Miyakogusa Predicted Gene
- Lj4g3v2789200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2789200.1 Non Chatacterized Hit- tr|C6TJE7|C6TJE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54065
PE,76.72,0,coiled-coil,NULL; DUF241,Protein of unknown function
DUF241, plant; seg,NULL,CUFF.51649.1
(300 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35680.1 | Symbols: | Arabidopsis protein of unknown functio... 110 1e-24
AT4G35660.1 | Symbols: | Arabidopsis protein of unknown functio... 101 6e-22
AT4G35690.1 | Symbols: | Arabidopsis protein of unknown functio... 97 1e-20
AT2G17680.1 | Symbols: | Arabidopsis protein of unknown functio... 80 2e-15
AT4G35710.1 | Symbols: | Arabidopsis protein of unknown functio... 76 3e-14
AT3G51410.1 | Symbols: | Arabidopsis protein of unknown functio... 75 5e-14
AT4G35720.1 | Symbols: | Arabidopsis protein of unknown functio... 75 7e-14
AT1G76210.1 | Symbols: | Arabidopsis protein of unknown functio... 72 4e-13
AT2G17080.1 | Symbols: | Arabidopsis protein of unknown functio... 63 2e-10
AT2G17070.1 | Symbols: | Arabidopsis protein of unknown functio... 58 9e-09
AT4G35210.1 | Symbols: | Arabidopsis protein of unknown functio... 54 1e-07
AT1G20520.1 | Symbols: | Arabidopsis protein of unknown functio... 54 2e-07
>AT4G35680.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16917938-16919749 FORWARD LENGTH=503
Length = 503
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Query: 9 CTPQPVRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTIC--LEADTIQSDLVVLAEL 66
T QPVRS SLP+R+HP S ++ L+ L S ++ +T+ LV L EL
Sbjct: 13 TTHQPVRSASLPSRIHPLSVKLRTALSRLSIWRRSSSSISVSASFGYETVLVGLVNLTEL 72
Query: 67 YNCMEELFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSA 126
Y C+ EL +SP + LLH+Q GKL++E+L GSV LLD R++ +A++EHV L+SA
Sbjct: 73 YGCVHELLESPYVKHTLLHHQEGKLLDESLDGSVLLLDVYEGTREVIVAMREHVTNLKSA 132
Query: 127 XXXXXXXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRMENK 166
Y + R+KAKKEI+K + A+K+ME +
Sbjct: 133 LRRKGSLEKEAKA--YFNLRKKAKKEISKQINALKKMETR 170
>AT4G35660.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16912792-16913658 FORWARD LENGTH=288
Length = 288
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 38/308 (12%)
Query: 3 TTSTLPCTPQPVRSISLPTR-VHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSDLV 61
++S++ T P RSISLPTR +HP +QRVE L ++ +S +S+ IQ L
Sbjct: 5 SSSSVATTHVPARSISLPTRLIHPKAQRVEEELKKIQALNSSSSASS------RIQLGLA 58
Query: 62 VLAELYNCM-EELFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHV 120
L ELY+ + E++ SPQ QQAL +N KLVE+AL S+ LLD RD+ L EH+
Sbjct: 59 KLVELYDFVNEQVISSPQGQQALRLCRNRKLVEDALDESIVLLDVSDFTRDLIGTLMEHI 118
Query: 121 QTLQSAXXXXX--XXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRMENKVSYFSLT---GQ 175
Q LQSA Y SF +K+K E A+ + ++ R + K + + G
Sbjct: 119 QELQSALRRRRGNLSSVQSEIRSYISFHKKSKTEAARQVKSLARRQTKKKAWVIKQSGGL 178
Query: 176 EQNITFLARVLREAXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNT 235
+++ + ++ +LR++ G ++KN
Sbjct: 179 DEHSSMVSNILRQSNASTISILQSLLQFLSTSG-------------------ENNEKKNG 219
Query: 236 NV--VELNALCSLLAR---RKQGDAIAEVQGALRVLETLNVSIDGLEGGLDCIFRRLVQN 290
+ V+ + + S R RK I + Q L L +NVS++ ++ L + RRL+Q+
Sbjct: 220 EIGCVDNSMIRSFFGRIIGRKMVKEI-DAQTILGRLAMVNVSLEAIKDELSYLSRRLIQH 278
Query: 291 RVSFLNML 298
R S LN++
Sbjct: 279 RASLLNIV 286
>AT4G35690.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16921886-16922740 FORWARD LENGTH=284
Length = 284
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 14 VRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSDLVVLAELYNCMEEL 73
+RSISLP+ HPS+ +E LN +KT ++ SS +++ L L ELYNC E+
Sbjct: 10 LRSISLPSSSHPSTTGIEESLNKVKTINTMTGSS------ESVLMGLEGLEELYNCTEDF 63
Query: 74 FQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXXXXX 133
+ TQ+ + + +EE L GS+ L+D CS +RD+ + +EHV+ +QS
Sbjct: 64 LKMGSTQRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVV 123
Query: 134 XXX----XXXXQYDSFRRKAKKEIAKNLGAMKRMENKVSYFSLTG---QEQNITFLARVL 186
Y FR+ +KE + LG++K ++ +S S QE+++ + +
Sbjct: 124 GGEDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDAM 183
Query: 187 REAXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNTNV--VELNALC 244
R+ + G R ++ + ++L C
Sbjct: 184 RQV--VSVSVAVLRSFLEFLSGRRQSNIKSKLASVLKKKKVHHVEETKNELENLDLEIFC 241
Query: 245 SLLARRKQGDAIAEVQGALRVLETLNVSIDGLEGGLDCIFRRLVQNRVSFLNMLAQ 300
S +K+ LE + +SIDG E L+ +FRRL++ R S LN+++
Sbjct: 242 SRNDLQKK-------------LEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284
>AT2G17680.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7679241-7680119 FORWARD LENGTH=292
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 11 PQPVRSISLPTRVHPSSQRVEALLN-HLKTHHSKPVSSTICLEADTIQSDLVVLAELYNC 69
VRSISL +R HPS+ +E L+ L T ++ ++S+ +++ S L L +LY+C
Sbjct: 7 KNHVRSISLQSRSHPSTAAIEESLDKFLITMNTSTMASS-----ESVHSGLSGLEDLYDC 61
Query: 70 MEELFQSPQTQQAL---------LHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHV 120
E+L + TQ+ L G+ +EE L GS+ L+D C+ +RD+ + EHV
Sbjct: 62 SEDLLKMGSTQRVLSFSDEKKKKKRKVKGEFMEEMLDGSLRLMDICNVSRDLMVETHEHV 121
Query: 121 QTLQSAXXXXXXXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRME-NKVSYFSLTGQEQNI 179
LQS Y FR+ +KE+ K LG++K + V Q+ +I
Sbjct: 122 LGLQSC----VRRRKDVDVSGYVGFRKNMRKEVKKLLGSLKNINVGLVMRDHGYDQDGDI 177
Query: 180 TFLARVLREAXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNT-NVV 238
FLA + + G + K N +
Sbjct: 178 HFLAVIHAMRRVVYMTVSVLKSFFEFLSGRQNGNDVRSKLALVLMNKKFHDHDKMVKNEL 237
Query: 239 E--LNALCSLLARRKQGDAIAEVQGALRVLETLNVSIDGLEGGLDCIFRRLVQNRVSFLN 296
E +A+C GD+I+ LE + V I E L+ +FR L++ R S LN
Sbjct: 238 ENVDSAIC--------GDSISH-DDLHEKLEEVEVWIGKFEKSLEGLFRGLIKTRASLLN 288
Query: 297 MLAQ 300
+++Q
Sbjct: 289 IISQ 292
>AT4G35710.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16925301-16926152 FORWARD LENGTH=283
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 11 PQPVRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSDLVVLAELYNCM 70
+ +RSISLP+R PS+ +E LN +KT ++ SS ++I L L ELY +
Sbjct: 7 KKQLRSISLPSRSQPSTSGLEESLNKIKTINTTTGSS------ESILMGLAGLEELYIFL 60
Query: 71 EELFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQS----- 125
EE F ++Q ++ + +EE L GS+ L+D CS +RD+ + EHV+ +QS
Sbjct: 61 EE-FLKMGSKQRVMSSGGSEFMEEMLDGSLRLMDICSVSRDLMVETHEHVRGVQSYVRRK 119
Query: 126 -AXXXXXXXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRMEN 165
Y FR+ +KE K LG++K+++
Sbjct: 120 KVSGGGGGDKIDVAVSDYVGFRKNMRKEAKKLLGSLKKVDG 160
>AT3G51410.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr3:19081357-19082205 REVERSE LENGTH=282
Length = 282
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 13 PVRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSDLVVLAELYNCMEE 72
PVRSISLP+R+H S + +A L+ + + ++ ++ + L+ L+ELY+ + +
Sbjct: 38 PVRSISLPSRIHHPSAKFQAALSQIHLFQNSS-------DSQSLHASLLNLSELYHSLHQ 90
Query: 73 LFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXXXX 132
L S T QA E +L S TLLD+C AAR++ L L+EH+ LQSA
Sbjct: 91 LNHSLPTAQA----------EHSLDVSATLLDSCDAARNLVLTLREHLLNLQSA-LRRKD 139
Query: 133 XXXXXXXXQYDSFRRKAKKE 152
+Y SFR+K KKE
Sbjct: 140 KSMEVQIKEYFSFRKKIKKE 159
>AT4G35720.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16927972-16928949 FORWARD LENGTH=325
Length = 325
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 15 RSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSD-LVVLAELYNCM-EE 72
R +SLP R HPS +R++ +++ ++ S L++ TI D L L ELY C+ E+
Sbjct: 17 RCVSLPVRSHPSVRRIQEVVSKVRALGSSS------LDSRTIVRDSLSGLTELYRCLSED 70
Query: 73 LFQSP-QTQQALLHYQNGK-LVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXX 130
LF+S +TQQALL NG L+EE L S+ L+ C A+D + +K+ V LQSA
Sbjct: 71 LFKSSSETQQALL---NGDGLMEELLEVSLKYLEVCGGAKDAASRIKKIVVELQSALRRS 127
Query: 131 XXXXXXXXXXQYDSF---RRKAKKEIAKNLGAMKRMENKVSYFSLTGQEQNITFLARVLR 187
D++ R++ K+EI K + K + + G +Q ++ L RV++
Sbjct: 128 KKGGEFSLESDVDAYVASRKEIKQEIKKYMVMSKETDASLESVWCDGDDQEMSALVRVMQ 187
Query: 188 E 188
E
Sbjct: 188 E 188
>AT1G76210.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr1:28595202-28595882 REVERSE LENGTH=226
Length = 226
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 63 LAELYNCMEELFQ-SPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQ 121
L EL++C+ L P+T+++L K E+ S+ +LD C+ ++D+ +K +Q
Sbjct: 9 LRELHDCVNYLLHHCPKTRESLSQQGQEKWTEQVSEASLRMLDICNVSKDVMTLVKHSLQ 68
Query: 122 TLQSAXXXXXXXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRMENKVSYFSLTGQEQNITF 181
LQ Y+ ++ K KKE K L +K M+ ++ EQN+ F
Sbjct: 69 DLQLTLRGNESSDVNEKIAAYNRYKNKLKKETLKCLNCLKNMKGNEGRVAMPI-EQNLLF 127
Query: 182 LARVLREAXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNTNVVELN 241
+ VL+E +P L +K ++ L+
Sbjct: 128 VTEVLKEVRRVVVTMVESLFSLGCIPWL----------------------EKRSSKGSLS 165
Query: 242 ALCSLLARRKQGDAIAE--VQGALRVLETLNVSIDGLEGGLDCIFRRLVQNRVSFLNMLA 299
++ S+ + D E VQ A LE +++ LE L+ IFRRL+Q RVS LN+L
Sbjct: 166 SIFSIRSSYLLDDEWDETAVQSATTRLEAAEITVVELEIELESIFRRLIQTRVSLLNILT 225
>AT2G17080.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263
Length = 263
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 44/293 (15%)
Query: 14 VRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSST--ICLEADTIQSDLVVLAELYNCME 71
VRS S P+R HP + V+ L L++ SS+ IC D +Q EL+ ++
Sbjct: 7 VRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQ-------ELHESLD 59
Query: 72 ELFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXXX 131
+L P TQQAL N K VE+ L GS+ +LD C+ ++D +KE + +QS
Sbjct: 60 KLISRPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSI-LRRK 118
Query: 132 XXXXXXXXXQYDSFRRKAKK---EIAKNLGAMKRMENKVSYFSLTGQEQNITFLARVLRE 188
+Y + R+ KK ++ K+L + +N ++ G+ + IT
Sbjct: 119 RGDLSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDNNDDTLAVFGEAEAITL------- 171
Query: 189 AXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNTNVVELNALCSLLA 248
M G +T Q+N E +
Sbjct: 172 --------SLFDSLLSYMSGSKTCSKWSVVSKLMNKKKVTCEAQEN----EFTKV----- 214
Query: 249 RRKQGDAIAEVQGALRV--LETLNVSIDGLEGGLDCIFRRLVQNRVSFLNMLA 299
D+ + + L++ ++ L I LE GL+ + + L++ RVSFLN+L
Sbjct: 215 -----DSEFQSEKTLKMDDVQNLESCIQDLEDGLESLSKSLIKYRVSFLNILG 262
>AT2G17070.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7430863-7431654 REVERSE LENGTH=263
Length = 263
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 14 VRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSST--ICLEADTIQSDLVVLAELYNCME 71
VRS S P+ HP + V+ L L++ SS+ IC D +Q EL+ ++
Sbjct: 7 VRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQ-------ELHESLD 59
Query: 72 ELFQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXXX 131
+L + P TQQAL +N K VE+ L GS+ +LD C+ ++D +KE + +QS
Sbjct: 60 KLIRLPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQS-ILRRK 118
Query: 132 XXXXXXXXXQYDSFRRKAKK---EIAKNLGAMKRMENKVSYFSLTGQEQNIT 180
+Y + R+ KK ++ K+L A + +NK ++ G+ + +T
Sbjct: 119 RGDLSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDNKDKSLAVFGEAEAVT 170
>AT4G35210.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16751428-16752180 FORWARD LENGTH=250
Length = 250
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 14 VRSISLPTRVHPSSQRVEALLNHLKTHHSKPVSSTICLEADTIQSDLVVLAELYNCMEEL 73
VRS S P+R HP + V+ L L++ + SS+IC +Q +L++ +E++
Sbjct: 7 VRSSSYPSRQHPQAAHVDEQLTRLRSSGT-ASSSSICQRLSNLQ-------DLHDSLEKM 58
Query: 74 FQSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALKEHVQTLQSAXXXXXXX 133
+ T QAL Q +E+ L GS+ +LD CS ++D +KE ++ +QS
Sbjct: 59 IRLSVTNQALSQDQ----IEKLLDGSIKILDLCSISKDGLSQMKESLKEIQS-IVRRKRG 113
Query: 134 XXXXXXXQYDSFRRKAKKEIAKNLGAMKRMENKVSYFSLTGQEQNITF 181
+Y + R+ KK K L ++K +NK ++ G+ + +T
Sbjct: 114 DLSAEVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAVFGEAETVTI 161
>AT1G20520.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr1:7106922-7107617 REVERSE LENGTH=231
Length = 231
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 28/244 (11%)
Query: 59 DLVVLAELYNCMEELF-QSPQTQQALLHYQNGKLVEEALSGSVTLLDACSAARDISLALK 117
DL L EL +C L P+ +++L +E+ S+ +LD C+ ++D+ ++
Sbjct: 5 DLEGLRELQDCANYLLDHCPEARESLCQQGKENWIEQVSEASLIMLDVCNVSKDVMALVR 64
Query: 118 EHVQTLQSAXXXXXXXXXXXXXXQYDSFRRKAKKEIAKNLGAMKRMENKV-SYFSLTGQE 176
+Q LQ Y+ +R K KKE K L ++K +E + E
Sbjct: 65 HGLQDLQ-LTLRCNGSNLSEKVAAYNRYRNKLKKETLKCLNSLKSIEGGGRGMMEMQSIE 123
Query: 177 QNITFLARVLREAXXXXXXXXXXXXXXXXMPGLRTXXXXXXXXXXXXXXXXXXXQQKNTN 236
QN+ F+A VL+E +P L ++
Sbjct: 124 QNLLFVAEVLKEVRRAVVTMVESLFSLVCVPWLERKPSIGSF----------------SS 167
Query: 237 VVELNALCSLLARRKQGDAIAEV--QGALRVLETLNVSIDGLEGGLDCIFRRLVQNRVSF 294
+ + C DA EV + A LE ++++ LE L+CIFRRL+Q RVS
Sbjct: 168 IFTMQFCCF-------DDAWDEVAMRSASTRLEAAEITVEELEIELECIFRRLIQTRVSL 220
Query: 295 LNML 298
LN+L
Sbjct: 221 LNIL 224