Miyakogusa Predicted Gene

Lj4g3v2785690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2785690.1 Non Chatacterized Hit- tr|I1NH49|I1NH49_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,37.09,9e-18,
,CUFF.51628.1
         (213 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09830.1 | Symbols:  | Uncharacterised conserved protein UCP0...   180   6e-46
AT5G64780.1 | Symbols:  | Uncharacterised conserved protein UCP0...   144   6e-35

>AT4G09830.1 | Symbols:  | Uncharacterised conserved protein
           UCP009193 | chr4:6188866-6190591 FORWARD LENGTH=191
          Length = 191

 Score =  180 bits (457), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/210 (53%), Positives = 132/210 (62%), Gaps = 24/210 (11%)

Query: 1   MAKKRKSVATRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60
           M KKRKS AT LDEVDRT+Y++F T ANSLS LYT +MN QKLSFQAGERH LEK+YQWI
Sbjct: 1   MGKKRKSTATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWI 60

Query: 61  VRQQQEGSRVTTGDVVAHLQNELEYGAEE----PPMSPRQPVYQNSQTTMPTNFGASIPS 116
            RQQ+ GSRVT  D+V ++QNELE   +E    P   P QP    +   + T  G S P+
Sbjct: 61  WRQQEGGSRVTPMDIVNYIQNELECCIDEPPISPRAPPPQPTMHVTNPGLMTTSGTSFPT 120

Query: 117 NAFGTTVVGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNLMSSGNGA 176
                 VV    R+ Q + Q KNSVFSNALSSPIRRSLQ Y + QG        +SG   
Sbjct: 121 ---AVPVV----RSEQCENQAKNSVFSNALSSPIRRSLQNYQIPQGG------YTSGGTT 167

Query: 177 RNSEITYPNSQIRDTNSSNSSD-CMDMHAE 205
           R+SE+       R +NS  S D  MDMHAE
Sbjct: 168 RSSEVN------RGSNSPGSIDSSMDMHAE 191


>AT5G64780.1 | Symbols:  | Uncharacterised conserved protein
           UCP009193 | chr5:25900700-25901955 REVERSE LENGTH=175
          Length = 175

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 105/176 (59%), Gaps = 7/176 (3%)

Query: 1   MAKKRKSVATRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60
           M KKRKS ATRLDEVDRTMY  F   ANSLS LYTHAMN Q++SF AGER  +EK+YQWI
Sbjct: 1   MGKKRKSEATRLDEVDRTMYGAFRGAANSLSQLYTHAMNHQRVSFLAGERRGMEKLYQWI 60

Query: 61  VRQQQEGSRVTTGDVVAHLQNELEYGAEEPPMS-PRQPVYQNSQTTMPTNFGASIPSNAF 119
           VRQ+++G+RV+T D+  +LQN LEY  EE  +  P Q  YQ+     P N   S+     
Sbjct: 61  VRQEEQGTRVSTADITTYLQNALEYEPEETSIPLPMQEFYQHQ--FAPPNVNTSVAHVPS 118

Query: 120 GTTVVGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNLMSSGNG 175
                 Q         Q K  +  N LSSP+RR+LQ +++ +    ++N   +  G
Sbjct: 119 SHIAQQQHYDCN----QEKLLIPPNGLSSPVRRTLQDFNLCEAESGNNNYNPNSTG 170