/340 (3%)
Query: 104 EVFRWMQK--QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E RW+ QR ++ DN + +++ + + G A+W F +M + G +P+ + SLI
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
K ++ +A FE ++ M R KPN+ T+ ++ + G E+ LF
Sbjct: 295 DGLC----KKGSIKQA---FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK 347
Query: 220 LDES-IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
L S P+++TY ++ Y K + E + +RMK P++ T+ LI+ + K
Sbjct: 348 LVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
F + ++ + P++ T+N+ + + K +A + + G VT+
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
LI + +++A F + ++ + + N ++ +C +E++ LFQ S+
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 399 KVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
++P TY + Y K G +P+
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 6/268 (2%)
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
L +A+G M+ + P+ +T N +L + G +E ++F ++ V PD +Y
Sbjct: 163 LNEAVGMVMDMQN-QGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
++ + G I+E + LT M PD T L++ + + ++ F+ ++
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVS 351
KP+L F S++ K +A + ++M G+ P+ TH +LI G C
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI--DGLCKRGWTE 339
Query: 352 KAKELFDGLVESKV-QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
KA LF LV S + V T +M+ YC + A+ LF R + + P+ +TY L
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 411 YKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ KA S G +PN
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPN 427
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 25/282 (8%)
Query: 83 TEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLF 142
TE F LF +L + D + P + Y+ +I K+ + A LF
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHT----------------YTSMIGGYCKEDKLNRAEMLF 381
Query: 143 SEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILR 202
S M+ G P+ + Y +LI+ H K + +A M G E PNI TYN +
Sbjct: 382 SRMKEQGLFPNVNTYTTLINGHC----KAGSFGRAYELMNLM-GDEGFMPNIYTYNAAID 436
Query: 203 AFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP 262
+ + + + L + D TY ++ K+ I + A RM +
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
D+ N+LI ++ ++++ + E++F+ ++ P+ T+ SM+ Y K D A F
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVE 362
M G P T+ SLI G C V +A +L++ +++
Sbjct: 557 HNMKRHGCVPDSFTYGSLI--SGLCKKSMVDEACKLYEAMID 596
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 13/312 (4%)
Query: 114 WY---MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
WY M D G ++ LI + KKG + A + EM G +P+ + +LI
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG- 331
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
L R T+ KA F K+ + KPN+ TY ++ + + K+ + LF + E
Sbjct: 332 LCKRGWTE---KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+ P++ TY +++ + K G ++ M P++ T+N IDS KK + +
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
++ + T+ ++ K ++A F +M + G+ + LI +
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
+ +++ LF +V + T +M+ YC A F + +PD+
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 405 STYKLLYKAYTK 416
TY L K
Sbjct: 569 FTYGSLISGLCK 580
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 32/355 (9%)
Query: 51 SETRELVRLLTRKIS-DKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWM 109
+T+E ++LL I D+EP T N ++ +L K +E+ M
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYN------------IIINKLCKDGLVADAVEIVELM 378
Query: 110 QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM--RNTGCRPDTSVYNSLISAHLHS 167
+K+R DN Y+ L+ + KG A L M ++ PD YN+LI H
Sbjct: 379 KKRR-TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI----HG 433
Query: 168 RDKTKALAKALGYF----EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
K L +AL + EK+ +R VT NI+L + +AG V + L+K + +S
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDR-----VTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ + TY ++D + K GM+ + +L +M+ ++ +P + +N L+ S K+ D+
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
++F+ + R P + +FN M+ KA AE++ M+ G +P T+ LI
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
+ + +A FD +V+S + +++L YCI+ E D L + + +
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQ--GETDKLTELVKKL 660
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 13/333 (3%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F + GK D+ + L+ ++M + AD VY+ LI G+ LF E+ G
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLE----ADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER-CKPNIVTYNIILRAFAQAG 208
P YN+LI K L +A FE M +ER +PN+ TY ++ G
Sbjct: 278 DSPCAITYNTLIRGFC----KLGQLKEASEIFEFM--IERGVRPNVYTYTGLIDGLCGVG 331
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K ++ L + E P+ TYN +++ K G++ + ++ MK + +PD IT+N
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLR--SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+L+ K D+ ++ +L+ S P + ++N+++ K +A +++ +
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
E A VT L+ V+KA EL+ + +SK+ T AM+D +C +
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
A L + R ++ P Y L + K S
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P++ +YN ++R F + ++E+ L ++ S S + T+ ++DA+ K G + E
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L MK + DL+ + LI + + D+ + +F +L + P T+N+++ + K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE---LFDGLVESKVQIK 368
+A +F+ M E G P+ T+ LI G C V K KE L + ++E +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLI--DGLCG-VGKTKEALQLLNLMIEKDEEPN 351
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
T N +++ C + L +A + + + + PD TY +L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
N+ +NI+L+ + + + SL +++ + + PD+++YN V+ + + + + +
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA 312
MK + C L+T+ +LID++ K + D+ K + + L + S++ +
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 313 RLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVS 370
D+ + +F ++ E G +P +T+ +LI GFC + +A E+F+ ++E V+ V
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLI--RGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
T ++D C +EA L P+A TY ++ K
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 11/321 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI K GQ + A +F M G RP+ Y LI L KTK +AL
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG-LCGVGKTK---EALQLL 340
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M + +PN VTYNII+ + G V + + + + PD TYN ++
Sbjct: 341 NLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 242 RGMIREMEAMLTRM--KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+G + E +L M S+ PD+I++N LI K+ + + ++ L+
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELF 357
T N ++ + KA +KA ++KQ+++ + T+ ++I GFC ++ AK L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI--DGFCKTGMLNVAKGLL 517
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ S++Q V N +L C +A LF+ + PD ++ ++ KA
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 418 NSXXXXXXXXXXXXXXGIIPN 438
G+ P+
Sbjct: 578 GDIKSAESLLVGMSRAGLSPD 598
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I K G +A L +MR + +P YN L+S S K +L +A F
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS----SLCKEGSLDQAWRLF 552
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E+M+ + P++V++NI++ +AG ++ SL + + +SPD++TY+ +++ + K
Sbjct: 553 EEMQ-RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
G + E + +M + +PD + ++ + + DK+ ++ K L+
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 36/279 (12%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
YN +L + A+ G VE++ L+ ++ E +VSPDIYT+N +++ Y K G + E + +T +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS--------------------------- 289
C PD T+ I + ++++ D +VFK
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 290 -----LLRSKEK---PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
L++ K+ P++ T+ ++ + K +A N+FKQM+E G P + LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+ D + +A L + ++E+ + V T NA++ +C N+ +A L + ++
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLV 361
Query: 402 PDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKR 440
PD TY L + + G++PN+R
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQR 400
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ I+ ++ + A +F EM GC + Y LI + K + +A
Sbjct: 189 DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA----KKIDEA 244
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L KMK + C PN+ TY +++ A +G+ + +LFK + ES + PD Y ++
Sbjct: 245 LSLLVKMKD-DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
++ + E +L M N P++IT+N LI + KK M + +L P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAM-GLLSKMLEQNLVP 362
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
L T+N+++ + D A + M E G P+
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 20/292 (6%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+S + + G L++EM PD +N+L++ + LGY
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK-----------LGYV 171
Query: 182 EKMKG------MERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+ K C P+ TY + + +V+ +FK++ ++ + +Y +
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ + I E ++L +MK + C P++ T+ +LID+ Q + +FK + S
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC-DCVSKAK 354
KP + ++ ++ D+A + + M E G P+ +T+ +LI GFC V KA
Sbjct: 292 KPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI--KGFCKKNVHKAM 349
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
L ++E + + T N ++ C + A L ++P+ T
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 143/298 (47%), Gaps = 9/298 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ I + + + A +F M+ G P+ Y+++I + KT + +A G
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC----KTGNVRQAYGL 291
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
++++ E PN+V + ++ F +A ++ SLF + + V P++Y YN ++ +
Sbjct: 292 YKEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G + E +L+ M+S PD+ T+ +LI+ + Q + ++F+ + + PS
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFD 358
T+NS++ Y K ++A ++ +MT G P+ +T +LI G+C+ + A L+
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI--DGYCNVRDIKAAMGLYF 468
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + V T A++D + +EA L+ + P+ T+ L + K
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 149/351 (42%), Gaps = 37/351 (10%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR-------DKTK 172
GV+S LI + G A+W+ EM+ C PD+ S+++ + R D
Sbjct: 133 GVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQL 189
Query: 173 ALAKALG------------------YFEKMKGMER-----CKPNIVTYNIILRAFAQAGK 209
+++ L Y +K K ++ KPN+ Y I + + K
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
+E+ +F+ + + V P++YTY+ ++D Y K G +R+ + + + P+++ F
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
L+D + K ++ +F +++ P+L +N ++ + K+ +A + +M +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 330 YAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQE 387
+P T+ LI G C D V++A LF + ++ +T N+++ YC ++
Sbjct: 370 LSPDVFTYTILI--NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 388 ADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
A L + V P+ T+ L Y GI+P+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 145/367 (39%), Gaps = 44/367 (11%)
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
+ K+ + + YS +I K G R A L+ E+ P+ V+ +L+ +R
Sbjct: 259 LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 169 DKTKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVS 226
+ L A F M G++ PN+ YN ++ ++G + + L +++ +S
Sbjct: 319 E----LVTARSLFVHMVKFGVD---PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 227 PDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
PD++TY +++ + E + +MK+ + P T+N LI Y K+ ++ +
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
+ S +P++ TF++++ Y R A ++ +MT G P VT+ +LI +
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY--------------------------- 379
+ +A L+ ++E+ + T ++D +
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG 551
Query: 380 --------CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXX 431
C N A F RS + PD +Y + K + +
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 432 XXGIIPN 438
GI+PN
Sbjct: 612 KTGILPN 618
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 103/239 (43%), Gaps = 3/239 (1%)
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F ++ ++ K +I +++++ F + G E+ + +++ SPD +++
Sbjct: 119 FNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLV 175
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+R + M S PD+ + +L K+ + K E++ + KP++
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+ +L+ + ++AE +F+ M + G P+ T+ ++I Y V +A L+ +
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+ +++ V ++D +C A SLF V P+ Y L + K+ +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 12/318 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++F+ M+ QR D YS LI K G + LFS+ + G + D V++S I
Sbjct: 306 FDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
++ S D LA A +++M + PN+VTY I+++ Q G++ + ++ + +
Sbjct: 365 VYVKSGD----LATASVVYKRML-CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ P I TY+ ++D + K G +R A+ M PD++ + +L+D K+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+ +L + ++ FNS++ + + D+A VF+ M G P T +++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 343 MYGFCDCVSK------AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+ D K +LFD + +K+ ++ N ++ + + ++A F
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 397 SIKVLPDASTYKLLYKAY 414
K+ PD TY + Y
Sbjct: 600 EGKMEPDIVTYNTMICGY 617
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 136/310 (43%), Gaps = 11/310 (3%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D +Y L+ + K+G AM +M R + V+NSLI +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC----RLNRF 512
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILR------AFAQAGKVEQVNSLFKDLDESIVSPD 228
+AL F M G+ KP++ T+ ++R AF + K LF + + +S D
Sbjct: 513 DEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
I N V+ K I + + + +PD++T+N +I Y ++ D+ E++F+
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
L + P+ T ++ K D A +F M E G P+ VT+ L+ +
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
+ + +LF+ + E + + + + ++D C EA ++F +A K+LPD Y
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 751
Query: 409 LLYKAYTKAN 418
+L + Y K
Sbjct: 752 ILIRGYCKVG 761
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 127/282 (45%), Gaps = 21/282 (7%)
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CK 191
Q +A L S + + G P+ + +LI+ + +A F+ K ME+ +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA-------FDLFKVMEQRGIE 318
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+++ Y+ ++ + +AG + + LF V D+ ++ +D Y K G + +
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
RM P+++T+ +LI + + + ++ +L+ +PS+ T++S++ + K
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG------LVESKV 365
+++ M +MGY P V + L+ D +SK + ++ +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLV------DGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 366 QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
++ V N+++D +C N EA +F+ + PD +T+
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 95 KHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDT 154
KH K L++F MQ+ + AD V + +I ++ K + A F+ + PD
Sbjct: 549 KHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
YN++I + R L +A FE +K + PN VT I++ + ++
Sbjct: 608 VTYNTMICGYCSLR----RLDEAERIFELLK-VTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
+F + E P+ TY +MD + K I + M+ P +++++++ID
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
K+ + D+ +F + +K P + + ++ Y K +A +++ M G P
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Query: 335 VTHESL 340
+ +L
Sbjct: 783 LLQRAL 788
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 7/231 (3%)
Query: 137 LAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM-KGMERCKPNIV 195
+ + LF M+ D +V N +I H K + A +F + +G + +P+IV
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVI----HLLFKCHRIEDASKFFNNLIEG--KMEPDIV 608
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
TYN ++ + ++++ +F+ L + P+ T ++ K + M + M
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
KP+ +T+ L+D + K + ++F+ + PS+ +++ ++ K
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ 366
D+A N+F Q + P V + LI Y + +A L++ ++ + V+
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG-VMDAYGKRGMIREMEAMLTRMKSN 258
+L + + +V+ + F L + P + +G V+DA +G + + +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+ +++ N ++ Q + ++ +L P++ TF +++ + K D+A
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
++FK M + G P + + +LI Y + +LF + V++ V ++ +DV
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
Y + A +++R + P+ TY +L K +
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 16/296 (5%)
Query: 109 MQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLH 166
+++Q+ Y M+ G +++IS+ GK G A +F EM N C+ +N+L+SA+
Sbjct: 97 LEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 167 SR--DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
S+ D + L F ++ G KP+IV+YN +++A + + + +L +++
Sbjct: 157 SKKFDVVEEL------FNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+ PDI T+N ++ + +G E + +M D+ T+N + + + ++
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV 270
Query: 285 QVFKSLLRSKEKPSLPTFNSMV---LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+F L S KP + +FN+M+ +N GK D+AE +K++ + GY P T L+
Sbjct: 271 NLFGELKASGLKPDVFSFNAMIRGSINEGKM---DEAEAWYKEIVKHGYRPDKATFALLL 327
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
A ELF + + +TL ++D + +EA+ + + A++
Sbjct: 328 PAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKT 383
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 52/298 (17%)
Query: 84 EHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFS 143
+ C +L L K ++F+ M K +A+ VY+ L+ K G A L S
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLG-VVANIHVYNVLVHACSKSGDPEKAEKLLS 227
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCK-----PNIVTYN 198
EM G PD YN+LIS + K +FE + +R + PNIVTYN
Sbjct: 228 EMEEKGVFPDIFTYNTLISVY----------CKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 199 IILRAFAQAGKVEQVNSLFK------------------------DLDESI---------- 224
+ F++ G++ + LF+ D+DE++
Sbjct: 278 SFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
SP + TYN ++ + G IRE +LT M + +PD IT N LI++Y K +
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKA-RLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+V K ++ S K + ++ +++ + K L++ E +F M E G++P + T+ L+
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF-SMIEKGFSPGYATYSWLV 454
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
KP++ ++L + + + V +FK + + V +I+ YN ++ A K G + E
Sbjct: 165 KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEK 224
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+L+ M+ PD+ T+N LI Y KK + V + RS P++ T+NS + +
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
+ +A +F+++ + + VT+ +LI Y + + +A L + + V
Sbjct: 285 REGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
T N++L C + +EA+ L K+ PD T L AY K
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+ ++ +M Y K GMI + + +++S KP L +L++S K++ D + ++FK
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+++ ++ +N +V K+ +KAE + +M E G P T+ +LI +Y
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+A + D + S V + T N+ + + +EA LF+ + V + TY
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTT 312
Query: 410 LYKAYTKAN 418
L Y + N
Sbjct: 313 LIDGYCRMN 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 115/297 (38%), Gaps = 41/297 (13%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ I ++G+ R A LF E+++ + Y +LI + D +AL L
Sbjct: 276 YNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALR--LREV 332
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP-------------- 227
+ +G P +VTYN ILR + G++ + N L ++ + P
Sbjct: 333 MESRGFS---PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 228 ---------------------DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
D+Y+Y ++ + K + + L M P T
Sbjct: 390 IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYAT 449
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
++ L+D + + + D++ ++ + + + + ++ K D A+ +F+ M
Sbjct: 450 YSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESME 509
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+ G V ++ Y Y V++A LFD + ++ + + ++ Y +N
Sbjct: 510 KKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDN 566
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
++ ++ +A+AG + +F+ + + P + ++++ K+ + + + +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
++ +N+L+ + K +K E++ + P + T+N+++ Y K +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
+A +V +M G AP+ VT+ S I+ + + +A LF ++ V T +
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTL 313
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
+D YC N EA L + S P TY
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTY 345
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 41/335 (12%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
DN Y+ ++ M KKG+ L +M+ G P+ YN+L+ + K +L +A
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC----KLGSLKEA 294
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
E MK P++ TYNI++ AG + + L + + PD+ TYN ++D
Sbjct: 295 FQIVELMK-QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 238 AYGKRGMIREMEAMLTRM-----KSNQ----------CK--------------------- 261
+ G+ E ++ +M K+NQ CK
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
PD++T++ LI +Y K ++ + + + K + T N+++ K R D+A N+
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
+ G+ VT+ +LI + + V KA E++D + + K+ VST N+++ C
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + A F +LPD ST+ + Y K
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAH-LHSRDKTKALAKALGYFEKMKGMERCKPNIVT 196
A +F +M G + +N L++ + L + L ALG E+M + P+ VT
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK-----LEDALGMLERMVSEFKVNPDNVT 242
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
YN IL+A ++ G++ + L D+ ++ + P+ TYN ++ Y K G ++E ++ MK
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV-------LNY 309
PDL T+N+LI+ + ++ ++ K +P + T+N+++ L+
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 310 GKARLKDKAEN----------------------------VFKQMTEM-GYAPSFVTHESL 340
+L ++ EN K++ +M G++P VT+ +L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I Y +S A E+ + + +++ TLN +LD C EA +L A
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 401 LPDASTYKLLYKAY 414
+ D TY L +
Sbjct: 483 IVDEVTYGTLIMGF 496
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 143/320 (44%), Gaps = 16/320 (5%)
Query: 104 EVFRWMQ--KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E F+ ++ KQ + D Y+ LI+ + G R + L M++ +PD YN+LI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
D L +L + M+ ME K N VT+NI L+ + K E V K+
Sbjct: 353 -------DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405
Query: 220 L-DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
L D SPDI TY+ ++ AY K G + M+ M K + IT N ++D+ K++
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ D+ + S + T+ ++++ + + +KA ++ +M ++ P+ T
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 339 SLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
SLI G C A E FD L ES + ST N+++ YC ++A + +
Sbjct: 526 SLI--GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 397 SIKVLPDASTYKLLYKAYTK 416
PD T +L K
Sbjct: 584 KHSFKPDNYTCNILLNGLCK 603
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 10/261 (3%)
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PD Y++LI A+L D L+ AL +M G + K N +T N IL A +
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGD----LSGALEMMREM-GQKGIKMNTITLNTILDALCKER 465
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
K+++ ++L + D TY ++ + + + + M MK + P + TFN
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LI + + + F L S P TFNS++L Y K +KA + + +
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 329 GYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
+ P T I + G C KA F+ L+E + ++ T N M+ +C + +
Sbjct: 586 SFKPDNYTCN--ILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLK 642
Query: 387 EADSLFQRARSIKVLPDASTY 407
EA L + PD TY
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTY 663
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA---FAQAG 208
P ++++ +SA+LH AL F+KM + + KPN++T N +L + +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQ----IFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSF 183
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN-QCKPDLITF 267
+ +F D+ + VS ++ T+N +++ Y G + + ML RM S + PD +T+
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
N ++ + KK + ++++ + ++ P+ T+N++V Y K +A + + M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 328 MGYAPSFVTHESLIYMYGFCDCVS--KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
P T+ LI G C+ S + EL D + K+Q V T N ++D L
Sbjct: 304 TNVLPDLCTYNILI--NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYK 412
EA L ++ + V + T+ + K
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLK 388
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
++ LI + G+T LAM F E+ +G PD S +NS+I + K + KA +
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC----KEGRVEKAFEF 578
Query: 181 F-EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+ E +K KP+ T NI+L + G E+ + F L E D TYN ++ A+
Sbjct: 579 YNESIK--HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAF 635
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
K ++E +L+ M+ +PD T+N I + + + +++ K
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R ++ D Y LI ++ + A+ ++ EM+ P S +NSLI H
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
A+ K F+++ P+ T+N I+ + + G+VE+ + + + PD YT
Sbjct: 539 LAMEK----FDEL-AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
N +++ K GM + + + + D +T+N +I ++ K ++ + + +
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 292 RSKEKPSLPTFNSMV 306
+P T+NS +
Sbjct: 653 EKGLEPDRFTYNSFI 667
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
P F++ + +Y + + Q+F+ ++R K KP+L T N++++ G R
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI--GLVR-------- 178
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
Y SF +S A+E+FD +V+ V + V T N +++ YC+
Sbjct: 179 --------YPSSF--------------SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL 216
Query: 382 NNLPQEADSLFQRARS-IKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
++A + +R S KV PD TY + KA +K G++PN+
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR 275
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 147/356 (41%), Gaps = 63/356 (17%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ ++S ++G+ + + +MR G PD +NS ISA L K ++
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA-LCKEGKVLDASRIFSD 277
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI---------------- 224
E + + +PN +TYN++L+ F + G +E +LF+ + E+
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV 337
Query: 225 -------------------VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+ P IY+YN +MD K GM+ + + ++ MK N PD +
Sbjct: 338 RHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T+ L+ Y + D + + + ++R+ P+ T N ++ + K +AE + ++M
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457
Query: 326 TEMGYAPSFVTHESLIYMYGFCDC--VSKAKELF-----------------------DGL 360
E GY VT I + G C + KA E+ D L
Sbjct: 458 NEKGYGLDTVTCN--IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+E+ + T + +L+ C EA +LF K+ PD+ Y + + K
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 144/359 (40%), Gaps = 45/359 (12%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGV------YSKLISVMGKKGQTRLAMWLFS 143
+ L +H K++ V + M D G+ Y+ L+ + K G A +
Sbjct: 333 LQGLVRHGKFIEAETVLK-------QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 144 EMRNTGCRPDTSVYNSLISAH--LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIIL 201
M+ G PD Y L+ + + D K+L + E M+ C PN T NI+L
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ-----EMMR--NNCLPNAYTCNILL 438
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK----- 256
+ + G++ + L + ++E D T N ++D G + + ++ M+
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 257 ------------------SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
N C PDLIT++ L++ K +F + + +F ++ K +P
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+N + ++ K A V K M + G S T+ SLI G + + + L D
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ E + + T N + C ++A +L + P+ ++K L +A+ K
Sbjct: 619 EMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 140/339 (41%), Gaps = 52/339 (15%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ L+ K+ + WL+ +M G P T +N LI A S + A
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDS----SCVDAAREL 169
Query: 181 FEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
F++M KG CKPN T+ I++R + +AG ++ L ++ V P+ YN ++ +
Sbjct: 170 FDEMPEKG---CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK---- 294
+ + G + E M+ +M+ PD++TFN I + K+ + ++F + +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 295 EKPSLPTFNSMVLNYGKARLKD-----------------------------------KAE 319
+P+ T+N M+ + K L + +AE
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
V KQMT+ G PS ++ I M G C +S AK + + + V T +L
Sbjct: 347 TVLKQMTDKGIGPSIYSYN--ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
YC A SL Q LP+A T +L + K
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 4/252 (1%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
KP++ YN++L + + +VE V+ L+KD+ ++P YT+N ++ A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ M CKP+ TF +L+ Y K DK ++ ++ P+ +N++V ++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL-VESKVQI-- 367
+ D +E + ++M E G P VT S I V A +F + ++ + +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 368 -KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXX 426
T N ML +C L ++A +LF+ R L +Y + + +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 427 XXXXXXXGIIPN 438
GI P+
Sbjct: 349 LKQMTDKGIGPS 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 18/276 (6%)
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
C +L L K + E+ R M ++ Y D + ++ + G+ A+ + M
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMN-EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
R G ++ NS I G + C P+++TY+ +L
Sbjct: 493 RVHGSAALGNLGNSYI-----------------GLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+AG+ + +LF ++ + PD YN + + K+G I +L M+ C L
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T+N LI G K Q ++ + + P++ T+N+ + + + A N+ +M
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ AP+ + + LI + A+E+F+ V
Sbjct: 656 MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Query: 200 ILRAFAQAGKVEQVNSLFK-DLDESIVSPDIYTYNGVMDAYGKRGMIREM--EAMLTRMK 256
I R +A E++ L L SI + + V+ + K I + + L R +
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSR 104
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+ KP + +NLL++S K+++ + + ++K ++ P TFN ++ + D
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
A +F +M E G P+ T L+ Y K EL + + V N ++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+C +++ + ++ R ++PD T+ A K
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 5/313 (1%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
F W KQ+ Y D Y+ + + G R A L M + G P + LI H
Sbjct: 145 FHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHA 204
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
+R + +EKMK KP + YN I+ A + G + ++++D E +
Sbjct: 205 DNRRGLRVYY----VYEKMKKF-GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGL 259
Query: 226 SPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ 285
+ T+ ++ K G I EM +L RM+ N CKPD+ + +I + + D +
Sbjct: 260 VEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLR 319
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
V+ + R + KP + + ++V+ K ++ +F +M + LI +
Sbjct: 320 VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFV 379
Query: 346 FCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAS 405
V A L++ LV+S + NA++ C N +A LFQ A ++ PD
Sbjct: 380 ADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 406 TYKLLYKAYTKAN 418
T + AY N
Sbjct: 440 TLSPIMVAYVVMN 452
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 137/303 (45%), Gaps = 14/303 (4%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+ + ++ + L+ + K G+ + + MR C+PD Y ++I + +
Sbjct: 255 KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGN- 313
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
L +L +++M+ + KP+++ Y ++ + G+VE+ LF ++ + D
Sbjct: 314 ---LDASLRVWDEMR-RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDRE 369
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
Y +++ + G +R + + + D+ +N +I Q DK ++F+
Sbjct: 370 IYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVA 429
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS-FVTHESLIYMYGFCDC 349
+ + +P T + +++ Y NV +++ E+GY S ++T + C
Sbjct: 430 IEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQ----FFKLLCAD 485
Query: 350 VSKAKELFDG--LVESKVQIKVSTLNAMLD-VYCINNLPQEADSLFQRARSIKVLPDAST 406
K D ++++K VS N +++ +Y + ++ Q++ SLF R + PD+S+
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDI-QKSLSLFYEMRKLGFEPDSSS 544
Query: 407 YKL 409
Y +
Sbjct: 545 YSI 547
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 12/348 (3%)
Query: 98 KWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY 157
+W F W++ + + + Y+ + + Q +L + EM G D Y
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 158 NSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNS 215
+++I+ + KA+ +FE+M G+ P+ VTY+ IL ++++GKVE+V S
Sbjct: 225 STIITCA----KRCNLYNKAIEWFERMYKTGL---MPDEVTYSAILDVYSKSGKVEEVLS 277
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
L++ + PD ++ + +G+ G + +L MKS KP+++ +N L+++ G
Sbjct: 278 LYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMG 337
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
+ + +F +L + P+ T ++V YGKAR A ++++M + F+
Sbjct: 338 RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFI 397
Query: 336 THESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN--AMLDVYCINNLPQEADSLFQ 393
+ +L+ M +A+ LF+ + ES VQ + + AML++Y ++A LF+
Sbjct: 398 LYNTLLNMCADIGLEEEAERLFNDMKES-VQCRPDNFSYTAMLNIYGSGGKAEKAMELFE 456
Query: 394 RARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRF 441
V + L + KA G+ P+ R
Sbjct: 457 EMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 44/299 (14%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
M D YS ++ V K G+ + L+ TG +PD ++ L + D
Sbjct: 253 MPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD-----Y 307
Query: 176 KALGY-FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ Y ++MK M+ KPN+V YN +L A +AGK SLF ++ E+ ++P+ T
Sbjct: 308 DGIRYVLQEMKSMD-VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 235 VMDAYGKR-----------------------------------GMIREMEAMLTRMK-SN 258
++ YGK G+ E E + MK S
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
QC+PD ++ +++ YG + +K ++F+ +L++ + ++ +V GKA+ D
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
VF + G P L+ + C+ A+++ L + ++ V+ +N ++D
Sbjct: 487 VYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKL-VTFVNLIVD 544
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYN 198
L+ +R +G + +YN +I+ + L + G FE+M G PN VT+N
Sbjct: 651 LYYRIRKSGIHWNQEMYNCVINCCA----RALPLDELSGTFEEMIRYGF---TPNTVTFN 703
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
++L + +A ++VN LF L + D+ +YN ++ AYGK M + + M+ +
Sbjct: 704 VLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
L +N L+D+YGK +Q +K + K + +S P T+N M+ YG+ D+
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
+V K++ E G P ++ +LI YG V +A L
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
YN ++ A+A +++++ F+++ +P+ T+N ++D YGK + +++ + K
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+ D+I++N +I +YGK + + M K++ SL +N+++ YGK + +
Sbjct: 727 RHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME 785
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
K ++ K+M + P T+ +I +YG + + ++ L ES + + + N ++
Sbjct: 786 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
Y I + +EA L + R ++PD TY L A
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
Query: 142 FSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIIL 201
F EM G P+T +N L+ ++ + K L K G+ ++++YN I+
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLD--VYGKAKLFKKVNELFLLAKRHGV----VDVISYNTII 740
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
A+ + ++S K++ S + YN ++DAYGK + + ++L RMK +
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
PD T+N++I+ YG++ D++ V K L S P L ++N+++ YG + ++A +
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 322 FKQMTEMGYAPSFVTHESLI 341
K+M P VT+ +L+
Sbjct: 861 VKEMRGRNIIPDKVTYTNLV 880
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 137/306 (44%), Gaps = 28/306 (9%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
+++ ++G+ LA + M G P+ YN+LI+ + K + A G F ++
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGY----GKIFKMEAAQGLFHRL 375
Query: 185 --KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD---IYTYNGVMDAY 239
G+E P+ +Y ++ + +A E+ +++L P+ ++T + Y
Sbjct: 376 CNIGLE---PDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKY 432
Query: 240 GKR-GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
G R G I+ +E M C+ I +++ +Y K + D + V K + + +
Sbjct: 433 GDRDGAIKTIE----DMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLN 487
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC-----VSKA 353
+F+S+V+ Y K + D + ++ A ES +Y C C ++ A
Sbjct: 488 QTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA-----FESHLYHLLICSCKESGQLTDA 542
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++++ +ES +I + + M+D+Y + EA+ L+ +S V+ D + ++ +
Sbjct: 543 VKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRM 602
Query: 414 YTKANS 419
Y KA S
Sbjct: 603 YVKAGS 608
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 17/280 (6%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
L+ LG+ ++W ++ + + + V++ +I KKG +LA F M
Sbjct: 179 LILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLE 238
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM----ERCKPNIVTYNIILRA 203
G RP+ + L+ + K + +A F M+ E +++T LR
Sbjct: 239 FGVRPNVATIGMLMGLY----QKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRL 294
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+ +A E+V L K + V + + +++AY ++G + E++L M++ P+
Sbjct: 295 YDKA---EEVIDLMK---QDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPN 348
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
+I +N LI YGK + + + +F L +P ++ SM+ +G+A ++A++ ++
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 324 QMTEMGYAPSFVTHESLIYM---YGFCDCVSKAKELFDGL 360
++ GY P+ +LI + YG D K E G+
Sbjct: 409 ELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L + GK + E+F + +R + D Y+ +I+ GK M+
Sbjct: 704 VLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQF 761
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
G YN+L+ A+ K K + K ++MK P+ TYNI++ + +
Sbjct: 762 DGFSVSLEAYNTLLDAY----GKDKQMEKFRSILKRMK-KSTSGPDHYTYNIMINIYGEQ 816
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G +++V + K+L ES + PD+ +YN ++ AYG GM+ E ++ M+ PD +T+
Sbjct: 817 GWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Query: 268 NLLIDSYGKKQQF 280
L+ + + +F
Sbjct: 877 TNLVTALRRNDEF 889
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 16/273 (5%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSR---DKTKALAKAL-GYFEKMKGMERCKPN 193
A+ F MR G V SLI L R D+ + L K L G+ E K +
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQ----- 211
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
+N ++ A + G V+ + F + E V P++ T +M Y K + E E +
Sbjct: 212 --VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFS 269
Query: 254 RMK--SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
M+ C+ ++ +I Y + + +DK E+V + + + + L + M+ Y +
Sbjct: 270 HMRKFGIVCES---AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQ 326
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
+ AE++ M G++P+ + + +LI YG + A+ LF L ++ ++
Sbjct: 327 QGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETS 386
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
+M++ + + +EA +Q + P++
Sbjct: 387 YRSMIEGWGRADNYEEAKHYYQELKRCGYKPNS 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 129/326 (39%), Gaps = 7/326 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y +I G+ A + E++ G +P++ +LI+ D+ A+
Sbjct: 383 DETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKT- 441
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
E M G+ +I+ IIL+A+ + GK++ V + K + + + +++ ++
Sbjct: 442 ---IEDMTGIGCQYSSIL--GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVM 496
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
AY K GM+ + +L K + ++LLI S + Q +++ + S E+
Sbjct: 497 AYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEI 556
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+L ++M+ Y +AE ++ + G + ++ MY + +A +
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 358 DGLVESK-VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + E K + V ML +Y +L + L+ R R + + Y + +
Sbjct: 617 EIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCAR 676
Query: 417 ANSXXXXXXXXXXXXXXGIIPNKRFF 442
A G PN F
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTF 702
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 141/317 (44%), Gaps = 47/317 (14%)
Query: 102 CLEVFRWMQKQRWYMADN--------------------------------------GVYS 123
L +FRW +KQ WY+ + Y+
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 124 KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEK 183
++I + K + +A F + + +GC+ DT YN+L+ L+ KA FE
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKA-------FEI 300
Query: 184 MKGMERCKPNI--VTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ ME+ + TY +I+ + A++G+++ LF+ + E + P ++ ++D+ GK
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + M+ +P F LIDSY K + D +++ + +S +P+
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ ++ ++ K+ + A VFK M + G+ P+ T+ L+ M+ V A ++++ +
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 362 ESKVQIKVSTLNAMLDV 378
+ ++ +S+ ++L +
Sbjct: 481 NAGLRPGLSSYISLLTL 497
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 158/348 (45%), Gaps = 43/348 (12%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++F+ M+ QR D YS LI K G + LFS+ + G + D V++S I
Sbjct: 306 FDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 163 AHLHSRDKTKA-------------------------------LAKALGYFEKM--KGMER 189
++ S D A + +A G + ++ +GME
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME- 423
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
P+IVTY+ ++ F + G + +L++D+ + PD+ Y ++D K+G++
Sbjct: 424 --PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS-MVLN 308
+M + +++ FN LID + + +FD+ +VF+ + KP + TF + M ++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV--SKAKELFDGLVESKVQ 366
+ RL ++A +F +M +MG P + + +LI FC + + +LFD + +K+
Sbjct: 542 IMEGRL-EEALFLFFRMFKMGLEPDALAYCTLI--DAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 367 IKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
++ N ++ + + ++A F K+ PD TY + Y
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 146/367 (39%), Gaps = 75/367 (20%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI K G R L+ +M G PD +Y L+ K + A+ +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG----LSKQGLMLHAMRFS 484
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM G + + N+V +N ++ + + + ++ +F+ + + PD+ T+ VM
Sbjct: 485 VKMLG-QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK-------QQFDKME---------- 284
G + E + RM +PD + + LID++ K Q FD M+
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 285 ------------------QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ F +L+ K +P + T+N+M+ Y R D+AE +F+ +
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 327 EMGYAPSFVTHESLIYM----------------------------YG-FCDCVSKAKE-- 355
+ P+ VT LI++ YG D SK+ +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 356 ----LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLY 411
LF+ + E + + + + ++D C EA ++F +A K+LPD Y +L
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 412 KAYTKAN 418
+ Y K
Sbjct: 784 RGYCKVG 790
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 127/282 (45%), Gaps = 21/282 (7%)
Query: 134 QTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CK 191
Q +A L S + + G P+ + +LI+ + +A F+ K ME+ +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA-------FDLFKVMEQRGIE 318
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+++ Y+ ++ + +AG + + LF V D+ ++ +D Y K G + +
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
RM P+++T+ +LI + + + ++ +L+ +PS+ T++S++ + K
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG------LVESKV 365
+++ M +MGY P V + L+ D +SK + ++ +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLV------DGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 366 QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
++ V N+++D +C N EA +F+ + PD +T+
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 6/252 (2%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L + KH K L++F MQ+ + AD V + +I ++ K + A F+ +
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
PD YN++I + R L +A FE +K + PN VT I++ +
Sbjct: 631 KMEPDIVTYNTMICGYCSLR----RLDEAERIFELLK-VTPFGPNTVTLTILIHVLCKNN 685
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
++ +F + E P+ TY +MD + K I + M+ P +++++
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
++ID K+ + D+ +F + +K P + + ++ Y K +A +++ M
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 329 GYAPSFVTHESL 340
G P + +L
Sbjct: 806 GVKPDDLLQRAL 817
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 7/250 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y LI K + + + LF M+ D +V N +I H K + A
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI----HLLFKCHRIEDA 620
Query: 178 LGYFEKM-KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
+F + +G + +P+IVTYN ++ + ++++ +F+ L + P+ T ++
Sbjct: 621 SKFFNNLIEG--KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
K + M + M KP+ +T+ L+D + K + ++F+ +
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
PS+ +++ ++ K D+A N+F Q + P V + LI Y + +A L
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 357 FDGLVESKVQ 366
++ ++ + V+
Sbjct: 799 YEHMLRNGVK 808
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG-VMDAYGKRGMIREMEAMLTRMKSN 258
+L + + +V+ + F L + P + +G V+DA +G + + +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+ +++ N ++ Q + ++ +L P++ TF +++ + K D+A
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
++FK M + G P + + +LI Y + +LF + V++ V ++ +DV
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
Y + A +++R + P+ TY +L K +
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 172/361 (47%), Gaps = 19/361 (5%)
Query: 60 LTRKISDKEPLERTLNKYVRLVRTEHC-------FLLFEELGKHDKWLPCLEVFRWMQKQ 112
+ R++S+ + +++ V L+R++ C + + GK+ L+VF+ M++
Sbjct: 49 ILRRLSETRMVNH-VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREI 107
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK 172
Y+ L++ + Q LF+ G P+ YN LI K K
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC----KKK 163
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
KA G+ + M E KP++ +Y+ ++ A+AGK++ LF ++ E V+PD+ Y
Sbjct: 164 EFEKARGFLDWM-WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCY 222
Query: 233 NGVMDAYGK-RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
N ++D + K + ME ++ + P++ T N++I K + D ++++ +
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC-- 349
+++ + L T++S++ A DKAE+VF ++ E + VT+ ++ + GFC C
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM--LGGFCRCGK 340
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+ ++ EL+ ++E K + + + N ++ N EA +++ + D +TY +
Sbjct: 341 IKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 410 L 410
Sbjct: 400 F 400
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 140/288 (48%), Gaps = 10/288 (3%)
Query: 108 WMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS 167
WM K+ + D YS +I+ + K G+ A+ LF EM G PD + YN LI L
Sbjct: 174 WMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 168 RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
+D A+ ++++ PN+ T+NI++ ++ G+V+ +++ + ++
Sbjct: 233 KDHKTAME----LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
D+YTY+ ++ G + + E++ + + D++T+N ++ + + + + +++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
+ ++ K ++ ++N ++ + D+A +++ M GYA T+ I+++G C
Sbjct: 349 R-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG--IFIHGLC 405
Query: 348 --DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
V+KA + + S + V +++D C +EA +L +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 125/301 (41%), Gaps = 9/301 (2%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y AD Y I + G A+ + E+ ++G D Y S+I K K L
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC----KKKRL 445
Query: 175 AKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+A ++M G+E N N ++ + ++ + + +++ ++ P + +Y
Sbjct: 446 EEASNLVKEMSKHGVEL---NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
N ++ K G E A + M N KPDL T+++L+ + ++ D +++ L+
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
S + + N ++ D A V M + VT+ +L+ + ++
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A ++ + + +Q + + N ++ C+ A F AR+ + P T+ +L +
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Query: 413 A 413
A
Sbjct: 683 A 683
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 135/338 (39%), Gaps = 13/338 (3%)
Query: 103 LEVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
LE++R M+ + + N V Y+ LI + + G+ A ++ M G D + Y I
Sbjct: 345 LELWRIMEHKN---SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
H + KALG ++++ ++ Y I+ + ++E+ ++L K++
Sbjct: 402 ----HGLCVNGYVNKALGVMQEVES-SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ V + + N ++ + + E L M N C+P ++++N+LI K +F
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ K +L + KP L T++ ++ + R D A ++ Q + G + H LI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 342 YMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIK 399
+G C + A + + + T N +++ + A ++ +
Sbjct: 577 --HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 400 VLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIP 437
+ PD +Y + K GI P
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
Y+ ++ + M+ + ++ ++S +CK D +I +YGK D+ VFK
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFK-- 102
Query: 291 LRSKE----KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
R +E +P++ ++N+++ + +A+ K E++F G AP+ T+ LI M
Sbjct: 103 -RMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
KA+ D + + + V + + +++ +A LF V PD +
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTC 221
Query: 407 YKLLYKAYTK 416
Y +L + K
Sbjct: 222 YNILIDGFLK 231
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 155/363 (42%), Gaps = 44/363 (12%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F E G+ D + LE+ K Y DN V S +IS K G+ LA+ F ++G
Sbjct: 144 FVEKGEMDNAIEVLEMMT--NKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSG 201
Query: 150 CR-PDTSVYNSLISA--HLHSRDKTKALAKAL-----------------GYFEKM----- 184
P+ Y +L+SA L D+ + L + L GYF+
Sbjct: 202 VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 185 ---------KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
KGM R ++V+Y+I++ ++ G VE+ L + + V P++ TY +
Sbjct: 262 LMQDREMVEKGMNR---DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ K G + E + R+ S + D + LID +K ++ + + +
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
+PS+ T+N+++ A +A+ V K G +T+ +L+ Y + E
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLE 433
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+ +E+K+ + + N +L + + EAD+L++ + + PD +TY + K Y
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYC 493
Query: 416 KAN 418
K
Sbjct: 494 KTG 496
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI + K+G A+ L +M G P+ Y ++I K L +A F
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC----KMGKLEEAFVLF 335
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
++ G+E + Y ++ + G + + S+ D+++ + P I TYN V++
Sbjct: 336 NRILSVGIE---VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G + E + + S D+IT++ L+DSY K Q D + ++ + L +K L
Sbjct: 393 CMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
N ++ + +A+ +++ M EM P T+ ++I Y + +A E+F+
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 360 LVESKVQIKVSTLNAMLDVYC 380
L +S V V N ++D C
Sbjct: 508 LRKSSVSAAV-CYNRIIDALC 527
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
ALG+FE PN+VTY ++ A Q GKV++V L + L++ D Y+ +
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
Y K G + + M D++++++LID K+ ++ + +++ +
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAK 354
P+L T+ +++ K ++A +F ++ +G + +LI G C +++A
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI--DGICRKGNLNRAF 367
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ + + +Q + T N +++ C+ EAD + S V+ D TY L +Y
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY 422
Query: 415 TKANS 419
K +
Sbjct: 423 IKVQN 427
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 10/275 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS I K G A+ EM G D Y+ LI K + +ALG
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG----LSKEGNVEEALGLL 300
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM E +PN++TY I+R + GK+E+ LF + + D + Y ++D +
Sbjct: 301 GKMIK-EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR 359
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+G + +ML M+ +P ++T+N +I+ + + ++V K ++ + T
Sbjct: 360 KGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVIT 414
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+++++ +Y K + D + ++ E V L+ + +A L+ +
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP 474
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
E + +T M+ YC +EA +F R
Sbjct: 475 EMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 170 KTKALAKALGY--FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
K L KAL F K +G+ N +TYN ++ Q G + + LF L+ + P
Sbjct: 667 KEGFLVKALNLCSFAKSRGV---TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
TY ++D K G+ + E +L M S P++I +N ++D Y K Q + +V
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
+ + P T +SM+ Y K ++A +VF + + + F L + GFC
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF--LFLIKGFC 841
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 5/166 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +I+ + K+G A+ L S ++ G +T YNSLI+ + L +AL F
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC----QQGCLVEALRLF 713
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ ++ + P+ VTY I++ + G L + + P+I YN ++D Y K
Sbjct: 714 DSLENIGLV-PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
G + +++R + PD T + +I Y KK ++ VF
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K R + Y+ LI+ + ++G A+ LF + N G P Y LI + K
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILID----NLCK 737
Query: 171 TKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
A + M KG+ PNI+ YN I+ + + G+ E + V+PD
Sbjct: 738 EGLFLDAEKLLDSMVSKGL---VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPD 794
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+T + ++ Y K+G + E ++ T K D F LI + K + ++ + +
Sbjct: 795 AFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLR 854
Query: 289 SLLRSK 294
+L S+
Sbjct: 855 EMLVSE 860
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
D +Y LI + +KG A + +M G +P YN++I+ + ++A
Sbjct: 345 VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA--- 401
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
E KG+ +++TY+ +L ++ + ++ V + + E+ + D+ N ++
Sbjct: 402 ----DEVSKGV---VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
A+ G E +A+ M PD T+ +I Y K Q ++ ++F L +S
Sbjct: 455 KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++ +N ++ K + D A V ++ E G T +L++
Sbjct: 515 AAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLH 559
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%)
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
+ ++ S D+ Y +++ K G + + + + KS + IT+N LI+ ++
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+ ++F SL PS T+ ++ N K L AE + M G P+ + + S+
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
+ Y A + + +V T+++M+ YC +EA S+F + +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 401 LPDASTYKLLYKAY 414
D + L K +
Sbjct: 827 SADFFGFLFLIKGF 840
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEM-RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
++ I + + A+ F M R +P+ VYN++++ ++ S D + KAL
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGD----MDKALR 214
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
++++M G ER KP++ T+NI++ + ++ K + LF+++ E P++ ++N ++ +
Sbjct: 215 FYQRM-GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF 273
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G I E M M C+ T +L+D ++ + D + LL + PS
Sbjct: 274 LSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+ S+V +A + +++ + G P F+ +L+ KA +
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEK 393
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
++ + + T N +L C ++ +A+ L A S PD +TY +L +TK
Sbjct: 394 MMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 8/240 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L ++ M K+R D ++ LI+ + + LA+ LF EM+ GC P+ +N+LI
Sbjct: 213 LRFYQRMGKER-AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
L S + + A E C+ + T I++ + G+V+ L DL
Sbjct: 272 GFLSSGKIEEGVKMAYEMIEL-----GCRFSEATCEILVDGLCREGRVDDACGLVLDLLN 326
Query: 223 SIVSPDIYTYNGVMDAY-GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
V P + Y +++ G+ +R ME M K Q P I L++ K + +
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQ-TPCFIACTTLVEGLRKSGRTE 385
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
K + ++ + P TFN ++ + + A + + GY P T+ L+
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y L+ + + + AM + E+ G P +L+ L +T+ KA G+
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG-LRKSGRTE---KASGFM 391
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
EKM P+ VT+N++LR + N L PD TY+ ++ + K
Sbjct: 392 EKMMNAG-ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
G +E E ++ M PD+ T+N L+D +F +
Sbjct: 451 EGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 47/336 (13%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
SK++ + K G+ A+ F EM + G + DT NSL+ A + K ++ A F
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALV----KENSIEHAHEVF 262
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+K + KP+ T+NI++ F +A K + ++ + + +PD+ TY ++AY K
Sbjct: 263 --LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK 320
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G R + ML M+ N C P+++T+ +++ S GK +Q + V++ + P
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 302 FNSMVLNYGK-ARLKDKAENVFKQMTEMGY------------------------------ 330
++S++ K R KD AE +F+ MT G
Sbjct: 381 YSSLIHILSKTGRFKDAAE-IFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Query: 331 --------APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
+P+ T+ L+ M + L +V++ V I VST ++ C++
Sbjct: 440 EDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMS 499
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+EA F+ A ++P ST K+L K N
Sbjct: 500 GKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 535
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 132/296 (44%), Gaps = 3/296 (1%)
Query: 99 WLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
W F W Q Y+ Y+ ++ V+GK L L +EM V
Sbjct: 146 WNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKN--EESKLVTL 203
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
+S + K+ KA+ F +M+ K + + N ++ A + +E + +F
Sbjct: 204 DTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFL 263
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
L ++I PD T+N ++ + K + AM+ MK + PD++T+ +++Y K+
Sbjct: 264 KLFDTI-KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
F ++ ++ + + + P++ T+ ++ + GK++ +A V+++M E G P +
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
SLI++ A E+F+ + V+ V N M+ ++ + A L +R
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR 438
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 5/290 (1%)
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G PD+S +N+ +S L D + G+ + KP Y ++++A A
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR-----GVKPGFNGYLVLVQALLNAQ 404
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ + + K + + +Y+YN V+D K I LT M+ P+L+TFN
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+ Y + K+ V + LL KP + TF+ ++ +A+ A + FK+M E
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW 524
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
G P+ +T+ LI ++ +LF + E+ + + NA + +C ++A
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ L + I + PD TY L KA +++ G +P+
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 153/324 (47%), Gaps = 14/324 (4%)
Query: 96 HDKWLPCL-------EVFRWMQK--QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMR 146
+D L CL E ++++K +R Y+ D+ ++ +S + K +F
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 147 NTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
+ G +P + Y L+ A L++ + ++ Y ++M G++ ++ +YN ++ +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNA----QRFSEGDRYLKQM-GVDGLLSSVYSYNAVIDCLCK 437
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
A ++E ++ + +SP++ T+N + Y RG ++++ +L ++ + KPD+IT
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
F+L+I+ + ++ FK +L +P+ T+N ++ + D++ +F +M
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
E G +P + + I + V KA+EL ++ ++ T + ++ +
Sbjct: 558 ENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRES 617
Query: 387 EADSLFQRARSIKVLPDASTYKLL 410
EA +F +PD+ T +L+
Sbjct: 618 EAREMFSSIERHGCVPDSYTKRLV 641
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 129/318 (40%), Gaps = 45/318 (14%)
Query: 93 LGKHDKWLPCLEVFRWMQK-QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCR 151
L D L L + W+ Y D + S L + + +KG L+M L E+R++G R
Sbjct: 83 LQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYR 142
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
IS L +++ ++ + G +
Sbjct: 143 ---------ISDELMC-------------------------------VLIGSWGRLGLAK 162
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
N +F + + P YN V+DA K + +M+S+ CKPD T+N+LI
Sbjct: 163 YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILI 222
Query: 272 DSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
KK D+ ++ K + + +P++ T+ ++ + A D+A + M
Sbjct: 223 HGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN 282
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI--NNLPQEAD 389
P+ T + ++ C KA E+ G +E ++ +A+L YC+ N++ +E
Sbjct: 283 PNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETG 340
Query: 390 SLFQRARSIKVLPDASTY 407
++ +PD+ST+
Sbjct: 341 QFLRKIGERGYIPDSSTF 358
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 134/360 (37%), Gaps = 52/360 (14%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ +I + K LA F +MR+ GC+PD YN LI H K + +A+
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILI----HGVCKKGVVDEAIRL 237
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ-----------------------VNSLF 217
++M+ E +PN+ TY I++ F AG+V++ V+ +F
Sbjct: 238 VKQME-QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 218 KDLD------------ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+ L E + Y+ V+ M +E L ++ PD
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
TFN + K + ++F + KP + +V A+ + + KQM
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG------LVESKVQIKVSTLNAMLDVY 379
G S ++ ++I DC+ KA+ + + + + + + T N L Y
Sbjct: 417 GVDGLLSSVYSYNAVI------DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ ++ + ++ PD T+ L+ +A GI PN+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 127/330 (38%), Gaps = 38/330 (11%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LI + KKG A+ L +M G RP+ Y LI L + +AL +
Sbjct: 214 DRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ- 272
Query: 178 LGYFEKMK----------------GMERCKP----------------NI--VTYNIILRA 203
E M+ G+ RC P N+ V Y+ +L
Sbjct: 273 ---LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+ ++ + + E PD T+N M K + E + S KP
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
+ +L+ + Q+F + ++ K + S+ ++N+++ KAR + A
Sbjct: 390 FNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 324 QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M + G +P+ VT + + Y V K + + L+ + V T + +++ C
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++A F+ + P+ TY +L ++
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 12/331 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQ-KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
L L KH K LE+ W Q + ++ D + L+ + + G+ A + E+
Sbjct: 476 LISGLCKHGKHSKALEL--WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFA 205
GC D YN+LIS K L +A + ++M +G+ KP+ TY+I++
Sbjct: 534 RGCVMDRVSYNTLISGCCGK----KKLDEAFMFLDEMVKRGL---KPDNYTYSILICGLF 586
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
KVE+ + D + + PD+YTY+ ++D K E + M S +P+ +
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
+N LI +Y + + ++ + + P+ T+ S++ ++A+ +F++M
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
G P+ + +LI YG + K + L + V T M+ Y +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
EA L R ++PD+ TYK Y K
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+ T NI+L + +A + ++ F D+ VSPD+Y + ++A+ K G + E +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
++M+ P+++TFN +ID G ++D+ + ++ +P+L T++ +V +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
A+ A V K+MT+ G+ P+ + + +LI + ++KA E+ D +V + + ST
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSI 398
N ++ YC N A+ L + SI
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSI 429
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 5/320 (1%)
Query: 119 NGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
G+ + LIS + K G+ A+ L+ + N G DT N+L LH + L +A
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL----LHGLCEAGKLDEAF 525
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+++ G C + V+YN ++ K+++ ++ + + PD YTY+ ++
Sbjct: 526 RIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ E K N PD+ T++++ID K ++ ++ ++ F ++ +P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+N ++ Y ++ A + + M G +P+ T+ SLI V +AK LF+
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ ++ V A++D Y + + L + S V P+ TY ++ Y +
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 419 SXXXXXXXXXXXXXXGIIPN 438
+ GI+P+
Sbjct: 765 NVTEASRLLNEMREKGIVPD 784
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALG 179
VY+ LI + G+ +A+ L +M++ G P+++ Y SLI + SR + L
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL----- 701
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
FE+M+ ME +PN+ Y ++ + + G++ +V L +++ V P+ TY ++ Y
Sbjct: 702 LFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
+ G + E +L M+ PD IT+ I Y K+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 124/325 (38%), Gaps = 5/325 (1%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
+ + G ++ +I ++ A+ EM P + +LIS +KAL
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ K ++ T N +L +AGK+++ + K++ D +YN
Sbjct: 491 ELWFQFLNKGFVVD-----TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ + + E L M KPD T+++LI + ++ Q + R+
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P + T++ M+ KA ++ + F +M P+ V + LI Y +S A
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
EL + + + +T +++ I + +EA LF+ R + P+ Y L Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 415 TKANSXXXXXXXXXXXXXXGIIPNK 439
K + PNK
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNK 750
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
R K + ++ Y+ LI M + A LF EMR G P+ Y +LI +
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY- 725
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
K + K +M + PN +TY +++ +A+ G V + + L ++ E +
Sbjct: 726 ---GKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 226 SPDIYTYNGVMDAYGKRGMIRE 247
PD TY + Y K+G + E
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLE 803
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 12/331 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQ-KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
L L KH K LE+ W Q + ++ D + L+ + + G+ A + E+
Sbjct: 476 LISGLCKHGKHSKALEL--WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFA 205
GC D YN+LIS K L +A + ++M +G+ KP+ TY+I++
Sbjct: 534 RGCVMDRVSYNTLISGCCGK----KKLDEAFMFLDEMVKRGL---KPDNYTYSILICGLF 586
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
KVE+ + D + + PD+YTY+ ++D K E + M S +P+ +
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
+N LI +Y + + ++ + + P+ T+ S++ ++A+ +F++M
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
G P+ + +LI YG + K + L + V T M+ Y +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
EA L R ++PD+ TYK Y K
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+ T NI+L + +A + ++ F D+ VSPD+Y + ++A+ K G + E +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
++M+ P+++TFN +ID G ++D+ + ++ +P+L T++ +V +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
A+ A V K+MT+ G+ P+ + + +LI + ++KA E+ D +V + + ST
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSI 398
N ++ YC N A+ L + SI
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSI 429
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 5/320 (1%)
Query: 119 NGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
G+ + LIS + K G+ A+ L+ + N G DT N+L LH + L +A
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL----LHGLCEAGKLDEAF 525
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+++ G C + V+YN ++ K+++ ++ + + PD YTY+ ++
Sbjct: 526 RIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ E K N PD+ T++++ID K ++ ++ ++ F ++ +P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+N ++ Y ++ A + + M G +P+ T+ SLI V +AK LF+
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ ++ V A++D Y + + L + S V P+ TY ++ Y +
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 419 SXXXXXXXXXXXXXXGIIPN 438
+ GI+P+
Sbjct: 765 NVTEASRLLNEMREKGIVPD 784
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKALG 179
VY+ LI + G+ +A+ L +M++ G P+++ Y SLI + SR + L
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL----- 701
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
FE+M+ ME +PN+ Y ++ + + G++ +V L +++ V P+ TY ++ Y
Sbjct: 702 LFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
+ G + E +L M+ PD IT+ I Y K+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 124/325 (38%), Gaps = 5/325 (1%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
+ + G ++ +I ++ A+ EM P + +LIS +KAL
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ K ++ T N +L +AGK+++ + K++ D +YN
Sbjct: 491 ELWFQFLNKGFVVD-----TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ + + E L M KPD T+++LI + ++ Q + R+
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P + T++ M+ KA ++ + F +M P+ V + LI Y +S A
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
EL + + + +T +++ I + +EA LF+ R + P+ Y L Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 415 TKANSXXXXXXXXXXXXXXGIIPNK 439
K + PNK
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNK 750
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
R K + ++ Y+ LI M + A LF EMR G P+ Y +LI +
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY- 725
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
K + K +M + PN +TY +++ +A+ G V + + L ++ E +
Sbjct: 726 ---GKLGQMVKVECLLREMHS-KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 226 SPDIYTYNGVMDAYGKRGMIRE 247
PD TY + Y K+G + E
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLE 803
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 10/288 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
LE+ M R+ ++ V S L+ + K+G+ A+ L + + G P+ VYN+LI
Sbjct: 317 LEMMDEMLCLRFSPSEAAV-SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
S K + +A F++M G +PN VTY+I++ F + GK++ S ++ +
Sbjct: 376 ----SLCKGRKFHEAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ + +Y YN +++ + K G I E + M + + +P ++T+ L+ Y K + +K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+++ + PS+ TF +++ +A L A +F +M E P+ VT+ +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI- 549
Query: 343 MYGFCD--CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
G+C+ +SKA E + E + + ++ C+ EA
Sbjct: 550 -EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 154/354 (43%), Gaps = 11/354 (3%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
LL + + + L + VF+ M + + + S L+ + K LAM LF++M +
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
G RPD +Y +I + +D ++A + + + E C NIV YN+++ +
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRA-KEMIAHMEATG----CDVNIVPYNVLIDGLCKK 275
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC---KPDL 264
KV + + KDL + PD+ TY ++ K ++E E L M C P
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK---VQEFEIGLEMMDEMLCLRFSPSE 332
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+ L++ K+ + ++ + K ++ P+L +N+++ + K R +AE +F +
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M ++G P+ VT+ LI M+ + A +V++ +++ V N++++ +C
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
A+ + K+ P TY L Y GI P+
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 140/334 (41%), Gaps = 12/334 (3%)
Query: 110 QKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
+ W + N V Y+ +I ++G A EM G PDT Y LI H
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI----HGL 587
Query: 169 DKTKALAKALGYFEKM-KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
T ++A + + + KG C+ N + Y +L F + GK+E+ S+ +++ + V
Sbjct: 588 CLTGQASEAKVFVDGLHKG--NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
D+ Y ++D K + +L M KPD + + +ID+ K F + ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL--IYMYG 345
++ P+ T+ +++ KA ++AE + +M + P+ VT+ I G
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 346 FCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAS 405
D + KA EL + +++ + +T N ++ +C +EA L R V PD
Sbjct: 766 EVD-MQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 406 TYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
TY + + N GI P++
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 137/324 (42%), Gaps = 40/324 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + KK + A+ + ++ +PD Y +L+ + K + L
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV----YGLCKVQEFEIGLEMM 320
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M + R P+ + ++ + GK+E+ +L K + + VSP+++ YN ++D+ K
Sbjct: 321 DEMLCL-RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD-------------------- 281
E E + RM +P+ +T+++LID + ++ + D
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 282 ---------------KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
E ++ K +P++ T+ S++ Y +KA ++ +MT
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
G APS T +L+ + A +LF+ + E V+ T N M++ YC
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 387 EADSLFQRARSIKVLPDASTYKLL 410
+A + ++PD +Y+ L
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPL 583
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y LI K +L L EM + G +PD +Y S+I A + KT
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA----KSKT 695
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+A G ++ M E C PN VTY ++ +AG V + L + P+ T
Sbjct: 696 GDFKEAFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 232 YNGVMDAY--GKRGMIREME---AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
Y +D G+ M + +E A+L + +N T+N+LI + ++ + ++ ++
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILKGLLANTA-----TYNMLIRGFCRQGRIEEASEL 809
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
++ P T+ +M+ + KA ++ MTE G P V + +LI+
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 347 CDCVSKAKEL 356
+ KA EL
Sbjct: 870 AGEMGKATEL 879
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 87/216 (40%), Gaps = 30/216 (13%)
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DK 170
R D+ +Y+ +I K G + A ++ M N GC P+ Y ++I+ + ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 171 TKALAKAL---------------------GYFEKMKGMERCKP-------NIVTYNIILR 202
+ L + G + K +E N TYN+++R
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 203 AFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP 262
F + G++E+ + L + VSPD TY +++ +R +++ + M +P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
D + +N LI + K ++ +LR P+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A LF +RN G P + +L+ HL KTK + F + + +P+ Y
Sbjct: 128 AADLFFALRNEGIYPSSDSL-TLLLDHLV---KTKQFRVTINVFLNILESD-FRPSKFMY 182
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++A + V + LF + + P ++ YN ++D K + + E + M +
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+ P LIT+N LID Y K +K +V + + +PSL TFN+++ KA + +
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
AENV K+M ++G+ P T L Y + A +++ V+S V++ T + +L+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
C ++A+ + R + ++P+ Y + Y +
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 61/338 (18%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV------YSKLISVMGKKGQTRLAMWL 141
+L G+ ++ C ++ + M+ DNG Y LI+ + K + A +
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEME-------DNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 142 FSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNI 199
+M + G P +YN LI S+ K + A + ++M KG+E N+VTYN
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCC-SKGK---IEDAFRFSKEMLKKGIEL---NLVTYNT 569
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
++ + GK+ + L ++ + PD++TYN ++ YG G ++ A+ MK +
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAE 319
KP L T++LLI S K+ + E++F + KP L +N ++ Y +KA
Sbjct: 630 IKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
N+ KQM E T+ SLI Q+KV L
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILG----------------------QLKVGKL------- 716
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
C E SL + ++ P+A TY ++ K + +
Sbjct: 717 C------EVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
S L++ + K+G+ A + G P+ +YN++I + D +G
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD-------LVGARM 410
Query: 183 KMKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
K++ ME+ KP+ + YN ++R F + G++E + VSP + TYN ++ YG
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
++ + +L M+ N P+++++ LI+ K + + + V + + P +
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 301 TFNSMVLNYGKARLKDKAENVF---KQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+N ++ K K E+ F K+M + G + VT+ +LI +S+A++L
Sbjct: 531 IYNMLI---DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ ++ V T N+++ Y Q +L++ + + P TY LL TK
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK 646
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 88/354 (24%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
LE+F M+ R Y +Y+ LI + K + A LF EM P YN+LI
Sbjct: 199 LELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ + + K+ E+MK + +P+++T+N +L+ +AG VE ++ K++ +
Sbjct: 258 GYCKAGNPEKSFKVR----ERMKA-DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 223 SIVSPDIYTYNGVMDAYG-----------------------------------KRGMIRE 247
PD +T++ + D Y K G I +
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSY-------GKKQQFDKMEQ--------VFKSLLR 292
E +L R + P+ + +N +ID Y G + + + ME+ + L+R
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 293 ---------SKEK-----------PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+ EK PS+ T+N ++ YG+ DK ++ K+M + G P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLV------ESKVQIKVSTLNAMLDVYC 380
+ V++ +LI +C+ K +L + + + V KV N ++D C
Sbjct: 493 NVVSYGTLI------NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 148/363 (40%), Gaps = 54/363 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L+ + K G A + EM++ G PD ++ L + S +K +A ALG +
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY-SSNEKAEA---ALGVY 342
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF-KDLDESIVSPDIYTYNGVMDAYG 240
E K N T +I+L A + GK+E+ + +++ + +V P+ YN ++D Y
Sbjct: 343 ETAVD-SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYC 400
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
++G + + M+ KPD + +N LI + + + + E+ + PS+
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF--- 357
T+N ++ YG+ DK ++ K+M + G P+ V++ +LI +C+ K +L
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI------NCLCKGSKLLEAQ 514
Query: 358 ----------------------DG----------------LVESKVQIKVSTLNAMLDVY 379
DG +++ +++ + T N ++D
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ EA+ L + PD TY L Y A + GI P
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 440 RFF 442
+ +
Sbjct: 635 KTY 637
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 145/331 (43%), Gaps = 12/331 (3%)
Query: 86 CFLLFEELGKHDKWLPCLEVF-RWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
C +L L K K E+ R M K + + +Y+ +I +KG A
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAK--GLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M G +PD YN LI + A + KMK ++ P++ TYNI++ +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV----NKMK-LKGVSPSVETYNILIGGY 469
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+ + ++ + K+++++ P++ +Y +++ K + E + + M+ P +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+N+LID K + + + K +L+ + +L T+N+++ +AE++ +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
++ G P T+ SLI YGF V + L++ + S ++ + T + ++ + C
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEG 648
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+ + LF + + PD Y + Y
Sbjct: 649 IELTERLFGE---MSLKPDLLVYNGVLHCYA 676
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 11/299 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y K I K + LF+ M++ P +YN LI K K + A
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC----KGKRMNDAEQL 236
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F++M R P+++TYN ++ + +AG E+ + + + + P + T+N ++
Sbjct: 237 FDEMLA-RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K GM+ + E +L MK PD TF++L D Y ++ + V+++ + S K +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC---DCVSKAKELF 357
T + ++ K +KAE + + G P+ V + ++I G+C D V A+
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI--DGYCRKGDLVG-ARMKI 412
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + + ++ N ++ +C + A+ + + V P TY +L Y +
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+++K +++A F ++ E P+ + ++L + + ++F ++ ES P
Sbjct: 120 NESKMISEAADLFFALRN-EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+ Y + A K + + + RMK ++ P + +N+LID K ++ + EQ+F
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
+L + PSL T+N+++ Y KA +K+ V ++M PS +T +L+
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL------- 291
Query: 349 CVSKAKELFD-GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
K LF G+VE +A+++ + + + +PDA T+
Sbjct: 292 -----KGLFKAGMVE------------------------DAENVLKEMKDLGFVPDAFTF 322
Query: 408 KLLYKAYT 415
+L+ Y+
Sbjct: 323 SILFDGYS 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + G+ A L E+ G +PD YNSLIS + + + + +A +
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA----LY 622
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E+MK KP + TY++++ + G +E LF ++ + PD+ YNGV+ Y
Sbjct: 623 EEMK-RSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LKPDLLVYNGVLHCYAV 677
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + + +M D T+N LI K + ++ + + + +P T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+N +V + + + A +++M E G+
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
MI E + +++ P + LL+D K +QF VF ++L S +PS +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLV 361
+ K K +F +M PS + LI G C ++ A++LFD ++
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEML 241
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXX 421
++ + T N ++D YC P+++ + +R ++ + P T+ L K KA
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 422 XXXXXXXXXXXXGIIPNKRFF 442
G +P+ F
Sbjct: 302 DAENVLKEMKDLGFVPDAFTF 322
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--SAHLHS 167
M D G+ Y+ L+ + G + + L +M + G NS+I S L
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCSVMLSG 372
Query: 168 RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
KT + +AL F +MK + P++V Y+I++ + GK + L+ ++ + + P
Sbjct: 373 LCKTGRIDEALSLFNQMKA-DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
+ T+ ++ ++GM+ E ++L + S+ D++ +N++ID Y K ++ ++F
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
K ++ + PS+ TFNS++ Y K + +A + + G APS V++ +L+ Y C
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 348 DCVSKAKEL 356
EL
Sbjct: 552 GNTKSIDEL 560
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 14/324 (4%)
Query: 121 VYSK--LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKA 177
VYS LI+ + G A+ L S+M G PD+ YN L HL L
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL--------LGMI 308
Query: 178 LGYFEKMKGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD-LDESIVSPDIYTYNG 234
G +E ++ M + P+++TY I+L Q G ++ L KD L I +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ K G I E ++ +MK++ PDL+ ++++I K +FD ++ + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P+ T +++L + + +A ++ + G V + +I Y C+ +A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
ELF ++E+ + V+T N+++ YC EA + + + P +Y L AY
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
+ GI P
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPT 572
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 32/348 (9%)
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
C ++ L K + L +F M K D YS +I + K G+ +A+WL+ EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
+ P++ + +L L + L +A + + +IV YNI++ +A
Sbjct: 425 CDKRILPNSRTHGAL----LLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYA 479
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++G +E+ LFK + E+ ++P + T+N ++ Y K I E +L +K P ++
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 266 TFNLLIDSY---GKKQQFDKMEQ----------------VFKSLLRSKEKPSLPTFNSMV 306
++ L+D+Y G + D++ + +FK L R + + N ++
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC---NHVL 596
Query: 307 LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ 366
+ R+ +K + + M G P +T+ ++I +S A + + +
Sbjct: 597 ----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 367 IKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+T N ++D C+ ++ADS + V Y L KA+
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 14/322 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ ++S K G +A F + G P +N LI+ ++A+AL
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC----LVGSIAEALELA 280
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
M G+E P+ VTYNI+ + F G + + +D+ + +SPD+ TY ++
Sbjct: 281 SDMNKHGVE---PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 240 GKRGMIREMEAMLTRMKSNQCKPD-LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ G I +L M S + + +I ++++ K + D+ +F + P
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD--CVSKAKEL 356
L ++ ++ K D A ++ +M + P+ TH +L + G C + +A+ L
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL--LLGLCQKGMLLEARSL 455
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
D L+ S + + N ++D Y + +EA LF+ + P +T+ L Y K
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 417 ANSXXXXXXXXXXXXXXGIIPN 438
+ G+ P+
Sbjct: 516 TQNIAEARKILDVIKLYGLAPS 537
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 40/289 (13%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P++V++N I+ + + G V+ S F + + + P +Y++N +++ G I E +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV----- 306
+ M + +PD +T+N+L + +V + +L P + T+ ++
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 307 ---LNYGKARLK----------------------------DKAENVFKQMTEMGYAPSFV 335
++ G LK D+A ++F QM G +P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 336 THESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
+ I ++G C A L+D + + ++ T A+L C + EA SL
Sbjct: 400 AYS--IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 394 RARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
S D Y ++ Y K+ GI P+ F
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/306 (17%), Positives = 114/306 (37%), Gaps = 17/306 (5%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
++++ +M++ T YNS++ H DK + K + N TY
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVL-YHFRETDKMWDVYKEIK-----------DKNEHTY 190
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+ ++ + K+E + + + P + ++N +M Y K G + ++ +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
P + + N+LI+ + ++ + + +P T+N + + +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIK-VSTLNA 374
A V + M + G +P +T+ I + G C + L ++ ++ + +
Sbjct: 311 AWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG 434
ML C EA SLF + ++ + PD Y ++ K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 435 IIPNKR 440
I+PN R
Sbjct: 429 ILPNSR 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 137 LAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
L++W F E+R+ +S L+S L + + K L L + +G R + +
Sbjct: 66 LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGL 125
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
++++L ++ V+ + K + + ++ +YN V+ + RE + M
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVY 179
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
K + K + T++ ++D ++Q+ + ++ PS+ +FNS++ Y K
Sbjct: 180 KEIKDKNEH-TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
D A++ F + + G PS +H LI +++A EL + + V+ T N +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + + A + + + PD TY +L
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 14/249 (5%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--SAHLHS 167
M D G+ Y+ L+ + G + + L +M + G NS+I S L
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCSVMLSG 372
Query: 168 RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
KT + +AL F +MK + P++V Y+I++ + GK + L+ ++ + + P
Sbjct: 373 LCKTGRIDEALSLFNQMKA-DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
+ T+ ++ ++GM+ E ++L + S+ D++ +N++ID Y K ++ ++F
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
K ++ + PS+ TFNS++ Y K + +A + + G APS V++ +L+ Y C
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 348 DCVSKAKEL 356
EL
Sbjct: 552 GNTKSIDEL 560
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 14/324 (4%)
Query: 121 VYSK--LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-HLHSRDKTKALAKA 177
VYS LI+ + G A+ L S+M G PD+ YN L HL L
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL--------LGMI 308
Query: 178 LGYFEKMKGM--ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD-LDESIVSPDIYTYNG 234
G +E ++ M + P+++TY I+L Q G ++ L KD L I +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ K G I E ++ +MK++ PDL+ ++++I K +FD ++ + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P+ T +++L + + +A ++ + G V + +I Y C+ +A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
ELF ++E+ + V+T N+++ YC EA + + + P +Y L AY
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 415 TKANSXXXXXXXXXXXXXXGIIPN 438
+ GI P
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPT 572
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 32/348 (9%)
Query: 86 CFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
C ++ L K + L +F M K D YS +I + K G+ +A+WL+ EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 146 RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
+ P++ + +L L + L +A + + +IV YNI++ +A
Sbjct: 425 CDKRILPNSRTHGAL----LLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYA 479
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++G +E+ LFK + E+ ++P + T+N ++ Y K I E +L +K P ++
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 266 TFNLLIDSY---GKKQQFDKMEQ----------------VFKSLLRSKEKPSLPTFNSMV 306
++ L+D+Y G + D++ + +FK L R + + N ++
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC---NHVL 596
Query: 307 LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ 366
+ R+ +K + + M G P +T+ ++I +S A + + +
Sbjct: 597 ----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 367 IKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+T N ++D C+ ++ADS + V Y L KA+
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 14/322 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ ++S K G +A F + G P +N LI+ ++A+AL
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC----LVGSIAEALELA 280
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
M G+E P+ VTYNI+ + F G + + +D+ + +SPD+ TY ++
Sbjct: 281 SDMNKHGVE---PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 240 GKRGMIREMEAMLTRMKSNQCKPD-LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ G I +L M S + + +I ++++ K + D+ +F + P
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD--CVSKAKEL 356
L ++ ++ K D A ++ +M + P+ TH +L + G C + +A+ L
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL--LLGLCQKGMLLEARSL 455
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
D L+ S + + N ++D Y + +EA LF+ + P +T+ L Y K
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 417 ANSXXXXXXXXXXXXXXGIIPN 438
+ G+ P+
Sbjct: 516 TQNIAEARKILDVIKLYGLAPS 537
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 40/289 (13%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P++V++N I+ + + G V+ S F + + + P +Y++N +++ G I E +
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV----- 306
+ M + +PD +T+N+L + +V + +L P + T+ ++
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 307 ---LNYGKARLK----------------------------DKAENVFKQMTEMGYAPSFV 335
++ G LK D+A ++F QM G +P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 336 THESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
+ I ++G C A L+D + + ++ T A+L C + EA SL
Sbjct: 400 AYS--IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 394 RARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
S D Y ++ Y K+ GI P+ F
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/306 (17%), Positives = 114/306 (37%), Gaps = 17/306 (5%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
++++ +M++ T YNS++ H DK + K + N TY
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVL-YHFRETDKMWDVYKEIK-----------DKNEHTY 190
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+ ++ + K+E + + + P + ++N +M Y K G + ++ +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
P + + N+LI+ + ++ + + +P T+N + + +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIK-VSTLNA 374
A V + M + G +P +T+ I + G C + L ++ ++ + +
Sbjct: 311 AWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG 434
ML C EA SLF + ++ + PD Y ++ K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 435 IIPNKR 440
I+PN R
Sbjct: 429 ILPNSR 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 137 LAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER-CKPNIV 195
L++W F E+R+ +S L+S L + + K L L + +G R + +
Sbjct: 66 LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGL 125
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
++++L ++ V+ + K + + ++ +YN V+ + RE + M
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVY 179
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
K + K + T++ ++D ++Q+ + ++ PS+ +FNS++ Y K
Sbjct: 180 KEIKDKNEH-TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
D A++ F + + G PS +H LI +++A EL + + V+ T N +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + + A + + + PD TY +L
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
+++ + D+ Y+ LI+ + G + A L EM G +P Y SLI L ++K
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV-LCRKNK 447
Query: 171 TKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
T+ +A FEK+ KGM KP++V N ++ G +++ SL K++D ++PD
Sbjct: 448 TR---EADELFEKVVGKGM---KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
TYN +M G E ++ MK KPD I++N LI Y KK V
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+L P+L T+N+++ K + + AE + ++M G P+ + S+I
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 16/336 (4%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K + + D Y+ ++S M +G+ A + EM+ G PD+ YN LI ++ D
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD- 342
Query: 171 TKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
L A Y ++M +GM P TYN ++ K+E L +++ E + D
Sbjct: 343 ---LEMAFAYRDEMVKQGM---VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
TYN +++ Y + G ++ A+ M ++ +P T+ LI +K + + +++F+
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC- 347
++ KP L N+++ + D+A ++ K+M M P VT+ L M G C
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL--MRGLCG 514
Query: 348 -DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
+A+EL + ++ + N ++ Y + A + S+ P T
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 407 YKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
Y L K +K GI+PN F
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 127/299 (42%), Gaps = 16/299 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL--AKALG 179
Y+ L+ +G+ A + SEM++ G +PD YN ++S + ++ L K +G
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIG 322
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
P+ V+YNI++R + G +E + ++ + + P YTYN ++
Sbjct: 323 LV----------PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
I E ++ ++ D +T+N+LI+ Y + K + ++ +P+
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELF 357
T+ S++ + +A+ +F+++ G P V +L M G C + +A L
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL--MDGHCAIGNMDRAFSLL 490
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ + T N ++ C +EA L + + PD +Y L Y+K
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 14/330 (4%)
Query: 85 HCFLLFEELGK-HDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFS 143
H L L + + W+ +++R K Y ++ +I+V+ K+G+ + A
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVY-----TFNIMINVLCKEGKLKKAKGFLG 249
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
M G +P YN+L+ R + + A+ + K KG + P++ TYN IL
Sbjct: 250 IMEVFGIKPTIVTYNTLVQG-FSLRGRIEG-ARLIISEMKSKGFQ---PDMQTYNPILSW 304
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
G+ +V +++ E + PD +YN ++ G + A M P
Sbjct: 305 MCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
T+N LI + + + E + + + T+N ++ Y + KA +
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 324 QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M G P+ T+ SLIY+ + +A ELF+ +V ++ + +N ++D +C
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKA 413
A SL + + + PD TY L +
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 6/316 (1%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
EV R M K+ + D+ Y+ LI G +A EM G P YN+LI
Sbjct: 313 EVLREM-KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
L +K +A A+ L + KG+ + VTYNI++ + Q G ++ +L ++
Sbjct: 372 -LFMENKIEA-AEILIREIREKGIVL---DSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ P +TY ++ ++ RE + + ++ KPDL+ N L+D + D+
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+ K + P T+N ++ ++A + +M G P +++ +LI
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
Y A + D ++ + T NA+L N + A+ L + +S ++P+
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 404 ASTYKLLYKAYTKANS 419
S++ + +A + ++
Sbjct: 607 DSSFCSVIEAMSNLDA 622
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 8/281 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ F M+ G P T N +++ L SR + A ++ M ME K N+ T+
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILT--LLSR--LNRIENAWVFYADMYRME-IKSNVYTF 228
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
NI++ + GK+++ ++ + P I TYN ++ + RG I +++ MKS
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+PD+ T+N ++ + + +V + + P ++N ++ +
Sbjct: 289 KGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
A +M + G P+F T+ +LI+ + + A+ L + E + + T N +++
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
YC + ++A +L + + P TY L + N
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 138/314 (43%), Gaps = 47/314 (14%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F +G D+ ++ + MQK R + + +I K G R ++ +F MR G
Sbjct: 564 FCGMGNMDR---AIQTVKEMQKLR-HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 150 CRPDTSVYNSLISAHLHSRDKTKAL-------------------------------AKAL 178
C P +N LI+ + R KA+ KA
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 679
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
YF +++ E +I TY +L+A ++G+++ ++ K++ + + + YN ++D
Sbjct: 680 EYFTRLQN-EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ +RG + E ++ +MK KPD+ T+ I + K ++ Q + + KP+
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP----------SFVTHESLIYMYGFCD 348
+ T+ +++ + +A L +KA + +++M MG P S ++ S+ Y +
Sbjct: 799 IKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSG 858
Query: 349 CVSKAKELFD-GLV 361
++ KE+ + GL+
Sbjct: 859 VMTICKEMVEAGLI 872
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 9/320 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
Y LI++ K G+ A+ + M+ G + + Y+ +I+ + K K A A
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV----KLKDWANAFAV 541
Query: 181 FEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
FE M +GM KP+++ YN I+ AF G +++ K++ + P T+ ++
Sbjct: 542 FEDMVKEGM---KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y K G +R + M+ C P + TFN LI+ +K+Q +K ++ + + +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
T+ ++ Y KA F ++ G T+E+L+ + A +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ + N ++D + EA L Q+ + V PD TY A +KA
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 419 SXXXXXXXXXXXXXXGIIPN 438
G+ PN
Sbjct: 779 DMNRATQTIEEMEALGVKPN 798
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 137/346 (39%), Gaps = 10/346 (2%)
Query: 97 DKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV 156
D W + F + K + ++ G++G A F MR G P + +
Sbjct: 292 DNWQAVISAFEKISK-----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
Y SLI A+ RD + +AL KMK E + ++VTY++I+ F++AG E +
Sbjct: 347 YTSLIHAYAVGRD----MDEALSCVRKMK-EEGIEMSLVTYSVIVGGFSKAGHAEAADYW 401
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
F + + + Y ++ A+ + + EA++ M+ + ++ ++D Y
Sbjct: 402 FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM 461
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
K VFK L P++ T+ ++ Y K KA V + M E G + T
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+ +I + + A +F+ +V+ ++ V N ++ +C A + +
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 397 SIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
++ P T+ + Y K+ G +P F
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 163/386 (42%), Gaps = 23/386 (5%)
Query: 29 PTRISFGSIPTRPKRKKTNDDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFL 88
P+R FG + R+ ET E R+ R I+ P R Y L+ H +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFE--RMRARGIT---PTSRI---YTSLI---HAYA 355
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
+ ++ D+ L C+ R M+++ M+ YS ++ K G A + F E +
Sbjct: 356 VGRDM---DEALSCV---RKMKEEGIEMSLV-TYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
+ S+Y +I AH + + +A A E E I Y+ ++ +
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEE-----EGIDAPIAIYHTMMDGYTMVA 463
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
++ +FK L E +P + TY +++ Y K G I + + MK K +L T++
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
++I+ + K + + VF+ +++ KP + +N+++ + D+A K+M ++
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
+ P+ T +I+ Y + ++ E+FD + V T N +++ ++A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAY 414
+ V + TY + + Y
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGY 669
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ LI ++G A L +M+ G +PD Y S ISA + D + +A
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD----MNRATQT 786
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
E+M+ + KPNI TY +++ +A+A E+ S ++++ + PD Y+ ++ +
Sbjct: 787 IEEMEAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
R I EA + CK +++ L++D
Sbjct: 846 SRASI--AEAYIYSGVMTICK-EMVEAGLIVD 874
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
+KG+ +A+ ++ +M + PD + +++A+ S + KA+ A E G+E
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFA-KETESSLGLEL- 259
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
N+VTYN ++ +A G VE + + + + E VS ++ TY ++ Y K+G++ E E
Sbjct: 260 --NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ +K + D + +L+D Y + Q +V +++ + + NS++ Y
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
K+ +AE +F +M + P T+ +L+ Y V +A +L D + + +V V
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Query: 371 TLNAMLDVY 379
T N +L Y
Sbjct: 438 TYNILLKGY 446
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 139/356 (39%), Gaps = 41/356 (11%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
S +++ + G AM E ++ G + YNSLI+ + D + + + L
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD-VEGMTRVLRLM 287
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ +G+ R N+VTY +++ + + G +E+ +F+ L E + D + Y +MD Y +
Sbjct: 288 SE-RGVSR---NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 242 RGMIR-----------------------------------EMEAMLTRMKSNQCKPDLIT 266
G IR E E + +RM KPD T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+N L+D Y + D+ ++ + + + P++ T+N ++ Y + +++K M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
+ G ++ +L+ ++A +L++ ++ + TLN M+ C
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
EA + + P TY+ L Y K + GI P +
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+ + LI+ K GQ A +FS M + +PD YN+L+ + + + +AL
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC----RAGYVDEALKL 423
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
++M E P ++TYNI+L+ +++ G V SL+K + + V+ D + + +++A
Sbjct: 424 CDQMCQKE-VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALF 482
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G E + + + D IT N++I K ++ ++ +++ ++ + KP++
Sbjct: 483 KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ 542
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+ ++ Y K +A V + M G P+ + +LI ++K +L L
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 361 VESKVQIKVSTLNAMLDVYC 380
+ V+T A++ +C
Sbjct: 603 RARGLTPTVATYGALITGWC 622
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 145/359 (40%), Gaps = 72/359 (20%)
Query: 101 PCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
CLE+F KQ+ + D Y K++ ++ S RN T Y
Sbjct: 86 ACLEIFNLASKQQKFRPDYKAYCKMVHIL-------------SRARNY---QQTKSYLCE 129
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+ A HS + + E ++ + + +++IL+ +A+ G V+ +F ++
Sbjct: 130 LVALNHS--------GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNM 181
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
P + + N ++ ++G + +M S + PD+ T ++++++Y +
Sbjct: 182 GNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNV 241
Query: 281 DKMEQVFKSLLRSKEKPS-------LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
DK +++ +KE S + T+NS++ Y + V + M+E G + +
Sbjct: 242 DK------AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 334 FVTHESLI----------------------------YMY-----GFCDC--VSKAKELFD 358
VT+ SLI +MY G+C + A + D
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++E V+ + N++++ YC + EA+ +F R + PD TY L Y +A
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI-VSPDIYTYNGVMDAYGKRGMIREMEA 250
PN + YN+ + +AGK+E LF DL S PD YTY ++ G I +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ M P+++T+N LI K D+ +++ L + P+ T+N+++
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 311 KARLKDKAENVFKQMTEMG 329
K+ +A + ++M E G
Sbjct: 837 KSGNVAEAMRLKEKMIEKG 855
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
P+ VYN I+ K L A F + +R P+ TY I++ A AG +
Sbjct: 717 PNNIVYNVAIAGLC----KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
+ +L ++ + P+I TYN ++ K G + + +L ++ P+ IT+N LI
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 272 DSYGKKQQFD-----KMEQVFKSLLRSKEK 296
D K K + + K L+R +K
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGLVRGSDK 862
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 6/311 (1%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
F W ++ D G YS ++ +G++ M + M G PD ++ +
Sbjct: 138 FDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLEC----LTIAM 193
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
S + + +A+ FE+ + K + ++N +LR + V S+F + + +
Sbjct: 194 DSFVRVHYVRRAIELFEESESFG-VKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNI 251
Query: 226 SPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ 285
D +YN ++ + K G + EME +L M + PD ++++ LI+ G+ + + +
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
+F ++ P +N+M+ N+ AR D++ +++M + P+ T+ L+
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 346 FCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAS 405
VS A E+F+ ++ V + + L C P A ++Q++R S
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 406 TYKLLYKAYTK 416
YKLL K ++
Sbjct: 432 AYKLLLKRLSR 442
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 150/367 (40%), Gaps = 41/367 (11%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRL---------------------------- 137
F+W +KQR Y Y +I K Q +L
Sbjct: 121 FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYAR 180
Query: 138 ------AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCK 191
A++ F+ M P+ +N L+SA K+K + KA FE M+ +R
Sbjct: 181 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC----KSKNVRKAQEVFENMR--DRFT 234
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+ TY+I+L + + + + +F+++ ++ PDI TY+ ++D K G + E +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
+ M + CKP +++L+ +YG + + ++ F + RS K + FNS++ + K
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
A V K+M G P+ + ++ +A ++F +++ + T
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADT 413
Query: 372 LNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXX 431
++ ++C + AD +++ R V P T+ +L + +
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Query: 432 XXGIIPN 438
GI P+
Sbjct: 474 EMGIRPS 480
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 126/251 (50%), Gaps = 11/251 (4%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L E GK EVFR M + D YS ++ ++ K G+ A+ + M
Sbjct: 242 ILLEGWGKEPNLPKAREVFREMIDAGCH-PDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFA 205
+ C+P T +Y+ L+ H+ L +A+ F +M+ GM K ++ +N ++ AF
Sbjct: 301 SICKPTTFIYSVLV----HTYGTENRLEEAVDTFLEMERSGM---KADVAVFNSLIGAFC 353
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+A +++ V + K++ V+P+ + N ++ +RG E + +M C+PD
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDAD 412
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T+ ++I + +K++ + ++V+K + + PS+ TF+ ++ + R KA + ++M
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 326 TEMGYAPSFVT 336
EMG PS VT
Sbjct: 473 IEMGIRPSGVT 483
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+YS L+ G + + A+ F EM +G + D +V+NSLI A + ++ K + + L
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA-NRMKNVYRVLKE 367
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
K KG+ PN + NIILR + G+ ++ +F+ + + + PD TY V+ +
Sbjct: 368 M-KSKGV---TPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFC 422
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
++ + + + M+ P + TF++LI+ +++ K + + ++ +PS
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTE 327
TF + + +K++ E+V K + E
Sbjct: 483 TFGRL----RQLLIKEEREDVLKFLNE 505
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
AD V++ LI K + + + EM++ G P++ N +I HL R + +
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN-IILRHLIERGEKD---E 395
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A F KM ++ C+P+ TY ++++ F + ++E + ++K + + V P ++T++ ++
Sbjct: 396 AFDVFRKM--IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ + ++ +L M +P +TF L K+++ D
Sbjct: 454 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 58/335 (17%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH------------LHSRD 169
Y+ LIS + ++G A LF EM+ +G PD+ +N+L+ L +
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 170 KTKALAKALGYFEKMKGMERC------------------KPNIVTYNIILRAFAQAGKVE 211
K + GY + G+ R KP+I+ Y I+++ ++AGK+E
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
L + +SPD Y YN V+ A RG++ E ++ M + PD T +LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 272 DSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
S + + E++F + +S PS+ TFN+++ K+ +A + +M E+G
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRP 474
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK----------------VSTLNAM 375
S F FD +VES +K + + N +
Sbjct: 475 ASL-----------FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
++ +C A L + + PD+ TY L
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
D+ + LIS K G A+ F M+ CRPD YN ++ + R++ +
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM--REEVFFMLA 182
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
Y E +K C PN+ T+ I++ + G+ +F D+ +SP+ TY ++
Sbjct: 183 FAVYNEMLKC--NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+RG + + M+++ PD + N L+D + K +M + F+ LLR EK
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK---LGRMVEAFE-LLRLFEK 296
Query: 297 P----SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
L ++S++ +AR +A ++ M + P + + LI +
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
A +L + + NA++ C L +E SL + PDA T+ +L
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 137 LAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVT 196
LA +++EM C P+ + L+ L+ + +T + A F+ M G PN VT
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDG-LYKKGRT---SDAQKMFDDMTG-RGISPNRVT 235
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML---- 252
Y I++ Q G + LF ++ S PD +N ++D + K G + E +L
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 253 -------------------------------TRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
M KPD+I + +LI K + +
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
++ S+ P +N+++ L ++ ++ +M+E P TH LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
V +A+E+F + +S V+T NA++D C + +EA L +
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 25/233 (10%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR---DKTKALAKA 177
+Y+ LI + K G+ A+ L S M + G PDT YN++I A L R ++ ++L
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA-LCGRGLLEEGRSLQLE 398
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ E P+ T+ I++ + + G V + +F ++++S SP + T+N ++D
Sbjct: 399 MSETESF-------PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ------VFKSLL 291
K G ++E +L +M+ +P + L S+ + FD M + ++ L
Sbjct: 452 GLCKSGELKEARLLLHKMEVG--RPASLFLRL---SHSGNRSFDTMVESGSILKAYRDLA 506
Query: 292 R---SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ P + ++N ++ + +A D A + + G +P VT+ +LI
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
++L VS D Y + ++ AY K GM + RMK C+PD+ T+N+++ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 277 KQQFDKME-QVFKSLLRSKEKPSLPTFNSMVLN-YGKARLKDKAENVFKQMTEMGYAPSF 334
++ F + V+ +L+ P+L TF ++ Y K R D A+ +F MT G +P+
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSD-AQKMFDDMTGRGISPNR 233
Query: 335 VTHESLIYMYGFCD--CVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
VT+ LI G C A++LF + S NA+LD +C
Sbjct: 234 VTYTILI--SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 12/305 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D V++ L+S G+ A L ++MR G P+ + Y LI A + K + +A
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE---KRMDEA 326
Query: 178 LGYFEKMKGMER--CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+ F +M ER C+ +IVTY ++ F + G +++ S+ D+ + V P TY +
Sbjct: 327 MRVFVEM---ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI 383
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
M A+ K+ E ++ +MK C PDL+ +N++I K + + +++ + +
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY--APSFVTHESLIYMYGFCDCVSKA 353
P + TF M+ + +A N FK+M G AP + T +SL+ D + A
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Query: 354 KELFDGLVE--SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLY 411
K+++ + S ++ VS + +EA S + ++P +TY L
Sbjct: 504 KDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLM 563
Query: 412 KAYTK 416
K K
Sbjct: 564 KGLNK 568
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 126/279 (45%), Gaps = 7/279 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ + EM G PD V+ L+ A K ++ +A FE M+ E+ PN+ +
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALC----KNGSVKEASKVFEDMR--EKFPPNLRYF 239
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+L + + GK+ + + + E+ + PDI + ++ Y G + + ++ M+
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 258 NQCKPDLITFNLLIDSYGK-KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+P++ + +LI + + +++ D+ +VF + R + + T+ +++ + K + D
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMID 359
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
K +V M + G PS VT+ ++ + + + EL + + + N ++
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+ C +EA L+ + + P T+ ++ +T
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 147/335 (43%), Gaps = 42/335 (12%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ ++ +I+ + G A+ +M+ G P TS YN+LI + + K + ++
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA-GKPERSSEL 172
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG--- 234
L + +G PNI T+N++++A+ + KVE+ + K ++E V PD TYN
Sbjct: 173 LDLMLE-EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 235 ----------------------------------VMDAYGKRGMIREMEAMLTRMKSNQC 260
V+ Y + G +R+ + RMK +
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+ +L+ FN LI+ + + D +++V + K + T+++++ + A +KA
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL-VESKVQIKVSTLNAMLDVY 379
VFK+M + G P + L Y KA+EL + L VES+ + + T ++ +
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFT--TVISGW 409
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
C N +A +F + V P+ T++ L Y
Sbjct: 410 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 152/334 (45%), Gaps = 43/334 (12%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH------------------ 164
+KL++V+ ++G+ A +F + TG RP Y +L++A
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 165 -------------LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
+++ ++ + A+ KMK + P TYN +++ + AGK E
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKEL-GLNPTTSTYNTLIKGYGIAGKPE 167
Query: 212 QVNSLFKDLDESI---VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ + L + E V P+I T+N ++ A+ K+ + E ++ +M+ +PD +T+N
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 269 LLIDSYGKKQQFDKMEQ--VFKSLLRSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQM 325
+ Y +K + + E V K +++ K KP+ T +V Y + R++D V ++M
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV-RRM 286
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSK--AKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
EM + V SLI GF + + + E+ + E V+ V T + +++ +
Sbjct: 287 KEMRVEANLVVFNSLI--NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
++A +F+ V PDA Y +L K Y +A
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA--L 174
AD YS +++ G A +F EM G +PD Y+ L ++ +++ KA L
Sbjct: 328 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ L + +PN+V + ++ + G ++ +F + + VSP+I T+
Sbjct: 388 LETL--------IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
+M Y + + E +L M+ KP+ TF LL +++
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 167/424 (39%), Gaps = 73/424 (17%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L +L + ++ + R M+K R + Y+ LI+ +G+ +A L +EM +
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKAL-------AKAL---------------------- 178
G P+ +N+LI H+ + +AL AK L
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 179 --GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
G++ +MK C I TY ++ + G +++ L ++ + + PDI TY+ ++
Sbjct: 427 ARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKP---------------------------------- 262
+ + K G + + ++ R+ P
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 263 -DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
D TFN+L+ S K + + E+ + + P+ +F+ ++ YG + KA +V
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
F +MT++G+ P+F T+ SL + G C + +A++ L + N +L
Sbjct: 606 FDEMTKVGHHPTFFTYGSL--LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXG-IIPN 438
C + +A SLF +LPD+ TY L + G ++PN
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 439 KRFF 442
K +
Sbjct: 724 KVMY 727
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 134/323 (41%), Gaps = 9/323 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ ++ KKG+ + A+ L M++ G D YN LI H ++ +AK
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI----HDLCRSNRIAKGYLLL 326
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ PN VTYN ++ F+ GKV + L ++ +SP+ T+N ++D +
Sbjct: 327 RDMR-KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G +E M M++ P +++ +L+D K +FD + + R+ T
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
+ M+ K D+A + +M++ G P VT+ +LI GFC AKE+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI--NGFCKVGRFKTAKEIVCR 503
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+ + + ++ C +EA +++ D T+ +L + KA
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 420 XXXXXXXXXXXXXXGIIPNKRFF 442
GI+PN F
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSF 586
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 141/365 (38%), Gaps = 40/365 (10%)
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
M R ++ VY LI V ++G + ++ +F M G P N+++ + + S
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+ + + ++M + C P++ T+NI++ G E+ + L + +++S +P
Sbjct: 213 EDVSVWS----FLKEMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 267
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
I TYN V+ Y K+G + +L MKS D+ T+N+LI + + K + +
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI------- 341
+ + P+ T+N+++ + A + +M G +P+ VT +LI
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 342 ---------YMY---GFCDCVSKAKELFDGLVESK----------------VQIKVSTLN 373
YM G L DGL ++ V + T
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXX 433
M+D C N EA L + PD TY L + K
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 434 GIIPN 438
G+ PN
Sbjct: 508 GLSPN 512
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 4/291 (1%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
D +Y+ L++ M K G A+ LF EM PD+ Y SLIS L + KT
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG-LCRKGKT---VI 706
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A+ + ++ + PN V Y + +AG+ + + +D +PDI T N ++
Sbjct: 707 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D Y + G I + +L M + P+L T+N+L+ Y K++ +++S++ +
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P T +S+VL ++ + + + K G T LI ++ A +L
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
+ + + T +AM+ V N+ QE+ + + P++ Y
Sbjct: 887 VKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 140/356 (39%), Gaps = 45/356 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI+ K G+ + A + + G P+ +Y++LI ++ + L +A+ +
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI----YNCCRMGCLKEAIRIY 536
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E M +E + T+N+++ + +AGKV + + + + P+ +++ +++ YG
Sbjct: 537 EAMI-LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + ++ M P T+ L+ K + E+ KSL
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD------CVSKAKE 355
+N+++ K+ KA ++F +M + P T+ SLI G C + AKE
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS--GLCRKGKTVIAILFAKE 713
Query: 356 ----------------LFDGLVES---KVQI-------------KVSTLNAMLDVYCINN 383
DG+ ++ K I + T NAM+D Y
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
++ + L + P+ +TY +L Y+K GI+P+K
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 102/250 (40%)
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
C N Y+I++R + + G ++ +F+ + +P +YT N ++ + K G +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
+ L M + PD+ TFN+LI+ + F+K + + + +S P++ T+N+++ Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
K A + M G T+ LI+ + ++K L + + +
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXX 429
T N +++ + A L S + P+ T+ L + +
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 430 XXXXGIIPNK 439
G+ P++
Sbjct: 399 MEAKGLTPSE 408
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG-CRPDTSVYNSLISAHLHSRDK 170
QR + D+ Y+ LIS + +KG+T +A+ E G P+ +Y + +
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ- 739
Query: 171 TKALAKALGYF-EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
KA YF E+M + P+IVT N ++ +++ GK+E+ N L ++ P++
Sbjct: 740 ----WKAGIYFREQMDNLGH-TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
TYN ++ Y KR + + + N PD +T + L+ + + ++ K+
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 854
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
+ + TFN ++ + A ++ K MT +G +
Sbjct: 855 FICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD-KTKALAK 176
D ++SV+ + + + + + EM G P++ Y LI+ D KT + K
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
E+M + C PN V + ++RA A+ GK ++ L + + + + P I ++ +M
Sbjct: 958 -----EEMIAHKICPPN-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
K G + E + M + K DL+++N+LI
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 145/322 (45%), Gaps = 29/322 (9%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L+ KK + A + +M G RPDT YN++ + ++ + +A ++ +
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVV--- 247
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
EKM E+ KPN T I++ + + G+V + + E V ++ +N +++ + +
Sbjct: 248 EKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Query: 242 ---RGMIREME----------------------AMLTRMKSNQCKPDLITFNLLIDSYGK 276
R I E+ +LT MK K D+IT++ +++++
Sbjct: 308 VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSS 367
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVT 336
+K QVFK ++++ KP ++ + Y +A+ KAE + + + + P+ V
Sbjct: 368 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVI 426
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
++I + + A +F+ + + V + T ++ Y P +A+ + Q R
Sbjct: 427 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 486
Query: 397 SIKVLPDASTYKLLYKAYTKAN 418
V P+ ST+ LL +A+ A
Sbjct: 487 GCGVKPENSTFLLLAEAWRVAG 508
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 67/360 (18%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ ++ +I+ + G A+ +M+ G P TS YN+LI + + K + ++
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA-GKPERSSEL 172
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG--- 234
L + +G PNI T+N++++A+ + KVE+ + K ++E V PD TYN
Sbjct: 173 LDLMLE-EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 235 ----------------------------------VMDAYGKRGMIREMEAMLTRMKSNQC 260
V+ Y + G +R+ + RMK +
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLL-------------------------RSKE 295
+ +L+ FN LI+ + + D +++V +LL
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
K + T+++++ + A +KA VFK+M + G P + L Y KA+E
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 356 LFDGL-VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
L + L VES+ + + T ++ +C N +A +F + V P+ T++ L Y
Sbjct: 412 LLETLIVESRPNVVIFT--TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 152/359 (42%), Gaps = 68/359 (18%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH------------------ 164
+KL++V+ ++G+ A +F + TG RP Y +L++A
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 165 -------------LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
+++ ++ + A+ KMK + P TYN +++ + AGK E
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKEL-GLNPTTSTYNTLIKGYGIAGKPE 167
Query: 212 QVNSLFKDLDESI---VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ + L + E V P+I T+N ++ A+ K+ + E ++ +M+ +PD +T+N
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 269 LLIDSYGKKQQFDKMEQ--VFKSLLRSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQM 325
+ Y +K + + E V K +++ K KP+ T +V Y + R++D V ++M
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV-RRM 286
Query: 326 TEMGYAPSFVTHESLIYMYGFCDCVSKAK---------------------------ELFD 358
EM + V SLI GF + + + ++
Sbjct: 287 KEMRVEANLVVFNSLI--NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLT 344
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ E V+ V T + +++ + ++A +F+ V PDA Y +L K Y +A
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 403
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA--L 174
AD YS +++ G A +F EM G +PD Y+ L ++ +++ KA L
Sbjct: 353 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 412
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ L + +PN+V + ++ + G ++ +F + + VSP+I T+
Sbjct: 413 LETL--------IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
+M Y + + E +L M+ KP+ TF LL +++
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 138/302 (45%), Gaps = 15/302 (4%)
Query: 103 LEVFRWMQKQRWYMA--DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
L+V W + Q+ Y + Y+K I + G+ LA++LF E + SVYNSL
Sbjct: 86 LQVLEWRRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLFDEAAKKRMQT-ASVYNSL 144
Query: 161 ISAHLHSRDKTKALAKAL-GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
+S ++ + LA+ F+ + C P +VTYNI++ + + V+ + + F++
Sbjct: 145 MSVYMWN-----GLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEE 199
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
L + + P+ TYN ++ Y +MEA MK +PD T+ L++ Y
Sbjct: 200 LQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGN 259
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD---KAENVFKQMTEMGYAPSFVT 336
++ME++++ + S P +M+ Y K ++D K EN+ ++ Y P
Sbjct: 260 LNRMEEMYEVIKDQVGVNSGPLVRAMICAYCKKAVEDRVQKIENLLSLLSGEEYLPWL-- 317
Query: 337 HESLIYMYGFCDCVSKAKELFDGLVESKVQI-KVSTLNAMLDVYCINNLPQEADSLFQRA 395
+ LI +Y D V + + E K + K S + A++ Y N + +RA
Sbjct: 318 NVLLIRLYAQEDFVEAMESKINEAFEQKTCVNKSSIMRAIIAAYFRCNEVDNLANFVKRA 377
Query: 396 RS 397
S
Sbjct: 378 ES 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 127/296 (42%), Gaps = 15/296 (5%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
C +F+ ++Q Y+ L+SV G+ + F E++ P++ YN LI
Sbjct: 157 CQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLI 216
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ ++ + + K A F++MK +P+ TY ++LR +A +G + ++ +++ +
Sbjct: 217 AGYMTAWNWDKMEAT----FQEMK-RGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIK 271
Query: 222 ESIVSPDIYTYNGVMDAYGKRGM---IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+ + ++ AY K+ + ++++E +L+ + + P L LLI Y ++
Sbjct: 272 DQVGVNSGPLVRAMICAYCKKAVEDRVQKIENLLSLLSGEEYLPWLNV--LLIRLYAQED 329
Query: 279 QFDKMEQVFKSLLRSK---EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
+ ME K K S+ +++ Y + D N K+ G+
Sbjct: 330 FVEAMESKINEAFEQKTCVNKSSI--MRAIIAAYFRCNEVDNLANFVKRAESAGWKLCRS 387
Query: 336 THESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSL 391
+ I MYG + + + + + E+ + T M+ Y + + +A+ +
Sbjct: 388 LYHCKIMMYGSQKRFEEMEGVVNEMAETNYGLVTKTFAIMIKAYKNHGMESDAEKV 443
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
L S++G K Q +L W++ +M G PD YN ++ A+ KT L + L K
Sbjct: 229 LHSLLGVK-QYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFR-LGKTDRLYRLLDEMVK- 285
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
+ P++ TYNI+L A K +L + E V P + + ++D + G
Sbjct: 286 ---DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ + + C PD++ + ++I Y + +K E++FK + + P++ T+NS
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
M+ + A +A + K+M G P+FV + +L+ V +A E+ +VE
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 13/309 (4%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI---- 161
F W Q + Y L+ + + G+ + L EM G +N LI
Sbjct: 139 FVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCG 198
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
A L +RD + K+ + +P +YN IL + + + ++ +++ +
Sbjct: 199 EAGL-ARDVVEQFIKSKTF--------NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML 249
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
E +PD+ TYN VM A + G + +L M + PDL T+N+L+ +
Sbjct: 250 EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPL 309
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + +P + F +++ +A + + + ++G P V + +I
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
Y + KA+E+F + E V T N+M+ +C+ +EA +L + S
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 402 PDASTYKLL 410
P+ Y L
Sbjct: 430 PNFVVYSTL 438
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 133 GQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKP 192
G+T L EM G PD YN L+ HL + +K A L + ++ G+E P
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLH-HLATGNKPLAALNLLNHMREV-GVE---P 325
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
++ + ++ ++AGK+E + + +PD+ Y ++ Y G + + E M
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA 312
M P++ T+N +I + +F + + K + P+ ++++V N A
Sbjct: 386 KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNA 445
Query: 313 RLKDKAENVFKQMTEMGYAPSFVT 336
+A V K M E G+ ++
Sbjct: 446 GKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/270 (16%), Positives = 107/270 (39%)
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+KT+ A +F G E + Y+++++ FA+ G+ + + L ++ +
Sbjct: 127 NKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTT 186
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
T+N ++ G+ G+ R++ + K+ +P ++N ++ S +Q+ ++ V++
Sbjct: 187 ACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYE 246
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
+L P + T+N ++ + D+ + +M + G++P T+ L++ +
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 349 CVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
A L + + E V+ V ++D + + PD Y
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 409 LLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
++ Y G +PN
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 95/243 (39%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
T+N+++ +AG V F P ++YN ++ + + ++ + +M
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+ PD++T+N+++ + + + D++ ++ +++ P L T+N ++ +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
A N+ M E+G P + +LI + K D V+ V M
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGI 435
+ Y ++A+ +F+ LP+ TY + + + A G
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 436 IPN 438
PN
Sbjct: 429 NPN 431
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 124/241 (51%), Gaps = 11/241 (4%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
EV ++ +K +++ V +++ + G G A LF EM C +N+L+SA
Sbjct: 108 EVLQYQKKFDDIKSEDFVI-RIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSA 166
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
+++S K L +A+ F+++ P++VTYN +++A + G ++ + S+F++L+++
Sbjct: 167 YVNS----KKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
PD+ ++N +++ + +R + E + + MKS P++ ++N + + ++F
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK---QMTEMGYAPSFVTHESL 340
+ + P + T+N+++ Y R+ + E V K +M E G P VT+ L
Sbjct: 283 LNLIDVMKTEGISPDVHTYNALITAY---RVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Query: 341 I 341
I
Sbjct: 340 I 340
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 112/232 (48%), Gaps = 39/232 (16%)
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI-VSPDIYTYNGVMDAY 239
F++M + C+ + ++N +L A+ + K+++ FK+L E + ++PD+ TYN ++ A
Sbjct: 145 FDEMPEL-NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPS 298
++G + ++ ++ ++ N +PDLI+FN L++ + +++ F + ++++ L++SK P+
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW-DLMKSKNLSPN 262
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
+ ++NS V + + A N+ M G +P
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD------------------------- 297
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
V T NA++ Y ++N +E + + + PD TY +L
Sbjct: 298 ----------VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
++ F+ + ++ D Y+ +I + +KG + +F E+ G PD +N+L+
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ R+ + ++ MK + PNI +YN +R + K +L +
Sbjct: 236 E-EFYRRE---LFVEGDRIWDLMKS-KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK 290
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+SPD++TYN ++ AY + E+ MK PD +T+ +LI KK D
Sbjct: 291 TEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLD 350
Query: 282 KMEQVFKSLLRSK 294
+ +V + ++ K
Sbjct: 351 RAVEVSEEAIKHK 363
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 13/249 (5%)
Query: 197 YNIILRAFAQAGKVEQVNSLF---KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
Y+ +R +A K ++ + K D+ I S D +M YG GM +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDD-IKSEDFVIR--IMLLYGYSGMAEHAHKLFD 146
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK----PSLPTFNSMVLNY 309
M C+ + +FN L+ +Y ++ D+ + FK L EK P L T+N+M+
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL---PEKLGITPDLVTYNTMIKAL 203
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
+ D ++F+++ + G+ P ++ +L+ + + + ++D + + +
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXX 429
+ N+ + N +A +L ++ + PD TY L AY N+
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 430 XXXXGIIPN 438
G+ P+
Sbjct: 324 MKEKGLTPD 332
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 144/322 (44%), Gaps = 14/322 (4%)
Query: 95 KHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDT 154
+ ++W ++FR M K + D+ ++ K++ G + S + G
Sbjct: 158 RENRWREVAKLFRLMMKDG-VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
V NS+++ + K L A +F +M+ ER +++ +N +L A+ Q GK E+
Sbjct: 217 RVSNSILAVYA----KCGELDFATKFFRRMR--ER---DVIAWNSVLLAYCQNGKHEEAV 267
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
L K++++ +SP + T+N ++ Y + G ++ +M++ D+ T+ +I
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
+ +F+ + + P+ T S V ++ ++ V +MG+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ SL+ MY C + A+++FD V++K V T N+M+ YC +A LF R
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDS-VKNK---DVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 395 ARSIKVLPDASTYKLLYKAYTK 416
+ + P+ T+ + Y K
Sbjct: 444 MQDANLRPNIITWNTMISGYIK 465
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 153/355 (43%), Gaps = 26/355 (7%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGC 150
+G +++ C MQK + AD ++ +IS + G A+ +F +M G
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 151 RPDTSVYNSLISAH-----LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
P+ S +SA ++ + ++A +G+ + +++ N ++ ++
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID----------DVLVGNSLVDMYS 398
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
+ GK+E +F +S+ + D+YT+N ++ Y + G + + TRM+ +P++I
Sbjct: 399 KCGKLEDARKVF----DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLR-SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
T+N +I Y K + +F+ + + K + + T+N ++ Y + KD+A +F++
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + P+ VT SL+ +E+ ++ + + NA+ D Y +
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNK 439
+ + ++F + D T+ L Y S GI PN+
Sbjct: 575 IEYSRTIFLGMET----KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 25/261 (9%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
PD V L+S + K +A A F+ M+ ER N+ T++ ++ A+++ +
Sbjct: 113 PDVFVETKLLSMYA----KCGCIADARKVFDSMR--ER---NLFTWSAMIGAYSRENRWR 163
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMI---REMEAMLTRMKSNQCKPDLITFN 268
+V LF+ + + V PD + + ++ G + + + +++ ++ + C L N
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC---LRVSN 220
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
++ Y K + D + F+ R +E+ + +NS++L Y + ++A + K+M +
Sbjct: 221 SILAVYAKCGELDFATKFFR---RMRERDVI-AWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 329 GYAPSFVTHESLIYMY---GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
G +P VT LI Y G CD A +L + + V T AM+ N +
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCD---AAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 386 QEADSLFQRARSIKVLPDAST 406
+A +F++ V+P+A T
Sbjct: 334 YQALDMFRKMFLAGVVPNAVT 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 47/274 (17%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTG-CRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
++ +IS K G AM LF M G + +T+ +N +I+ ++ + K +AL
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE----L 511
Query: 181 FEKMKGMERCKPNIVT--------------------YNIILR---------------AFA 205
F KM+ R PN VT + +LR +A
Sbjct: 512 FRKMQ-FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++G +E ++F ++ + DI T+N ++ Y G A+ +MK+ P+
Sbjct: 571 KSGDIEYSRTIFLGME----TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
T + +I ++G D+ ++VF S+ P+L ++MV YG+A ++A ++
Sbjct: 627 TLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
Query: 325 MTEMGYAPSFVTHESLIYMYGFCD-CVSKAKELF 357
M P + + + ++G D + A+ LF
Sbjct: 687 MNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 145/332 (43%), Gaps = 12/332 (3%)
Query: 21 SNAPRSAPPTRISFGSIPTRPKRKKTNDDDSETRE-LVRLLTRKISDKEPLERTLNKYVR 79
+ +P + T+ + S TRP R++ + E L + R + ++ R N
Sbjct: 51 TQSPDAKSETKKNLTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRD 110
Query: 80 LVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAM 139
LV L++ L K L+ FRW ++ D + K+I ++G+ + A
Sbjct: 111 LVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHAR 170
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMK--GMERCKPNIVTY 197
+ +M G D ++ LI ++ K + +++ F+KMK G+ER I +Y
Sbjct: 171 CILLDMPEKGVPWDEDMFVVLIESY----GKAGIVQESVKIFQKMKDLGVERT---IKSY 223
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
N + + + G+ F + V P +TYN ++ + + MK+
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT 283
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD TFN +I+ + + ++ D+ E++F + +K PS+ ++ +M+ Y D
Sbjct: 284 RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDD 343
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+F++M G P+ T+ +L + G CD
Sbjct: 344 GLRIFEEMRSSGIEPNATTYSTL--LPGLCDA 373
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+EVFR M +R + D Y L+ + K+ + A+ L EM++ GC P +YN LI
Sbjct: 207 IEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
D T+ F +KG C PN VTYN ++ GK+++ SL + +
Sbjct: 266 GLCKKGDLTRVTKLVDNMF--LKG---CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 223 SIVSPDIYTY----NGV---------------MDAYG----------------KRGMIRE 247
S P+ TY NG+ M+ G K G E
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
++ +M CKP+++ +++L+D ++ + ++ +++ ++ S P+ T++S++
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
+ K L ++A V+K+M + G + + + LI G C V + KE
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI--DGLCG-VGRVKE 485
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 114/234 (48%), Gaps = 8/234 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
++R Y + +YS LIS + K+G+ AM L+ +M GC+P+ VY+ L+ R+
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG--LCREG 411
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
AK + +M C PN TY+ +++ F + G E+ ++K++D++ S + +
Sbjct: 412 KPNEAKEI--LNRMIA-SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
Y+ ++D G ++E + ++M + KPD + ++ +I D +++ +
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 291 L---RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
L K +P + T+N ++ + +A ++ M + G P +T + +
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 9/274 (3%)
Query: 147 NTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM--ERCKPNIVTYNIILRAF 204
N P+ +N +I A R +A+ E +GM +C P+ TY ++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAI-------EVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
+ ++++ L ++ SP YN ++D K+G + + ++ M C P+
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+N LI K + DK + + ++ SK P+ T+ +++ K R A +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M E GY + + LI +A L+ + E + + + ++D C
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
P EA + R + LP+A TY L K + K
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS L+ K G A+ ++ EM TGC + Y+ LI L + K +A+ +
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG-LCGVGRVK---EAMMVW 490
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL---DESIVSPDIYTYNGVMDA 238
KM + KP+ V Y+ I++ G ++ L+ ++ +E PD+ TYN ++D
Sbjct: 491 SKMLTIG-IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
+ I +L M C PD+IT N +++ +K
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 21/289 (7%)
Query: 133 GQTRLAMWLFSEMRNTGCRPDTSVYNSLISA--HLHSRDKTKALAKALGYFEKMKGMER- 189
G + +F EM GC PD+ Y +LIS D+ K L F +M +E+
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKL------FTEM--VEKD 222
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
C P +VTY ++ + V++ +++ + P+++TY+ +MD K G R ++
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG--RSLQ 280
Query: 250 AM--LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
AM M + C+P+++T+ LI K+Q+ + ++ + KP + ++
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI-----YMYGFC-DCVSKAKELFDGLV 361
+ +A N +M G P+ +T + + G C + S+A L+ +
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMR 400
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ ++V TL +++ C Q+A L + +P T+KLL
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 104 EVFRWMQKQRWYMADNGV--YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
E R++++ + + V YS L+ + K G++ AM LF M GCRP+ Y +LI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ K + + +A+ ++M ++ KP+ Y ++ F K + + ++
Sbjct: 305 TGLC----KEQKIQEAVELLDRMN-LQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 222 ESIVSPDIYTYN-----------GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++P+ T+N G+ Y R + M+S ++ T L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAF-----TLYLSMRSRGISVEVETLESL 414
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV 306
+ KK +F K Q+ ++ PS T+ ++
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 139/307 (45%), Gaps = 4/307 (1%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR D Y+ LI+ + + G+ A+ +++ M +G PD +L+ H+R
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
A E++K R K + V YN ++ F +AG++E+ +L + + PD+ T
Sbjct: 202 LAYEMVA---EEIKS-ARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
YN +++ Y M++ E ++ M + + D ++N L+ + + DK +
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVS 351
+ + ++++++ + +A KA +F++M + G + VT+ SLI + S
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 352 KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLY 411
AK+L D + E + +LD C + +A +F ++ PDA +Y L
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 412 KAYTKAN 418
++
Sbjct: 438 SGLCRSG 444
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 140/375 (37%), Gaps = 76/375 (20%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
E W K + YS+ IS + K + L L S+M G PD +N +
Sbjct: 64 EAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFN--VYL 121
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
L R+ A + +G E P++V+Y I++ +AGKV ++ + S
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGRE---PDVVSYTILINGLFRAGKVTDAVEIWNAMIRS 178
Query: 224 IVSPD------------------------------------IYTYNGVMDAYGKRGMIRE 247
VSPD YN ++ + K G I +
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
EA+ + M C+PDL+T+N+L++ Y + E V ++RS + ++N ++
Sbjct: 239 AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
+ + DK N + E P GFCD VS
Sbjct: 299 RHCRVSHPDKCYNFMVKEME----PR-----------GFCDVVS---------------- 327
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXX 427
+ +++ +C + ++A LF+ R ++ + TY L KA+ + +
Sbjct: 328 ----YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 428 XXXXXXGIIPNKRFF 442
G+ P++ F+
Sbjct: 384 DQMTELGLSPDRIFY 398
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 10/300 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y I+ + K G A+ +F EMR++ R + YN I + R+ LA+A+ +
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLV--RESRFELAEAIYWD 69
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
K G TY+ + + K + +++L D++ PDI+ +N +D +
Sbjct: 70 MKPMGFSLIP---FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ M +PD++++ +LI+ + + +++ +++RS P
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 302 FNSMVLNYGKARLKDKA-ENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFD 358
++V+ AR D A E V +++ S V + +LI GFC + KA+ L
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI--SGFCKAGRIEKAEALKS 244
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ + + + T N +L+ Y NN+ + A+ + + DA +Y L K + + +
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 38/255 (14%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ LIS K G+ A L S M GC PD YN L++ + + L +A G
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN----NMLKRAEGV 277
Query: 181 FEKM---------------------------------KGME-RCKPNIVTYNIILRAFAQ 206
+M K ME R ++V+Y+ ++ F +
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCR 337
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
A + LF+++ + + ++ TY ++ A+ + G + +L +M PD I
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ ++D K DK VF ++ + P ++NS++ ++ +A +F+ M
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 327 EMGYAPSFVTHESLI 341
P +T + +I
Sbjct: 458 GKECCPDELTFKFII 472
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKV 210
D Y++LI + + KA FE+M KGM N+VTY +++AF + G
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYR----LFEEMRQKGMVM---NVVTYTSLIKAFLREGNS 376
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
L + E +SPD Y ++D K G + + + M ++ PD I++N L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
I + + + ++F+ + + P TF ++ + + A V+ QM + G+
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 331 APSFVTHESLI 341
++LI
Sbjct: 497 TLDRDVSDTLI 507
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 160/355 (45%), Gaps = 41/355 (11%)
Query: 92 ELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCR 151
ELGK L++F M+++ D ++S ++ K + A+ + M++
Sbjct: 360 ELGK------ALDLFNRMEEE-GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA 412
Query: 152 PDTSVYNSLISAHLHSRDKTKAL-----------------------------AKALGYFE 182
P + + +++I L + AL A F
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
KM + +PN+V YN ++ A + ++ S+F ++ E + P+ +TY+ ++D + K
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPT 301
+ ++ +M ++ + + + +N +I+ K Q K +++ ++L++ K S +
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDG 359
+NS++ + K D A +++M+E G +P+ VT SLI GFC + A E+
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI--NGFCKSNRMDLALEMTHE 650
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
+ ++++ + A++D +C N + A +LF + ++P+ S Y L +
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/392 (18%), Positives = 152/392 (38%), Gaps = 45/392 (11%)
Query: 87 FLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMR 146
FLLF + GK D L+ M +Q+ + Y+ ++ + LA +FSEM
Sbjct: 456 FLLFCKQGKVDAATSFLK----MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 147 NTGCRPDTSVYNSLISAHLHSRDKTKA-------------------------------LA 175
G P+ Y+ LI ++D+ A +
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
KA + + +R + +YN I+ F + G + ++++ E+ SP++ T+ +
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
++ + K + M MKS + K DL + LID + KK +F L
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
P++ +NS++ + D A +++K+M G + T+ ++I ++ A +
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQ-----EADSLFQRARSIKVLPDASTYKLL 410
L+ L++ + + +L + +N L + +A + + + V P+ Y +
Sbjct: 752 LYSELLDLGI-----VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Query: 411 YKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
+ + + GI+ + F
Sbjct: 807 IAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y LI KK + A LFSE+ G P+ SVYNSLIS R+ K + A+ +
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF---RNLGK-MDAAIDLY 718
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+KM + ++ TY ++ + G + + L+ +L + + PD + +++ K
Sbjct: 719 KKMVN-DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+G + ML MK P+++ ++ +I + ++ ++ ++ +L
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 302 FNSMV 306
FN +V
Sbjct: 838 FNLLV 842
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 146/364 (40%), Gaps = 29/364 (7%)
Query: 74 LNKYVRLVRTEH---CFLLFEELGKHDKWLPCLE-VFRWMQKQRWYMADNGVYSK--LIS 127
LN Y+R R ++ CF L + K ++P + V + + +Y+K LI
Sbjct: 176 LNAYIRNKRMDYAVDCFGLMVD-RKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234
Query: 128 VMGKKGQTRL-------------AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
V G T+L A+ +F + + G PD +++ + A KT L
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAAC----KTPDL 290
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
AL +M+G + TY ++ AF + G +E+ + ++ + +
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
+++ Y K + + + RM+ PD + F+++++ + K + +K + + + +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSK 352
PS ++M+ KA + A +F E A F+ ++ + FC V
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL---FCKQGKVDA 467
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A + + ++ V N M+ +C A S+F + P+ TY +L
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 413 AYTK 416
+ K
Sbjct: 528 GFFK 531
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 139/325 (42%), Gaps = 55/325 (16%)
Query: 104 EVFRW---MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
E FR M+K R D YS LI+ + K+ + A LF EM G P+ ++ +L
Sbjct: 293 EGFRLKHQMEKSRTR-PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 161 ISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
I H HSR+ L K ++KM KG++ P+IV YN ++ F + G + ++
Sbjct: 352 I--HGHSRNGEIDLMKE--SYQKMLSKGLQ---PDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+ + PD TY ++D + + G + + M N + D + F+ L+ K+
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM---GYAPSFV 335
+ E+ + +LR+ KP T+ M+ + K K A+ FK + EM G+ PS V
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCK---KGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 336 THESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
T+ N +L+ C + AD L
Sbjct: 522 TY-----------------------------------NVLLNGLCKLGQMKNADMLLDAM 546
Query: 396 RSIKVLPDASTYKLLYKAYTK-ANS 419
+I V+PD TY L + + + ANS
Sbjct: 547 LNIGVVPDDITYNTLLEGHHRHANS 571
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 141/316 (44%), Gaps = 10/316 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++ FR +K R+ + G L+ M K T + E+ + G + V+N L++
Sbjct: 190 IQCFRLSRKHRFDVPIRGC-GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMN 248
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
K ++ A F+++ +P +V++N ++ + + G +++ L +++
Sbjct: 249 KFC----KEGNISDAQKVFDEITK-RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
S PD++TY+ +++A K + + M P+ + F LI + + + D
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
M++ ++ +L +P + +N++V + K A N+ M G P +T+ +LI
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI- 422
Query: 343 MYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
GFC V A E+ + ++ +++ +A++ C +A+ + +
Sbjct: 423 -DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 401 LPDASTYKLLYKAYTK 416
PD TY ++ A+ K
Sbjct: 482 KPDDVTYTMMMDAFCK 497
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L K +K +F M K R + ++ +++ LI + G+ L + +M +
Sbjct: 316 LINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G +PD +YN+L++ + D A G + G+ +P+ +TY ++ F + G
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR--GL---RPDKITYTTLIDGFCRGG 429
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
VE + K++D++ + D ++ ++ K G + + E L M KPD +T+
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+++D++ KK ++ K + PS+ T+N ++ K A+ + M +
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 329 GYAPSFVTHESLI 341
G P +T+ +L+
Sbjct: 550 GVVPDDITYNTLL 562
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 135/320 (42%), Gaps = 9/320 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
V++ L++ K+G A +F E+ +P +N+LI+ + K L +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC----KVGNLDEGFRL 297
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+M+ R +P++ TY+ ++ A + K++ + LF ++ + + P+ + ++ +
Sbjct: 298 KHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ G I M+ +M S +PD++ +N L++ + K + ++R +P
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFD 358
T+ +++ + + + A + K+M + G V +L+ G C V A+
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC--GMCKEGRVIDAERALR 474
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
++ + ++ T M+D +C Q L + +S +P TY +L K
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 419 SXXXXXXXXXXXXXXGIIPN 438
G++P+
Sbjct: 535 QMKNADMLLDAMLNIGVVPD 554
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 30/192 (15%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA----- 175
+Y+ L++ K G A + M G RPD Y +LI D AL
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 176 -------KALGYFEKMKGM---------ERC---------KPNIVTYNIILRAFAQAGKV 210
+G+ + GM ER KP+ VTY +++ AF + G
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
+ L K++ P + TYN +++ K G ++ + +L M + PD IT+N L
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 271 IDSYGKKQQFDK 282
++ + + K
Sbjct: 562 LEGHHRHANSSK 573
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 136/298 (45%), Gaps = 10/298 (3%)
Query: 106 FRW----MQKQRWY--MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNS 159
F W +++Q Y M+ G +++I++ G+ G A +F EM C+ +N+
Sbjct: 87 FEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
Query: 160 LISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
L++A ++S K G F+++ G +P++ +YN +++ G + +L +
Sbjct: 147 LLNACVNS----KKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQ 279
++ + PD T+N ++ +G E E + RM K D+ ++N + + +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 280 FDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
++M +F L ++ KP + TF +M+ + D+A +K++ + G P S
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 340 LIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
L+ + A EL + ++ + + L ++D + EA+ + + A++
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKT 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV---MD 237
F+K E + NI Y +R A A K E V + L+E P++ V ++
Sbjct: 58 FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEI---LEEQNKYPNMSKEGFVARIIN 114
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL-RSKEK 296
YG+ GM + + M CK ++FN L+++ ++FD +E +FK L + +
Sbjct: 115 LYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIE 174
Query: 297 PSLPTFNSMVLNY-GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
P + ++N+++ GK + A + ++ G P +T L++ + ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTE-AVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
++ +VE V+ + + NA L + N +E SLF + + ++ PD T+ + K +
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
+ G+ + L +M G R YN+LI+ H K L + + M G
Sbjct: 250 RSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE-----KGLLSSALKLKNMMGKSGL 304
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
+PN+VT+N ++ F +A K+++ + +F ++ V+P+ TYN +++ Y ++G
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
M N + D++T+N LI K+ + K Q K L + P+ TF+++++
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+ D+ ++K M G P+ T L+ FC E FDG
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLV--SAFC-----RNEDFDG 466
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
GK DK + L+ + + A + Y+ LI+ +KG A+ L + M +G +P+
Sbjct: 252 GKLDKGIELLQDMERL----GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 154 TSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
+N+LI H + L +A F +MK + PN VTYN ++ ++Q G E
Sbjct: 308 VVTFNTLI----HGFCRAMKLQEASKVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMA 362
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
++D+ + + DI TYN ++ K+ R+ + + P+ TF+ LI
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
++ D+ +++KS++RS P+ TFN +V + + D A V ++M
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
C V++SL H K A F +MK P + + N + + G+
Sbjct: 164 CDSTPRVFDSLFKTFAH----LKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGR 218
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
V+ ++++ +SP+ YT N VM Y + G + + +L M+ + +++N
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LI + +K ++ + +S +P++ TFN+++ + +A +A VF +M +
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
AP+ VT+ +LI Y A ++ +V + +Q + T NA++ C ++A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 390 SLFQRARSIKVLPDASTYKLL 410
+ ++P++ST+ L
Sbjct: 399 QFVKELDKENLVPNSSTFSAL 419
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
+ G+ + L +M G R YN+LI+ H K L + + M G
Sbjct: 250 RSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE-----KGLLSSALKLKNMMGKSGL 304
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
+PN+VT+N ++ F +A K+++ + +F ++ V+P+ TYN +++ Y ++G
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
M N + D++T+N LI K+ + K Q K L + P+ TF+++++
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
+ D+ ++K M G P+ T L+ FC E FDG
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLV--SAFC-----RNEDFDG 466
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
GK DK + L+ + + A + Y+ LI+ +KG A+ L + M +G +P+
Sbjct: 252 GKLDKGIELLQDMERL----GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 154 TSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
+N+LI H + L +A F +MK + PN VTYN ++ ++Q G E
Sbjct: 308 VVTFNTLI----HGFCRAMKLQEASKVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMA 362
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
++D+ + + DI TYN ++ K+ R+ + + P+ TF+ LI
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
++ D+ +++KS++RS P+ TFN +V + + D A V ++M
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
C V++SL H K A F +MK P + + N + + G+
Sbjct: 164 CDSTPRVFDSLFKTFAH----LKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGR 218
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
V+ ++++ +SP+ YT N VM Y + G + + +L M+ + +++N
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LI + +K ++ + +S +P++ TFN+++ + +A +A VF +M +
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
AP+ VT+ +LI Y A ++ +V + +Q + T NA++ C ++A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 390 SLFQRARSIKVLPDASTYKLL 410
+ ++P++ST+ L
Sbjct: 399 QFVKELDKENLVPNSSTFSAL 419
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 145/338 (42%), Gaps = 12/338 (3%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
V R +Q + AD +Y+ LIS K G+ +F +M N+G + + +LI
Sbjct: 489 VLRLVQ-ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGC 547
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL--DE 222
+ +AKA G + ++ + KP+ V +N ++ A Q+G V++ + ++ +
Sbjct: 548 A----RAGQVAKAFGAYGILRS-KNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ PD + +M A G + + + + + + + ++S K +D
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++K + P F++++ G A++ D+A + + G +++ SL
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL-- 720
Query: 343 MYGFCDCVS--KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
M C+ KA EL++ + K++ +ST+NA++ C N +A +++ +
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P+ TY +L A + + G+ PN
Sbjct: 781 KPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P + T+N+++ A + +E + + + ES ++ D Y ++ + K G + M +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYG 310
+M ++ + +L TF LID + Q K + +LRSK KP FN+++ G
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY-GILRSKNVKPDRVVFNALISACG 583
Query: 311 KARLKDKAENVFKQMTEMGYA--PSFVTHESLIYMYGFCDC--VSKAKELF 357
++ D+A +V +M + P ++ +L M C+ V +AKE++
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGAL--MKACCNAGQVERAKEVY 632
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 95 KHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDT 154
K W +++ M K++ D +S LI V G A + + ++ G R T
Sbjct: 656 KSGDWDFACSIYKDM-KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGT 714
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
Y+SL+ A +++D KAL +EK+K + + +P I T N ++ A + ++ +
Sbjct: 715 ISYSSLMGACCNAKD----WKKALELYEKIKSI-KLRPTISTMNALITALCEGNQLPKAM 769
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
++ + P+ TY+ +M A ++ +L++ K + P+LI
Sbjct: 770 EYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%)
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
K++++A+ F M P++ YN I+ ++A GK E+ + E+ + P T
Sbjct: 145 KSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITET 204
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
Y+G+++AYGK M E+ L RM+S+ C D +T+NLLI + + +MEQ+++SL+
Sbjct: 205 YDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLM 264
Query: 292 RSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
K T SM+ Y + L +K E ++ G +
Sbjct: 265 SRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGIS 304
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 200 ILRAFAQAGKVEQVNSLF---KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
++R Q+ ++ ++ +F K+L+ S +S + Y + ++ M + A + +
Sbjct: 101 VIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYE-RIIRFLCEEKSMSEAIRAFRSMID 159
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP---TFNSMVLNYGKAR 313
++ P L +N +I SY +F E+ L KE LP T++ ++ YGK +
Sbjct: 160 DHELSPSLEIYNSIIHSYADDGKF---EEAMFYLNHMKENGLLPITETYDGLIEAYGKWK 216
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+ D+ K+M G VT+ LI + + + ++++ L+ K+ ++ STL
Sbjct: 217 MYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLL 276
Query: 374 AMLDVYC 380
+ML+ Y
Sbjct: 277 SMLEAYA 283
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF--------EKMKGMER 189
A+ + ++R+ G S N+LI+ R + F E K + +
Sbjct: 181 AVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGK 240
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI-VSPDIYTYNGVMDAYGKRGMIREM 248
KPN T+N ++ +F + G+ E V ++++++E + SP++Y+YN +M+AY RG++ E
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
E + MK D++ +N +I + K +++F+ + + + T+ +V
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
Y KA D V+++M G+ +T E+L+ G CD
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALV--EGLCD 398
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 131 KKGQTRLAMWLFSEMRN-TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER 189
++G+T + ++ EM GC P+ YN L+ A+ +++A +E+MK +
Sbjct: 257 REGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYC----ARGLMSEAEKVWEEMK-VRG 311
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
+IV YN ++ +V + LF+D+ + TY +++ Y K G +
Sbjct: 312 VVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGL 371
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKK---QQFDKMEQVFKSLLRSKE-KPSLPTFNSM 305
+ MK + D +T L++ Q+ + + K +R PS + +
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELL 431
Query: 306 VLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
V + D+A N+ +M G+ PS T+ + I YG
Sbjct: 432 VKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGI 472
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 127/294 (43%), Gaps = 40/294 (13%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA------ 175
+S++ + L +LF+ R + C DT ++LI H+ SR + K+ A
Sbjct: 74 FSEITLCLRNNPHLSLRFFLFTR-RYSLCSHDTHSCSTLI--HILSRSRLKSHASEIIRL 130
Query: 176 ------------KALGYFEKM-KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ L F + K RC +++++++ + +++ + + L
Sbjct: 131 ALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRS 190
Query: 223 SIVSPDIYTYNGVMDAYGKR-------GMIREMEAM------LTRMKSNQCKPDLITFNL 269
++ I T N ++ +R M RE+ + + + KP+ TFN
Sbjct: 191 RGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNS 250
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
++ S+ ++ + + +E++++ + P++ ++N ++ Y L +AE V+++M
Sbjct: 251 MMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVR 310
Query: 329 GYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
G V + ++I G C V KAKELF + ++ T +++ YC
Sbjct: 311 GVVYDIVAYNTMIG--GLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 14/317 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
++VF M K+R + + + S ++ + G A LF E R T D YN
Sbjct: 346 VDVFNKMLKKRKRI-NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
A K + +A+ F +M G + P+++ Y ++ GK L ++D
Sbjct: 405 A----LGKLGKVEEAIELFREMTG-KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDG 459
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ +PDI YN + G+ +E L M++ KP +T N++I+ + DK
Sbjct: 460 TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDK 519
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA-PSFVTHESLI 341
E ++SL E S SMV + A D A F++ + + P V
Sbjct: 520 AEAFYESL----EHKSRENDASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFT 572
Query: 342 YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+ D +SKA++L D + + V+ + S ++ +C N ++A F+ + K++
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 402 PDASTYKLLYKAYTKAN 418
PD TY ++ Y + N
Sbjct: 633 PDLFTYTIMINTYCRLN 649
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 48/328 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ S+ +K A L M G P+ S+Y LI A + + KA +F
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC----RVNNVRKAREFF 623
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E + ++ P++ TY I++ + + + +Q +LF+D+ V PD+ TY+ ++++ +
Sbjct: 624 EILV-TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
M REMEA PD++ + ++I+ Y K+ +FK + R + P + T
Sbjct: 683 LDMKREMEAF-------DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT 735
Query: 302 FNSMVLNYGKARLK----------------------------DKAENVFKQMTEMGYAPS 333
+ ++ N + L +A+ +F QM E G P
Sbjct: 736 YTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 334 FVTHESLIYMYGFCDC----VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
+ +LI C C + +AK +FD ++ES V+ V A++ C N +A
Sbjct: 796 AAPYTALIA----CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 390 SLFQRARSIKVLPDASTYKLLYKAYTKA 417
L + + P ++ ++ A KA
Sbjct: 852 KLVKEMLEKGIKPTKASLSAVHYAKLKA 879
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 137/354 (38%), Gaps = 39/354 (11%)
Query: 117 ADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
+D G+ Y K++ + + + A + +M G PD VY+++I H K +
Sbjct: 288 SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGH----RKNMNIP 343
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
KA+ F KM +R + N V + IL+ + Q G + LFK+ E+ +S D YN
Sbjct: 344 KAVDVFNKMLK-KRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVA 402
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
DA GK G + E + M PD+I + LI + + + + + +
Sbjct: 403 FDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK 462
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKA 353
P + +N + L +A K M G P++VTH +I G D + KA
Sbjct: 463 TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI--EGLIDAGELDKA 520
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINN-----------LPQ---------------- 386
+ ++ L + S + C+++ LP+
Sbjct: 521 EAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY 580
Query: 387 --EADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+A L R + V P+ S Y L A+ + N+ I+P+
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 147/356 (41%), Gaps = 50/356 (14%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F+ LGK K +E+FR M + D Y+ LI +G+ A L EM TG
Sbjct: 403 FDALGKLGKVEEAIELFREMTG-KGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRAFAQA 207
PD +YN L T LA+ FE +K ME KP VT+N+++ A
Sbjct: 462 KTPDIVIYNVLAGGL-----ATNGLAQEA--FETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 208 GKVEQVNSLFKDL-------DESIVSPDIYTYNGVMDAYGKRGM---------------- 244
G++++ + ++ L D S+V + G +D +R +
Sbjct: 515 GELDKAEAFYESLEHKSRENDASMVKG--FCAAGCLDHAFERFIRLEFPLPKSVYFTLFT 572
Query: 245 --------IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
I + + +L RM +P+ + LI ++ + K + F+ L+ K
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P L T+ M+ Y + +A +F+ M P VT+ L+ D + + E
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD-MKREMEA 691
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
FD V V M++ YC N ++ +LF+ + +++PD TY +L K
Sbjct: 692 FD------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 123/316 (38%), Gaps = 45/316 (14%)
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQ 212
SVY +L ++ +D ++KA ++M G+E P Y ++ A+ + V +
Sbjct: 565 SVYFTLFTSLCAEKD---YISKAQDLLDRMWKLGVE---PEKSMYGKLIGAWCRVNNVRK 618
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
F+ L + PD++TY +++ Y + ++ A+ MK KPD++T+++L++
Sbjct: 619 AREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Query: 273 S----------------------------YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
S Y K+ +FK + R + P + T+
Sbjct: 679 SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 305 MVLNYGKARLKDKAE-NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
+ LK+K E N+ ++M P + LI + +AK +FD ++ES
Sbjct: 739 L--------LKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES 790
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXX 423
V + A++ C +EA +F R V PD Y L +
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 424 XXXXXXXXXXGIIPNK 439
GI P K
Sbjct: 851 VKLVKEMLEKGIKPTK 866
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 38/293 (12%)
Query: 52 ETRELVRLLTRK--ISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWM 109
+ RE +L K + D +N Y RL + + LFE++
Sbjct: 618 KAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM---------------- 661
Query: 110 QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
K+R D YS L++ + R EM PD Y +I+ + H D
Sbjct: 662 -KRRDVKPDVVTYSVLLNSDPELDMKR-------EMEAFDVIPDVVYYTIMINRYCHLND 713
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
L K F+ MK E P++VTY ++L+ K E+ +L +++ V PD+
Sbjct: 714 ----LKKVYALFKDMKRRE-IVPDVVTYTVLLK-----NKPER--NLSREMKAFDVKPDV 761
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+ Y ++D K G + E + + +M + PD + LI K + + +F
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++ S KP + + +++ + KA + K+M E G P+ + ++ Y
Sbjct: 822 MIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHY 874
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 12/255 (4%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+I N ++ +G+ + V F +++ + D +TY V+ A + E+E +
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKL 239
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
L+R+ ++ + + + I+ Q D + + L ++ L + + + Y K
Sbjct: 240 LSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPL---RDANILVDKSDLGIAYRK 296
Query: 312 A--------RLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
R++D AE+V M + G P + ++I + + KA ++F+ +++
Sbjct: 297 VVRGLCYEMRIED-AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXX 423
+ +I ++++L YC EA LF+ R + D Y + + A K
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Query: 424 XXXXXXXXXXGIIPN 438
GI P+
Sbjct: 416 IELFREMTGKGIAPD 430
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 128 VMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM 187
++ +G + A LF R G P+T YN L+ A + D L+ A F KM +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDD----LSIAYQLFGKM--L 217
Query: 188 ER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIR 246
ER P++ +Y I+++ F + G+V L D+ PD +Y ++++ ++ +R
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 247 EMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV 306
E +L RMK C PDL+ +N +I + ++ + +V +L + P+ ++ +++
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 307 LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
+ D+ + ++M G++P F L+ GFC
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV--KGFC 376
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A ++++M + G +PD +N ++ L SR K+ A+ F MK C PN+ +Y
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK----LFHVMKSKGPC-PNVRSY 371
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++R F + +E F D+ +S + PD Y ++ +G + + + +L M+
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD T+N LI ++ + +++ +++++ +PS+ TFN ++ +Y AR +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 318 AENVFKQMTEMGYAPSFVTHESLI 341
V+++M + G P ++ LI
Sbjct: 492 GRAVWEEMIKKGICPDDNSYTVLI 515
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 140/338 (41%), Gaps = 7/338 (2%)
Query: 101 PCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
P F W +++ + D+ Y+ ++S++ K Q + + EM G +
Sbjct: 177 PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMET 231
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+ + + K KA+G FE MK + K + T N +L + +A ++ LF L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E +P++ TY +++ + + + E + M KPD++ N++++ + ++
Sbjct: 291 KERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
++F + P++ ++ M+ ++ K + A F M + G P + L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I +G + EL + E T NA++ + +P+ A ++ + ++
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P T+ ++ K+Y A + GI P+
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D VY+ LI+ G + + L EM+ G PD YN+LI + K A
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ----KMPEHA 457
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ KM E +P+I T+N+I++++ A E ++++++ + + PD +Y ++
Sbjct: 458 TRIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIR 516
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY---GKKQQFDKMEQ 285
G RE L M K LI +N + G+ + F+++ Q
Sbjct: 517 GLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 139/299 (46%), Gaps = 9/299 (3%)
Query: 117 ADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
A N V Y+ LI + G+ A + S M+ +P+ N+++ + L
Sbjct: 403 APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC----RHHGLN 458
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
A+ +F M+ E K N+VTY ++ A VE+ ++ + E+ SPD Y +
Sbjct: 459 MAVVFFMDMEK-EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ + + ++ ++K DL+ +N+LI + K +K+ ++ + + +
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
KP T+N+++ +GK + + E + +QM E G P+ T+ ++I Y + +A +
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 356 LF-DGLVESKVQIKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
LF D + SKV N +++ + + N Q A SL + + V P+ TY L+K
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ-ALSLKEEMKMKMVRPNVETYNALFK 695
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 135/334 (40%), Gaps = 46/334 (13%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRN------TGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
LI+ + K + A+ +F +MR + D+ +N+LI K L +A
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC----KVGRLKEAE 390
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+MK ERC PN VTYN ++ + +AGK+E + + E + P++ T N ++
Sbjct: 391 ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ + M+ K +++T+ LI + +K ++ +L + P
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 299 LPTFNSMVLNYGKARL--------------------------------KDKAENVFKQMT 326
+ +++ + R K+ E V++ +T
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 327 EM---GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M G P +T+ +LI +G + + + + E + V+T A++D YC
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 384 LPQEADSLFQ-RARSIKVLPDASTYKLLYKAYTK 416
EA LF+ KV P+ Y +L A++K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 14/303 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L+S +G+ L +M RPD LI+ SR + +AL F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR----RVDEALEVF 352
Query: 182 EKMKGMERCKPNIVT-----YNIILRAFAQAGKVEQVNSLFKDLD-ESIVSPDIYTYNGV 235
EKM+G N++ +N ++ + G++++ L + E +P+ TYN +
Sbjct: 353 EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCL 412
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+D Y + G + + +++RMK ++ KP+++T N ++ + + F + +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV--SKA 353
K ++ T+ +++ +KA +++M E G +P + +LI G C A
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS--GLCQVRRDHDA 530
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+ + L E + + N ++ ++C N ++ + PD+ TY L
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 414 YTK 416
+ K
Sbjct: 591 FGK 593
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ Y+ LIS GK + +MR G P + Y ++I A+ L +A
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC----SVGELDEA 635
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L F+ M + PN V YNI++ AF++ G Q SL +++ +V P++ TYN +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK--SLLRSKE 295
++ + ++ M C+P+ IT +L++ + K+ + + S+ E
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTE 755
Query: 296 KPS 298
K S
Sbjct: 756 KAS 758
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 37/272 (13%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR---DKTKALAKA- 177
Y LI AM+ + +M GC PD +Y +LIS R D + + K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 178 --------LGY----------------FEKMKGMER--CKPNIVTYNIILRAFAQAGKVE 211
L Y +E + ME+ KP+ +TYN ++ F + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK-SNQCKPDLITFNLL 270
V + + + E + P + TY V+DAY G + E + M ++ P+ + +N+L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-- 328
I+++ K F + + + + +P++ T+N++ + K + E + K M EM
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLNEKTQGETLLKLMDEMVE 715
Query: 329 -GYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
P+ +T E L+ D + K ++ G
Sbjct: 716 QSCEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+ + D Y+ LI + K T + ++M G +PD+ YN+LIS K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF----GK 593
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD-ESIVSPDI 229
K E+M+ + P + TY ++ A+ G++++ LFKD+ S V+P+
Sbjct: 594 HKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
YN +++A+ K G + ++ MK +P++ T+N L +K Q + + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 290 LLRSKEKPSLPTF 302
++ +P+ T
Sbjct: 713 MVEQSCEPNQITM 725
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 9/230 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN V + + + + + DL ++ + +N ++ G+ I M +
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-------KPSLPTFNS 304
+ +M + +PD++T +LI++ K ++ D+ +VF+ +R K K FN+
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK-MRGKRTDDGNVIKADSIHFNT 375
Query: 305 MVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
++ K RLK+ E + + E AP+ VT+ LI Y + AKE+ + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+++ V T+N ++ C ++ A F V + TY L A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 136/293 (46%), Gaps = 8/293 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI + G+ A + S M+ +P+ N+++ + L A+ +F
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC----RHHGLNMAVVFF 464
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ E K N+VTY ++ A VE+ ++ + E+ SPD Y ++ +
Sbjct: 465 MDMEK-EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ ++ ++K DL+ +N+LI + K +K+ ++ + + +KP T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF-DGL 360
+N+++ +GK + + E + +QM E G P+ T+ ++I Y + +A +LF D
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 361 VESKVQIKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
+ SKV N +++ + + N Q A SL + + V P+ TY L+K
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQ-ALSLKEEMKMKMVRPNVETYNALFK 695
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 46/334 (13%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRN------TGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
LI+ + K + A+ +F +MR + D+ +N+LI K L +A
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC----KVGRLKEAE 390
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+MK ERC PN VTYN ++ + +AGK+E + + E + P++ T N ++
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ + M+ K +++T+ LI + +K ++ +L + P
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 299 LPTFNSMVLNYGKARL--------------------------------KDKAENVFKQMT 326
+ +++ + R K+ AE V++ +T
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 327 EM---GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M G P +T+ +LI +G + + + + E + V+T A++D YC
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 384 LPQEADSLFQ-RARSIKVLPDASTYKLLYKAYTK 416
EA LF+ KV P+ Y +L A++K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 132/304 (43%), Gaps = 16/304 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L+S +G+ L +M RPD LI+ SR + +AL F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR----RVDEALEVF 352
Query: 182 EKMKGMERCKPNIVT-----YNIILRAFAQAGKVEQVNSLF--KDLDESIVSPDIYTYNG 234
E+M+G N++ +N ++ + G++++ L L+E V P+ TYN
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNC 411
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D Y + G + + +++RMK ++ KP+++T N ++ + + F + +
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV--SK 352
K ++ T+ +++ +KA +++M E G +P + +LI G C
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS--GLCQVRRDHD 529
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A + + L E + + N ++ ++C N ++ + PD+ TY L
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 413 AYTK 416
+ K
Sbjct: 590 FFGK 593
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+ + D Y+ LI + K + ++M G +PD+ YN+LIS K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF----GK 593
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD-ESIVSPDI 229
K E+M+ + P + TY ++ A+ G++++ LFKD+ S V+P+
Sbjct: 594 HKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
YN +++A+ K G + ++ MK +P++ T+N L +K Q + + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 290 LL 291
++
Sbjct: 713 MV 714
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN V + + + + + DL ++ + +N ++ G+ I M +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-------KPSLPTFNS 304
+ +M + +PD++T +LI++ K ++ D+ +VF+ +R K K FN+
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ-MRGKRTDDGNVIKADSIHFNT 375
Query: 305 MVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
++ K RLK+ E + + E P+ VT+ LI Y + AKE+ + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+++ V T+N ++ C ++ A F V + TY L A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 149/330 (45%), Gaps = 8/330 (2%)
Query: 85 HCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
H L + L K + E+ M+ + + + Y+ LI + G+ A + S
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M+ +P+ N+++ + L A+ +F M+ E K N+VTY ++ A
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMC----RHHGLNMAVVFFMDMEK-EGVKGNVVTYMTLIHAC 486
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
VE+ ++ + E+ SPD Y ++ + + ++ ++K DL
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+ +N+LI + K +K+ ++ + + +KP T+N+++ +GK + + E + +Q
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF-DGLVESKVQIKVSTLNAMLDVYC-IN 382
M E G P+ T+ ++I Y + +A +LF D + SKV N +++ + +
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYK 412
N Q A SL + + V P+ TY L+K
Sbjct: 667 NFGQ-ALSLKEEMKMKMVRPNVETYNALFK 695
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 46/334 (13%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRN------TGCRPDTSVYNSLISAHLHSRDKTKALAKAL 178
LI+ + K + A+ +F +MR + D+ +N+LI K L +A
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC----KVGRLKEAE 390
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
+MK ERC PN VTYN ++ + +AGK+E + + E + P++ T N ++
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ + M+ K +++T+ LI + +K ++ +L + P
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 299 LPTFNSMVLNYGKARL--------------------------------KDKAENVFKQMT 326
+ +++ + R K+ AE V++ +T
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 327 EM---GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
+M G P +T+ +LI +G + + + + E + V+T A++D YC
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 384 LPQEADSLFQ-RARSIKVLPDASTYKLLYKAYTK 416
EA LF+ KV P+ Y +L A++K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 132/304 (43%), Gaps = 16/304 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ L+S +G+ L +M RPD LI+ SR + +AL F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSR----RVDEALEVF 352
Query: 182 EKMKGMERCKPNIVT-----YNIILRAFAQAGKVEQVNSLF--KDLDESIVSPDIYTYNG 234
E+M+G N++ +N ++ + G++++ L L+E V P+ TYN
Sbjct: 353 EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNC 411
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++D Y + G + + +++RMK ++ KP+++T N ++ + + F + +
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV--SK 352
K ++ T+ +++ +KA +++M E G +P + +LI G C
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS--GLCQVRRDHD 529
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A + + L E + + N ++ ++C N ++ + PD+ TY L
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 413 AYTK 416
+ K
Sbjct: 590 FFGK 593
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ Y+ LIS GK + +MR G P + Y ++I A+ L +A
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC----SVGELDEA 635
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L F+ M + PN V YNI++ AF++ G Q SL +++ +V P++ TYN +
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK--SLLRSKE 295
++ + ++ M C+P+ IT +L++ + K+ + + S+ E
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTE 755
Query: 296 KPS 298
K S
Sbjct: 756 KAS 758
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 37/272 (13%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR---DKTKALAKA- 177
Y LI AM+ + +M GC PD +Y +LIS R D + + K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 178 --------LGY----------------FEKMKGMER--CKPNIVTYNIILRAFAQAGKVE 211
L Y +E + ME+ KP+ +TYN ++ F + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK-SNQCKPDLITFNLL 270
V + + + E + P + TY V+DAY G + E + M ++ P+ + +N+L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-- 328
I+++ K F + + + + +P++ T+N++ + K + E + K M EM
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLNEKTQGETLLKLMDEMVE 715
Query: 329 -GYAPSFVTHESLIYMYGFCDCVSKAKELFDG 359
P+ +T E L+ D + K ++ G
Sbjct: 716 QSCEPNQITMEILMERLSGSDELVKLRKFMQG 747
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K+ + D Y+ LI + K + ++M G +PD+ YN+LIS K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF----GK 593
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD-ESIVSPDI 229
K E+M+ + P + TY ++ A+ G++++ LFKD+ S V+P+
Sbjct: 594 HKDFESVERMMEQMRE-DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
YN +++A+ K G + ++ MK +P++ T+N L +K Q + + ++
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 290 LLRSKEKPSLPTF 302
++ +P+ T
Sbjct: 713 MVEQSCEPNQITM 725
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN V + + + + + DL ++ + +N ++ G+ I M +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-------KPSLPTFNS 304
+ +M + +PD++T +LI++ K ++ D+ +VF+ +R K K FN+
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ-MRGKRTDDGNVIKADSIHFNT 375
Query: 305 MVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
++ K RLK+ E + + E P+ VT+ LI Y + AKE+ + E
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+++ V T+N ++ C ++ A F V + TY L A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH--LHSRDKTKALAKALGYFE 182
L S++G K Q +L W++ +M G PD YN L+ + L D+ L F+
Sbjct: 226 LNSLLGVK-QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL------FD 278
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
+M + P+ TYNI+L + K + + E + P + Y ++D +
Sbjct: 279 EM-ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRA 337
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G + + L M C+PD++ + ++I Y + DK +++F+ + + P++ T+
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
NSM+ A +A + K+M G P+FV + +L+
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 37/293 (12%)
Query: 65 SDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV--- 121
++E T+N Y L++ +F E G++ K W + D V
Sbjct: 140 GEQECFRHTVNSYHLLMK------IFAECGEY--------------KAMWRLVDEMVQDG 179
Query: 122 -------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
++ LI G+ G + A+ F + + RP YN+++++ L +
Sbjct: 180 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQ----- 234
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
K + + K + P+++TYNI+L + GK+++ + LF ++ SPD YTYN
Sbjct: 235 YKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI 294
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ GK L MK P ++ + LID + + + ++++
Sbjct: 295 LLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 354
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
+P + + M+ Y + DKA+ +F++MT G P+ T+ S+I G C
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI--RGLC 405
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 7/313 (2%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMW-LFSEMRNTGCRPDTSVYNSLISAH 164
F W +Q + Y L+ + + G+ + AMW L EM G +N LI
Sbjct: 136 FLWSGEQECFRHTVNSYHLLMKIFAECGEYK-AMWRLVDEMVQDGFPTTARTFNLLIC-- 192
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
S + +A+ F K K +P +YN IL + + + + ++K + E
Sbjct: 193 --SCGEAGLAKQAVVQFMKSKTFNY-RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
SPD+ TYN ++ + G + + + M + PD T+N+L+ GK +
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
+ PS+ + +++ +A + + +M + G P V + +I Y
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDA 404
+ KAKE+F + V T N+M+ C+ +EA L + S P+
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 405 STYKLLYKAYTKA 417
Y L KA
Sbjct: 430 VVYSTLVSYLRKA 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ Y+ L+ ++GK + A+ + M+ G P Y +LI + + +A
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN-----LEA 342
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
YF C+P++V Y +++ + +G++++ +F+++ P+++TYN ++
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
G RE +L M+S C P+ + ++ L+ K + + +V + +++
Sbjct: 403 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 100/243 (41%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
T+N+++ + +AG +Q F P ++YN ++++ + +E + +M
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+ PD++T+N+L+ + + + D+ +++F + R P T+N ++ GK
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
A M E+G PS + + +LI + K D +V++ + V M
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGI 435
+ Y ++ +A +F+ LP+ TY + + A G
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC 425
Query: 436 IPN 438
PN
Sbjct: 426 NPN 428
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
LF EM G PD+ YN L LH K AL MK + P+++ Y +
Sbjct: 276 LFDEMARDGFSPDSYTYNIL----LHILGKGNKPLAALTTLNHMKEVG-IDPSVLHYTTL 330
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ ++AG +E ++ ++ PD+ Y ++ Y G + + + M M
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
P++ T+N +I +F + + K + P+ ++++V KA +A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 321 VFKQMTEMGYAPSFV 335
V ++M + G+ V
Sbjct: 451 VIREMVKKGHYVHLV 465
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
RP S + L+S + D + + + G+E P+ VT +I +R+ + G+V
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLE---PDQVTTDIAVRSLCETGRV 175
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN-QCKPDLITFNL 269
++ L K+L E PD YTYN ++ K + + + M+ + KPDL++F +
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LID+ + + + L + KP +N+++ + +A V+K+M E G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
P +T+ +LI+ V +A+ +V++ + +T ++++ C A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 390 SLFQRARSIKVLPDASTYKLLYKAYTKA 417
SL + + P+ TY L KA
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 116 MADNGVYSKLISV------MGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M +NG+ ++ + + G+ A L E+ PDT YN L+ HL
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK-HLC--- 205
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K K L + ++M+ KP++V++ I++ + + + L L + PD
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+ YN +M + E + +MK +PD IT+N LI K + ++ K+
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
++ + +P T+ S++ + A ++ ++M G AP+ T+ +L ++G C
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL--LHGLCKA 383
Query: 350 --VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
+ K EL++ + S V+++ + ++ + EA +F A K L DAS Y
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
Query: 408 KLL 410
L
Sbjct: 444 STL 446
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y D Y+ L++ M +KG++ A+ L EM GC P+ YN+L LH K + +
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL----LHGLCKARLM 386
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF 217
K + +E MK K Y ++R+ ++GKV + +F
Sbjct: 387 DKGMELYEMMKS-SGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 132 KGQTRL-----AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM-- 184
KG TR A + MR G PD + YNSLIS K L + L F++M
Sbjct: 56 KGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG----AAKNLMLNRVLQLFDEMLH 111
Query: 185 KGMERCKPNIVTYNIILRAFAQAGK-VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG 243
G+ P++ +YN ++ + + G+ E L +D+ + + P I TYN ++DA K G
Sbjct: 112 SGLS---PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
+ +KS + KP+L+T+N+LI+ K ++ ++ + + L +S P+ T+
Sbjct: 169 HTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
+M+ Y K + +K +F +M + GY + +++ +A E LV S
Sbjct: 228 TMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS 287
Query: 364 KVQIK-VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + + + N +L++Y + D L + + PD T+ ++
Sbjct: 288 GTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 192 PNIVT--YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
P I T NI + + + +E+ +L D V PD+ TYN ++ Y + I E
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
A+ RM+ +PD+ T+N LI K +++ Q+F +L S P + ++N+++ Y
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 310 GKARLKDKAENVFKQMTEM-GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK 368
K +A + + + G P T+ L+ A ELF L +S+V+ +
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPE 187
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+ T N +++ C + D + + + P+A TY + K Y K
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFK 235
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 41/311 (13%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LIS K + LF EM ++G PD YN+L+S + K +A
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF----KLGRHGEA 137
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + P I TYNI+L A ++G + LFK L +S V P++ TYN +++
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILIN 196
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF---------- 287
K + ++ M+ +K + P+ +T+ ++ Y K ++ +K Q+F
Sbjct: 197 GLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 288 -------------------------KSLLRSKEKP-SLPTFNSMVLNYGKARLKDKAENV 321
L+RS + + ++N+++ Y K D +++
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
+++ G P TH ++ A++ + E +Q V T N ++D C
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK 376
Query: 382 NNLPQEADSLF 392
A LF
Sbjct: 377 AGHVDRAMRLF 387
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P+++TYN +++ + + +++ ++ + + E+ + PD+ TYN ++ K M+ + +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 252 LTRMKSNQCKPDLI------------------------------------TFNLLIDSYG 275
M + PD+ T+N+L+D+
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 276 KKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
K D ++FK L+S+ KP L T+N ++ K+R + + +++ + GY P+ V
Sbjct: 166 KSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 336 THESLIYMYGFCDCVSKAKELF 357
T+ +++ MY + K +LF
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLF 246
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 39/204 (19%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LI+ + K + W+ E++ +G P+ Y +++ + KTK + K L F
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYF----KTKRIEKGLQLF 246
Query: 182 EKMK-------GMERC----------------------------KPNIVTYNIILRAFAQ 206
KMK G C +IV+YN +L + +
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
G ++ V+ L ++++ + PD YT+ +++ G E L + +P ++T
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSL 290
N LID K D+ ++F S+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASM 390
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 133/330 (40%), Gaps = 34/330 (10%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA--HLHSRDKTKALAKALG 179
++ LI K+G A + EM N G P TS YN I A D + L ++
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
P++V+YN ++ + + GK + + LF DL + P I TYN ++D
Sbjct: 371 -----------APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
+ G + + + M + PD+IT+ L+ + K +V+ +LR KP
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEM----GYAPSFVTHESLIYMYGFC------DC 349
+ + + G+ RL D ++ F+ EM +AP + + + G C
Sbjct: 480 YAYTTRAV--GELRLGD-SDKAFRLHEEMVATDHHAPDLTIYN--VRIDGLCKVGNLVKA 534
Query: 350 VSKAKELFD-GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
+ +++F GLV V T ++ Y N + A +L+ ++ P TY
Sbjct: 535 IEFQRKIFRVGLVPDHV-----TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 409 LLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+L + KA G+ PN
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 40/298 (13%)
Query: 176 KALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
K L FEKM KG P++ NI+L+ + + + +++++ + E + P + T+N
Sbjct: 186 KFLLSFEKMIRKGF---LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
++D+ K G + ++ + MK + +T+N+LI+ + K + ++ + + RS
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VS 351
+ +FN ++ Y K L D A V +M G P+ T+ IY+ CD +
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN--IYICALCDFGRID 360
Query: 352 KAKE-------------------------------LFDGLVESKVQIKVSTLNAMLDVYC 380
A+E LFD L + + T N ++D C
Sbjct: 361 DARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
+ + A L + + + PD TY L K + K + GI P+
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 4/220 (1%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ K G +A ++ EM G +PD Y + L D KA
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR----LH 502
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E+M + P++ YN+ + + G + + + + + PD TY V+ Y +
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + M + P +IT+ +LI + K + ++ Q + + +P++ T
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
N+++ KA D+A +M E G P+ ++ LI
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 51/336 (15%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ L+ K G+ A LF ++R P YN+LI S + L A
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN----LEGAQRLK 432
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKD---------------------- 219
E+M + P+++TY +++ F + G + ++ +
Sbjct: 433 EEMT-TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 220 ---------LDESIVS-----PDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLI 265
L E +V+ PD+ YN +D K G + + ++ PD +
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
T+ +I Y + QF ++ +LR + PS+ T+ VL YG A+ + E F+
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY--FVLIYGHAK-AGRLEQAFQYS 608
Query: 326 TEM---GYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
TEM G P+ +TH +L +YG C + +A + E + + ++ C
Sbjct: 609 TEMKKRGVRPNVMTHNAL--LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+E L++ ++ PD T++ L+K K
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 78 VRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRL 137
+RL ++ F L EE+ D P D +Y+ I + K G
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAP----------------DLTIYNVRIDGLCKVGNLVK 533
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ ++ G PD Y ++I +L + +A+ L Y E ++ +R P+++TY
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYL--ENGQFKMARNL-YDEMLR--KRLYPSVITY 588
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+++ A+AG++EQ ++ + V P++ T+N ++ K G I E L +M+
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
P+ ++ +LI ++++++ +++K +L + +P
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
+M G PD +SL++ S A+ A G EKM G++R ++V I++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVA-GQMEKM-GIKR---DVVVDTILIDT 57
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+ V + K + + +SP++ TY+ ++ K G + + E L M S + P+
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
+ITF+ LID+Y K+ + K++ V+K +++ P++ T++S++ D+A +
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 324 QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
M G P+ VT+ +L + V +L D + + V + N ++ Y
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLL 410
A +F S ++P+ +Y ++
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIV 264
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 135/315 (42%), Gaps = 40/315 (12%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+++ +M G + D V LI K + + AL ++MK PN+VTY
Sbjct: 32 AVYVAGQMEKMGIKRDVVVDTILIDTLC----KNRLVVPALEVLKRMKD-RGISPNVVTY 86
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA------- 250
+ ++ ++G++ ++D ++P++ T++ ++DAY KRG + ++++
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 251 ----------------------------MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
ML M S C P+++T++ L + + K + D
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
++ + + + + N+++ Y +A D A VF MT G P+ ++ ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 343 MYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
V KA F+ + +++ + + T M+ C + +EA LF + + +V P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 403 DASTYKLLYKAYTKA 417
D Y ++ +A
Sbjct: 327 DFKAYTIMIAELNRA 341
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 4/254 (1%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
+P+IVT + ++ F + ++ + +++ + D+ ++D K ++
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+L RMK P+++T++ LI K + E+ + K P++ TF++++ Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIK 368
K K ++V+K M +M P+ T+ SLI YG C + V +A ++ D ++
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI--YGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXX 428
V T + + + + ++ + L V + + L K Y +A
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 429 XXXXXGIIPNKRFF 442
G+IPN R +
Sbjct: 248 YMTSNGLIPNIRSY 261
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 39/288 (13%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
+L + L K+ +P LEV + M K R + YS LI+ + K G+ A EM +
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRM-KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM-------------------- 187
P+ +++LI A+ K L+K ++ M M
Sbjct: 112 KKINPNVITFSALIDAYA----KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN 167
Query: 188 --------------ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
+ C PN+VTY+ + F ++ +V+ L D+ + V+ + + N
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
++ Y + G I + M SN P++ ++N+++ + +K F+ + ++
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + T+ M+ KA + +A ++F ++ P F + +I
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+ PDI T + +++ + I++ + +M+ K D++ +LID+ K +
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKA-RLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+V K + P++ T++S++ K+ RL D AE +M P+ +T +LI
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD-AERRLHEMDSKKINPNVITFSALIDA 127
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
Y +SK ++ +++ + V T ++++ C++N EA + S P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 404 ASTYKLLYKAYTKAN 418
TY L + K++
Sbjct: 188 VVTYSTLANGFFKSS 202
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS LI + + A+ + M + GC P+ Y++L + K+ + +
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFF----KSSRVDDGIKLL 211
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ M N V+ N +++ + QAGK++ +F + + + P+I +YN V+
Sbjct: 212 DDMP-QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + + M+ + D+IT+ ++I K + +F L + +P
Sbjct: 271 NGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKA 330
Query: 302 FNSMVLNYGKARLKDKAE 319
+ M+ +A ++ +A+
Sbjct: 331 YTIMIAELNRAGMRTEAD 348
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 174/434 (40%), Gaps = 52/434 (11%)
Query: 46 TNDDDSETRELVRLLTRKISDKEPLERTLNKY-VRLVRTEHCFLLFEELGK--HDKWLPC 102
ND + + ++LT+ K +E LN+ V+L L EE+ K + +
Sbjct: 59 ANDASQDAERICKILTKFTDSK--VETLLNEASVKLSPA-----LIEEVLKKLSNAGVLA 111
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRL------------------------- 137
L VF+W + Q+ + Y+ LI +GK Q +L
Sbjct: 112 LSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRR 171
Query: 138 ---------AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGME 188
A+ F +M G + ++S +N + L + K++ + A F+KMK +
Sbjct: 172 YARARKVKEAIGAFHKMEEFGFKMESSDFNRM----LDTLSKSRNVGDAQKVFDKMKK-K 226
Query: 189 RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREM 248
R +P+I +Y I+L + Q + +V+ + +++ + PD+ Y +++A+ K E
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
M+ CKP F LI+ G +++ + + F+ S PT+N++V
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK 368
Y ++ + A +M G P+ T++ +++ + ++KE ++ +
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH---HLIRMQRSKEAYEVYQTMSCEPT 403
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXXX 428
VST M+ ++C A ++ + VLP + L A N
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 429 XXXXXGIIPNKRFF 442
GI P F
Sbjct: 464 EMLDVGIRPPGHMF 477
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 152/394 (38%), Gaps = 78/394 (19%)
Query: 97 DKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGK------------------------- 131
D W L + +W + + + + Y + ++GK
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTV 158
Query: 132 ---------KGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--------------------- 161
G+ A+ +F + G +T N L+
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 162 ----SAH-----LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
+AH +H K + +AL ++MKG +P +++Y I+R + Q + +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG-HGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
V + +++ + P+ TY +M + + E + TRMK + CKPD + +N LI
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSL------PTFNSMVLNYGKARLKDKAENVFKQMT 326
+ + + ++ E+VF+ E P L T+NSM+ Y +DKA + K+M
Sbjct: 338 TLARAGRLEEAERVFRV-----EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 327 EMGYA-PSFVTHESLI-YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
P T++ L+ + D V K L + + + + + ST ++ C N+
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ A LF+ S + P T LL + K N
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 148/335 (44%), Gaps = 23/335 (6%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
LGK KW E M+ + + +K++ G+ A+ +F + G
Sbjct: 131 LGKAKKWDRMKEFVERMRGDK--LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
+T N L L + K K + +A ++K PN T+NI + + +A +VE+
Sbjct: 189 NTESMNLL----LDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHGWCKANRVEE 242
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+++ P + +Y ++ Y ++ ++ ML+ M++N P+ IT+ ++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK-QMTEMGYA 331
S +++F++ +V + RS KP +N ++ +A ++AE VF+ +M E+G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKV-QIKVSTLNAML-------DVYCINN 383
+ T+ S+I MY D KA EL + S + V T +L DV +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
L +E + + D STY L + +AN
Sbjct: 423 LLKEMVTKHHLS------LDESTYTFLIQRLCRAN 451
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 152/394 (38%), Gaps = 78/394 (19%)
Query: 97 DKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGK------------------------- 131
D W L + +W + + + + Y + ++GK
Sbjct: 99 DDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTV 158
Query: 132 ---------KGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--------------------- 161
G+ A+ +F + G +T N L+
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 162 ----SAH-----LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
+AH +H K + +AL ++MKG +P +++Y I+R + Q + +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG-HGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
V + +++ + P+ TY +M + + E + TRMK + CKPD + +N LI
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSL------PTFNSMVLNYGKARLKDKAENVFKQMT 326
+ + + ++ E+VF+ E P L T+NSM+ Y +DKA + K+M
Sbjct: 338 TLARAGRLEEAERVFRV-----EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 327 EMGYA-PSFVTHESLI-YMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
P T++ L+ + D V K L + + + + + ST ++ C N+
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ A LF+ S + P T LL + K N
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 148/335 (44%), Gaps = 23/335 (6%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
LGK KW E M+ + + +K++ G+ A+ +F + G
Sbjct: 131 LGKAKKWDRMKEFVERMRGDK--LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
+T N L L + K K + +A ++K PN T+NI + + +A +VE+
Sbjct: 189 NTESMNLL----LDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHGWCKANRVEE 242
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+++ P + +Y ++ Y ++ ++ ML+ M++N P+ IT+ ++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK-QMTEMGYA 331
S +++F++ +V + RS KP +N ++ +A ++AE VF+ +M E+G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKV-QIKVSTLNAML-------DVYCINN 383
+ T+ S+I MY D KA EL + S + V T +L DV +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
L +E + + D STY L + +AN
Sbjct: 423 LLKEMVTKHHLS------LDESTYTFLIQRLCRAN 451
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 156/376 (41%), Gaps = 36/376 (9%)
Query: 73 TLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQ------------RWYMADN- 119
+L + +++ + ++ + G +W +++F WMQ+ ++ A N
Sbjct: 88 SLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVGAKNV 147
Query: 120 -----------------GVY--SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
VY + ++S + K G+ + LF +M+ G +PD YN+L
Sbjct: 148 SKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTL 207
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
++ + ++ + +G G++ + V Y +L A G+ E+ + + +
Sbjct: 208 LAGCIKVKNGYPKAIELIGELPH-NGIQM---DSVMYGTVLAICASNGRSEEAENFIQQM 263
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
SP+IY Y+ ++++Y +G ++ + ++T MKS P+ + L+ Y K F
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
D+ ++ L + + + ++ KA ++A ++F M G + +
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIM 383
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I +AKEL + + + LN ML YC + + ++ V
Sbjct: 384 ISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Query: 401 LPDASTYKLLYKAYTK 416
PD +T+ +L K + K
Sbjct: 444 SPDYNTFHILIKYFIK 459
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 15/272 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKAL- 178
YS L++ KG + A L +EM++ G P+ + +L+ ++ D+++ L L
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 179 --GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
GY E N + Y +++ ++AGK+E+ S+F D+ V D Y + ++
Sbjct: 335 SAGYAE----------NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
A + +E + + ++ K DL+ N ++ +Y + + + + ++ K +
Sbjct: 385 SALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P TF+ ++ + K +L A M G+ SLIY G ++A +
Sbjct: 445 PDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSV 504
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
++ L SK I +L + NL ++A
Sbjct: 505 YNMLRYSKRTICKELHEKILHILIQGNLLKDA 536
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 7/316 (2%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
C +V+ M + + + ++ L +V R +M G PD YN+L+
Sbjct: 220 CWQVYSVMCRVGIH-PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
S++ + K Y K+ R P++VTY +++ + G+V + + F +
Sbjct: 279 SSYCR-----RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ + PD +YN ++ AY K GM+++ + +L M N PD T ++++ + ++ +
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-GYAPSFVTHESL 340
L R K + ++++ + A+++ ++ E G+ T+ +L
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNL 453
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I CD + +A L L + T A++ C +EA+SL +V
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 401 LPDASTYKLLYKAYTK 416
PD+ L Y K
Sbjct: 514 KPDSFICGALVYGYCK 529
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 141/315 (44%), Gaps = 30/315 (9%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN-TGCRPDTSVYNSLISAH 164
F+W++ + G Y L+ ++ + LAM E+ T + + V+ L+SA
Sbjct: 100 FKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSA- 158
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
+ C + V ++++++ + + G VE+ +F+++ +S
Sbjct: 159 ----------------------TDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSG 196
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
S + T N +++ K ++ + + + M P+ TFN+L + + F +++
Sbjct: 197 FSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVD 256
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+ + +P L T+N++V +Y + RLK+ A ++K M P VT+ SLI
Sbjct: 257 DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE-AFYLYKIMYRRRVVPDLVTYTSLIK- 314
Query: 344 YGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
G C V +A + F +V+ ++ + N ++ YC + Q++ L V+
Sbjct: 315 -GLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 402 PDASTYKLLYKAYTK 416
PD T K++ + + +
Sbjct: 374 PDRFTCKVIVEGFVR 388
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A ++++M + G +PD +N ++ L S K+ A+ F MK C PN+ +Y
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK----LFHVMKSKGPC-PNVRSY 371
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++R F + +E F D+ +S + PD Y ++ +G + + + +L M+
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD T+N LI ++ + +++ +++++ +PS+ TFN ++ +Y AR +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 318 AENVFKQMTEMGYAPSFVTHESLI 341
V+ +M + G P ++ LI
Sbjct: 492 GRAVWDEMIKKGICPDDNSYTVLI 515
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/338 (18%), Positives = 138/338 (40%), Gaps = 7/338 (2%)
Query: 101 PCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
P F W +++ + + Y+ ++S++ K Q + + EM G +
Sbjct: 177 PAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMET 231
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+ + + K KA+G FE MK + K + T N +L + +A ++ LF L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E +P++ TY +++ + + + E + M + KPD++ N++++ + +
Sbjct: 291 KERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
++F + P++ ++ M+ ++ K + A F M + G P + L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I +G + EL + E T NA++ + +P+ ++ + ++
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P T+ ++ K+Y A + GI P+
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D VY+ LI+ G + + L EM+ G PD YN+LI L + K
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK--LMANQKMPEHGTR 459
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + KM E +P+I T+N+I++++ A E +++ ++ + + PD +Y ++
Sbjct: 460 I--YNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 516
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY---GKKQQFDKMEQ 285
G RE L M K LI +N + G+ + F+++ Q
Sbjct: 517 GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A ++++M + G +PD +N ++ L S K+ A+ F MK C PN+ +Y
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK----LFHVMKSKGPC-PNVRSY 370
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++R F + +E F D+ +S + PD Y ++ +G + + + +L M+
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
PD T+N LI ++ + +++ +++++ +PS+ TFN ++ +Y AR +
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 318 AENVFKQMTEMGYAPSFVTHESLI 341
V+ +M + G P ++ LI
Sbjct: 491 GRAVWDEMIKKGICPDDNSYTVLI 514
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 139/338 (41%), Gaps = 7/338 (2%)
Query: 101 PCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
P F W +++ + D+ Y+ ++S++ K Q + + EM G +
Sbjct: 176 PAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMET 230
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+ + + K KA+G FE MK + K + T N +L + +A ++ LF L
Sbjct: 231 FTIAMKAFAAAKERKKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
E +P++ TY +++ + + + E + M + KPD++ N++++ + +
Sbjct: 290 KERF-TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
++F + P++ ++ M+ ++ K + A F M + G P + L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
I +G + EL + E T NA++ + +P+ ++ + ++
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 401 LPDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
P T+ ++ K+Y A + GI P+
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D VY+ LI+ G + + L EM+ G PD YN+LI L + K
Sbjct: 401 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK--LMANQKMPEHGTR 458
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ + KM E +P+I T+N+I++++ A E +++ ++ + + PD +Y ++
Sbjct: 459 I--YNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 515
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY---GKKQQFDKMEQ 285
G RE L M K LI +N + G+ + F+++ Q
Sbjct: 516 GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 566
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 24/300 (8%)
Query: 119 NGVY------SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK 172
NG+Y +KL+S+ + G A +F P S N L L K
Sbjct: 63 NGLYQEHFFQTKLVSLFCRYGSVDEAARVF--------EPIDSKLNVLYHTMLKGFAKVS 114
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
L KAL +F +M+ + +P + + +L+ ++ + L +S S D++
Sbjct: 115 DLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
G+ + Y K + E + RM + DL+++N ++ Y + ++ KS+
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMP----ERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
KPS T S++ RL + + G+ +L+ MY C +
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP-DASTYKLLY 411
A++LFDG++E V + N+M+D Y N P+EA +FQ+ V P D S L+
Sbjct: 290 ARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 120/287 (41%), Gaps = 17/287 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+ + L+ + K G A LF M + +NS+I A++ + + +A+
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGM----LERNVVSWNSMIDAYVQNENPKEAML----I 324
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F+KM E KP V+ L A A G +E+ + K E + ++ N ++ Y
Sbjct: 325 FQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K + +M +++S L+++N +I + + + F + KP
Sbjct: 384 KCKEVDTAASMFGKLQSRT----LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+ S++ + + A+ + + + +L+ MY C + A+ +FD +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
E V +T NAM+D Y + + A LF+ + + P+ T+
Sbjct: 500 SERHV----TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 20/270 (7%)
Query: 116 MADNGVYSKLISVMGKK------GQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M D GV +SVMG G ++ G + SV NSLIS +
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC---- 383
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K K + A F K++ +V++N ++ FAQ G+ + F + V PD
Sbjct: 384 KCKEVDTAASMFGKLQ-----SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+TY V+ A + + + + + + ++ L+D Y K +F
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ + + T+N+M+ YG A +F++M + P+ VT S+I
Sbjct: 499 M----SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 350 VSKAKELFDGLVES-KVQIKVSTLNAMLDV 378
V + F + E+ +++ + AM+D+
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D + N+ +S +L D L+ A FE GM TYN ++ +F + G +
Sbjct: 593 DVDMMNTFLSIYLSKGD----LSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQT 648
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+ + E+ + DI TYN ++ GK G A+L R+ D++ +N LI+
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLIN 708
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+ GK + D+ Q+F + + P + ++N+M+ KA +A K M + G P
Sbjct: 709 ALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Query: 333 SFVTHESLIYM 343
+ VT L Y+
Sbjct: 769 NHVTDTILDYL 779
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 18/242 (7%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
DN Y LI K + AM ++ EM+ G PDT VYN L+ L +R T+A
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ-- 380
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
FEKM E + + TYNI++ + G+ E +LF DL + D T++ V
Sbjct: 381 --LFEKMV-QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ G + ++ M++ DL+T + L+ + K+ ++D E++ K + P
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES---LIYMYGFCDCVSKAK 354
++ +N+ V +A LK Q + Y P F + S ++ M G D + A+
Sbjct: 498 NVLRWNAGV----EASLKR------PQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAE 547
Query: 355 EL 356
E+
Sbjct: 548 EV 549
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 93 LGKHDKWLPC--LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGC 150
L K D L C E+F M + Y+ ++S KKG + A + +M C
Sbjct: 605 LSKGDLSLACKLFEIFNGMGVTD---LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFC 661
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
D + YN +I L + + L K G +IV YN ++ A +A ++
Sbjct: 662 AADIATYNVIIQG-LGKMGRADLASAVLDRLTKQGGY----LDIVMYNTLINALGKATRL 716
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++ LF + + ++PD+ +YN +++ K G ++E L M C P+ +T + +
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTI 775
Query: 271 IDSYGKKQQ 279
+D GK+ +
Sbjct: 776 LDYLGKEME 784
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMR------NTGCRPDTSVYN 158
VF ++ + + D Y+ I G G A+ LF EM+ + PD YN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
SLI L K K AL ++++K + +P+ TY I+++ ++ +++ ++
Sbjct: 294 SLIHV-LCLFGKAK---DALIVWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAMRIYG 348
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
++ + PD YN ++D K + E + +M + T+N+LID +
Sbjct: 349 EMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ + +F L + + TF+ + L + + A + ++M G++ VT
Sbjct: 409 RAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 339 SLI 341
SL+
Sbjct: 469 SLL 471
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 104/202 (51%), Gaps = 7/202 (3%)
Query: 124 KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE- 182
K++ + ++G + + + MR + + V + ++ A ++ K + A+A+ +E
Sbjct: 323 KVVLMYVREGNMETTLEVVAAMR----KAELKVTDCILCAIVNGFSKQRGFAEAVKVYEW 378
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
MK E C+ VTY I + A+ + K + LF ++ + + Y+ +MD YGK
Sbjct: 379 AMK--EECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKT 436
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
+ + ++ +MK CKP++ +N LID +G+ + E+++K + R+K P ++
Sbjct: 437 RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 303 NSMVLNYGKARLKDKAENVFKQ 324
SM+ Y +++ ++ ++++
Sbjct: 497 TSMISAYNRSKELERCVELYQE 518
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 157/334 (47%), Gaps = 17/334 (5%)
Query: 91 EELGKHDKWLPCLEVFRWMQKQRW-YMA--DNGVYSKLISVMGKKGQTRLAMWLFSEMRN 147
E++G++ K +E+F+ + QR ++A +Y+ + S + K G+ A+ + EM++
Sbjct: 220 EKIGENHK---VVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKD 276
Query: 148 TGCRPDTSVYNSLISAHLHSRDK--TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFA 205
G + +Y+ LI A +R+ T+ L K G + +K E C ++ Y
Sbjct: 277 KGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMY-------V 329
Query: 206 QAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK-RGMIREMEAMLTRMKSNQCKPDL 264
+ G +E + + ++ + +++ + K RG ++ MK +C+
Sbjct: 330 REGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMK-EECEAGQ 388
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+T+ + I++Y + ++++K E +F +++ + +++++ YGK R A + +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + G P+ + SLI M+G + +A++++ + +KV + +M+ Y +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ L+Q R + D + ++ ++K +
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 137/319 (42%), Gaps = 7/319 (2%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEK 183
L++V+ + + L +F + + G P+ N L+ A L ++ ++ K L
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA-LCKKNDIESAYKVLDEIPS 219
Query: 184 MKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG 243
M + PN+VTY IL + G +E + +++ + PD TY +MD Y K G
Sbjct: 220 MGLV----PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
E ++ M+ N+ +P+ +T+ ++I + K+++ + +F +L P
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
++ + D+A ++++M + P +LI+ V++A++LFD +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKG 395
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXX 423
+ + T N ++ C EA L+ K P+A TY +L + +K +
Sbjct: 396 SIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 424 XXXXXXXXXXGIIPNKRFF 442
G PNK F
Sbjct: 455 VRVLEEMLEIGCFPNKTTF 473
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
+R +M D+ + K+I + + + A L+ +M C PD N+L+S +H K
Sbjct: 324 ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD----NALLSTLIHWLCKE 379
Query: 172 KALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT 231
+ +A F++ + + P+++TYN ++ + G++ + L+ D+ E P+ +T
Sbjct: 380 GRVTEARKLFDEFE--KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK-KQQFDKMEQVFKSL 290
YN +++ K G ++E +L M C P+ TF +L + K ++ D M+ V ++
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Query: 291 LRSK 294
+ K
Sbjct: 498 MNGK 501
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 39/249 (15%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ ++ +G A + EM + G PD + Y L+ + K ++A
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC----KLGRFSEAATVM 284
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ M+ E +PN VTY +++RA + K + ++F ++ E PD V+DA +
Sbjct: 285 DDMEKNE-IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 242 RGMIREMEAMLTRMKSNQCKPD----------------------------------LITF 267
+ E + +M N C PD L+T+
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTY 403
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
N LI +K + + +++ + K KP+ T+N ++ K + V ++M E
Sbjct: 404 NTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Query: 328 MGYAPSFVT 336
+G P+ T
Sbjct: 464 IGCFPNKTT 472
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y +I + K+ ++ A +F EM PD+S+ +I A + +A G +
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH----KVDEACGLW 354
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM C P+ + ++ + G+V + LF + ++ + P + TYN ++ +
Sbjct: 355 RKMLK-NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCE 412
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+G + E + M +CKP+ T+N+LI+ K + +V + +L P+ T
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Query: 302 FNSMVLNYGKARLKDKAENVFK 323
F ++L G +L K E+ K
Sbjct: 473 F--LILFEGLQKL-GKEEDAMK 491
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYT----YNGVMDAYGKRGMIREM 248
N TY+ IL ++A + V SL DL S P I + ++ YG G
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLMADLRNSY--PPIKCGENLFIDLLRNYGLAGRYESS 139
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK----PSLPTFNS 304
+ R+ K + + N L++ + Q+FD + +FK+ SKE P++ T N
Sbjct: 140 MRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN---SKESFGITPNIFTCNL 196
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESK 364
+V K + A V ++ MG P+ VT+ +++ Y + AK + + +++
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
+T ++D YC EA ++ ++ P+ TY ++ +A K
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A +F EM +P YNSLI + D + KA E M +R +PN VT+
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD----MGKAKSLLEDMIK-KRIRPNAVTF 259
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++++ G+ + L D++ P + Y +M GKRG I E + +L MK
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+ KPD++ +N+L++ + + + +V + KP+ T+ M+ + + D
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379
Query: 318 AENVFKQMTEMGYAPSFVTHESLI 341
NV M + P+ T ++
Sbjct: 380 GLNVLNAMLASRHCPTPATFVCMV 403
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 123/261 (47%), Gaps = 7/261 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
++ LI GK G A+ +F ++ + C N+LI+ + + + L KA +
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGE----LEKAKSF 173
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F+ K M R +PN V++NI+++ F E +F ++ E V P + TYN ++
Sbjct: 174 FDGAKDM-RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ + + +++L M + +P+ +TF LL+ K ++++ +++ + KP L
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI-YMYGFCDCVSKAKELFDG 359
+ ++ + GK D+A+ + +M + P V + L+ ++ C V +A +
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR-VPEAYRVLTE 351
Query: 360 LVESKVQIKVSTLNAMLDVYC 380
+ + +T M+D +C
Sbjct: 352 MQMKGCKPNAATYRMMIDGFC 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%)
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
+Y+ ++ A++ + V+ + + + V + G++ YGK G + + + ++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
S C + + N LI+ + +K + F + +P+ +FN ++ +
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
+ A VF +M EM PS VT+ SLI D + KAK L + +++ +++ T +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 376 LDVYCINNLPQEADSL 391
+ C EA L
Sbjct: 263 MKGLCCKGEYNEAKKL 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML--TRMKSNQCKPDLITFN 268
E+ SLF E D +Y+ ++ K ++ +L R ++ +C+ L F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL--FM 120
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
LI YGK DK VF + ++ + N+++ +KA++ F +M
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 329 GYAPSFVTHESLIYMYGF---CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLP 385
P+ V+ LI GF CD + K +FD ++E +VQ V T N+++ C N+
Sbjct: 181 RLRPNSVSFNILIK--GFLDKCDWEAACK-VFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKA 413
+A SL + ++ P+A T+ LL K
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 18/232 (7%)
Query: 108 WMQKQRWYMADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
WM+ M + GV YS +IS K G + LF M+ PD VYN+++
Sbjct: 290 WME-----MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
H+ K +++A + M+ + +PN+VTYN +++ +A K E+ +F ++
Sbjct: 345 ----HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
E + P I TY+ M + G E+ +L +M+ C+P + T+ +LI + + FD
Sbjct: 401 EKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
+ ++ + P L ++ M+ ++A +K+M + G P+
Sbjct: 458 NVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 140/324 (43%), Gaps = 22/324 (6%)
Query: 97 DKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV 156
+ W F W KQ+ Y+ Y +IS++GK + A L EMR + S+
Sbjct: 139 NDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR----KFSPSL 194
Query: 157 YNS-----LISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
NS +I + D + KA+ F K + + I + +L A + V
Sbjct: 195 VNSQTLLIMIRKYCAVHD----VGKAINTFHAYKRF-KLEMGIDDFQSLLSALCRYKNVS 249
Query: 212 QVNSL-FKDLDESIVSPDIYTYNGVMDAYGKR-GMIREMEAMLTRMKSNQCKPDLITFNL 269
L F + D+ D ++N V++ + G RE E + M + K D+++++
Sbjct: 250 DAGHLIFCNKDK--YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 307
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM-TEM 328
+I Y K +K+ ++F + + +P +N++V KA +A N+ K M E
Sbjct: 308 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 367
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
G P+ VT+ SLI +AK++FD ++E + + T +A + + +E
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEV 424
Query: 389 DSLFQRARSIKVLPDASTYKLLYK 412
L + R + P TY +L +
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIR 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
K ++V+Y+ ++ +++ G + +V LF + + + PD YN V+ A K + E
Sbjct: 299 KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARN 358
Query: 251 MLTRMKSNQ-CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
++ M+ + +P+++T+N LI K ++ ++ +QVF +L P++ T+++ +
Sbjct: 359 LMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM--- 415
Query: 310 GKARLKDKAENVFK---QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ 366
R+ E VF+ +M +MG P+ T+ LI L+D + E V
Sbjct: 416 ---RILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 472
Query: 367 IKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+S+ M+ +N +EA ++ + + P+ + ++ ++
Sbjct: 473 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
LI GK G +W++ +M+ G P YN L++ + + + A FE M
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM----FVDSAERVFEVM 248
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVN------------------------------ 214
+ R KP+IVTYN +++ + +AG+ ++
Sbjct: 249 ES-GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 215 -----SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
+L++++DE + + ++ V+ K G + E + M KP++ + +
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LID Y K + ++ ++ KP + T++ +V K ++A + F G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
A + + + SLI G V +A+ LF+ + E NA++D + + EA
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 390 SLFQR 394
+LF+R
Sbjct: 488 ALFKR 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
N+ Y ++ A A V+++ + ++ + + N ++ ++GK GM+ E+ +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA 312
+MK N +P L T+N L++ D E+VF+ + + KP + T+N+M+ Y KA
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 313 RLKDKAENVFKQMTEMGYAPSFVTHESLIYM----YGFCDCVSKAKELFDGLVESKVQIK 368
KA + M G+ +T+ ++I F CV+ L+ + E +Q+
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA----LYQEMDEKGIQVP 326
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+ ++ C E ++F+ P+ + Y +L Y K+ S
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 11/309 (3%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VF M+ R D Y+ +I K GQT+ AM +M G D Y ++I A
Sbjct: 244 VFEVMESGR-IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 165 LHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
D + +++M KG++ P+ +++++ + GK+ + ++F+++
Sbjct: 303 YADSD----FGSCVALYQEMDEKGIQ-VPPH--AFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
P++ Y ++D Y K G + + +L RM KPD++T++++++ K + ++
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
F + + ++S++ GKA D+AE +F++M+E G + +LI
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 343 MYGFCDCVSKAKELFDGLVESK-VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
+ V +A LF + E + V T +L + +EA L+ +
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 535
Query: 402 PDASTYKLL 410
P A+ ++ L
Sbjct: 536 PTAACFRAL 544
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 9/315 (2%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
F W +KQ+ Y + Y L+ V+ ++ SE++ S N+LI
Sbjct: 139 FCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIK--- 195
Query: 166 HSRDKTKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
S K + + L + KMK G+E P + TYN ++ A V+ +F+ ++
Sbjct: 196 -SFGKLGMVEELLWVWRKMKENGIE---PTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ PDI TYN ++ Y K G ++ L M++ + D IT+ +I + F
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+++ + + F+ ++ K ++ VF+ M G P+ + LI
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
Y V A L +++ + V T + +++ C N +EA F R + +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 404 ASTYKLLYKAYTKAN 418
+ Y L KA
Sbjct: 432 SMFYSSLIDGLGKAG 446
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
+Y+ LI K G A+ L M + G +PD Y+ +++ K + +AL
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC----KNGRVEEALD 418
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
YF + + N + Y+ ++ +AG+V++ LF+++ E + D Y YN ++DA+
Sbjct: 419 YFHTCR-FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 240 GKRGMIREMEAMLTRMKSNQ-CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
K + E A+ RM+ + C + T+ +L+ K+ + ++ +++ ++ P+
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
F ++ + +A + ++ MG E +I + +A +L D
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLAD 596
Query: 359 GLVESKVQ----IKVSTLNAMLDV 378
G+ E + I+ +NA+ V
Sbjct: 597 GITERGREVPGRIRTVMINALRKV 620
>AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:19639270-19640803 REVERSE
LENGTH=481
Length = 481
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+K I++ G+ LA+ LF E N TSVYN+L+ A+L + L +
Sbjct: 120 YAKGITISGRLKNVDLALSLFHESAN----KTTSVYNALMGAYLCNGLSHHCEQLFLDFN 175
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+ G P++ TYNI++ + + VE++ S+F L + + PD TYN ++ Y
Sbjct: 176 SQQDGPSSSTPSVSTYNILISLYGRLIMVERMESVFLQLQQLNILPDSSTYNNLIAGYIY 235
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+MEA MK+ KP L T+ L++ Y +ME +++++ R ++ +
Sbjct: 236 AWDWDKMEATFHSMKNGLVKPTLATYLLMLRGYANSGNLLRMEDMYQAVKRHVDRNEIKL 295
Query: 302 FNSMVLNYGKARLKD---KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
SM+ Y ++ KD K + + K + + Y P + L+ +Y D + + D
Sbjct: 296 IESMICAYYRSCHKDRIRKIKTLSKLIPKKSYKPWL--YLLLMQVYAKDDNLHAMENFID 353
Query: 359 GLVESKVQIKV-STLNAMLDVYCINNLPQEADSLFQRARS 397
+ +QI+ + +++ Y N + QRA S
Sbjct: 354 QAITKGLQIETDGIMRSIVASYFRCNAVDKLAKFVQRANS 393
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 11/262 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ LIS+ G+ +F +++ PD+S YN+LI+ ++++ D K A F
Sbjct: 191 YNILISLYGRLIMVERMESVFLQLQQLNILPDSSTYNNLIAGYIYAWDWDKMEAT----F 246
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
MK KP + TY ++LR +A +G + ++ +++ + + +I ++ AY +
Sbjct: 247 HSMKN-GLVKPTLATYLLMLRGYANSGNLLRMEDMYQAVKRHVDRNEIKLIESMICAYYR 305
Query: 242 ---RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF-KSLLRSKEKP 297
+ IR+++ + + KP L + LL+ Y K ME +++ + +
Sbjct: 306 SCHKDRIRKIKTLSKLIPKKSYKPWL--YLLLMQVYAKDDNLHAMENFIDQAITKGLQIE 363
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+ S+V +Y + DK ++ G+ S L+ MYG + + +
Sbjct: 364 TDGIMRSIVASYFRCNAVDKLAKFVQRANSAGWKMSRSMFHGLMIMYGSQKRFKEMENVL 423
Query: 358 DGLVESKVQIKVSTLNAMLDVY 379
+ K+ TL +L VY
Sbjct: 424 SEMESFKISRSKKTLCILLRVY 445
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 143/341 (41%), Gaps = 17/341 (4%)
Query: 110 QKQRWYMADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
++ R M +GV Y L+ G+ G + A+ L EM + G +T +YNS++
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
D A++ K ++R T I++R + G V++ + + E
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDR-----FTQAIVVRGLCRNGYVKEAVEFQRQISEK 425
Query: 224 IVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM 283
+ DI +N +M + + + + +L M D I+F LID Y K+ + ++
Sbjct: 426 KLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERA 485
Query: 284 EQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYM 343
+++ +++ + +L +NS+V K + AE V M VT+ +L+
Sbjct: 486 LEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNE 541
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVS--TLNAMLDVYCINNLPQEADSLFQRARSIKVL 401
V +A ++ + + + VS T N M++ C ++A + + V+
Sbjct: 542 SLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV 601
Query: 402 PDASTYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
PD+ TY L +++K S G+ P++ +
Sbjct: 602 PDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 132/304 (43%), Gaps = 18/304 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD-----KTKALA 175
V+ L+ + G + A + + R G N+ + L+ + K
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+LGY E N+ T+N+++ +F + K+ + S+F + + V P++ ++N +
Sbjct: 210 DSLGYVE----------NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 236 MDAYGKRGMIR---EMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+D K G +R ++ + M N P+ +T+N +I+ + K + D E++ +++
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVK 319
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
S + T+ ++V YG+A D+A + +MT G + V + S++Y +
Sbjct: 320 SGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEG 379
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A + + +QI T ++ C N +EA ++ K++ D + L
Sbjct: 380 AMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMH 439
Query: 413 AYTK 416
+ +
Sbjct: 440 HFVR 443
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 135/331 (40%), Gaps = 41/331 (12%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
Y+ + ++ +I K+ + A+ +F M G P+ +N +I + D AL
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFAL 273
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
+ LG M G PN VTYN ++ F +AG+++ + D+ +S V + TY
Sbjct: 274 -QLLGKMGMMSG-NFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI-----------------DSYGKK 277
++DAYG+ G E + M S + + +N ++ D K
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 278 QQFDKMEQ--VFKSLLRS----------------KEKPSLPTFNSMVLNYGKARLKDKAE 319
Q D+ Q V + L R+ K + N+++ ++ + + A+
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
+ M G + ++ +LI Y + +A E++DG+++ + N++++
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 380 CINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ A+++ A IK D TY L
Sbjct: 512 SKRGMAGAAEAVVN-AMEIK---DIVTYNTL 538
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 12/222 (5%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
G+ K +S+ + G L M+ +G P+ VYN+L LH+ K + +A
Sbjct: 186 GILMKGLSLTNRIGD---GFKLLQIMKTSGVAPNAVVYNTL----LHALCKNGKVGRARS 238
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+MK +PN VT+NI++ A+ K+ Q L + PD+ T VM+
Sbjct: 239 LMSEMK-----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 240 GKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSL 299
G + E +L R++S K D++ N L+ Y + ++ F + R P++
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 300 PTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
T+N ++ Y + D A + F M +F T +LI
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 15/283 (5%)
Query: 133 GQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKP 192
G+ R+A F EM G P+ YN LI+ + L AL F MK + +
Sbjct: 332 GKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC----DVGMLDSALDTFNDMK-TDAIRW 386
Query: 193 NIVTYNIILRAFAQAGKVE---QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
N T+N ++R + G+ + ++ + +D D ++ I YN V+ + K R +
Sbjct: 387 NFATFNTLIRGLSIGGRTDDGLKILEMMQDSD-TVHGARIDPYNCVIYGFYKEN--RWED 443
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
A+ +K + P + + + S +K D ++ + ++ PS+ + ++ Y
Sbjct: 444 ALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRY 503
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQI 367
+ +++ + M GY P T ++I GFC D V + + + E
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVII--GFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ N +L+ C+ Q+A LF R ++PD S + L
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL 604
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 129/314 (41%), Gaps = 12/314 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLI 161
LE FRW ++ Y L + + L EM ++ G PD +++ ++I
Sbjct: 60 LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTII 119
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF-KDL 220
+R K + + K KP++ +N IL + ++ F + +
Sbjct: 120 RGFGRAR-LIKRVISVVDLVSKFG----IKPSLKVFNSILDVLVKE-DIDIAREFFTRKM 173
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
S + D+YTY +M I + +L MK++ P+ + +N L+ + K +
Sbjct: 174 MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+ +SL+ ++P+ TFN ++ Y + ++ + ++ +G+ P VT +
Sbjct: 234 GRA----RSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKV 400
+ + VS+A E+ + + ++ V N ++ YC + A F
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY 349
Query: 401 LPDASTYKLLYKAY 414
LP+ TY LL Y
Sbjct: 350 LPNVETYNLLIAGY 363
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ L+ + K G+ A L SEM+ P+ +N LISA+ + +
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQK----------L 264
Query: 181 FEKMKGMERC-----KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+ M +E+C P++VT ++ G+V + + + ++ D+ N +
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ Y G +R + M+ P++ T+NLLI Y D F +
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
+ + TFN+++ D + + M +
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 152/351 (43%), Gaps = 44/351 (12%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
+ R M++++ + Y+ +I K+G A+ L EM + G + SLI+ H
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
+ D L AL F+KM+ E PN VT+++++ F + G++E+ +K ++
Sbjct: 350 CKNND----LVSALVLFDKMEK-EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 225 VSP----------------------------------DIYTYNGVMDAYGKRGMIREMEA 250
++P +++ N ++ K+G E
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+L++M+S P+++++N ++ + +++ D VF ++L KP+ T++ ++
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESK-VQI 367
+ + A V MT + V ++++I G C SKA+EL ++E K + +
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTII--NGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ N+++D + A + ++ + P+ TY L K N
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 122/283 (43%), Gaps = 10/283 (3%)
Query: 137 LAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM--ERCKPNI 194
LA +FS + G +P+ Y+ LI + D+ AL E + M + N
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL-------EVVNHMTSSNIEVNG 548
Query: 195 VTYNIILRAFAQAGKVEQVNSLFKD-LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
V Y I+ + G+ + L + ++E + +YN ++D + K G + A
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
M N P++IT+ L++ K + D+ ++ + K +P + +++ + K
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+ A +F ++ E G PS + SLI + + A +L+ +++ ++ + T
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 374 AMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
++D + A L+ +++ ++PD Y ++ +K
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 15/234 (6%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M NG+ Y+ L++ + K + A+ + EM+N G + D Y +LI
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC---- 665
Query: 170 KTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
K + A F ++ +G+ +P YN ++ F G + L+K + + +
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQP---IYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
D+ TY ++D K G + + T M++ PD I + ++++ KK QF K+ ++F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
+ + ++ P++ +N+++ + + D+A + +M + G P T + L+
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 158/395 (40%), Gaps = 40/395 (10%)
Query: 25 RSAPPTRISFGSIPTRPKRKKTNDDDSETRELVRLLTRKISDKEPLERTL--NKYVRLVR 82
R P +S+ ++ R+K D L R++ I LE+ L N Y +
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMD-------LARIVFSNI-----LEKGLKPNNYTYSIL 519
Query: 83 TEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWL 141
+ CF HD+ LEV M + NGV Y +I+ + K GQT A L
Sbjct: 520 IDGCF------RNHDEQ-NALEVVNHMTSSNIEV--NGVVYQTIINGLCKVGQTSKAREL 570
Query: 142 FSEMRNTG--CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNI 199
+ M C S YNS+I K + A+ +E+M G PN++TY
Sbjct: 571 LANMIEEKRLCVSCMS-YNSIIDGFF----KEGEMDSAVAAYEEMCG-NGISPNVITYTS 624
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
++ + +++Q + ++ V DI Y ++D + KR + A+ + +
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK-- 317
P +N LI + ++K +L+ + L T+ +++ LKD
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI----DGLLKDGNL 740
Query: 318 --AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
A ++ +M +G P + + ++ K ++F+ + ++ V V NA+
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ + EA L +LPD +T+ +L
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L K+++ LE+ R K + D Y LI K+ A LFSE+
Sbjct: 625 LMNGLCKNNRMDQALEM-RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM-KGMERCKPNIVTYNIILRAFAQA 207
G P +YNSLIS R+ +A AL ++KM K RC ++ TY ++ +
Sbjct: 684 GLNPSQPIYNSLISGF---RNLGNMVA-ALDLYKKMLKDGLRC--DLGTYTTLIDGLLKD 737
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
G + + L+ ++ + PD Y +++ K+G ++ M MK N P+++ +
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV 306
N +I + ++ D+ ++ +L P TF+ +V
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 149/371 (40%), Gaps = 57/371 (15%)
Query: 83 TEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWL 141
T HC K++ + L +F M+K+ + N V +S LI K G+ A+
Sbjct: 347 TGHC--------KNNDLVSALVLFDKMEKEG--PSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 142 FSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIIL 201
+ +M G P +++I L K + +AL F++ E N+ N IL
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWL----KGQKHEEALKLFDE--SFETGLANVFVCNTIL 450
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
+ GK ++ L ++ + P++ +YN VM + ++ + + + + K
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 262 PDLITFNLLID-----------------------------------SYGKKQQFDKMEQV 286
P+ T+++LID K Q K ++
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 287 FKSLLRSKEK-PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
+++ K S ++NS++ + K D A +++M G +P+ +T+ SL M G
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL--MNG 628
Query: 346 FC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
C + + +A E+ D + V++ + A++D +C + + A +LF + P
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 404 ASTYKLLYKAY 414
Y L +
Sbjct: 689 QPIYNSLISGF 699
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 9/275 (3%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ + S G PD+ +Y+ + A KT LA A +MK + C P+ TY
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACC----KTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
++ A + G ++ L ++ +S ++ ++ + K + + +M+
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
P+ +TF++LI+ + K + +K + +K + PS+ ++++ + K + ++
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYM--YGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
A +F + E G A FV + L ++ G D +A EL + + V + N +
Sbjct: 428 ALKLFDESFETGLANVFVCNTILSWLCKQGKTD---EATELLSKMESRGIGPNVVSYNNV 484
Query: 376 LDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ +C A +F + P+ TY +L
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 136/326 (41%), Gaps = 8/326 (2%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP 152
L K + + ++ + M K+ + D Y+ LI ++ K A+W + + G R
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D Y++++ H+ K +++A +M C P++VTY ++ F + G+V++
Sbjct: 417 DKLGYSAIV----HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
L + + P+ +Y +++ + G E M+ + + P+ IT+++++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
++ + + V + ++ P N ++ + + +A ++ G A
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 333 SFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
+ V ++I +GFC D + A + D + V T ++D EA
Sbjct: 593 NVVNFTTVI--HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATE 650
Query: 391 LFQRARSIKVLPDASTYKLLYKAYTK 416
L ++ + P TY+ + Y +
Sbjct: 651 LMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 146/360 (40%), Gaps = 36/360 (10%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L KHD L + Q ++ + D YS ++ + K+G+ A L +EM +
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQ-EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 149 G-CRPDTSVYNSLISA--HLHSRDKTKALAKAL----------GYFEKMKGMERC----- 190
G C PD Y ++++ L DK K L + + Y + GM R
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 191 -------------KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
PN +TY++I+ + GK+ + + +++ P N ++
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + G E + + C +++ F +I + + + D V + +
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+ T+ ++V GK +A + K+M G P+ VT+ ++I+ Y C + K +L
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRY--CQ-MGKVDDLV 684
Query: 358 DGLVESKVQIKVSTL-NAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
L + + K T+ N +++ C+ +EAD+L + DA T L + Y K
Sbjct: 685 AILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLK 744
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L+ F W +Q Y D VY ++ V+ K + + + M+ G ++ ++
Sbjct: 191 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
++ + AL K L ++ G+E PN++ N + F +A ++E+ + +
Sbjct: 251 SYSRAGQLRDAL-KVLTLMQR-AGVE---PNLLICNTTIDVFVRANRLEKALRFLERMQV 305
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ P++ TYN ++ Y + E +L M S C PD +++ ++ K+++ +
Sbjct: 306 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 365
Query: 283 MEQVFKSLLRSKEKPSLP---TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHES 339
+ + K + +KE +P T+N+++ K D+A K E G+ + + +
Sbjct: 366 VRDLMKKM--AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 340 LIYMYGFCDCVSKAKELFDGLV-ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
+++ +S+AK+L + ++ + V T A+++ +C +A L Q +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 399 KVLPDASTYKLLYKAYTKAN 418
P+ +Y L +
Sbjct: 484 GHKPNTVSYTALLNGMCRTG 503
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 70 LERTLNK-----YVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSK 124
+E LNK V H F +EL D L L+ + K AD Y+
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDEL---DAALSVLDDMYLINKH----ADVFTYTT 634
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
L+ +GKKG+ A L +M + G P Y ++I H + + + EKM
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI----HRYCQMGKVDDLVAILEKM 690
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
++C+ YN ++ GK+E+ ++L + + D T +M+ Y K+G+
Sbjct: 691 ISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747
Query: 245 IREMEAMLTRMKSNQCKPDL 264
+ RM + PD+
Sbjct: 748 PLSAYKVACRMFNRNLIPDV 767
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 4/231 (1%)
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
RP S + L+S + D + + + G+E P+ VT +I +R+ + G+V
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLE---PDQVTTDIAVRSLCETGRV 175
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN-QCKPDLITFNL 269
++ L K+L E PD YTYN ++ K + + + M+ + KPDL++F +
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LID+ + + + L + KP +N+++ + +A V+K+M E G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
P +T+ +LI+ V +A+ +V++ + +T ++++ C
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ LI + R AM+L S++ N G +PD +YN+++ ++A+G +
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC----TLSKGSEAVGVY 288
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+KMK E +P+ +TYN ++ ++AG+VE+ K + ++ PD TY +M+ +
Sbjct: 289 KKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 242 RG 243
+G
Sbjct: 348 KG 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 116 MADNGVYSKLISV------MGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M +NG+ ++ + + G+ A L E+ PDT YN L+ HL
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK-HLC--- 205
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K K L + ++M+ KP++V++ I++ + + + L L + PD
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+ YN +M + E + +MK +PD IT+N LI K + ++ K+
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 290 LLRSKEKPSLPTFNSMV 306
++ + +P T+ S++
Sbjct: 326 MVDAGYEPDTATYTSLM 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 6/161 (3%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTSVYNSLISAHLHSRDKTKALAK 176
D Y+ L+ + K + EMR+ +PD + LI +S++ +A+
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM-- 250
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
Y G KP+ YN I++ F K + ++K + E V PD TYN ++
Sbjct: 251 ---YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKK 277
K G + E L M +PD T+ L++ +K
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCR-PDTSVYNSLISAHL-HSRDKTKALAKAL 178
+++ L+ K G A + EM+ +G P++ Y++L+ HSR K +A+
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK-----EAV 252
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
FE M E P+ VT+N+++ F +AG+VE+ + + ++ +P++Y Y+ +M+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
+ K G I+E + +K K D + + L++ + + + D+ ++ + S+ +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 299 LPTFNSMV 306
T+N ++
Sbjct: 373 TLTYNVIL 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 145/319 (45%), Gaps = 13/319 (4%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L++F +Q+ + +N YS L+ + + + + +M+ CR S++ +L+
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
H D K + F ++ + R KP++ + L +G+V L
Sbjct: 133 -HFSRSDLHD---KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH 188
Query: 223 SI-VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK-SNQCKPDLITFNLLIDSYGKKQQF 280
++ + P+ +N ++ + K G I ++ MK S P+ IT++ L+D +
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 281 DKMEQVFKSLLRSKE--KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
+ ++F+ ++ SKE P TFN M+ + +A ++A+ + M + G P+ +
Sbjct: 249 KEAVELFEDMI-SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 339 SLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
+L M GFC + +AK+ FD + ++ +++ +++ +C N EA L +
Sbjct: 308 AL--MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 397 SIKVLPDASTYKLLYKAYT 415
+ + D TY ++ + +
Sbjct: 366 ASRCRADTLTYNVILRGLS 384
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 115 YMADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
+M NG YS L++ K G+ + A F E++ TG + DT Y +L++ +
Sbjct: 293 FMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
+ +A+ K LG +MK RC+ + +TYN+ILR + G+ E+ + V +
Sbjct: 353 ETDEAM-KLLG---EMKA-SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+Y +++A G + + L+ M P T+N L+ + + +V
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKAR 313
LR P ++ ++V + K R
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKER 492
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 124 KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEK 183
+L+ + K A F + + G P Y+ L+ RD + A F++
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARK----VFDE 233
Query: 184 MKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
M +ER C +++ YN +L A ++G V+ +F+++ + PD Y++ + AY
Sbjct: 234 M--LERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDA 291
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G + +L RMK P++ TFN +I + K ++ D + +++ P T+
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
NS++ + ++A + +M P T+ ++ + +A E+++G+ E
Sbjct: 352 NSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSE 411
Query: 363 SKVQIKVSTLNAML 376
K V+T M+
Sbjct: 412 RKFYPTVATYTVMI 425
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 145/405 (35%), Gaps = 86/405 (21%)
Query: 50 DSETRELVRLLTRKISD----KEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWL--PCL 103
D + +LV ++R +SD K+ LE TL Y V + L E++ K K L P
Sbjct: 31 DPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSN----LVEQVLKRCKNLGFPAH 86
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRL-------------------AMWL--- 141
F W ++ + Y L+ ++G Q L W+
Sbjct: 87 RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 146
Query: 142 --------------FSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGM 187
F+ M G +P + L LHS K + A +F K KG
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQL----LHSLCDKKHVNHAQEFFGKAKGF 202
Query: 188 ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIRE 247
P+ TY+I++R +A+ + DA G R + E
Sbjct: 203 G-IVPSAKTYSILVRGWAR----------------------------IRDASGARKVFDE 233
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
M L R C DL+ +N L+D+ K D ++F+ + KP +F +
Sbjct: 234 M---LER----NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
Y A A V +M P+ T +I + V A L D +++
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
T N+++ +C + A L R K LPD TY ++ K
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 10/239 (4%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ +IS M GQ A+ LF ++ + G +PD++ +NSLIS + + +A +F
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF----SQLGKVIEAFKFF 356
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E+M + P++ +L A + ++ + + ++ DI+ ++D Y K
Sbjct: 357 ERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 242 RGMIREMEAMLTRMKSNQCKP-DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G+ + R + KP D + +N++I YGK + + ++F+ L K +PSL
Sbjct: 416 CGLSSWARRIFDRFEP---KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLA 472
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMT-EMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
TF +++ +K +F+ M E GY PS +I + G + +AKE+ D
Sbjct: 473 TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAML 252
N++++N ++ G+ E LF+ LD + PD T+N ++ + + G + E
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 253 TRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA 312
RM S P L L+ + +++ ++++ + + S++ Y K
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKC 416
Query: 313 RLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTL 372
L A +F + P F +I YG A E+F+ L E KV+ ++T
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVF--WNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 373 NAMLDV--YCIN 382
A+L +C N
Sbjct: 475 TAVLSACSHCGN 486
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 134/327 (40%), Gaps = 45/327 (13%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLI-SVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
C + FR R ++ +G+ S + SV+G G M L +G + V SL
Sbjct: 113 CRDAFRMFGDAR--VSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSL 170
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
+S ++SR LA + FEK+ ++VTYN + + G + V S+F +
Sbjct: 171 VS--MYSRCGEWVLAARM--FEKVP-----HKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 221 DE-SIVSPDIYTYNGVMDA--------YGKR--GMIREMEAMLTRMKS-------NQCKP 262
+ S P+ T+ + A YG++ G++ + E M ++C+
Sbjct: 222 RKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRC 281
Query: 263 ---------------DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
+LI++N +I Q + ++F+ L KP T+NS++
Sbjct: 282 WKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLIS 341
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
+ + +A F++M + PS SL+ + KE+ ++++ +
Sbjct: 342 GFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAER 401
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQR 394
+ L +++D+Y L A +F R
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDR 428
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 143/352 (40%), Gaps = 45/352 (12%)
Query: 57 VRLLTRKISDKEPLERTLNKYV-RLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWY 115
VR L+++ + + ++ +V +L + C +L E+ G W + F WM+ Q Y
Sbjct: 129 VRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRG----WRQVRDFFSWMKLQLSY 184
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
VY+ ++ + G+ G+ ++A F EM GC PD +++ + + L
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
F K R + YN +L + + +V L+ ++ E V P+ +TY V
Sbjct: 245 -----FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
+ +Y K+G E MKS P+ +T++ +I
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI------------------------ 335
Query: 296 KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
SL KA +KA +++ M G PS T +++ +Y + KA
Sbjct: 336 --SLSV---------KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALS 384
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
LF + +K+ ++ +Y L +A S+F+ + +L D TY
Sbjct: 385 LFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTY 436
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
+ LI+V G++ + + A L+ + P SV S+I A++ + L A G F
Sbjct: 674 ATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYV----RCGWLEDAYGLF- 727
Query: 183 KMKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
M+ E+ C P VT +I++ A GK + + + E + D YN ++ A +
Sbjct: 728 -MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLE 786
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G ++ + RM ++ + T+N +I YG+ Q DK ++F + RS
Sbjct: 787 AGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKI 846
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+ +M+++YGK +A ++F +M + G P ++ ++ + + EL +
Sbjct: 847 YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME 906
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEAD 389
+ +ST ++ VY ++ EA+
Sbjct: 907 RNGRCTDLSTYLTLIQVYAESSQFAEAE 934
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 163 AHLHSRDKTKALAKALG------YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSL 216
A L RD L + G +F MK +P++V Y I+LR + Q GK++
Sbjct: 151 AKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEET 210
Query: 217 FKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT---FNLLIDS 273
F ++ E PD ++ Y + G AMLT K+ Q + L++ +N ++ S
Sbjct: 211 FLEMLEVGCEPDAVACGTMLCTYARWG---RHSAMLTFYKAVQERRILLSTSVYNFMLSS 267
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
KK K+ ++ ++ P+ T+ +V +Y K K++A F +M +G+ P
Sbjct: 268 LQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPE 327
Query: 334 FVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC-INNLPQEADSLF 392
VT+ S+I + KA L++ + + T ML +Y N P+ A SLF
Sbjct: 328 EVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPK-ALSLF 386
Query: 393 QRARSIKVLPDASTYKLLYKAYTK 416
K+ D L+ + Y K
Sbjct: 387 ADMERNKIPADEVIRGLIIRIYGK 410
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 127/294 (43%), Gaps = 5/294 (1%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
V +I + G A LF E GC P + L++A + +A +
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTC 765
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
EK + + V YN +++A +AGK++ + +++ + S V I TYN ++ YG
Sbjct: 766 LEK-----NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ + + + + + + D + +I YGK + + +F + + KP P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
++N MV +RL + + + + M G T+ +LI +Y ++A++ +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
E + + S +++L + +EA+ + + + PD++ + + K Y
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LI M + G+ + A ++ M +G YN++IS + + L KA
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY----GRGLQLDKA 828
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+ F + + N+I+ + + GK+ + SLF ++ + + P +YN ++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMH-YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ E++ +L M+ N DL T+ LI Y + QF + E+ +L++ K P
Sbjct: 888 ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI-TLVKEKGIP 946
Query: 298 SLPTFNSMVLN-YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
+ S +L+ KA + ++AE + +M+E G +P +++ Y C K
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Query: 357 FDGLVESKVQ 366
++ ++ S V+
Sbjct: 1007 YEKMIRSSVE 1016
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 22/288 (7%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M + GV Y+ ++S K+G A+ F EM++ G P+ Y+S+IS + + D
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
KA+G +E M+ + P+ T +L + + + SLF D++ + + D
Sbjct: 344 ----WEKAIGLYEDMRS-QGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADE 398
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF----NLLIDSYGKKQQFDKMEQ 285
++ YGK G+ + ++M + D T+ + ++S + D +E
Sbjct: 399 VIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIE- 457
Query: 286 VFKSLLRSKEKP-SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
++++++ P S + M+ Y K + D AE F+ +++ G P + ++ +Y
Sbjct: 458 ----MMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLY 512
Query: 345 GFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
+ KAK ++ +V + + VYC + EA L
Sbjct: 513 TRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 6/215 (2%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K ++ + YS +IS+ K G A+ L+ +MR+ G P +++S + K
Sbjct: 320 KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYY----K 375
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
T+ KAL F M+ + + V +I+R + + G S+F++ + + D
Sbjct: 376 TENYPKALSLFADME-RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEK 434
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
TY + + G + + ++ MK+ + +++ Y K Q D E+ F++L
Sbjct: 435 TYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL 494
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++ P + N M+ Y + L +KA+ KQ+
Sbjct: 495 SKTG-LPDASSCNDMLNLYTRLNLGEKAKGFIKQI 528
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
+E+F ++ Y+ D +Y+ +I GK G+ A+ LFSEM+ G +P T YN ++
Sbjct: 828 AIEIFSNARRSGLYL-DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGME---RCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
SR + E ++ ME RC ++ TY +++ +A++ + +
Sbjct: 887 KICATSRLHHEV-------DELLQAMERNGRC-TDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
+ E + ++ ++ A K GM+ E E +M PD ++ Y
Sbjct: 939 LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG 998
Query: 279 QFDKMEQVFKSLLRS 293
+K ++ ++RS
Sbjct: 999 DAEKGILFYEKMIRS 1013
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A+ +M N GC P YNS+I L + + LA + +++ + P++ TY
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKC-LFQENIIEDLASLVNIIQELDFV----PDVDTY 550
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
I++ + + ++ ++E + P + Y+ ++ + GK+G + E E +M
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+ +PD I + ++I++Y + + D+ ++ + +++ +PS T+ ++ + K + +K
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 318 AENVFKQMTEMGYAPSFVTHESLI 341
+M E G +P+ V + +LI
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALI 694
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 138/312 (44%), Gaps = 19/312 (6%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
++ D Y +++ + KK A + M G RP ++Y+S+I S K +
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG----SLGKQGRV 598
Query: 175 AKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+A F KM G++ P+ + Y I++ +A+ G++++ N L +++ + + P +TY
Sbjct: 599 VEAEETFAKMLESGIQ---PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTY 655
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
++ + K GM+ + L +M + P+++ + LI + KK F +F +
Sbjct: 656 TVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVF------KQMTEMGYAPSFVTHESLIYMYGF 346
+ K + +++ +A + K V K + + V+ S + YG
Sbjct: 716 NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYG- 774
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAST 406
S A E+ G V+ + + N ++ YC EA + + + ++P+ T
Sbjct: 775 --SKSFAMEVI-GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVT 831
Query: 407 YKLLYKAYTKAN 418
Y +L K++ +A
Sbjct: 832 YTILMKSHIEAG 843
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 49/333 (14%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKA 177
+YS +I +GK+G+ A F++M +G +PD Y +I+ + + D+ L +
Sbjct: 583 AIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVE- 641
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
E +K R P+ TY +++ F + G +E+ + E +SP++ Y ++
Sbjct: 642 ----EVVKHFLR--PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIG 695
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV---------FK 288
+ K+G + + M N K D I + L+ + K QV +
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 289 SLLRSKEKPSLPT----------------------------FNSMVLNYGKARLKDKAEN 320
L+R+K S+P+ N+++ Y A D+A N
Sbjct: 756 RLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYN 815
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
+ M + G P+ VT+ L+ + + A +LF+G Q+ STL L C
Sbjct: 816 HLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTL---LKGLC 872
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
P +A +L + + P+ +Y+ L +
Sbjct: 873 DFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 137/325 (42%), Gaps = 33/325 (10%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
+F M+ +Y+ D +Y+ L+ K +AM L+ M D ++N+LI
Sbjct: 259 LFDHMEVDGYYV-DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI--- 314
Query: 165 LHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLF-KDLD 221
H K L K F +M KG++ N+ TY+I++ ++ + G V+ LF +
Sbjct: 315 -HGFMKLGMLDKGRVMFSQMIKKGVQ---SNVFTYHIMIGSYCKEGNVDYALRLFVNNTG 370
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+S +++ Y ++ + K+G + + +L RM N PD IT+ +L+ K +
Sbjct: 371 SEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM----TEMGYAPSFVTH 337
+ +S+L + + P + + ++ K E++ ++ + V
Sbjct: 431 YAMVILQSILDNGCGINPPVIDDL------GNIEVKVESLLGEIARKDANLAAVGLAVVT 484
Query: 338 ESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTL----NAMLDVYCINNLPQEADSLFQ 393
+L + +S+ +E V + + L N+++ N+ ++ SL
Sbjct: 485 TALCSQRNYIAALSR--------IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVN 536
Query: 394 RARSIKVLPDASTYKLLYKAYTKAN 418
+ + +PD TY ++ K N
Sbjct: 537 IIQELDFVPDVDTYLIVVNELCKKN 561
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK-------- 172
+Y+ LI KKG + + LF M + D Y +L+S + + K
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 173 ----------------ALAKALG-YFEKMKGMERCK-------PNIVTYNIILRAFAQAG 208
++ +LG Y K ME PN+ +N I+ + AG
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
++++ + + + + + P++ TY +M ++ + G ++E+ + + C+PD + ++
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG---DIESAIDLFEGTNCEPDQVMYS 865
Query: 269 LLIDSYGK-KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
L+ K+ D + + + + +S P+ ++ ++ +RL +A V K M
Sbjct: 866 TLLKGLCDFKRPLDALALMLE-MQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAA 924
Query: 328 MGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
+ P + H LIY+ + +A+ LF +V+S
Sbjct: 925 LDIWPRSINHTWLIYILCEEKKLREARALFAIMVQS 960
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 112/255 (43%), Gaps = 21/255 (8%)
Query: 116 MADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M DNG+ Y L+ ++ K + + AM + + + GC + V + L + +
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVES 463
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRA--FAQAGKVEQVNSLFKDLDESIVSP 227
+A+ K + +VT + + A ++E++ +L +P
Sbjct: 464 LLGEIAR------KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG-------CTP 510
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
++YN V+ + +I ++ +++ ++ PD+ T+ ++++ KK D +
Sbjct: 511 LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
++ +P++ ++S++ + GK +AE F +M E G P + + +I Y
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 348 DCVSKAKELFDGLVE 362
+ +A EL + +V+
Sbjct: 631 GRIDEANELVEEVVK 645
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 133/351 (37%), Gaps = 55/351 (15%)
Query: 115 YMADNGV------YSKLISVMGKKGQTRLAMWLFSE-MRNTGCRPDTSVYNSLISAHLHS 167
+ DNG+ Y LI + + GQ +A +++ + G PD+SV +S++ +
Sbjct: 85 FAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKL 144
Query: 168 RDKTKALAK-----ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNS------- 215
R +A A A GY + + L AF +V++ S
Sbjct: 145 RRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCC 204
Query: 216 --LFKDL------DESIVSPD-----------IYTYNGVMDAYGKRGMIREMEAMLTRMK 256
LFK L +E+I D + Y + + KRG E EA+ M+
Sbjct: 205 KRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHME 264
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
+ D + + L+ Y K +++ ++ + FN+++ + K + D
Sbjct: 265 VDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLD 324
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
K +F QM + G + T+ +I Y V A LF V + +S
Sbjct: 325 KGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF---VNNTGSEDISR----- 376
Query: 377 DVYCINNLP---------QEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+V+C NL +A L R ++PD TY +L K K +
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
E+L +H K LP Q +R G ++I + GK G T+ A+ F M
Sbjct: 89 FIEDLLEHQKTLP--------QGRR-----EGFIVRIIMLYGKAGMTKQALDTFFNMDLY 135
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
GC+ +N+ + + D L + + V++NI +++F + G
Sbjct: 136 GCKRSVKSFNAALQVLSFNPD----LHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELG 191
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
++ +++++S ++PD+ TY ++ A K + M CKP+L TFN
Sbjct: 192 ILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFN 251
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+ I +++ + + + + +P T+N ++ + AR D AE V+ M
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGK 311
Query: 329 GYAPSFVTHESLIY 342
GY P+ ++++I+
Sbjct: 312 GYKPNLKIYQTMIH 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
EM +G PD Y +LISA L+ ++ + L +KG CKPN+ T+N+ ++
Sbjct: 202 EMEKSGLTPDVVTYTTLISA-LYKHERC-VIGNGLWNLMVLKG---CKPNLTTFNVRIQF 256
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+ N L + + V PD TYN V+ + E + T M KP+
Sbjct: 257 LVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPN 316
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
L + +I K FD + K +R K P+L T ++ K D+A+++ +
Sbjct: 317 LKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 147/367 (40%), Gaps = 49/367 (13%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
F+ L K + E+ + M K R + D Y+ LI +G+ A+ L EM G
Sbjct: 395 FDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
PD YN L+S + + + L +E+MK E KPN VT ++I+ A K
Sbjct: 454 MSPDLITYNVLVSGLARNGHEEEVLE----IYERMKA-EGPKPNAVTNSVIIEGLCFARK 508
Query: 210 VEQVNSLFKDLD---------------ESIVSPDIY-------------TYNGVMDAYGK 241
V++ F L+ E+ +S Y Y + +
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G + + +L +M + + +P +I ++ K + + +F +++ P L T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD------CV----- 350
+ M+ Y + KAE++F+ M + G P VT+ L+ Y D C
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 351 --SKAKELFDGLVESKVQIKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTY 407
KA E+ + + + V ++D C +NNL Q A+ LF R + PD Y
Sbjct: 689 GKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE-LFDRMIDSGLEPDMVAY 747
Query: 408 KLLYKAY 414
L +Y
Sbjct: 748 TTLISSY 754
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 45/315 (14%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIV 195
A+ F E R+ D YN + D L + FE ++ M+ P+++
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNV-------AFDALSKLGRVEEAFELLQEMKDRGIVPDVI 424
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
Y ++ + GKV L ++ + +SPD+ TYN ++ + G E+ + RM
Sbjct: 425 NYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
K+ KP+ +T +++I+ ++ + E F SL E+ S V Y +A L
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL----EQKCPENKASFVKGYCEAGLS 540
Query: 316 --------------------------------DKAENVFKQMTEMGYAPSFVTHESLIYM 343
+KA +V K+M+ P +I
Sbjct: 541 KKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGA 600
Query: 344 YGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPD 403
+ + V +A+ LFD +VE + + T M+ YC N Q+A+SLF+ + + PD
Sbjct: 601 FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPD 660
Query: 404 ASTYKLLYKAYTKAN 418
TY +L Y K +
Sbjct: 661 VVTYTVLLDRYLKLD 675
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 41/333 (12%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNI--- 194
A+ +M G + + + +S L K +AL F++ + M NI
Sbjct: 337 ALGFLDKMLGKGLKVNCVI----VSLILQCYCKMDMCLEALEKFKEFRDM-----NIFLD 387
Query: 195 -VTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
V YN+ A ++ G+VE+ L +++ + + PD+ Y ++D Y +G + + ++
Sbjct: 388 RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
M N PDLIT+N+L+ + +++ ++++ + KP+ T + ++ AR
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 314 LKDKAENVFKQMTEM----------GYAPS---------FVTHE-----SLIYMYGFCDC 349
+AE+ F + + GY + FV E S+ F C
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 350 VS----KAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDAS 405
+ KA ++ + +V+ S M+ +C N +EA LF ++PD
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 627
Query: 406 TYKLLYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
TY ++ Y + N GI P+
Sbjct: 628 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPD 660
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K L +ALG+ +KM G + K N V ++IL+ + + + FK+ + + D
Sbjct: 330 KNMNLPEALGFLDKMLG-KGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDR 388
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
YN DA K G + E +L MK PD+I + LID Y + + +
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
++ + P L T+N +V + +++ ++++M G P+ VT+ +I F
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
V +A++ F L + + K S + YC L ++A F R
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKG----YCEAGLSKKAYKAFVR 549
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 109 MQKQRWYMADNG--VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLH 166
++K Y + G + K+I K R A LF M G PD Y +I H
Sbjct: 579 LKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI----H 634
Query: 167 SRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF--------------AQAGKVEQ 212
+ + L KA FE MK KP++VTY ++L + + GK +
Sbjct: 635 TYCRLNELQKAESLFEDMK-QRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK-RK 692
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+ + ++ + + D+ Y ++D K + + + RM + +PD++ + LI
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLIS 752
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPS 298
SY +K D + L + PS
Sbjct: 753 SYFRKGYIDMAVTLVTELSKKYNIPS 778
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
S LI G+ AM +F EM G +N+L++A LHS D + + + F
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHS-DLFERVPQLFDEFP 164
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
+ P+ ++Y ++++++ +GK E+ + +D++ V I + ++ + K
Sbjct: 165 QR--YNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKN 222
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G++ E E++ M + C D +N+ + + +KE P
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYNVRL------------------MNAAKESP----- 259
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
++ + + ++M+ +G P V++ L+ Y +S+AK++++GL
Sbjct: 260 -------------ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE- 305
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
Q +T ++ CIN L + ++F+++ + +PD T K L + K N
Sbjct: 306 ---QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNN 358
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 127/295 (43%), Gaps = 30/295 (10%)
Query: 49 DDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRW 108
D EL RL+++K DK + + Y + + + LF ++
Sbjct: 278 DVQSAEELFRLMSKK--DKLVYDAMIACYTQNGKPKDALKLFAQM--------------- 320
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR 168
+++ + D S ++S + G T W+ S + G + D + SLI ++
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Query: 169 DKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPD 228
D AKA F + K + V+Y+ ++ G + NSLF + E + P+
Sbjct: 381 D----FAKAFKMFSNLN-----KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPN 431
Query: 229 IYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFK 288
+ T+ G++ AY G+++E MK + +P + +++D G+ + ++ ++ K
Sbjct: 432 VVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
Query: 289 SLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS-FVTHESLIY 342
S+ +P+ + +++L G + E ++ P+ +++H ++IY
Sbjct: 492 SM---PMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIY 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 9/225 (4%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE--SIVSPDIYTYNGVMDAYGKRGMIREM 248
K + + Y+ ++ + Q GK + LF + E S + PD T + V+ A + G
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
+ + + + K D + LID Y K F K ++F +L K ++++M++
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL----NKKDTVSYSAMIMG 406
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK 368
G + +A ++F M E P+ VT L+ Y V + + F+ + + ++
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPS 466
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
M+D+ +EA ++ +S+ + P+A + L A
Sbjct: 467 ADHYGIMVDMLGRAGRLEEA---YELIKSMPMQPNAGVWGALLLA 508
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 145/293 (49%), Gaps = 33/293 (11%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ +I+ K G R A LF + + R + + +++S +L S K L+ A F
Sbjct: 80 WTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRS----KQLSIAEMLF 132
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
++M ER N+V++N ++ +AQ+G++++ LF ++ E +I ++N ++ A +
Sbjct: 133 QEMP--ER---NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQ 183
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
RG I E + RM + D++++ ++D K + D+ ++F + + ++ +
Sbjct: 184 RGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM----PERNIIS 235
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
+N+M+ Y + D+A+ +F+ M E +A + ++I + ++KA LFD +
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMP 291
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA-RSIKVLPDASTYKLLYKA 413
E V + M+ Y N +EA ++F + R V P+ TY + A
Sbjct: 292 EK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 96/364 (26%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV--YNSLISAHLHSRDKTKALAKALG 179
++ ++S + Q +A LF EM P+ +V +N++I + S + KAL
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGYAQS----GRIDKALE 161
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
F++M ER NIV++N +++A Q G++++ +LF E + D+ ++ ++D
Sbjct: 162 LFDEMP--ER---NIVSWNSMVKALVQRGRIDEAMNLF----ERMPRRDVVSWTAMVDGL 212
Query: 240 GKRGMIREMEAMLTRMKSNQCKPD--LITFNLLIDSYGKKQQFDKMEQVFK--------- 288
K G + E + C P+ +I++N +I Y + + D+ +Q+F+
Sbjct: 213 AKNGKVDEARRLF------DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 289 ------SLLRSKE------------KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+R++E + ++ ++ +M+ Y + + ++A NVF +M G
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 331 A-PSFVTHES-----------------------------------LIYMYGFCDCVSKAK 354
P+ T+ S L+ MY + A+
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 355 ELFD-GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
++FD GLV Q + + N+M+ VY + +EA ++ + R P A TY L A
Sbjct: 387 KMFDNGLV---CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 414 YTKA 417
+ A
Sbjct: 444 CSHA 447
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D + +N++I+ + +R+ + KA G F++M + N++++ ++ + + + E+
Sbjct: 263 DFASWNTMITGFIRNRE----MNKACGLFDRMP-----EKNVISWTTMITGYVENKENEE 313
Query: 213 VNSLF-KDLDESIVSPDIYTYNGVMDAYGK-RGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++F K L + V P++ TY ++ A G++ + KS K +++T + L
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT-SAL 372
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
++ Y K + ++F + L + L ++NSM+ Y +A ++ QM + G+
Sbjct: 373 LNMYSKSGELIAARKMFDNGLVCQR--DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
PS VT+ +L++ V K E F LV
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 124/246 (50%), Gaps = 20/246 (8%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNT-GCRPDTS-VYNSLISAHLHSRDKT--KALAK 176
V+ L++ G+ +L+ +F E+ G P +S Y +L A +++ D T +L K
Sbjct: 107 VFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLK 166
Query: 177 ALGYFEKMKGMERCKP-NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+ E P ++ N I+ AFA+ ++++V + K++ E PD+ TYN V
Sbjct: 167 EIS--------ESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSV 218
Query: 236 MDAYGKRGMIREMEAMLTRMKSN-QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
+D G+ G++ E+ +L+ MK + ++IT+N +++ K +FD ++ +++
Sbjct: 219 LDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCG 278
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
+P L ++ +++ + G++ ++ +F +M + PS + +LI DC+ K+
Sbjct: 279 IEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALI------DCLKKSG 332
Query: 355 ELFDGL 360
+ L
Sbjct: 333 DFQSAL 338
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
V +++I + Q + + EM+ C+PD YNS+ L + + + LG
Sbjct: 179 VMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSV----LDILGRAGLVNEILGV 234
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
MK NI+TYN +L +A + + ++ ++ + + PD+ +Y V+D+ G
Sbjct: 235 LSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLG 294
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
+ G ++E + MK Q +P + + LID K F Q+ L
Sbjct: 295 RSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 162/378 (42%), Gaps = 38/378 (10%)
Query: 97 DKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM-RNTGCRPDTS 155
+ W LE F W++++ + ++++I ++GK + ++ L + M NT P+
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHV 118
Query: 156 ----VYNSLISAHL--------------HSRDKTK------AL--------AKALGYFEK 183
V+ ++AHL + RD+T AL A+ L + +
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKN 178
Query: 184 MKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRG 243
+ G N +N+ILR +++ G + +K +D V+ D+++Y+ MD K G
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 244 MIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
+ + MKS + K D++ +N +I + G Q + +VF+ + +P++ T N
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 304 SMV-LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
+++ L R++D A + +M + G P +T+ L + + S+ LF ++
Sbjct: 299 TIIKLLCEDGRMRD-AYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIR 354
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXX 422
S V+ K+ T ++ + Q +++ + PD++ Y + A +
Sbjct: 355 SGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDM 414
Query: 423 XXXXXXXXXXXGIIPNKR 440
G+ P +R
Sbjct: 415 AREYEEEMIERGLSPRRR 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ +I +G + +F EMR GC P+ + +N++I L + + +
Sbjct: 258 DVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL-LCEDGRMRDAYRM 316
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L K +G C+P+ +TY + F++ K ++ SLF + S V P + TY +M
Sbjct: 317 LDEMPK-RG---CQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKM----EQVFKSLLRS 293
+ + G ++ + + MK + PD +N +ID+ +K D E++ + L
Sbjct: 370 KFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Query: 294 KEKPSL 299
+ +P L
Sbjct: 430 RRRPEL 435
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+ +++ Q + W+F E+R G RP+ + Y + L S + +
Sbjct: 343 VYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLES----GKFDRVHDF 398
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES--IVSPDIY-------- 230
F KMK P +TY +++RA + GK+E+ +D+++ I + +Y
Sbjct: 399 FRKMKSSGEA-PKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLC 457
Query: 231 --------------------------TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
T+ G++ A G + + A+ MK ++C P++
Sbjct: 458 NNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMK-DKCDPNI 516
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP---TFNSMVLNYGKARLKDKAENV 321
T N+++ YG+ F + +++F+ ++ KE +P T++ M+ ++ + E+V
Sbjct: 517 GTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHV 576
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
++ M GY H S++ S + FD ++E
Sbjct: 577 YQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLE 617
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 162/370 (43%), Gaps = 66/370 (17%)
Query: 55 ELVRLLTRKISDKEPLERTLNKYVRLVR------TEHCFL-LFEELGKHDKWLPCLEVFR 107
E VR+L ++S +E E+ K+VR++ TE L + + LG+ W V
Sbjct: 183 EAVRVLVDRLSGREINEKHW-KFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVH 241
Query: 108 WM--QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM-RNTGCRPDTSVYNSLISAH 164
W+ K+R ++ VY+KL+SV+G + + A+ +F++M + PD + Y+ I+
Sbjct: 242 WVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHC-IAVT 300
Query: 165 LHSRDKTKALAKALGYFEK-----MKGMER------CKPNIVTYNIILRAFAQAGKVEQV 213
L K L K + + K + + +P++V YN IL A + + V
Sbjct: 301 LGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAV 360
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+ +F +L ++ + P+ TY M+ + G + +MKS+ P IT+ +L+ +
Sbjct: 361 SWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRA 420
Query: 274 YGKKQQFDK-------MEQ--------VFKSLL-----------------RSKE----KP 297
++ + ++ MEQ V+ L R K +P
Sbjct: 421 LWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRP 480
Query: 298 SLPTFNSMV---LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
TF ++ LN G D +F+ M + P+ T ++ +YG D S+AK
Sbjct: 481 LEITFTGLIAASLNGGHV---DDCMAIFQYMKD-KCDPNIGTANMMLKVYGRNDMFSEAK 536
Query: 355 ELFDGLVESK 364
ELF+ +V K
Sbjct: 537 ELFEEIVSRK 546
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 13/233 (5%)
Query: 102 CLEVFRWMQKQRWYMADNGV-YSKLISVMGKKGQTRLAMWLFSEM--RNTGCRPDTSVYN 158
L++++ ++++ D+GV Y +L+ K + AM + E N+ R YN
Sbjct: 255 VLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYN 314
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKP-----NIVTYNIILRAFAQAGKVEQV 213
++ A + +AL F+ +K E P N+ T+N+++ + GK E+
Sbjct: 315 YVLEA----LSENGKFDEALKLFDAVKK-EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+F+ + + SPD ++N +M+ ++ E E + M+ KPD T+ LL+D+
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
K+ + D+ +K+++ S +P+L +N + KA D A++ F M
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 10/256 (3%)
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRN--TGCRPDTSVYNSLISAHLHSRDK 170
+ ++ D VYS L+ K + L+ E++ G D VY L+ + +
Sbjct: 230 KGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEME 289
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP--- 227
+A+ Y E + + + + + YN +L A ++ GK ++ LF + + P
Sbjct: 290 KEAME---CYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHL 346
Query: 228 --DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ 285
++ T+N +++ Y G E + +M +C PD ++FN L++ + + E+
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYG 345
++ + KP T+ ++ K D+ +K M E P+ + L
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 466
Query: 346 FCDCVSKAKELFDGLV 361
+ AK FD +V
Sbjct: 467 KAGKLDDAKSFFDMMV 482
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--- 161
+F M++Q + + ++ +I G+ G T +A+ F EM++ G P +S + LI
Sbjct: 700 LFYEMRRQGCLITQD-TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 162 --------------------SAHLHSRDKTKALAKALGYFEKMKGMERCK--------PN 193
S + R+ + L K + C P
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV 818
Query: 194 IVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT 253
V Y+I +RA + GK+E+ S + D YTY ++ +RG +++ +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 254 RMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKAR 313
MK KP + + LI + K++Q +K+ + + + +PS+ T+ +M+ Y
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 314 LKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
++A N F+ M E G +P F T+ F +C+ +A + D L
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSK------FINCLCQACKSEDAL 979
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
+ D Y ++ + ++G + A+ + M+ G +P VY SLI K K L
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF----KEKQLE 906
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
K L +KM+G E C+P++VTY ++ + GKVE+ + F++++E SPD TY+
Sbjct: 907 KVLETCQKMEG-ESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
++ + + +L+ M P I F + ++ + D
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHD 1011
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 140/351 (39%), Gaps = 47/351 (13%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
F W++++ + G+Y+ ++S+ G+ + L SEM GC D + LIS +
Sbjct: 176 FNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVY- 234
Query: 166 HSRDKTKALAKALGYFEKMK--GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDES 223
K K + K L FEKM+ G E + YNI++R+ AG+ + +K++ E
Sbjct: 235 ---GKAKKIGKGLLVFEKMRKSGFE---LDATAYNIMIRSLCIAGRGDLALEFYKEMMEK 288
Query: 224 IVSPDIYTYNGVMDAYGK-----------------------------------RGMIREM 248
++ + TY ++D K G I+E
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEA 348
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF-DKMEQVFKSLLRSKEKPSLPTFNSMVL 307
++ +K+ + D F +L+ + + D +E V +++ ++ + ++
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV--DIMKRRKLDDSNVYGIIIS 406
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
Y + KA F+ + + G P T+ ++ K LF+ ++E+ ++
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ A++ + N EA +F + P +Y + K +++
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSS 517
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D++VY +IS +L D +KAL + FE +K R P + TY I++ + + E+
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQ----FEVIKKSGR-PPRVSTYTEIMQHLFKLKQFEK 451
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+LF ++ E+ + PD V+ + + + E + + M+ KP ++++ +
Sbjct: 452 GCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK 511
Query: 273 SYGKKQQFDKMEQVFKSLLRSK 294
+ ++D++ ++F + SK
Sbjct: 512 ELCRSSRYDEIIKIFNQMHASK 533
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 144/314 (45%), Gaps = 10/314 (3%)
Query: 68 EPLERTLNKYVRLVRTEHCFLLFEELGK----HDKWLPCLEVFRWMQKQRWYMADNGVYS 123
P++ L K++ L F+ E LG+ H L LE F++ K + +
Sbjct: 49 HPIQPILAKHIPLSSLSPEFVS-EVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFE 107
Query: 124 KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEK 183
K + ++ + A L +E+R P+ + S+ S L K + + L F K
Sbjct: 108 KTLHILARMRYFDQAWALMAEVRKD--YPNLLSFKSM-SILLCKIAKFGSYEETLEAFVK 164
Query: 184 M-KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
M K + R K + +NI+LRAF ++++ S+F+ L S +PD+ T N ++ + +
Sbjct: 165 MEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEA 223
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G + E M KP+ +T+ + ID + KK+ F + ++F+ + R ++
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
+++ G AR K KA +F ++++ G P + +L+ C VS A ++ + E
Sbjct: 284 TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEE 343
Query: 363 SKVQIKVSTLNAML 376
++ T ++M
Sbjct: 344 KGIEPDSVTFHSMF 357
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
+N +LR Q + +++ L PD+ T+N ++ + E EA MK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQF-QPDLQTFNILLSGWKSS---EEAEAFFEEMK 238
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
KPD++T+N LID Y K ++ +K ++ + +E P + T+ +++ G D
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
KA V K+M E G P + + I + + A +L D +V+ + +T N
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
V + N + L+ R + LP+ + L K + +
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKR 398
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDK 317
+Q +PDL TFN+L+ + ++ + + K KP + T+NS++ Y K R +K
Sbjct: 208 HQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEK 264
Query: 318 AENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLD 377
A + +M E P +T+ ++I G KA+E+ + E V+ NA +
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 378 VYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+CI +AD L + P+A+TY L ++ + AN
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAN 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAF 204
M+ G +PD YNSLI + R+ + KA +KM+ E P+++TY ++
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDRE----IEKAYKLIDKMREEEET-PDVITYTTVIGGL 291
Query: 205 AQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDL 264
G+ ++ + K++ E PD+ YN + + + + + ++ M P+
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
T+NL + +++ +L ++ P+ + ++ + + D A +++
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWED 411
Query: 325 MTEMGYA 331
M G+
Sbjct: 412 MVVKGFG 418
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 55/359 (15%)
Query: 95 KHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDT 154
K++ ++ ++VFR + + D ++ + + + RL M + S TGC
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 155 SVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVN 214
V IS L+S+ + AL F + + KP+IV YN ++ + G+ E
Sbjct: 257 YVLTGFIS--LYSKCGKIKMGSAL--FREFR-----KPDIVAYNAMIHGYTSNGETELSL 307
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
SLFK+L S T ++ G +I + +KSN ++ L Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC--LKSNFLSHASVS-TALTTVY 364
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
K + + ++F S EK SLP++N+M+ Y + L + A ++F++M + ++P+
Sbjct: 365 SKLNEIESARKLFD---ESPEK-SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 335 VT--------------------HE---------------SLIYMYGFCDCVSKAKELFDG 359
VT H+ +LI MY C +++A+ LFD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD- 479
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
L+ K ++ T N M+ Y ++ QEA ++F + + P T+ + A + A
Sbjct: 480 LMTKKNEV---TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG 535
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 31/320 (9%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI--SAHL---------- 165
D Y+ +I G+T L++ LF E+ +G R +S SL+ S HL
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC 345
Query: 166 -------HSRDKTK--ALAKALGYFEKMKGM--ERCKPNIVTYNIILRAFAQAGKVEQVN 214
H+ T + L E + + E + ++ ++N ++ + Q G E
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
SLF+++ +S SP+ T ++ A + G + + + ++S + + LI Y
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
K + ++F + + E T+N+M+ YG +A N+F +M G P+
Sbjct: 466 AKCGSIAEARRLFDLMTKKNE----VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
VT ++Y V + E+F+ ++ + V M+D+ Q A Q
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA---LQ 578
Query: 394 RARSIKVLPDASTYKLLYKA 413
++ + P +S ++ L A
Sbjct: 579 FIEAMSIEPGSSVWETLLGA 598
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE- 211
DT ++N++IS + K + +++ F + + + T IL A A+ ++
Sbjct: 184 DTILWNTMISGY----RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 212 --QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
Q++SL S D Y G + Y K G I+ A+ + KPD++ +N
Sbjct: 240 GMQIHSLATK--TGCYSHD-YVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNA 292
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
+I Y + + +FK L+ S + T S+V G L G
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIH---------G 343
Query: 330 YA--PSFVTHES----LIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINN 383
Y +F++H S L +Y + + A++LFD E + + NAM+ Y N
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL----PSWNAMISGYTQNG 399
Query: 384 LPQEADSLFQRARSIKVLPDASTYKLLYKA 413
L ++A SLF+ + + P+ T + A
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSA 429
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHL 165
F W + + + D+ Y+ ++ + G+ G+ + +F M+ G DT Y SLI
Sbjct: 109 FNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLI---- 164
Query: 166 HSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIV 225
H + + A+ +E+M+ C+P +V+Y ++ G+VE+ ++K++ S V
Sbjct: 165 HWVSSSGDVDGAMRLWEEMRD-NGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRV 223
Query: 226 SPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQ 285
SP+ +TY +M+ G E + +M+ +PD N+LI K +F +
Sbjct: 224 SPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI---AKALKFGETSF 280
Query: 286 VFKSLLRSKEKPSLPTFNSMVLNY 309
+ + L+ KE N +VL Y
Sbjct: 281 MTRVLVYMKE-------NGVVLRY 297
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 94/190 (49%), Gaps = 9/190 (4%)
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
++ + G R D+ + N ++ AH + KA +F ++ K + TY +L
Sbjct: 79 QLPHLGVRWDSHIINRVLKAH-------PPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDI 131
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
F +AG+++ + S+F + E V D TY ++ G + + M+ N C+P
Sbjct: 132 FGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPT 191
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK-DKAENVF 322
++++ + + ++ +V+K +LRS+ P+ T+ ++++ Y A K ++A ++F
Sbjct: 192 VVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTY-TVLMEYLVATGKCEEALDIF 250
Query: 323 KQMTEMGYAP 332
+M E+G P
Sbjct: 251 FKMQEIGVQP 260
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 139/334 (41%), Gaps = 30/334 (8%)
Query: 104 EVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA 163
EV++ M + R + Y+ L+ + G+ A+ +F +M+ G +PD + N LI+
Sbjct: 213 EVYKEMLRSR-VSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAK 271
Query: 164 HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD-- 221
L +T + + L Y K G+ ++ Y I + A + + L ++++
Sbjct: 272 AL-KFGETSFMTRVLVYM-KENGV------VLRYPIFVEALETLKAAGESDDLLREVNSH 323
Query: 222 ---ESIVSPDI-----YTYNGVMDAYGKRGM---------IREMEAMLTRMKSNQCKPDL 264
ES+ S DI N ++ R + + ++ +L +M+ K D
Sbjct: 324 ISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDS 383
Query: 265 ITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQ 324
+ +I++ + + + F L + +++ N+ ++ K V K+
Sbjct: 384 FVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKE 443
Query: 325 MTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNL 384
M + ++ LI+ GF A ++FD L + Q V+ A++DVY
Sbjct: 444 MVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDD--QKGVAAYTALMDVYISAGS 501
Query: 385 PQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
P++A + + R +++P TY +L K +
Sbjct: 502 PEKAMKILREMREREIMPSLGTYDVLLSGLEKTS 535
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 144/320 (45%), Gaps = 32/320 (10%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
C +V R RW + D+ ++++ L + M + G RP + LI
Sbjct: 312 CYQVMR-----RWLVKDDNWTTRVLK-------------LLNAMDSAGVRPSREEHERLI 353
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMER-CKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
A +R++ + K L +++++ ER + ++ N ++ +A K +++DL
Sbjct: 354 WAC--TREEHYIVGKEL--YKRIR--ERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDL 407
Query: 221 DESIVSPDIYTY-------NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+ P+ +Y N ++ A KRG+ R +L +M+ KP +N ++ +
Sbjct: 408 LDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVA 467
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
K + Q+FK+++ + EKP++ ++ +++ K +L D+A V+ M ++G P+
Sbjct: 468 CSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPN 527
Query: 334 FVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
+ ++ + + L + ++ V T NA++ N L A F
Sbjct: 528 LYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFH 587
Query: 394 RARSIKVLPDASTYKLLYKA 413
R +S V P+ TY++L +A
Sbjct: 588 RMKSENVEPNEITYEMLIEA 607
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 137/313 (43%), Gaps = 20/313 (6%)
Query: 34 FGSIPTRPKRKKTNDDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEEL 93
G I + R+ DD+ T +++LL S VR R EH L++
Sbjct: 308 IGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAG----------VRPSREEHERLIWA-C 356
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
+ + ++ E+++ + ++R+ V + LI +MGK + A+ ++ ++ + G P+
Sbjct: 357 TREEHYIVGKELYKRI-RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPN 415
Query: 154 TSVYNSLISAH---LHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAG 208
Y ++S L + K + KM KG+ KP +N +L A ++A
Sbjct: 416 NLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGL---KPQRRHWNAVLVACSKAS 472
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
+ +FK + ++ P + +Y ++ A K + E + M +P+L +
Sbjct: 473 ETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYT 532
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+ +Q+F+ ++ + K + +PS+ TFN+++ + L A F +M
Sbjct: 533 TMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSE 592
Query: 329 GYAPSFVTHESLI 341
P+ +T+E LI
Sbjct: 593 NVEPNEITYEMLI 605
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
D +YS LIS + K G++ + EM GC+PDT YN LI+ D A +
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA-NR 314
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
L + KG+ KP++++YN+IL F + K E+ LF+D+ SPD +Y V
Sbjct: 315 VLDEMVE-KGL---KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
D + E +L M KP + + + + + +V SL R
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRG 427
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D Y+ LI + G A+ LF EM +P + +LI H K + +A
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI----HGLCKDSRVKEA 206
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L M + +P + Y +++A Q G++ L + E + D Y+ ++
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ K G E+ +L M CKPD +T+N+LI+ + + + +V ++ KP
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCD 348
+ ++N ++ + + + ++A +F+ M G +P +++ I G C+
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR--IVFDGLCE 375
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y+ LI + + G+ A L E + D ++Y++LIS+ + + ++ ++ L
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA-GRSNEVSMIL-- 281
Query: 181 FEKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
E+M KG CKP+ VTYN+++ F E N + ++ E + PD+ +YN ++
Sbjct: 282 -EEMSEKG---CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + E + M C PD +++ ++ D + QF++ + +L KP
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 127/305 (41%), Gaps = 21/305 (6%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
++ +I+ G+ A+ +F EM C+ + S + + G
Sbjct: 85 IFCNVINFFGRGKLPSRALHMFDEMPQYRCQ-----------RTVKSLNSLLSALLKCGE 133
Query: 181 FEKMKGM-----ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
EKMK E KP+ TYNI++ +Q+G + LF ++ + V P T+ +
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTL 193
Query: 236 MDAYGKRGMIREMEAMLTRM-KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
+ K ++E M M K +P + + LI + + + ++ K
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSK 352
K +++++ + KA ++ + ++M+E G P VT+ LI GFC +
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLIN--GFCVENDSES 311
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
A + D +VE ++ V + N +L V+ +EA LF+ PD +Y++++
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 413 AYTKA 417
+
Sbjct: 372 GLCEG 376
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 3/195 (1%)
Query: 247 EMEAMLTRMKSNQ--CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
E+E M R+ S KPD T+N+LI + FD ++F +++ K KP+ TF +
Sbjct: 133 ELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 305 MVLNYGK-ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES 363
++ K +R+K+ + + G P+ + SLI +S A +L D E
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXX 423
K+++ + + ++ E + + PD TY +L + N
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 424 XXXXXXXXXXGIIPN 438
G+ P+
Sbjct: 313 NRVLDEMVEKGLKPD 327
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
+F G D N LI S + AL + L F + K +PN++T++ +
Sbjct: 189 IFVSAPKLGVEIDACCLNILIKGLCESGNLEAAL-QLLDEFPQQKS----RPNVMTFSPL 243
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+R F GK E+ L + +++ + PD T+N ++ K+G + E +L RMK C
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+P+ T+ ++ K++ + +++ ++ +PS ++ MVL + + + +
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Query: 321 VFKQMTEMGYAP 332
V +QM G+ P
Sbjct: 364 VLRQMVNHGFVP 375
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 88 LLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGK-KGQTRLAMWLFSEMR 146
L+ + G+ + EV R ++ ++ + L+ + G G+ A+ + M
Sbjct: 100 LMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMP 159
Query: 147 NTGCRPDTS----VYNSLISAHLHSR-DKTKALAKALGYFEKMKGMERCKPNIVTYNIIL 201
+ GC P + + N L+SA L K A LG + + NI++
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLG----------VEIDACCLNILI 209
Query: 202 RAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCK 261
+ ++G +E L + + P++ T++ ++ + +G E +L RM+ + +
Sbjct: 210 KGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
PD ITFN+LI KK + ++ + + + +P+ T+ ++ + +A+ +
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDCVS 351
QM G PSF++++ ++ G C+ S
Sbjct: 330 MSQMISWGMRPSFLSYKKMV--LGLCETKS 357
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKAL 174
AD Y+ +I + KG +A L EM G PD Y S+I+ + ++ D L
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE----SIVSPDIY 230
AK + + C N VTY+ IL ++G +E+ L ++++ ++SP+
Sbjct: 223 AKEMSKHD-------CVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAV 275
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK-MEQVFKS 289
TY V+ A+ ++ + E +L RM + C P+ +T +LI + + K + ++
Sbjct: 276 TYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDK 335
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
L++ F+S ++ + + ++AE +F+ M G P
Sbjct: 336 LVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGV 235
+AL K C + V YN+++R FA G + + L K++D + PD+ TY +
Sbjct: 148 EALWVLRKFPEFNVC-ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 236 MDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE 295
++ Y G I + + M + C + +T++ +++ K ++ ++ + +
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 296 ----KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
P+ T+ ++ + + R ++A V +M G P+ VT LI
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDL---DESIVSPDIYTYNGVMDAYGKRGMIREM 248
P+ Y +++ + + G+V + + + D+ PD TY V+ A+ G++
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 249 EAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVL 307
+L M + IT+N+L+ Y K+ Q D+ E + + + +P + ++N ++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII- 530
Query: 308 NYGKARLKDKAENV--FKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV-ESK 364
G + D A + F +M G AP+ +++ +L+ + A +FD ++ + +
Sbjct: 531 -DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 365 VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
V++ + N +++ YC L ++A + R + P+ +TY L ++A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEM-RNTGCRPDTSVYNSLISAHLHSRDKTKALA 175
A+ Y+ L+ K+ Q A L EM + G PD YN +I + D A
Sbjct: 485 ANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS----A 540
Query: 176 KALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL-DESIVSPDIYTYNG 234
AL +F +M+ P ++Y +++AFA +G+ + N +F ++ ++ V D+ +N
Sbjct: 541 GALAFFNEMR-TRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL---- 290
+++ Y + G+I + + +++RMK N P++ T+ L + + ++ ++K +
Sbjct: 600 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERC 659
Query: 291 -LRSKEKPS 298
++ KE PS
Sbjct: 660 AVKKKEAPS 668
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
LE R Q R D Y+ ++S G A + +EM G + YN L+
Sbjct: 437 LEAMR-RQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLK 495
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ K + +A +M +P++V+YNII+ + F ++
Sbjct: 496 GYC----KQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRT 551
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN-QCKPDLITFNLLIDSYGKKQQFD 281
++P +Y +M A+ G + + M ++ + K DLI +N+L++ Y + +
Sbjct: 552 RGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIE 611
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTE 327
++V + + P++ T+ S+ +AR A ++K++ E
Sbjct: 612 DAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 34/309 (11%)
Query: 122 YSKLISVMGKKGQTRLAMWLF------------SEMRNTGCRPDTSVYNSLISAHLHSRD 169
Y+ LI G++GQ A LF E R C+ S +NS+I A+L
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS-WNSMIKAYL---- 292
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K + A F++MK + +++N ++ + ++E +LF ++ + D
Sbjct: 293 KVGDVVSARLLFDQMK-----DRDTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDA 343
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+++N ++ Y G + + +++N +I +Y K + + + +F
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHT----VSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ EKP T S+ L+ + + Q+ P H +LI MY C
Sbjct: 400 MNIEGEKPDPHTLTSL-LSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGE 458
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+ +++ +FD E K++ +V T NAM+ Y + EA +LF +S + P T+
Sbjct: 459 IMESRRIFD---EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
Query: 410 LYKAYTKAN 418
+ A A
Sbjct: 516 VLNACAHAG 524
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 58 RLLTRKISDKEPLE--RTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWY 115
RLL ++ D++ + ++ YV + R E F LF E+ P + W Y
Sbjct: 301 RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM-------PNRDAHSWNMMVSGY 353
Query: 116 MADNGV-----------------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYN 158
+ V ++ +I+ K + A+ LF M G +PD
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 159 SLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFK 218
SL+SA T + LG ++ P++ +N ++ +++ G++ + +F
Sbjct: 414 SLLSA------STGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIF- 466
Query: 219 DLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQ 278
DE + ++ T+N ++ Y G E + MKSN P ITF ++++
Sbjct: 467 --DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Query: 279 QFDKMEQVFKSLLRS-KEKPSLPTFNSMV-LNYGKARLKDKAENVFKQMTEMGYAP 332
D+ + F S++ K +P + ++S+V + G+ + E +T M + P
Sbjct: 525 LVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF----EEAMYIITSMPFEP 576
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 31/265 (11%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
A LFSEM N D +N ++S + + A YFEK + + V++
Sbjct: 331 AFALFSEMPNR----DAHSWNMMVSGYA----SVGNVELARHYFEKTP-----EKHTVSW 377
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM-LTRMK 256
N I+ A+ + ++ LF ++ PD +T ++ A G++ M + ++
Sbjct: 378 NSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA--STGLVNLRLGMQMHQIV 435
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKD 316
PD+ N LI Y + + + ++F + K K + T+N+M+ Y
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNAS 492
Query: 317 KAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAM 375
+A N+F M G PS +T S++ V +AK F ++ K++ ++ +++
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 376 LDV-----------YCINNLPQEAD 389
++V Y I ++P E D
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPD 577
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 40/307 (13%)
Query: 85 HCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
H L +L K ++ + V M + D Y+ L++ + K+G AM L +
Sbjct: 108 HSTQLLYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEK 166
Query: 145 MRNTGCRPDTSVYNSLI-----------SAHLHSRDKTKALA--------------KALG 179
M + G +T YN+L+ S R K LA K G
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 180 YFEKMKGMERC-----KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNG 234
E +K ++ +PN+V+YN++L F + G+ + +LF++L ++ +YN
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
++ G E ++L M P ++T+N+LI+S + ++ QV K + +
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 295 E--KPSLPTFNSMVLNYGKARL--KDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV 350
+ + ++N ++ ARL + K + V K + EM Y + + C+
Sbjct: 347 HQFRVTATSYNPVI-----ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHN 401
Query: 351 SKAKELF 357
SK +E F
Sbjct: 402 SKVQEAF 408
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 153/364 (42%), Gaps = 57/364 (15%)
Query: 93 LGKHDKWLPCLEVFRWMQKQRWYMADNG-VYSKLISVMGKKGQTRLAMWLFSEMRNTGCR 151
LG ++ L +E R MQK +A N YS L+ K+ T A+ L E+ G
Sbjct: 189 LGSLNQSLQFVE--RLMQKG---LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILRAFAQAGK 209
P+ YN L++ K A+ F ++ KG K N+V+YNI+LR G+
Sbjct: 244 PNLVSYNVLLTGFC----KEGRTDDAMALFRELPAKGF---KANVVSYNILLRCLCCDGR 296
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK--SNQCKPDLITF 267
E+ NSL ++D +P + TYN ++++ G + +L M ++Q + ++
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSY 356
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM-------------------VLN 308
N +I K+ + D + + ++ + KP+ T+N++ + N
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSN 416
Query: 309 YGKARLKD----------KAENVFK------QMTEMGYAPSFVTHESLIYMYGFC--DCV 350
K D + N F +MT G+ P T+ +LI G C
Sbjct: 417 KQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR--GLCLEGMF 474
Query: 351 SKAKELFDGLVESK-VQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+ A E+ + ES+ + V NAM+ C A +F+ K +P+ +TY +
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAI 534
Query: 410 LYKA 413
L +
Sbjct: 535 LVEG 538
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 134/339 (39%), Gaps = 31/339 (9%)
Query: 53 TRELVRLLTRKI-SDKEP----LERTLNKYVRLVRTEHCFLLFEELG---------KHDK 98
T E V+LL I EP L + + RT+ LF EL ++
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 99 WLPCLEV-FRWMQKQRWYMADNG--------VYSKLISVMGKKGQTRLAMWLFSEMR--N 147
L CL RW + +G Y+ LI+ + G+T A+ + EM N
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
R + YN +I A L K + K L ++M RCKPN TYN I
Sbjct: 347 HQFRVTATSYNPVI-ARLCKEGKVDLVVKCL---DEMI-YRRCKPNEGTYNAIGSLCEHN 401
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITF 267
KV++ + + L Y V+ + ++G +L M PD T+
Sbjct: 402 SKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTY 461
Query: 268 NLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ LI + F +V + S+ KP++ FN+M+L K R D A VF+ M
Sbjct: 462 SALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMV 521
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKV 365
E P+ T+ L+ D + AKE+ D L KV
Sbjct: 522 EKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
KPN+ +L +A ++++ + + + S + PD Y +++ KRG +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
++ +M+ + + +T+N L+ ++ Q + L++ P+ T++ ++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDGLVESKVQIK 368
K R D+A + ++ G P+ V++ L + GFC A LF L +
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVL--LTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 369 VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
V + N +L C + +EA+SL P TY +L
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 15/298 (5%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
YS L+S+ + G++ LA+ ++ EM N ++ISA K + AL F
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISAC----TKEEKWDLALKIF 307
Query: 182 EKM--KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+ M KGM KPN+V N ++ + +AGKV V ++ L PD YT+N ++ A
Sbjct: 308 QSMLKKGM---KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTAL 364
Query: 240 GKRGMIREMEAMLTRMKS-NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
K ++ + ++S N C + +N + S K ++K ++ + S S
Sbjct: 365 YKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVS 424
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
++N ++ K+R A V++ M + P+ T+ SL+ C S E+ D
Sbjct: 425 TSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS---CIWGSLWDEVED 481
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
L KV+ VS NA + C+ + A L+ + R + + PD T ++ + K
Sbjct: 482 IL--KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 15/281 (5%)
Query: 123 SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
SK + + + + R A+ LF MR G +P+ NS +S L + D + KA FE
Sbjct: 111 SKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGD----IQKAFTVFE 166
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP------DIYTYNGVM 236
M+ E + TY+++L+A A+ E +F++L+ P D+ YN +
Sbjct: 167 FMRKKENVTGH--TYSLMLKAVAEVKGCESALRMFRELERE---PKRRSCFDVVLYNTAI 221
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
G+ + E E + MK + IT++LL+ + + + + V+ ++ +K
Sbjct: 222 SLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKIS 281
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
+M+ K D A +F+ M + G P+ V +LI G V ++
Sbjct: 282 LREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKV 341
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARS 397
+ L + T NA+L N ++ LF RS
Sbjct: 342 YSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRS 382
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 10/191 (5%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L L K +++ L++F ++ + + +Y+ + K G A+ L EM +
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G TS YN +ISA SR K+K AL +E M CKPN TY ++R+
Sbjct: 420 GLTVSTSSYNLVISACEKSR-KSKV---ALLVYEHM-AQRDCKPNTFTYLSLVRSCIWGS 474
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
++V + K V PD+ YN + R + + + +M+ +PD T
Sbjct: 475 LWDEVEDILKK-----VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRA 529
Query: 269 LLIDSYGKKQQ 279
+++ + K Q+
Sbjct: 530 MMLQNLKKHQK 540
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 25/241 (10%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
L+ +G++G + A+ F M+ C+PD YN++I+A + KA ++M
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALC----RVGNFKKARFLLDQM 226
Query: 185 K--GMERCKPNIVTYNIILRAFAQAG-----------KVEQVNSLFKDLDESIVSPDIYT 231
+ G R P+ TY I++ ++ + G ++ + N +F+++ PD+ T
Sbjct: 227 QLPGF-RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 232 YNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
YN ++D K I + MK+ C P+ +T+N I Y + + ++ +++
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 292 R-SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV 350
+ P T+ ++ + R +A ++ +M E G P T++ + CD +
Sbjct: 346 KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV------CDAL 399
Query: 351 S 351
S
Sbjct: 400 S 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 17/240 (7%)
Query: 193 NIVT---YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
N+VT +++ + G V++ + F + E PD+Y YN +++A + G ++
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 250 AMLTRMK--SNQCKPDLITFNLLIDSYGK-----------KQQFDKMEQVFKSLLRSKEK 296
+L +M+ + PD T+ +LI SY + +++ + ++F+ +L
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
P + T+N ++ K +A +F+ M G P+ VT+ S I Y + + A E+
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 357 FDGLVESKVQI-KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+ + + ST ++ EA L ++P TYKL+ A +
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALS 400
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK 172
R ++ D Y+ LI K + A+ LF +M+ GC P+ YNS I + T
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY----SVTN 332
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
+ A+ MK + P TY ++ A + + + L ++ E+ + P YTY
Sbjct: 333 EIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Query: 233 NGVMDAYGKRGMIREM-EAMLTRMKSN 258
V DA G+ + E + RM+
Sbjct: 393 KLVCDALSSEGLASTLDEELHKRMREG 419
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 132/290 (45%), Gaps = 19/290 (6%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
Y+ +IS K G + + L M +G + D + ++ A +SR T L ++L
Sbjct: 103 YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKAS-NSRGSTMILPRSLCRL 161
Query: 182 EKMKGMERCKPNI--VTYNIILRAFAQAGKVEQVNSLFKDL-DESIVSPDIYTYNGVMDA 238
+ + +C + V ++ + ++GK+E ++F+ + DE++V ++
Sbjct: 162 VHAR-IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVV-----CCTSMISG 215
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME-QVFKSLLRSKEKP 297
Y +G + + E + K D++ +N +++ + + + K ++ S+ R+ P
Sbjct: 216 YMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP 271
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
++ TF S++ + + V Q+ + G SL+ MY C ++ A+ +F
Sbjct: 272 NISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVF 331
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
D + E V + +M+D Y N P+EA LF R + ++ P+ T+
Sbjct: 332 DQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 140/326 (42%), Gaps = 34/326 (10%)
Query: 54 RELVRLLTRKIS------DKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFR 107
R L RL+ +I D + ++ YV+ + E +FE + K + + C +
Sbjct: 156 RSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM-KDENVVCCTSMIS 214
Query: 108 WMQKQRWY-----------MADNGVYSKLISVMGKKGQT-RLAMWLFSEMRNTGCRPDTS 155
Q + + D VY+ ++ + G+T + ++ ++ M+ G P+ S
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 156 VYNSLISAH--LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
+ S+I A L S + + + + + MK +I + +L +A+ G +
Sbjct: 275 TFASVIGACSVLTSHEVGQQV-----HAQIMK--SGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+F + E +++++ ++D YGK G E + TRMK + +P+ +TF + +
Sbjct: 328 RRVFDQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 274 YGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
DK ++F+S+ R KP + + +V G+A +KA + M E +
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD 443
Query: 333 SFVTHESLIYMYGFCDCVS-KAKELF 357
+ S ++G + S A ELF
Sbjct: 444 IWAALLSSCNLHGNVELASIAASELF 469
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
L E R G +P + V +SL R + AKAL KG P +N++
Sbjct: 363 LSGEARRRGIKPFSDVIHSLC------RMRNVKDAKALLLDMISKGP---APGNAVFNLV 413
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ A ++ G +++ + K ++ + PD+YTY ++ Y K GM+ E + +L K
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK 473
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG-KARLKDKAE 319
K +T++ LI Y K +++D+ ++ + R +P+ +N ++ ++ KA +KAE
Sbjct: 474 KLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAE 533
Query: 320 NVFKQMTEMG 329
+F++M + G
Sbjct: 534 VLFEEMKQKG 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 121/308 (39%), Gaps = 32/308 (10%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVY---------------------NS 159
+ ++LI++ GK G+++ A +FS+ G P+ Y
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 160 LISAHLHSRD----------KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
L S L + K +A +E K E+ P +I G
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
+ + DL I ++ V+ + + +++ +A+L M S P FNL
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
++ + K D+ ++V K + KP + T+ ++ Y K + D+A+ + + +
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQE-A 388
S VT+ +LI Y + +A +L + + VQ N ++ +C+ L E A
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 532
Query: 389 DSLFQRAR 396
+ LF+ +
Sbjct: 533 EVLFEEMK 540
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK-ALGY 180
++ ++S K G A+ L EM G +PD +NSL+S + +K L+K A+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY-----ASKGLSKDAIAV 212
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
++M+ + KP+ + + +L+A A+ G ++ ++ + + + D+Y ++D Y
Sbjct: 213 LKRMQ-IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 241 KRG-------------------------------MIREMEAMLTRMKSNQCKPDLITFNL 269
K G ++++ EA++ RM+ KPD IT+N
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
L Y + +K V + P++ ++ ++ K A VF +M E G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 330 YAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEAD 389
P+ T +L+ + G + KE+ + + A++D+Y + Q A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 390 SLF 392
+F
Sbjct: 452 EIF 454
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 156/389 (40%), Gaps = 29/389 (7%)
Query: 65 SDKEPLERTLNKYVRLVRTEHCFLLFEELGKHD---------------KWLPCLEVFRWM 109
SD + ++ Y R V LF+E+ K D W +E+FR M
Sbjct: 21 SDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREM 80
Query: 110 QKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
Q A + KL+ V K + + G + S+ NSLI ++SR+
Sbjct: 81 QFSG-AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIV--MYSRN 137
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
L++ + F MK N+ ++N IL ++ + G V+ L +++ + PDI
Sbjct: 138 GKLELSRKV--FNSMK-----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
T+N ++ Y +G+ ++ A+L RM+ KP + + L+ + + + +
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+LR++ + +++ Y K A VF M A + V SL+ +
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSYACL 306
Query: 350 VSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL 409
+ A+ L + + ++ T N++ Y P++A + + + V P+ ++
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 410 LYKAYTKANSXXXXXXXXXXXXXXGIIPN 438
++ +K + G+ PN
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 158/365 (43%), Gaps = 28/365 (7%)
Query: 56 LVRLLTRKISDKEPLERTLNKYVRLVRTE--HCFLLFEELGKHDKWLPCLEVFRWMQKQR 113
L L+ R S + ER+L Y R++ + H F L K L E + Q
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 114 WYMA-DNGVYS--KLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
+ +N VY+ LI+ G +LA LF + PD +NS+I ++ K
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYV----K 193
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
+ AL F KM + N +++ ++ + QA ++ LF ++ S V PD
Sbjct: 194 AGKMDIALTLFRKMA-----EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
+ + A + G + + + + + + + + D + +LID Y K + ++ +VFK++
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCV 350
+K S+ + +++ Y +A + F +M +MG P+ +T +++ + V
Sbjct: 309 ----KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 351 SKAKELFDGLVESKVQIK--VSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
+ K +F + E +K + ++D+ L EA Q + + P+A +
Sbjct: 365 EEGKLIFYSM-ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE---MPLKPNAVIWG 420
Query: 409 LLYKA 413
L KA
Sbjct: 421 ALLKA 425
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 25/304 (8%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+ +F M Q ++ +S G R+ + + G ++SV NS+IS
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ S D+ + +A FE + + N+V+YN L + EQ L ++ E
Sbjct: 417 MFVKS-DRMEDAQRA---FESLS-----EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
+ +T+ ++ G IR+ E + +++ + N LI Y K D
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIY 342
+VF + E ++ ++ SM+ + K + F QM E G P+ VT+ +++
Sbjct: 528 ASRVFNFM----ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Query: 343 MYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAMLDVYC-----------INNLPQEADS 390
VS+ F+ + E K++ K+ M+D+ C IN +P +AD
Sbjct: 584 ACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADV 643
Query: 391 LFQR 394
L R
Sbjct: 644 LVWR 647
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 21/198 (10%)
Query: 48 DDDSETRELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFR 107
D DS LV +++ + K P RTL+K L + L +HDK ++ +
Sbjct: 342 DPDSAVEFLVYMVS---TGKLPAIRTLSK------------LSKNLCRHDKSDHLIKAYE 386
Query: 108 WMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS 167
+ + Y ++ YS +IS + K G+ R + EM+ G PD S+YN+LI A
Sbjct: 387 LLS-SKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC-- 443
Query: 168 RDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
K + + A +++M +E CK N+ TYN+++R ++ G+ E+ LF + E + P
Sbjct: 444 --KAEMIRPAKKLWDEM-FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 228 DIYTYNGVMDAYGKRGMI 245
D Y +++ K I
Sbjct: 501 DETIYMSLIEGLCKETKI 518
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 145 MRNTGCRPDTSVYNSLISAHLHSRDKTKALAKAL------GYFEKMKGMERCKPNIVTYN 198
M +TG P + L S +L DK+ L KA GYF +++ +Y+
Sbjct: 353 MVSTGKLPAIRTLSKL-SKNLCRHDKSDHLIKAYELLSSKGYFSELQ----------SYS 401
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
+++ +AG+V + + +++ + ++PD+ YN +++A K MIR + + M
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
CK +L T+N+LI ++ + ++ ++F +L +P + S++ K + A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 319 ENVFKQMTE 327
VF++ E
Sbjct: 522 MEVFRKCME 530
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 12/316 (3%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMG----KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
F W Q Y + Y+++I ++ K Q R+ + + M+ R + +V +
Sbjct: 146 FTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMK----RNNKTVVLVDV 201
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ + + L + ++ + + +P I +N++L A + G V++ +L + +
Sbjct: 202 LLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR 261
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
V PD T+N + + + ++ +L M KP+ T+ ID++ + D
Sbjct: 262 HR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK---QMTEMGYAPSFVTHE 338
+ +F ++ S PT + L DKAE F+ +M G P T++
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 339 SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSI 398
+I + V +A + D + + T N L V C N EA L+ R
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVES 440
Query: 399 KVLPDASTYKLLYKAY 414
+ P TY +L +
Sbjct: 441 RCAPSVQTYNMLISMF 456
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIV 195
AM L EM G +P+ Y + I + + +A F+ M KG P
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQA----GMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 196 TYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM 255
T+ +++ A A+ K E+ L + + PD+ TY V++ + E L M
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 256 KSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLK 315
+ PD++T+N + + ++ D+ +++ ++ S+ PS+ T+N ++ + +
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
D A N + +M + T+ ++I G DC +AKE
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMI--NGLFDC-HRAKE 499
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+ P TYN ++D + K+ + + + ML M S C PD++TF+ LI+ Y K ++ D
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
++F + R + T+ +++ + + D A+++ +M G AP ++T + +
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM--LA 123
Query: 345 GFC 347
G C
Sbjct: 124 GLC 126
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 262 PDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENV 321
P IT+N +ID + K+ + D +++ S+ P + TF++++ Y KA+ D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 322 FKQMTEMGYAPSFVTHESLIYMYGFCDC--VSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
F +M G + VT+ +LI +GFC + A++L + ++ V T + ML
Sbjct: 68 FCEMHRRGIVANTVTYTTLI--HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 380 C 380
C
Sbjct: 126 C 126
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
P T YNS+I +D+ + L KG C P++VT++ ++ + +A +V+
Sbjct: 8 PTTITYNSMIDGFC-KQDRVDDAKRMLDSMAS-KG---CSPDVVTFSTLINGYCKAKRVD 62
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
+F ++ + + TY ++ + + G + + +L M S PD ITF+ ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 272 DSYGKKQQFDKMEQVFKSLLRSKE 295
K++ K + + L +S++
Sbjct: 123 AGLCSKKELRKAFAILEDLQKSED 146
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 127/333 (38%), Gaps = 48/333 (14%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH----------------- 164
Y+ LI + A++LF+ M G RP+ N ++ A
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 165 ------------------LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
+ S K + +AL +++M + + V YN+I+R
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS-QKNVPADSVVYNVIIRGLCS 312
Query: 207 AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLIT 266
+G + D+ + V+PD++TYN ++ A K G E + M++ PD I+
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
+ ++I ++ + S+L+S P + +N ++ YG+ A +V M
Sbjct: 373 YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLML 432
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDG------LVESKVQIKVSTLNAMLDVYC 380
G P+ T+ +LI+ Y K L D + +K+ +T N +L C
Sbjct: 433 SYGVKPNVYTNNALIHGY------VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+ A L+ PD TY L +
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRG 519
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 18/325 (5%)
Query: 103 LEVFRWMQKQRWYMADNGV------YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV 156
L+ W++K+ Y +GV ++ L++ + K G A L EMR G P+
Sbjct: 137 LDAALWLRKKMIY---SGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 157 YNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNS- 215
YN+LI + KAL Y +PN VT NII+ A Q G + N
Sbjct: 194 YNTLIKGLCSVNNVDKAL-----YLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 216 -LFKDLDESIVSP--DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
L + LD S + DI +MD+ K G + + + M D + +N++I
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 273 SYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP 332
+++ P + T+N+++ K D+A ++ M G AP
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
++++ +I V++A E +++S + +V N ++D Y A S+
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVL 428
Query: 393 QRARSIKVLPDASTYKLLYKAYTKA 417
S V P+ T L Y K
Sbjct: 429 NLMLSYGVKPNVYTNNALIHGYVKG 453
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+++ +I G+ G T A+ + + M + G +P+ N+LI H K L A
Sbjct: 407 LWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI----HGYVKGGRLIDAWWV 462
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
+M+ + P+ TYN++L A G + L+ ++ PDI TY ++
Sbjct: 463 KNEMRS-TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+G +++ E++L+R+++ D + F +L Y + Q+ + V+K L ++ +
Sbjct: 522 WKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA--HLHSRDKTKALAKAL 178
+++ +IS K G R A+ +F EM N RPDT S ISA + S ++ +++ + +
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 179 G----------------YFEKMKGMERCK--------PNIVTYNIILRAFAQAGKVEQVN 214
G F K +E + ++V ++ ++ + G+ +
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 215 SLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSY 274
SL++ ++ V P+ T+ G++ A GM+RE RM ++ P + +ID
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLL 469
Query: 275 GKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSF 334
G+ D+ +V K + +P + + +++ K R + E +Q+ + PS
Sbjct: 470 GRAGHLDQAYEVIKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID--PSN 524
Query: 335 VTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
H Y + A L+D + E +V++K LN DV C
Sbjct: 525 TGH------YVQLSNLYAAARLWDRVAEVRVRMKEKGLNK--DVGC 562
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 123/313 (39%), Gaps = 48/313 (15%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD------------ 169
++ ++S + G+ A+ +FS+MR +PD S+++A +D
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 170 -------------------KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
K +A A F+KMK PN++ +N ++ +A+ G
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAKNGYA 304
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
+ +F ++ V PD + + A + G + + +M + + + D+ + L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
ID + K + VF L + +++M++ YG +A ++++ M G
Sbjct: 365 IDMFAKCGSVEGARLVFDRTL----DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY-CINNLPQEAD 389
P+ VT L+ V + F+ + + K+ N Y C+ +L A
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI-------NPQQQHYACVIDLLGRAG 473
Query: 390 SLFQRARSIKVLP 402
L Q IK +P
Sbjct: 474 HLDQAYEVIKCMP 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D+ + L+ ++ ++ +++ G D V N LI+ + K + L A
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA----KCRRLGSA 173
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
FE + ER IV++ I+ A+AQ G+ + +F + + V PD V++
Sbjct: 174 RTVFEGLPLPER---TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 238 A-----------------------------------YGKRGMIREMEAMLTRMKSNQCKP 262
A Y K G + + + +MKS P
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----P 286
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
+LI +N +I Y K + +F ++ +P + S + + ++A +++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 323 KQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCIN 382
+ + Y +LI M+ C V A+ +FD ++ V + +AM+ Y ++
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV----WSAMIVGYGLH 402
Query: 383 NLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+EA SL++ V P+ T+ L A
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 37/332 (11%)
Query: 106 FRWMQKQR--WYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL--I 161
+M+K R Y + VY++LI G+ +L + M+ P S Y+ L +
Sbjct: 186 LEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKL 245
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERC--KPNIVTYNIILRAFAQAGKVEQVNSLFKD 219
A+ H+ D G + GM++ +PN V+Y I+ A A A + ++
Sbjct: 246 EANEHNID---------GVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEE 296
Query: 220 LDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS-NQCKPDLITFNLLIDSYGKKQ 278
+++SI + T + +M YG+ G +E+ ++ + + ++ L +++ +
Sbjct: 297 IEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSK--SYLLATEAFARVG 354
Query: 279 QFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHE 338
D+ E+++ + K FNS++ Y K L +KA VF++MT G+ P+ +T+
Sbjct: 355 NLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYR 414
Query: 339 SLIYMYGFCDCVSKAKELFDGL--VESKVQIKVS-----------TLNAMLDVYCINNLP 385
L C +KAK + + L +E + +K S T ++++ +
Sbjct: 415 HLA-----LGC-AKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDV 468
Query: 386 QEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ ++ LF+ ++ K A Y L+KAY KA
Sbjct: 469 ENSEKLFEEVKNAKYNRYAFVYNALFKAYVKA 500
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 133/317 (41%), Gaps = 6/317 (1%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRN--TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFE 182
LI + G + A+ F R+ C+ T + L+ L + K + +A Y E
Sbjct: 179 LIRRYARAGMVQQAIRAFEFARSYEPVCKSATEL--RLLEVLLDALCKEGHVREASMYLE 236
Query: 183 KMKGMERCK--PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
++ G P++ +NI+L + ++ K++Q L++++ V P + TY +++ Y
Sbjct: 237 RIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
+ ++ +L MK + + + + FN +ID G+ + + + + + P++
Sbjct: 297 RMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIV 356
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T+NS+V N+ KA A + K M G P+ T+ + + + L+ L
Sbjct: 357 TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL 416
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSX 420
+E+ T + +L + C + A + + ++ + PD T +L +
Sbjct: 417 IEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEML 476
Query: 421 XXXXXXXXXXXXXGIIP 437
GIIP
Sbjct: 477 EEAFEEFDNAVRRGIIP 493
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 136/293 (46%), Gaps = 17/293 (5%)
Query: 139 MWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG-YFEKMKGMERCKPNIV-- 195
M L S + +P ++ SL + ++S K + A F++++ E N+V
Sbjct: 116 MLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDE--GSNLVSA 173
Query: 196 -TYNIILRAFAQAGKVEQVNSLFKDLD--ESIV--SPDIYTYNGVMDAYGKRGMIREMEA 250
T+ +++R +A+AG V+Q F+ E + + ++ ++DA K G +RE
Sbjct: 174 DTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASM 233
Query: 251 MLTR----MKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV 306
L R M SN P + FN+L++ + + ++ + E++++ + KP++ T+ +++
Sbjct: 234 YLERIGGTMDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLI 292
Query: 307 LNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQ 366
Y + R A V ++M +F+ +I G +S+A + + +
Sbjct: 293 EGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG 352
Query: 367 IKVSTLNAMLDVYC-INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ T N+++ +C +LP A + + + V P +TY +K ++K N
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPG-ASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 27/288 (9%)
Query: 99 WLPCLEVFR-----WMQKQRWYMADN--------------GVYSKLISVMGKKGQTRLAM 139
W+P + +F W + ++ A+ Y LI + + ++AM
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 140 WLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNI 199
+ EM+ + V+N +I + L++ALG E+ E P IVTYN
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDG----LGEAGRLSEALGMMERFFVCE-SGPTIVTYNS 360
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
+++ F +AG + + + K + V P TYN + K E + ++
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAE 319
PD +T++L++ + + QV K + P L T ++ + + ++A
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Query: 320 NVFKQMTEMGYAPSFVTHESL---IYMYGFCDCVSKAKELFDGLVESK 364
F G P ++T + + + G D + L L SK
Sbjct: 481 EEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSK 528
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E+FR M QR + + Y+ LI + + G +A +F EM + G PD YN L+
Sbjct: 1 MELFREMS-QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 163 AHLHSRDKTKALAKALGYFE---------KMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
+ KAL G E +KG+ KPN+VTY ++ F + G E+
Sbjct: 60 GLCKNGKLEKALVA--GKVEDGWDLFCSLSLKGV---KPNVVTYTTMISGFCKKGFKEEA 114
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLID 272
+LF+ + E PD TYN ++ A+ + G ++ M+S + D T+ L+ D
Sbjct: 115 YTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 139 MWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYN 198
M LF EM G +T Y +LI + D A F++M + P+I+TYN
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE----IFKEMVS-DGVPPDIMTYN 55
Query: 199 IILRAFAQ---------AGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
I+L + AGKVE LF L V P++ TY ++ + K+G E
Sbjct: 56 ILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAY 115
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSY 274
+ +MK + PD T+N LI ++
Sbjct: 116 TLFRKMKEDGPLPDSGTYNTLIRAH 140
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 193 NIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA-- 250
N VTY +++ QAG + +FK++ V PDI TYN ++D K G + +
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 251 -------MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFN 303
+ + KP+++T+ +I + KK ++ +F+ + P T+N
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 304 SMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTH 337
+++ + + K + + K+M +A T+
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYG 275
LF+++ + + + TY ++ + G + + M S+ PD++T+N+L+D
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 276 KKQQFDKME---------QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
K + +K +F SL KP++ T+ +M+ + K K++A +F++M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 327 EMGYAPSFVTHESLI 341
E G P T+ +LI
Sbjct: 123 EDGPLPDSGTYNTLI 137
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMY 344
++F+ + + + T+ +++ +A D A+ +FK+M G P +T+ I +
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYN--ILLD 59
Query: 345 GFCDCVSKAKELFDGLVESK-----------VQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
G C K L G VE V+ V T M+ +C +EA +LF+
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 394 RARSIKVLPDASTYKLLYKAYTK 416
+ + LPD+ TY L +A+ +
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLR 142
>AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360
REVERSE LENGTH=849
Length = 849
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 150/397 (37%), Gaps = 61/397 (15%)
Query: 70 LERTLNKYVRLVRTE-------HCFLLFE-ELGKHDKWLPCLEVFRWMQKQRWYMADNGV 121
L R LN + VR E HC + E E G V+RWM +Q WY D G+
Sbjct: 189 LVRLLNAQKKWVRQEDATYISVHCMRIRENETG--------FRVYRWMTQQNWYRFDFGL 240
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+KL +GK+ + +F ++ N G P S ++ L+ A+L S L +A +
Sbjct: 241 TTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVY 300
Query: 182 EKMKGMERCKPNIVTYNIILRAFA--QAG----KVEQVNSLFKDLDES--IVSPDIYT-- 231
+M + KP + +N + RA Q G +++Q +F ++ + V DIY+
Sbjct: 301 NRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGL 360
Query: 232 ---------------------------------YNGVMDAYGKRGMIREMEAMLTRMKSN 258
++ AY K G + E+E +
Sbjct: 361 IWLHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDL 420
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
C F I++Y K F K ++F+ + + ++ ++ ++ K + +
Sbjct: 421 DCGIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELV 480
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
E + K+ E G P + + MY K + F +E K Q N LD
Sbjct: 481 ETLMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLE-KCQPSQPIYNIYLDS 539
Query: 379 YC-INNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
I NL + D + + + A + L K Y
Sbjct: 540 LTKIGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGY 576
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
VY+KLIS + G + M P +Y +I ++ + +A
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYC----I 305
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
F+ +K + P+ V Y ++R F + G + L+ ++ + + P+ + YN ++ +
Sbjct: 306 FKNLKD-KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
KRG I +EA M N +++ N +I + + D+ ++FK++ + P+
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
T+N+++ + K +K ++K++ +G PS + + +L+ D V+ + L
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
K + Y D VY+ +I +KG A L+ EM G RP+ YN +I H H +
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI--HGHFKRG 367
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
+L +A Y E ++ +++ N +++ F GK ++ +FK++ E+ V+P+
Sbjct: 368 EISLVEAF-YNEMLR--NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
TYN ++ + K + + + +K+ KP + + L+
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/293 (17%), Positives = 119/293 (40%), Gaps = 7/293 (2%)
Query: 126 ISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMK 185
+ + ++G A+ +++ +++ G NS++ L +R + ++E K
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDR-------FWELHK 204
Query: 186 GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMI 245
M + + ++RA G V + L K + + P Y Y ++ + + G
Sbjct: 205 EMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNY 264
Query: 246 REMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSM 305
M +L M + P + + +I ++ + +FK+L P + +M
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 306 VLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKV 365
+ + + A ++ +M + G P+ + +I+ + +S + ++ ++ +
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 366 QIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+ + N M+ +C + EA +F+ V P+A TY L K + K N
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 125/291 (42%), Gaps = 23/291 (7%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV--YNSLISAHLHSRDKTKALAKALGYFE 182
L+ + K G A +F EM D SV Y S+I+ + + +A+ FE
Sbjct: 337 LLDMYSKCGDLDSAKAVFREM------SDRSVVSYTSMIAGYA----REGLAGEAVKLFE 386
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
+M+ E P++ T +L A+ +++ + + + E+ + DI+ N +MD Y K
Sbjct: 387 EME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPT 301
G ++E E + + M+ D+I++N +I Y K ++ +F LL K P T
Sbjct: 446 GSMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLV 361
++ DK + + GY SL+ MY C + A LFD +
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 362 ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY-KLLY 411
+ + M+ Y ++ +EA +LF + R + D ++ LLY
Sbjct: 562 SK----DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 148 TGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQA 207
+G SV NSL++ +L K + + A F++M ER +++++N I+ +
Sbjct: 224 SGFGERNSVGNSLVAFYL----KNQRVDSARKVFDEMT--ER---DVISWNSIINGYVSN 274
Query: 208 GKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLT-RMKSNQCKPDLIT 266
G E+ S+F + S + D+ T V +I A+ + +K+ + D
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 267 FNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT 326
N L+D Y K D + VF R S+ ++ SM+ Y + L +A +F++M
Sbjct: 335 -NTLLDMYSKCGDLDSAKAVF----REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 327 EMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQ 386
E G +P T +++ + + K + + + E+ + + NA++D+Y Q
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 387 EADSLFQRARSIKVLPDASTYKLLYKAYTK 416
EA+ +F R + D ++ + Y+K
Sbjct: 450 EAELVFSEMR----VKDIISWNTIIGGYSK 475
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 22/283 (7%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERC 190
K G A LF +++ D + S+I +L + D +++A G F+K+
Sbjct: 380 KNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGD----VSRAFGLFQKLH----- 427
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
+ VT+ +++ Q + SL D+ + P TY+ ++ + G + + +
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 251 MLTRM-KSNQC-KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN 308
+ + K+ C PDLI N L+ Y K + ++F +++ ++NSM++
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT----VSWNSMIMG 543
Query: 309 YGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES-KVQI 367
L DKA N+FK+M + G P+ VT ++ +++ ELF + E+ +Q
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
+ +M+D+ +EA+ ++ PD + Y L
Sbjct: 604 GIDHYISMIDLLGRAGKLKEAEEFIS---ALPFTPDHTVYGAL 643
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y L++ G + + +F++M++ G + ++ LH R K +A L
Sbjct: 231 LYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQML--LLHKRIDRKKIADVLLL 288
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
EK E KP+++TY I++ + + + + + + V D T Y
Sbjct: 289 MEK----ENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYS 344
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G+ + E +L M+ + + F L+ Y + D++++++K + KP
Sbjct: 345 GAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI---CESKPYFE 401
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+ + +GK +AE +F+++ +M S T+ L+ +Y +SK K+L +
Sbjct: 402 ESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRM 461
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
ES +I+ +T +A++ +Y ++ADSL +A
Sbjct: 462 AESGCRIEATTWDALIKLYVEAGEVEKADSLLDKA 496
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 183 KMKGMER---CKPNI-------VTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
K++G+E+ C I V Y +L AG V++ +F + + +T
Sbjct: 208 KIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTC 267
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++ + KR +++ +L M+ KP L+T+ +LID G MEQ+ +++
Sbjct: 268 DQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKD 326
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ T +Y A LKDKAE V K+M + + L+ +Y +
Sbjct: 327 EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDE 386
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
K ++ + ESK + S A + + N QEA+++F++ + +STY +L +
Sbjct: 387 VKRIWK-ICESKPYFEESL--AAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 413 AYT 415
Y
Sbjct: 444 VYV 446
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y L++ G + + +F++M++ G + ++ LH R K +A L
Sbjct: 231 LYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQML--LLHKRIDRKKIADVLLL 288
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
EK E KP+++TY I++ + + + + + + V D T Y
Sbjct: 289 MEK----ENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYS 344
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G+ + E +L M+ + + F L+ Y + D++++++K + KP
Sbjct: 345 GAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI---CESKPYFE 401
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+ + +GK +AE +F+++ +M S T+ L+ +Y +SK K+L +
Sbjct: 402 ESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRM 461
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
ES +I+ +T +A++ +Y ++ADSL +A
Sbjct: 462 AESGCRIEATTWDALIKLYVEAGEVEKADSLLDKA 496
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 183 KMKGMER---CKPNI-------VTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
K++G+E+ C I V Y +L AG V++ +F + + +T
Sbjct: 208 KIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTC 267
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++ + KR +++ +L M+ KP L+T+ +LID G MEQ+ +++
Sbjct: 268 DQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKD 326
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ T +Y A LKDKAE V K+M + + L+ +Y +
Sbjct: 327 EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDE 386
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
K ++ + ESK + S A + + N QEA+++F++ + +STY +L +
Sbjct: 387 VKRIWK-ICESKPYFEESL--AAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 413 AYT 415
Y
Sbjct: 444 VYV 446
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+Y L++ G + + +F++M++ G + ++ LH R K +A L
Sbjct: 231 LYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQML--LLHKRIDRKKIADVLLL 288
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
EK E KP+++TY I++ + + + + + + V D T Y
Sbjct: 289 MEK----ENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYS 344
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
G+ + E +L M+ + + F L+ Y + D++++++K + KP
Sbjct: 345 GAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI---CESKPYFE 401
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
+ + +GK +AE +F+++ +M S T+ L+ +Y +SK K+L +
Sbjct: 402 ESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRM 461
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRA 395
ES +I+ +T +A++ +Y ++ADSL +A
Sbjct: 462 AESGCRIEATTWDALIKLYVEAGEVEKADSLLDKA 496
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 14/243 (5%)
Query: 183 KMKGMER---CKPNI-------VTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
K++G+E+ C I V Y +L AG V++ +F + + +T
Sbjct: 208 KIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTC 267
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ ++ + KR +++ +L M+ KP L+T+ +LID G MEQ+ +++
Sbjct: 268 DQMLLLH-KRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKD 326
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSK 352
+ T +Y A LKDKAE V K+M + + L+ +Y +
Sbjct: 327 EGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDE 386
Query: 353 AKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
K ++ + ESK + S A + + N QEA+++F++ + +STY +L +
Sbjct: 387 VKRIWK-ICESKPYFEESL--AAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 413 AYT 415
Y
Sbjct: 444 VYV 446
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 131/276 (47%), Gaps = 24/276 (8%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER--CKPNIVTYNIILRA------ 203
P +YN+LIS+ + + + T+ A ++++ +PN TY + +A
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQT-HLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQ 127
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
+ + G+ + L K L+ V+ D + ++ Y G +RE ++ R++ +PD
Sbjct: 128 WHRHGRALHAHVL-KFLEP--VNHDRFVQAALVGFYANCGKLREARSLFERIR----EPD 180
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
L T+N L+ +Y ++ D E+V +R + +P+ + +++ + A L + V+
Sbjct: 181 LATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSC--ANLGEFVRGVWA 238
Query: 324 QMTEMGYAPSF--VTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCI 381
+ + + SLI +Y C C+S A+++FD + Q VS NAM+ +
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM----SQRDVSCYNAMIRGLAV 294
Query: 382 NNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ QE L++ S ++PD++T+ + A + +
Sbjct: 295 HGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 16/278 (5%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
LF EM D+ + ++++ ++ K +AL + M+ + +PNI T +I
Sbjct: 173 LFDEMT----EKDSYSWTAMVTGYV----KKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
+ A A + + + + + + D ++ +MD YGK G I E + ++
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----V 280
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
+ D++++ +ID Y K ++ + +F L+ S E+P+ TF ++ ++ +
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
V MT +G+ P SL+ MY C + AK + DG + + S +
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQ--- 397
Query: 381 INNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
N P EA F PD T+ + A T A
Sbjct: 398 -NGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 22/272 (8%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+ + I V+ + R A+ L + +P S Y +LI +T+AL +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVC----SQTRALEEGKKVH 108
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
E ++ P IV +N +LR +A+ G + +F ++ + D+ ++N +++ Y +
Sbjct: 109 EHIR-TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP----NRDLCSWNVMVNGYAE 163
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR-SKEKPSLP 300
G++ E + M + D ++ ++ Y KK Q ++ ++ + R +P++
Sbjct: 164 VGLLEEARKLFDEMT----EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 301 TFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL 360
T + V + + + + + G V SL+ MYG C C+ +A+ +FD +
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
VE V + +M+D Y ++ +E SLF
Sbjct: 280 VEK----DVVSWTSMIDRYFKSSRWREGFSLF 307
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ HL K + + YF + + + +TY +L + + E+ L +
Sbjct: 94 AIHLDLVAKAREITAGENYFVDLPETSKTE---LTYGSLLNCYCKELLTEKAEGLLNKMK 150
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
E ++P +YN +M Y K G ++ AM+ +K+ PD T+N+ + +
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210
Query: 282 KMEQVFKSLLR-SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESL 340
+E+V + + R + P T+++M Y A L KAE +++ F ++ L
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFL 270
Query: 341 IYMYGFCDCVSKAKELFDGLVESKVQI----KVSTLNAMLDVYCINNLPQEADSLFQRAR 396
I +YG +++ ++ L ++ I V+ LN + + +N+LP A++LF+ +
Sbjct: 271 ITLYGRLGKLTEVYRIWRSL---RLAIPKTSNVAYLNMIQVLVKLNDLPG-AETLFKEWQ 326
Query: 397 SIKVLPDASTYKLLYKAYTK 416
+ D +L AY +
Sbjct: 327 ANCSTYDIRIVNVLIGAYAQ 346
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 49/313 (15%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA-------HLHSR------ 168
++ +IS + A+ LFSEM+ G RP+ Y+ +++A +H++
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNY 424
Query: 169 DKTKALAKAL--GYFEKMKGMERCK-------PNIVTYNIILRAFAQAGKVEQVNSLFKD 219
+++ + AL Y + K E K +IV ++ +L +AQ G+ E +F +
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 220 LDESIVSPDIYTYNGVM------DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
L + + P+ +T++ ++ +A +G A+ +R+ S+ C + L+
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS-----SALLTM 539
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
Y KK + E+VFK R +EK L ++NSM+ Y + KA +VFK+M +
Sbjct: 540 YAKKGNIESAEEVFK---RQREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 334 FVTHESLIYMYGFCDCVSKAKELFDGLV-ESKVQIKVSTLNAMLDVY-----------CI 381
VT + V + ++ FD +V + K+ + M+D+Y I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 382 NNLPQEADSLFQR 394
N+P A S R
Sbjct: 656 ENMPNPAGSTIWR 668
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 124/276 (44%), Gaps = 17/276 (6%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
++ +I + + R L + G D ++ +L+ A+ K A+ AL F
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY----SKCTAMLDALRLF 353
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
+++ C N+V++ ++ F Q E+ LF ++ V P+ +TY+ ++ A
Sbjct: 354 KEIG----CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-- 407
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+I E +K+N + + LL D+Y K + ++ +VF + + +
Sbjct: 408 -PVISPSEVHAQVVKTNYERSSTVGTALL-DAYVKLGKVEEAAKVFSGI----DDKDIVA 461
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL- 360
+++M+ Y + + A +F ++T+ G P+ T S++ + + + F G
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 361 VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRAR 396
++S++ + +A+L +Y + A+ +F+R R
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 228 DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
D+ ++D Y K ++ + MK + +++T+ LI Y + D++ +F
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
+ +P+ TF + + + + + V + + G + SLI +Y C
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 348 DCVSKAKELFDGLVESKVQIK-VSTLNAMLDVYCINNLPQEADSLFQRAR 396
V KA+ LFD K ++K V T N+M+ Y N L EA +F R
Sbjct: 243 GNVRKARILFD-----KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 18/223 (8%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSV--YNSLISAHLHSRDKTKALAKAL 178
V + LI + GK G +A +F C DT+V +N++I++++H KA+A
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMF-------CEADTNVITWNAMIASYVHCEQSEKAIA--- 519
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
F++M E KP+ +T +L A G +E+ + + + E+ ++ ++D
Sbjct: 520 -LFDRMVS-ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y K G + + + NQ D + +N++I YG + +F + S KP+
Sbjct: 578 YAKCGHLEKSRELFD--AGNQ--KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
PTF +++ A L ++ + +F +M + P+ + L+
Sbjct: 634 GPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLV 676
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 18/330 (5%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
L ELGK +P + F + + D+ V + L+S+ K +A LF +
Sbjct: 337 LINELGKM-MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G + +N+++ + K K K + F K++ + + + + ++ + + G
Sbjct: 396 G---NKEAWNTMLKGY----GKMKCHVKCIELFRKIQNL-GIEIDSASATSVISSCSHIG 447
Query: 209 KVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFN 268
V SL + ++ + I N ++D YGK G + M +N +IT+N
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN-----VITWN 502
Query: 269 LLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
+I SY +Q +K +F ++ KPS T ++++ ++ + + + +TE
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEA 388
+ + +LI MY C + K++ELFD + Q N M+ Y ++ + A
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFD----AGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 389 DSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
+LF + V P T+ L A T A
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAG 648
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 18/317 (5%)
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
GK + C+E+FR +Q + D+ + +IS G L L + T
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEI-DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT 467
Query: 154 TSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
SV NSLI + D T A + N++T+N ++ ++ + E+
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAW----------RMFCEADTNVITWNAMIASYVHCEQSEKA 517
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDS 273
+LF + P T ++ A G + + + + + + +L LID
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS 333
Y K +K ++F + +K ++ +N M+ YG + A +F QM E P+
Sbjct: 578 YAKCGHLEKSRELFDA---GNQKDAV-CWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
Query: 334 FVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQ 393
T +L+ V + K+LF + + V+ + + ++D+ + +EA+S
Sbjct: 634 GPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAES--- 690
Query: 394 RARSIKVLPDASTYKLL 410
S+ PD + L
Sbjct: 691 TVMSMPFSPDGVIWGTL 707
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 144 EMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
E+ + G + D +N +IS + D A+A F++M+ + KP T+ +L A
Sbjct: 589 ELFDAGNQKDAVCWNVMISGYGMHGDVESAIA----LFDQMEESD-VKPTGPTFLALLSA 643
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
AG VEQ LF + + V P++ Y+ ++D + G + E E+ + M + PD
Sbjct: 644 CTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFS---PD 700
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLN-YGKARLKDKAENVF 322
+ + L+ S +F+ ++ + + S P + M+ N Y A ++AE
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVAS--DPQNDGYYIMLANMYSAAGKWEEAERAR 758
Query: 323 KQMTEMG 329
+ M E G
Sbjct: 759 EMMRESG 765
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 16/296 (5%)
Query: 116 MADNGVY------SKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD 169
M+ NG++ + L+ + K G A F +++ G RPD +Y ++I ++++
Sbjct: 410 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNA-G 468
Query: 170 KTKALAKALGYFEKMKGME--RCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSP 227
K K L + L MK M+ K + Y +LRA+AQ G + + + P
Sbjct: 469 KPK-LGERL-----MKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGP 522
Query: 228 -DIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQV 286
Y+ ++AYGK G + + ++ M+ KPD L+ +Y + DK ++
Sbjct: 523 LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRL 582
Query: 287 FKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGF 346
L + + + T+ +V L ++AE + +++++G AP F SL MY
Sbjct: 583 LLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSG 642
Query: 347 CDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLP 402
K + L + Q+ + + ++ ++A +++ + K LP
Sbjct: 643 VRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARRMYKYMEARKFLP 698
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L+V + ++ + A YSKLI + K+ + +M G PD +L+
Sbjct: 368 LKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALV- 426
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
H++S K+ +A FE +K +P+ Y ++ + AGK + L K++
Sbjct: 427 -HMYS--KSGNFERATEAFENLKSY-GLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQA 482
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP-DLITFNLLIDSYGKKQQFD 281
+ Y ++ AY + G + + M+ P ++L +++YGK Q D
Sbjct: 483 KELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVD 542
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
K + F + + KP ++V Y DKA + Q+ + G +T+ L+
Sbjct: 543 KAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLV 602
Query: 342 YMYGFCDCVSKAKELF 357
+ +A++L
Sbjct: 603 DWMANLGLIEEAEQLL 618
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 91/233 (39%), Gaps = 1/233 (0%)
Query: 188 ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIRE 247
E +PN V + ++ + + LDE + I Y+ ++ + K I +
Sbjct: 343 ELLEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIED 402
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
+E +L +M N PD++T L+ Y K F++ + F++L +P + +M+L
Sbjct: 403 VERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL-VESKVQ 366
Y A E + K+M S + +L+ Y + A + + S
Sbjct: 463 GYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGP 522
Query: 367 IKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+ + ++ Y +A S F R + PD L +AY NS
Sbjct: 523 LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENS 575
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 105 VFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAH 164
VF M K+ D V++ +I+ ++G + AM LF M R + + + ++IS
Sbjct: 139 VFDEMSKR-----DVPVWNAMITGYQRRGDMKAAMELFDSMP----RKNVTSWTTVISGF 189
Query: 165 LHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI 224
+ ++AL F M+ + KPN +T +L A A G++E L E+
Sbjct: 190 ----SQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENG 245
Query: 225 VSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKME 284
+IY N ++ Y K GMI + + + + + +L ++N +I S + D+
Sbjct: 246 FFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR---NLCSWNSMIGSLATHGKHDEAL 302
Query: 285 QVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG-YAPSFVTHESLIYM 343
+F +LR EKP TF ++L + K + +FK M E+ +P + +I +
Sbjct: 303 TLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDL 362
Query: 344 YGFCDCVSKAKELFD 358
G V K +E +D
Sbjct: 363 LGR---VGKLQEAYD 374
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 21/301 (6%)
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKAL 174
+ +D+ + LI+ K G A +F EM + D V+N++I+ + R KA
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMS----KRDVPVWNAMITGY-QRRGDMKA- 166
Query: 175 AKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD-ESIVSPDIYTYN 233
A+ F+ M + N+ ++ ++ F+Q G + +F ++ + V P+ T
Sbjct: 167 --AMELFDSMP-----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
V+ A G + + + N ++ N I+ Y K D +++F+ L
Sbjct: 220 SVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
+ +L ++NSM+ + D+A +F QM G P VT L+ V K
Sbjct: 280 R---NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 354 KELFDGLVE-SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYK 412
+ELF + E K+ K+ M+D+ QEA L +++ + PDA + L
Sbjct: 337 QELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLI---KTMPMKPDAVVWGTLLG 393
Query: 413 A 413
A
Sbjct: 394 A 394
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 164/405 (40%), Gaps = 71/405 (17%)
Query: 66 DKEPLERTLNKYVRLVRTEHCFLLFEEL---------------GKHDKWLPCLEVFRWMQ 110
D +N Y+RL + + LLF E+ GK +E F M+
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 111 KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR-D 169
K + ++S +G L + + +E G + V +SL+S ++S+ +
Sbjct: 320 KSS-VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS--MYSKCE 376
Query: 170 KTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
K +A AK FE ++ + N V +N ++R +A G+ +V LF D+ S + D
Sbjct: 377 KMEAAAKV---FEALE-----EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
+T+ ++ + + + + +L N L+D Y K + Q+F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE- 487
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPS---------------- 333
R ++ ++ T+N+++ +Y + + +A ++FK+M G
Sbjct: 488 --RMCDRDNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 334 -------------------FVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNA 374
T SLI MY C + A+++F L E V ++NA
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE----WSVVSMNA 600
Query: 375 MLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
++ Y NNL +EA LFQ + V P T+ + +A K S
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN V + + + +AG E+ +F+ + + PD + V++ Y + G +++ +
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
M S PD++ +N++I +GK+ + F ++ +S K + T S++ G
Sbjct: 284 FGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
D V + ++G A + SL+ MY C+ + A ++F+ L E
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF---- 395
Query: 372 LNAMLDVYCINNLPQEADSLFQRARS 397
NAM+ Y N + LF +S
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKS 421
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 35/305 (11%)
Query: 138 AMWLFSEMRNTGCRPDTSVYNSLISA-----------HLHSRDKTKALAKA--------L 178
A+ LF EM G P + +++ A H + + + L
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672
Query: 179 GYFEKMKGM-ERCK--------PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDI 229
G + +GM E C +IV + ++ +Q G E+ +K++ V PD
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 230 YTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKS 289
T+ V+ +RE A+ + + D +T N LID Y K QVF
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 290 LLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDC 349
+ R + ++ ++NS++ Y K + A +F M + P +T ++
Sbjct: 793 MRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 350 VSKAKELFDGLV-ESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYK 408
VS +++F+ ++ + ++ +V + M+D+ QEAD F A+++K PDA +
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD-FIEAQNLK--PDARLWS 906
Query: 409 LLYKA 413
L A
Sbjct: 907 SLLGA 911
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 24/287 (8%)
Query: 114 WYMADNGV-YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK 172
W + N V ++ L S K G A+ +F MR+ G RPD + ++I+ ++ +
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI----RLG 275
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
L A F +M P++V +N+++ + G F ++ +S V T
Sbjct: 276 KLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 233 NGVMDAYG-----KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVF 287
V+ A G G++ EA+ + SN + + L+ Y K ++ + +VF
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASN-----IYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 288 KSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC 347
++L E+ + +N+M+ Y K +F M GY T SL+
Sbjct: 386 EAL----EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 348 DCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQR 394
+ + +++ K+ + NA++D+Y ++A +F+R
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 134/339 (39%), Gaps = 31/339 (9%)
Query: 109 MQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISA---HL 165
M+K+ + + ++ L+ + A+ + EM G PD V+ L+ A H
Sbjct: 173 MRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 232
Query: 166 HSRDKTKALAKA-------LGYFEKM--------KGMER-----------CKPNIVTYNI 199
+D K L YF + K ME +P+IV Y
Sbjct: 233 SVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTN 292
Query: 200 ILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQ 259
+L +A AGK+ L +D+ P+ Y ++ A K + E + M+ +
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 260 CKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAE 319
C+ D++T+ L+ + K + DK V +++ PS T+ +++ + K ++
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
+ ++M ++ Y P + +I + V +A L++ + E+ + V T M++
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 380 CINNLPQEADSLFQR--ARSIKVLPDASTYKLLYKAYTK 416
EA F+ R + + T KLL K
Sbjct: 473 ASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 511
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 130/341 (38%), Gaps = 42/341 (12%)
Query: 106 FRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT----------------- 148
F W KQ Y VY ++ ++ K Q L EMR
Sbjct: 134 FVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRF 193
Query: 149 -------------------GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMER 189
G PD V+ L+ A K ++ A FE M+ R
Sbjct: 194 ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALC----KHGSVKDAAKLFEDMR--MR 247
Query: 190 CKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREME 249
N+ + +L + + GK+ + + ++E+ PDI Y ++ Y G + +
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 250 AMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNY 309
+L M+ +P+ + +LI + K + ++ +VF + R + + + T+ ++V +
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 310 GKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKV 369
K DK V M + G PS +T+ ++ + + + EL + + + + +
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 370 STLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLL 410
N ++ + C +EA L+ + P T+ ++
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 12/321 (3%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYF 181
+ +++ + + G A + M +G +V++ L+S S + KA+ F
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEP----QKAVDLF 270
Query: 182 EKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGK 241
KM + C PN+VTY +++ F G V++ ++ + ++PDI N ++ Y +
Sbjct: 271 NKMIQIG-CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 242 RGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
G E + T ++ + PD TF ++ S +FD + ++ + L T
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVT 386
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFC--DCVSKAKELFDG 359
N + + K A V M+ +A T+ +Y+ C A +++
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYT--VYLSALCRGGAPRAAIKMYKI 444
Query: 360 LVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANS 419
+++ K + +A++D A LF+R K D +Y + K +A
Sbjct: 445 IIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKR 504
Query: 420 XXXXXXXXXXXXXXGIIPNKR 440
GI PN+R
Sbjct: 505 IEEAYSLCCDMKEGGIYPNRR 525
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
V+S L+S + G+ + A+ LF++M GC P+ Y SLI + + +A
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV----DLGMVDEAFTV 304
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
K++ E P+IV N+++ + + G+ E+ +F L++ + PD YT+ ++ +
Sbjct: 305 LSKVQS-EGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
G + + + ++ DL+T NLL + + K
Sbjct: 364 LSGKFDLVPRITHGIGTDF---DLVTGNLLSNCFSK 396
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 146/328 (44%), Gaps = 21/328 (6%)
Query: 90 FEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTG 149
+ E+G + ++R M+ D Y LI + RL + S + +G
Sbjct: 95 YAEIGNS---ISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 150 CRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGK 209
V NSL+ + + D +A A F+KM + ++V +N ++ FA+ GK
Sbjct: 152 FGSLIYVQNSLLHLYANCGD----VASAYKVFDKMP-----EKDLVAWNSVINGFAENGK 202
Query: 210 VEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL 269
E+ +L+ +++ + PD +T ++ A K G + + + M +L + N+
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM-TEM 328
L+D Y + + ++ + +F ++ +K S+ ++ S+++ +A +FK M +
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMV---DKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 329 GYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQE 387
G P +T ++Y C V + E F + E K++ ++ M+D+ ++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 388 ADSLFQRARSIKVLPDASTYKLLYKAYT 415
A ++ +S+ + P+ ++ L A T
Sbjct: 379 A---YEYIKSMPMQPNVVIWRTLLGACT 403
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 138/362 (38%), Gaps = 69/362 (19%)
Query: 61 TRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNG 120
K+ DK P R + Y L++ E K +P +V W
Sbjct: 188 AHKVFDKSP-HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW------------ 234
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGY 180
+ +IS + G + A+ LF +M T RPD S +++SA
Sbjct: 235 --NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA----------------- 275
Query: 181 FEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYG 240
C AQ+G +E + +D+ ++ N ++D Y
Sbjct: 276 ---------C--------------AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 241 KRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLP 300
K G + + R+ D+I++N LI Y + + +F+ +LRS E P+
Sbjct: 313 KCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 301 TFNSMVLNYGKARLKDKAENVF----KQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
T S++ D + K++ + A S T SLI MY C + A ++
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT--SLIDMYAKCGDIEAAHQV 426
Query: 357 FDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
F+ ++ +S+ NAM+ + ++ + LF R R I + PD T+ L A +
Sbjct: 427 FNSILHK----SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 417 AN 418
+
Sbjct: 483 SG 484
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 101 PCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSL 160
C V + ++ W++ D + + ++ + K G A +F+ + NT D +N++
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTI 421
Query: 161 ISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL 220
IS + + ++A+ + M+ N T+ +L A +QAG + Q L L
Sbjct: 422 ISGYAQNGFASEAIEM----YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 221 DESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQF 280
++ + D++ + D YGK G + + ++ ++ + + + +N LI +G
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGFHGHG 533
Query: 281 DKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM-TEMGYAPSFVTHES 339
+K +FK +L KP TF +++ + L D+ + F+ M T+ G PS +
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 340 LIYMYG 345
++ MYG
Sbjct: 594 MVDMYG 599
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 178 LGYFEKMKGMERCKPN--IVTYNIILRAFAQAGKVEQVNSLFKDLDE-SIVSPDIYTYNG 234
LG + + + PN ++++N I+ +AQ G + ++ ++E ++ + T+
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 235 VMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSK 294
V+ A + G +R+ + R+ N D+ L D YGK + + +F + R
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 295 EKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAK 354
P +N+++ +G +KA +FK+M + G P +T +L+ V + +
Sbjct: 517 SVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 355 ELFDGL-VESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
F+ + + + + M+D+Y + ++ + +S+ + PDAS + L A
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMY---GRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 12/231 (5%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
+E++ M+++ A+ G + ++ + G R M L + G D V SL
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 163 AHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDE 222
+ K L AL F ++ + N V +N ++ G E+ LFK++ +
Sbjct: 495 MY----GKCGRLEDALSLFYQIP-----RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN-QCKPDLITFNLLIDSYGKKQQFD 281
V PD T+ ++ A G++ E + M+++ P L + ++D YG+ Q +
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARL-KDKAENVFKQMTE-MGY 330
+ KS+ + S +G L K +E++F+ E +GY
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 17/252 (6%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
C +F W +Q + +N Y I +G + + +++ + + ++YNS+I
Sbjct: 155 CFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSII 214
Query: 162 SAHLHSRDKTKALAKALGYFEKM---KGMERCKPNIVTYNIILRAFAQAGK--------V 210
K L +A+ F M K +E C+P I TY+I+ +A G +
Sbjct: 215 FYF----TKAGKLIRAVNIFRHMVTSKNLE-CRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK-SNQCKPDLITFNL 269
E V SLF+ + +S + PD++ N ++ Y + + + +M C+P+ T++
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 270 LIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG 329
LI + + ++ + P+ ++NS+V + + D A +M E G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 330 YAPSFVTHESLI 341
F+++ +L+
Sbjct: 390 RVVDFISYRTLV 401
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAH---LHSRDKTKALAKALGYFEKMKGMERCKPNIVTY 197
LF +M ++G PD N L+ + LH D AL F +M + C+PN TY
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVND-------ALRIFHQMSVVYDCEPNSFTY 327
Query: 198 NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKS 257
+ ++ G+ L ++ P+ +YN +++A+ G I + L M
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 258 NQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMV 306
N D I++ L+D +K ++D+ ++ + +LR K+ +++ +V
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLREKQLVDRDSYDKLV 435
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 3/275 (1%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
+ + LI + + G+ A L M D +Y+ L+S+ +D +
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS--CFDV 235
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
+GY E ++ R P + Y +++R + G+ ++V S+ + V PD+ Y V+
Sbjct: 236 IGYLEDLRKT-RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQ 294
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
+ + + + PD+ T+N+ I+ K+ + ++ S+ + +P
Sbjct: 295 GVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEP 354
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
++ T+N ++ KA +A+ ++K+M G + T + +I Y D V A L
Sbjct: 355 NVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLL 414
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLF 392
+ V +K S + ++ C L +A L
Sbjct: 415 EEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 56 LVRLLTRKISDKEPLERTLNKYVRL-VRTEHCF--LLFEELGKHDKWLPCLEVFRWMQKQ 112
L+ +L RK E + L K R+ VR E +L + L + + E+ R+M Q
Sbjct: 149 LLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMS-Q 207
Query: 113 RWYMADNGVYSKLISVMGKKGQTRL--AMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDK 170
+ D +YS+L+S + K + + ++R T P Y +++ L +
Sbjct: 208 DSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDY-TVVMRFLVEGGR 266
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
K + L +MK +R +P++V Y I+L+ + + LF +L ++PD+Y
Sbjct: 267 GKEVVSVLN---QMK-CDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVY 322
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
TYN ++ K+ I M++ M +P+++T+N+LI + K + + ++K +
Sbjct: 323 TYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEM 382
Query: 291 LRSKEKPSLPTFNSMVLNY 309
+ + TF+ M+ Y
Sbjct: 383 ETNGVNRNSHTFDIMISAY 401
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 129/317 (40%), Gaps = 56/317 (17%)
Query: 120 GVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALG 179
++ +I+ G G+ A+ +F ++ N C P N+L+ + R + + + L
Sbjct: 109 SIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEIL- 167
Query: 180 YFEKMKGMERCKPNI----VTYNIILRAFAQAGKVEQVNSLFKDL--DESIVSPDIYT-- 231
++ C+ + T+ I++ A + G+V+ L + + D IV P +Y+
Sbjct: 168 -------VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRL 220
Query: 232 ---------------------------------YNGVMDAYGKRGMIREMEAMLTRMKSN 258
Y VM + G +E+ ++L +MK +
Sbjct: 221 LSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCD 280
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
+ +PDL+ + +++ + + K +++F LL P + T+N + K + A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
+ M ++G P+ VT+ LI +S+AK L+ + + V T + M+
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Query: 379 Y-------CINNLPQEA 388
Y C + L +EA
Sbjct: 401 YIEVDEVVCAHGLLEEA 417
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 197 YNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMK 256
YNII+ +AGK ++ ++F +L S + PD+ TYN +M + G ++ A + R
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFSSLGRAEKLYAEMIR-- 73
Query: 257 SNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKA-RLK 315
PD IT+N +I K+ + + +V K S TFN+++ Y KA R+K
Sbjct: 74 -RGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATRVK 123
Query: 316 DKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAM 375
D N+F +M G + +T+ +LI+ + + A ++F +V + V T +
Sbjct: 124 D-GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 376 LDVYC 380
L C
Sbjct: 183 LPQLC 187
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
M M+ + D +N++I K +FD+ +F +LL S +P + T+N M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
+ +AE ++ +M G P +T+ S+I +G C K +L KV S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMI--HGLC----KQNKLAQA---RKVSKSCS 107
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAY 414
T N +++ YC ++ +LF ++ + TY L +
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 175/424 (41%), Gaps = 50/424 (11%)
Query: 33 SFGSIPTRPKRKKTNDDDSETRELVRLLTR-KISDKEPLERTLNKYVRLVRTEHCFLLFE 91
S G+ P R + D ++ ++ + S E ++R L+K + TE L
Sbjct: 58 SLGAPDKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDK-CGIDLTEELVLEVV 116
Query: 92 ELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCR 151
+ D W P + + + KQ +++ + +Y++++ V+GK + +F EM
Sbjct: 117 NRNRSD-WKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGF 175
Query: 152 PDTSVYNSLIS--AHLHSRDKTKALAKALGYFEKMKG--------------MERCKPNIV 195
+ Y L++ A H D+ A+G FE+ K M C+ V
Sbjct: 176 VNEKTYEVLLNRYAAAHKVDE------AVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHV 229
Query: 196 TY-------------------NIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
+ N+IL + G V + +KD+ S PD+ +Y ++
Sbjct: 230 EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI 289
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
+A K+G + + + M + PD+ N +ID+ K++ + +VF+ +
Sbjct: 290 NALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD 349
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMG--YAPSFVTHESLIYMYGFCDCVSKAK 354
P++ T+NS++ + K R +K + ++M G +P+ VT Y+ +
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT---FSYLLKYSQRSKDVD 406
Query: 355 ELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKL-LYKA 413
+ + + ++K ++ N M +Y + ++ ++ + PD TY + ++
Sbjct: 407 IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 414 YTKA 417
+TK
Sbjct: 467 HTKG 470
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 191 KPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA 250
K + V YN++L+ + ++G + +F + E ++ T+N ++ K+ + EM
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFN 323
Query: 251 MLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYG 310
+ +M+ T ++ + + +++ +L+SKEKP +P NS++ YG
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 311 KARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVS 370
K + + VF M A + ++ Y + + LF+ ++ES V
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLA----SWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 371 TLNAMLDVYCINNLPQEADSLFQRARS-IKVLPDASTYKLLYKAYTKAN 418
T A+L L + SLF+R ++ +V P Y L +A
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 151 RPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKV 210
+ D VYN L+ ++ S A F+ M ER N+VT+N ++ ++ +V
Sbjct: 268 KVDQVVYNVLLKLYMES----GLFDDARKVFDGMS--ER---NVVTWNSLISVLSKKVRV 318
Query: 211 EQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
++ +LF+ + E ++ T ++ A + + + + ++ ++ KPD+ N L
Sbjct: 319 HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSL 378
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+D YGK + + +VF +L L ++N M+ Y ++ N+F+ M E G
Sbjct: 379 MDMYGKCGEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADS 390
AP +T +L+ LF+ + K + +VS A+ C+ ++ A
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERM---KTEFRVSP--ALEHYACLVDILGRAGK 489
Query: 391 LFQRARSIKVLP 402
+ + + I+ +P
Sbjct: 490 IKEAVKVIETMP 501
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 18/263 (6%)
Query: 152 PDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVE 211
PD + +++SA K +ALG F M + P+ T+ +L A +++
Sbjct: 227 PDVICWTAVLSAF----SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
Q + L + + ++ + ++D YGK G +RE + M K + ++++ L+
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS----KKNSVSWSALL 338
Query: 272 DSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
Y + + +K ++F R E+ L F +++ + + Q G
Sbjct: 339 GGYCQNGEHEKAIEIF----REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIK-VSTLNAMLDVYCINNLPQEADS 390
+ + +LI +YG C+ A ++ SK+ I+ + T NAML N +EA S
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVY-----SKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 391 LFQRARSIKVLPDASTYKLLYKA 413
F + PD ++ + A
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTA 472
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 18/196 (9%)
Query: 94 GKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
G+H+K +E+FR M+++ Y + ++ RL + + GC +
Sbjct: 345 GEHEK---AIEIFREMEEKDLY-----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 154 TSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQV 213
V ++LI + K+ + A + KM N++T+N +L A AQ G+ E+
Sbjct: 397 VIVESALIDLY----GKSGCIDSASRVYSKMS-----IRNMITWNAMLSALAQNGRGEEA 447
Query: 214 NSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRM-KSNQCKPDLITFNLLID 272
S F D+ + + PD ++ ++ A G GM+ E M KS KP ++ +ID
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMID 507
Query: 273 SYGKKQQFDKMEQVFK 288
G+ F++ E + +
Sbjct: 508 LLGRAGLFEEAENLLE 523
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKE-KPSLPTFNSMVLNYGKARLKDKAE 319
+PD+I + ++ ++ K +++ +F ++ R K P TF +++ G R + +
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 320 NVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVY 379
+ ++ G + V SL+ MYG C V +A+++F+G+ + + +A+L Y
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGY 341
Query: 380 CINNLPQEADSLFQ 393
C N ++A +F+
Sbjct: 342 CQNGEHEKAIEIFR 355
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 141/303 (46%), Gaps = 32/303 (10%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D V + L+++ G R A +F + +G + D +NS+++A+ K + A
Sbjct: 96 DPFVRTSLLNMYSSCGDLRSAQRVFDD---SGSK-DLPAWNSVVNAYA----KAGLIDDA 147
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDL-----DESIVSPDIYTY 232
F++M ER N+++++ ++ + GK ++ LF+++ +E+ V P+ +T
Sbjct: 148 RKLFDEMP--ER---NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ V+ A G+ G + + + + + + D++ LID Y K ++ ++VF +L
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL-- 260
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM-GYAPSFVTHESLIYMYGFC---D 348
K + +++M+ L D+ +F +MT P+ VT + + G C
Sbjct: 261 -GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT---FVGILGACVHRG 316
Query: 349 CVSKAKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
+++ K F ++E + + M+D+Y + L +EA+S S+ + PD +
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA---SMPMEPDVLIW 373
Query: 408 KLL 410
L
Sbjct: 374 GSL 376
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 36/227 (15%)
Query: 98 KWLPCLEVFRWMQ----KQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPD 153
K+ L++FR MQ + + + S ++S G+ G W+ + + D
Sbjct: 174 KYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID 233
Query: 154 TSVYNSLIS--AHLHSRDKTKALAKALG--------------------------YFEKMK 185
+ +LI A S ++ K + ALG F +M
Sbjct: 234 IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT 293
Query: 186 GMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESI-VSPDIYTYNGVMDAYGKRGM 244
+ PN VT+ IL A G + + S FK + E ++P I Y ++D YG+ G+
Sbjct: 294 TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGL 353
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLL 291
I+E E+ + M +PD++ + L+ E K L+
Sbjct: 354 IKEAESFIASMPM---EPDVLIWGSLLSGSRMLGDIKTCEGALKRLI 397
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 36/302 (11%)
Query: 116 MADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP--DTSVYNSLISAHLHSR--DKT 171
+ D V + L++V G+ G +A + M P D +NSL+SA+L D+
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRM------PVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 172 KAL------------------AKALGYFEKMKGMERCKP--NIVTYNIILRAFAQAGKVE 211
+AL A G ++ K + P ++V++N ++ A+A G
Sbjct: 226 RALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN 285
Query: 212 QVNSLF-KDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLL 270
+V +F K LD+S PD +T V+ A G + + E + + + + + L
Sbjct: 286 EVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATAL 345
Query: 271 IDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGY 330
+D Y K + DK +VF R+ K + T+NS++ + L A +F +M G+
Sbjct: 346 VDMYSKCGKIDKALEVF----RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 331 APSFVTHESLIYMYGFCDCVSKAKELFDGLVES-KVQIKVSTLNAMLDVYCINNLPQEAD 389
P+ +T ++ + +A++LF+ + +V+ + M+D+ +EA+
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 390 SL 391
L
Sbjct: 462 EL 463
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
PN T+N ++RA+A + E ++F+++ V PD Y++ V+ A E +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK 311
+ D+ N L++ YG+ F ++ + +L ++NS++ Y +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYF----EIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 312 ARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVST 371
L D+A +F +M E + +I Y V +AKE+FD + V +
Sbjct: 219 KGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 372 LNAMLDVYCINNL 384
+ A V C N +
Sbjct: 275 VTAYAHVGCYNEV 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 89 LFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 148
++ + GK DK LEVFR K+ D ++ +IS + G + A+ +FSEM
Sbjct: 348 MYSKCGKIDK---ALEVFRATSKR-----DVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 149 GCRPDTSVYNSLISA--HLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQ 206
G +P+ + ++SA H+ D+ + L FE M + R +P I Y ++ +
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKL------FEMMSSVYRVEPTIEHYGCMVDLLGR 453
Query: 207 AGKVEQVNSLFKDL 220
GK+E+ L ++
Sbjct: 454 MGKIEEAEELVNEI 467
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 145/342 (42%), Gaps = 49/342 (14%)
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTK 172
R + D ++ +IS ++G A+++ MR + D +L+SA +R +
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA--ARTENL 391
Query: 173 ALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY 232
L K + + E +IV + ++ +A+ G + +F +S V D+ +
Sbjct: 392 KLGKEVQCYCIRHSFE---SDIVLASTVMDMYAKCGSIVDAKKVF----DSTVEKDLILW 444
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
N ++ AY + G+ E + M+ P++IT+NL+I S + Q D+ + +F +
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAP-------------------- 332
S P+L ++ +M+ + ++A ++M E G P
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 333 ---------------SFVTHE-SLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAML 376
S V+ E SL+ MY C ++KA+++F SK+ ++ NAM+
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG----SKLYSELPLSNAMI 620
Query: 377 DVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKAN 418
Y + +EA +L++ + + PD T + A A
Sbjct: 621 SAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 153 DTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQ 212
D ++N+L++A+ S +AL F M+ +E PN++T+N+I+ + + G+V++
Sbjct: 440 DLILWNTLLAAYAESGLS----GEALRLFYGMQ-LEGVPPNVITWNLIILSLLRNGQVDE 494
Query: 213 VNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNL--- 269
+F + S + P++ ++ +M+ + G E L +M+ + +P+ + +
Sbjct: 495 AKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS 554
Query: 270 ---------------------------------LIDSYGKKQQFDKMEQVFKSLLRSKEK 296
L+D Y K +K E+VF S L S+
Sbjct: 555 ACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE-- 612
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKEL 356
LP N+M+ Y +A +++ + +G P +T +++ +++A E+
Sbjct: 613 --LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 357 FDGLVESK 364
F +V +
Sbjct: 671 FTDIVSKR 678
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 120/311 (38%), Gaps = 54/311 (17%)
Query: 131 KKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLH---SRDKTKALAKALGYFEKMKGM 187
+ G+ A+ LFS+MR G P ++ +SA + + ++ A A+ + GM
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI-----VNGM 305
Query: 188 ERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIRE 247
E NI+ + +L + + G +E +F + E D+ T+N ++ Y ++G++ +
Sbjct: 306 EL--DNILGTS-LLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVED 358
Query: 248 MEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVL 307
M M+ + K D +T L+ + + + ++V +R
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS------------- 405
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
+ V +++ MY C + AK++FD VE + +
Sbjct: 406 ----------------------FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 368 KVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKANSXXXXXXXX 427
N +L Y + L EA LF + V P+ T+ L+ + +
Sbjct: 444 ----WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 428 XXXXXXGIIPN 438
GIIPN
Sbjct: 500 LQMQSSGIIPN 510
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
DN + + L++ K G A +F M D +N +IS ++ + L +
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMF----EKDVVTWNLIISGYVQ-----QGLVED 358
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQA-----GKVEQVNSLFKDLDESIVSPDIYTY 232
Y ++ +E+ K + VT ++ A A+ GK Q + + DI
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE-----SDIVLA 413
Query: 233 NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR 292
+ VMD Y K G I + + ++ + + DLI +N L+ +Y + + ++F +
Sbjct: 414 STVMDMYAKCGSIVDAK----KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 293 SKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLI 341
P++ T+N ++L+ + D+A+++F QM G P+ ++ +++
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 122 YSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKALG 179
YS LI G+ AM F +M G +N+L++A LHS+ DK L
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQL----- 159
Query: 180 YFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAY 239
+ E + + P+ ++Y I+++++ +G E+ + + + + + ++ +
Sbjct: 160 FDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSL 219
Query: 240 GKRGM------------------------IREMEA----------MLTRMKSNQCKPDLI 265
K+G +R M A ++ M S KPD I
Sbjct: 220 YKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTI 279
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
++N L+ +Y ++ D+ ++V++ L + P+ TF +++ + +RL ++ +FK+
Sbjct: 280 SYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKS 339
Query: 326 TEMGYAPSFVTHESLI 341
M P F T + L+
Sbjct: 340 VYMHKIPDFNTLKHLV 355
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 43/234 (18%)
Query: 102 CLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLI 161
+E+ R MQ + + ++ ++S + KKG+ +A L++EM GC D + YN I
Sbjct: 193 AIEIMRQMQGKGMEVT-TIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 162 SAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLD 221
+ AQ E+V L +++
Sbjct: 252 MS-----------------------------------------AQKESPERVKELIEEMS 270
Query: 222 ESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFD 281
+ PD +YN +M AY +RGM+ E + + ++ N C P+ TF LI + ++
Sbjct: 271 SMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Query: 282 KMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFV 335
+ +FK + + P T +V+ + + +D A+ + + + + + PSF+
Sbjct: 331 QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK-KFPPSFL 383
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DKTKALAKALGYFE 182
+I V+ K+G+ + + L + C P V SL+ L +++ +L K L
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL---- 295
Query: 183 KMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR 242
MK M + + Y+I++ A A+ G + +F ++ + S + + Y + ++
Sbjct: 296 LMKNM---VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEK 352
Query: 243 GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTF 302
G ++E E +L+ M+ + P TFN LI + + +K + + ++ PS F
Sbjct: 353 GDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAF 412
Query: 303 NSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVE 362
N MV + K ++A + + + G+ P T+ LI + + + +A +LF +
Sbjct: 413 NEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEY 472
Query: 363 SKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTK 416
K+ +++ C + + + + + P+A Y L KA+ K
Sbjct: 473 RKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 112 QRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKT 171
QR + A++ VY+ + V +KG + A L SEM +G P +N LI
Sbjct: 332 QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR----- 386
Query: 172 KALAKALGYFEKMKGMERCK--------PNIVTYNIILRAFAQAGKVEQVNSLF-KDLDE 222
G+ E KG+E C+ P+ +N ++++ ++ V + N + K +D+
Sbjct: 387 ------FGWEE--KGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDK 438
Query: 223 SIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDK 282
V PD +TY+ ++ + + I + + M+ + P F LI + +
Sbjct: 439 GFV-PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 283 MEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEM 328
E+ K + + +P+ +++++ + K K A+ V+ +M +
Sbjct: 498 GEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 132/290 (45%), Gaps = 21/290 (7%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
L++ G+ +A+ +F M+ D + S++ ++ + L A YF++M
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGN----LKLARTYFDQM 328
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGM 244
+R +++ I++ + +AG + +F+++ + + PD +T V+ A G
Sbjct: 329 PVRDR-----ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 245 IREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNS 304
+ E + T + N+ K D++ N LID Y K +K ++VF + ++ T+ +
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM----DQRDKFTWTA 439
Query: 305 MVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGL-VES 363
MV+ +A VF QM +M P +T+ ++ V +A++ F + +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 364 KVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
+++ + M+D+ L +EA ++ R + + P++ + L A
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEA---YEILRKMPMNPNSIVWGALLGA 546
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 21/269 (7%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCK--PNIVTYN 198
L EM P + ++SA S+ K K L K + + + CK P++ N
Sbjct: 223 LLVEMERNLVSPTSVTLLLVLSAC--SKVKDKDLCKRVHEY-----VSECKTEPSLRLEN 275
Query: 199 IILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSN 258
++ A+A G+++ +F+ S+ + D+ ++ ++ Y +RG ++ +M
Sbjct: 276 ALVNAYAACGEMDIAVRIFR----SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 259 QCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKA 318
D I++ ++ID Y + F++ ++F+ + + P T S++ +
Sbjct: 332 ----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 319 ENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDV 378
E + + + V +LI MY C C KA+++F + Q T AM+
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD----QRDKFTWTAMVVG 443
Query: 379 YCINNLPQEADSLFQRARSIKVLPDASTY 407
N QEA +F + + + + PD TY
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 16/266 (6%)
Query: 141 LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNII 200
L+ M G PD+ + L++ L A K L G+ N+ N +
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNG-LKRDGGALACGKKLHCHVVKFGL---GSNLYVQNAL 176
Query: 201 LRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQC 260
++ ++ G ++ +F + D++++N ++ Y + E +L M+ N
Sbjct: 177 VKMYSLCGLMDMARGVF----DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLV 232
Query: 261 KPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAEN 320
P +T L++ + K + D ++V + + K +PSL N++V Y D A
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 321 VFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYC 380
+F+ M A ++ S++ Y + A+ FD + V+ ++S M+D Y
Sbjct: 293 IFRSMK----ARDVISWTSIVKGYVERGNLKLARTYFD---QMPVRDRIS-WTIMIDGYL 344
Query: 381 INNLPQEADSLFQRARSIKVLPDAST 406
E+ +F+ +S ++PD T
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFT 370
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 112/236 (47%), Gaps = 15/236 (6%)
Query: 125 LISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM 184
LI V GK+G+ + A LF ++RN G +NSLI++ + + +AL+ E+M
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIES----WNSLITSFVDAGKLDEALS-LFSELEEM 389
Query: 185 KGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKR-- 242
+ K N+VT+ +++ G+ + F+ + S V + T ++ +
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPA 449
Query: 243 -GMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPT 301
+ RE+ + R ++ +++ N L++ Y K + VF+++ R K+ L +
Sbjct: 450 LNLGREIHGHVIRTSMSE---NILVQNALVNMYAKCGLLSEGSLVFEAI-RDKD---LIS 502
Query: 302 FNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+NS++ YG +KA ++F +M G+ P + +++ V K +E+F
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 135/318 (42%), Gaps = 24/318 (7%)
Query: 96 HDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTS 155
H + LE++R M +QR D + ++ G+ L +++ G + +
Sbjct: 136 HGLYENALELYRGM-RQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLH 194
Query: 156 VYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNS 215
V N L++ + K + A F +M R +++N++++ F+Q E
Sbjct: 195 VVNELLTLY----PKAGRMGDAYNLFVEMPVRNR-----MSWNVMIKGFSQEYDCESAVK 245
Query: 216 LFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEA--MLTRMKSNQCKPDLITFNLLIDS 273
+F+ + PD T+ V+ + + G ++ L RM N + + +
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA--VFFSV 303
Query: 274 YGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGK-ARLKDKAENVFKQMTEMGYAP 332
+ + E+V +++ + LP+ N+++ YGK ++KD AE++F+Q+ G
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKD-AEHLFRQIRNKGIE- 361
Query: 333 SFVTHESLIYMYGFCDCVSKAKELFDGLVE----SKVQIKVSTLNAMLDVYCINNLPQEA 388
+ SLI + + +A LF L E V+ V T +++ + ++
Sbjct: 362 ---SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 389 DSLFQRARSIKVLPDAST 406
F++ + KVL ++ T
Sbjct: 419 LEYFRQMQFSKVLANSVT 436
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 135/304 (44%), Gaps = 17/304 (5%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAK 176
AD V LI + K G+ LA +FS+ + + +N +IS+++ K
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQ----KDVAESWNVMISSYI----SVGNWFK 393
Query: 177 ALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVM 236
A+ +++M + KP++VT+ +L A +Q +E+ + + ES + D + ++
Sbjct: 394 AVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 237 DAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEK 296
D Y K G E EA R+ ++ K D++++ ++I +YG Q + F + + K
Sbjct: 453 DMYSKCG--NEKEAF--RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 297 PSLPTFNSMVLNYGKARLKDKAENVFKQM-TEMGYAPSFVTHESLIYMYGFCDCVSKAKE 355
P T +++ G A L D+ F QM ++ G P + +I + G + +A E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 356 LFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYT 415
+ E+ ++ L+ + C+ +L R DASTY +L+ Y
Sbjct: 569 IIQQTPETSDNAEL--LSTLFSACCL-HLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625
Query: 416 KANS 419
S
Sbjct: 626 SGES 629
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 17/301 (5%)
Query: 118 DNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALAKA 177
D V S L+ + GK +A +F +M R +NS+I ++ D +K+ +
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMP----RKSLVAWNSMIKGYVAKGD-SKSCVEI 296
Query: 178 LGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMD 237
L +E +P+ T IL A +++ + + + S+V+ DIY ++D
Sbjct: 297 LNRMI----IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLID 352
Query: 238 AYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKP 297
Y K G E + ++ + + + ++N++I SY + K +V+ ++ KP
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAE----SWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 298 SLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELF 357
+ TF S++ + +K + + ++E + +L+ MY C +A +F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 358 DGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKAYTKA 417
+ + + V + M+ Y + P+EA F + + PD T + A A
Sbjct: 469 NSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA 524
Query: 418 N 418
Sbjct: 525 G 525
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 100/247 (40%), Gaps = 52/247 (21%)
Query: 149 GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAG 208
G R D + SLI+ + +D A FE + ++ +N ++ +++
Sbjct: 34 GLRRDVVLCKSLINVYFTCKDH----CSARHVFENFD----IRSDVYIWNSLMSGYSKNS 85
Query: 209 KVEQVNSLFKDL-DESIVSPDIYTYNGVMDAYGKRG--MIREMEAMLTRMKSNQCKPDLI 265
+FK L + SI PD +T+ V+ AYG G + M L C D++
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC--DVV 143
Query: 266 TFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
+ L+ Y K F+ QVF + + + ++N+++ + ++ +KA +F +M
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEM----PERDVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 326 TEMGYAPSFVT-----------------------------------HESLIYMYGFCDCV 350
G+ P+ V+ + +L+ MYG CDC+
Sbjct: 200 ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL 259
Query: 351 SKAKELF 357
A+E+F
Sbjct: 260 EVAREVF 266
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 15/250 (6%)
Query: 90 FEELGK----HDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEM 145
+EEL K H K+ ++ + M+ ++ + +I GK G A+ LF+ +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETL-CFIIEQYGKNGHVDQAVELFNGV 172
Query: 146 RNT-GCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKM--KGMERCKPNIVTYNIILR 202
T GC+ VYNSL LH+ K A +M KG+ KP+ TY I++
Sbjct: 173 PKTLGCQQTVDVYNSL----LHALCDVKMFHGAYALIRRMIRKGL---KPDKRTYAILVN 225
Query: 203 AFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKP 262
+ AGK+++ ++ +P + +++ G + + M+++M P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 263 DLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVF 322
D+ TFN+LI++ K + + +++ + + + T+ +++ K D+A +
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 323 KQMTEMGYAP 332
E G+ P
Sbjct: 346 NNCVEDGHKP 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/389 (16%), Positives = 139/389 (35%), Gaps = 12/389 (3%)
Query: 55 ELVRLLTRKISDKEPLERTLNKYVRLVRTEHCFLLFEELGKHDKWLPCLEVFRWMQKQRW 114
+V ++ R+I ER+LN V +E F + + L F W +
Sbjct: 53 HVVNIVRREIHP----ERSLNSLRLPVTSEFVFRVLRATSRSSN--DSLRFFNWARSNPS 106
Query: 115 YMADNGVYSKLISVMGKKGQTRLAMW-LFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKA 173
Y + Y +L + + +MW + +M++ + + + K
Sbjct: 107 YTPTSMEYEELAKSLASHKKYE-SMWKILKQMKDL----SLDISGETLCFIIEQYGKNGH 161
Query: 174 LAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYN 233
+ +A+ F + C+ + YN +L A +L + + + PD TY
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 234 GVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRS 293
+++ + G ++E + L M P +LLI+ + +++ + +
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 294 KEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKA 353
P + TFN ++ K+ + ++ ++G T+++LI + +A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 354 KELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTYKLLYKA 413
L + VE + S ++ C N + +A S F + P+ Y +L
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 414 YTKANSXXXXXXXXXXXXXXGIIPNKRFF 442
+ G++P R F
Sbjct: 402 CGRGGKFVDAANYLVEMTEMGLVPISRCF 430
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAM 251
P YN I+ A+A +F + I P+++++N ++ AY K G+I EME+
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVF----DRIPQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 252 LTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLR----SKEKPSLPTFNSMVL 307
++ D +T+N+LI+ Y + + +++R + + +L T +
Sbjct: 95 FEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 308 NYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQI 367
+ G L + + Q+ ++G+ + L+YMY C+S AK++F GL + +
Sbjct: 151 SNGHVSL---GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 368 KVSTLNAMLDVYCINNLPQ 386
S + +L I + Q
Sbjct: 208 YNSLMGGLLACGMIEDALQ 226
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 126/325 (38%), Gaps = 82/325 (25%)
Query: 103 LEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLIS 162
L++FR M+K D+ ++ +I + + G + A+ F EM+ G + D + S++
Sbjct: 225 LQLFRGMEK------DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 163 A------------------------HLHSRD-------KTKALAKALGYFEKMKGMERCK 191
A H++ K K L A F++MK +
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-----Q 333
Query: 192 PNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTY------------------- 232
N+V++ ++ + Q G+ E+ +F D+ S + PD YT
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 233 ----------------NGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGK 276
N ++ YGK G I + + M D +++ ++ +Y +
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQ 449
Query: 277 KQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMT-EMGYAPSFV 335
+ + Q+F +++ KP T ++ +A L +K + FK MT E G PS
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 336 THESLIYMYGFCDCVSKAKELFDGL 360
+ +I ++ + +A +G+
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGM 534
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 29/289 (10%)
Query: 121 VYSKLISVMGKKGQTRLAMWLFSEMRNTGCRP--DTSVYNSLISAHLHSRDKTKALAKAL 178
+Y+K+I+ + + A+ LF EM P D +NS+IS + D + A+
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMISGCVECGD----MNTAV 117
Query: 179 GYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDA 238
F++M ER ++V++ ++ ++GKV+Q LF + D +N ++
Sbjct: 118 KLFDEMP--ER---SVVSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHG 168
Query: 239 YGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPS 298
Y + G + + + +M ++I++ +I + ++ + +FK++LR K +
Sbjct: 169 YLQFGKVDDALKLFKQMPGK----NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKST 224
Query: 299 LPTFNSMVLNYGKARLKDKAENVFKQMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFD 358
F ++ A V + ++G+ SLI Y C + ++++FD
Sbjct: 225 SRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
Query: 359 GLVESKVQIKVSTLNAMLDVYCINNLPQEADSLFQRARSIKVLPDASTY 407
KV +V+ A+L Y +N ++A S+F +LP+ ST+
Sbjct: 285 ----EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 85 HCFLLFEELGKHDKWLPCLEVFRWMQKQRWYMADNGVYSKLISVMGKKGQTRLAMWLFSE 144
H +L+ + D L VFR ++K + + L + + K + A ++ E
Sbjct: 121 HAIVLYAQANMLDH---SLRVFRDLEKFEISRTVKSLNALLFACLVAK-DYKEAKRVYIE 176
Query: 145 M-RNTGCRPDTSVYNSLISAHLHSRDKTKALAKALGYFEKMKGMERCKPNIVTYNIILRA 203
M + G PD YN +I S + + E+ KG+ KPN ++ +++
Sbjct: 177 MPKMYGIEPDLETYNRMIKVFCESG-SASSSYSIVAEMER-KGI---KPNSSSFGLMISG 231
Query: 204 FAQAGKVEQVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPD 263
F K ++V + + + V+ + TYN + + KR +E +A+L M S KP+
Sbjct: 232 FYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN 291
Query: 264 LITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFK 323
+T++ LI + + F++ +++FK ++ KP + +++ K + A ++ K
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCK 351
Query: 324 QMTEMGYAPSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLN 373
+ E + PSF +SL+ V +AKEL G V+ K V N
Sbjct: 352 ESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI-GQVKEKFTRNVELWN 400
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 131/322 (40%), Gaps = 41/322 (12%)
Query: 117 ADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKTKALA- 175
+D V S LIS+ GK G A +F EM + + +N++I ++ + D A
Sbjct: 79 SDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNGDAVLASGL 134
Query: 176 --------KALGYFEKMKG------MERCKP----------NIVTYNIILRAFAQAGKVE 211
+ + E +KG +E+ + N+ ++++L + K+E
Sbjct: 135 FEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 194
Query: 212 QVNSLFKDLDESIVSPDIYTYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLI 271
F+D+ E + + ++ +M Y + G + E A+ R+ + DL+ +N LI
Sbjct: 195 DARKFFEDIPE----KNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLI 246
Query: 272 DSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQMTEMGYA 331
Y + D F ++ +P T +S++ ++ D V + G
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 332 PSFVTHESLIYMYGFCDCVSKAKELFDGLVESKVQIKVSTLNAMLDVYCINNLPQEADSL 391
+ +LI MY C + A +F ES V+ N+M+ I+ +EA +
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVF----ESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 392 FQRARSIKVLPDASTYKLLYKA 413
F S+ + PD T+ + A
Sbjct: 363 FSTMESLDLKPDEITFIAVLTA 384
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 113 RWYMADNGVYSKLISVMGKKGQTRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSR--DK 170
R + D +++ LI+ + G + A+ F M+ G PD +S++SA S D
Sbjct: 233 RVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDV 292
Query: 171 TKALAKALGYFEKMKGMERCKPNIVTYNIILRAFAQAGKVEQVNSLFKDLDESIVSPDIY 230
+ + + + +G+E N N ++ +A+ G +E S+F ESI +
Sbjct: 293 GREVHSLINH----RGIEL---NQFVSNALIDMYAKCGDLENATSVF----ESISVRSVA 341
Query: 231 TYNGVMDAYGKRGMIREMEAMLTRMKSNQCKPDLITFNLLIDSYGKKQQFDKMEQVFKSL 290
N ++ G +E M + M+S KPD ITF ++ + + ++F +
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 291 LRSKEKPSLPTFNSMVLNYGKARLKDKAENVFKQM 325
KP++ F ++ G++ +A + K+M
Sbjct: 402 KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436