Miyakogusa Predicted Gene

Lj4g3v2785650.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2785650.2 Non Chatacterized Hit- tr|I0YYP0|I0YYP0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.32,5e-16,seg,NULL; CLASS II CROSSOVER JUNCTION ENDONUCLEASE
MUS81,NULL; ERCC4,ERCC4 domain; coiled-coil,NULL,CUFF.51621.2
         (558 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22140.1 | Symbols: ATEME1B, EME1B | essential meiotic endonu...   428   e-120
AT2G21800.1 | Symbols: ATEME1A, EME1A | essential meiotic endonu...   377   e-104
AT2G21800.2 | Symbols: EME1A | essential meiotic endonuclease 1A...   373   e-103

>AT2G22140.1 | Symbols: ATEME1B, EME1B | essential meiotic
           endonuclease 1B | chr2:9414895-9418584 REVERSE
           LENGTH=551
          Length = 551

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/299 (66%), Positives = 252/299 (84%), Gaps = 4/299 (1%)

Query: 256 AIKSIVAKIDSKVVESGSIGGHLLTRFAEKGLKYQITSNPITGSILWSMEVPEHISQLST 315
           A+KSIVA+ID+KV+E GSIGG LL+RF+EKG+   +  NPI  SI+W+M +PE I+ L  
Sbjct: 250 ALKSIVAEIDTKVLE-GSIGGLLLSRFSEKGITIHVGPNPIERSIVWTMTIPEDIAPLFP 308

Query: 316 ERVEIPYVLLVYEADKFCNLTMDNSFFDQLSSIQSHYPAYTVCYLTNRLFSYINKREQEK 375
           +  +IPY+LLVY+A++FCNL  +  F + +S +Q  YP+YTVC LTN+L SY+ KRE+E+
Sbjct: 309 QGPKIPYLLLVYDAEEFCNLVANGKFLEIISRVQDRYPSYTVCCLTNKLMSYVKKREKEE 368

Query: 376 YKNPENNSSWRRPPVEEVLAKLTTNFTKVHSRQCVDEAELAEHVVGLTSSLASCQFRKKL 435
           YKNP N   WRRPP++EVLAKLTT++ KVHSR CVDEAE+AEH+VGLTSSLASCQFRKKL
Sbjct: 369 YKNPGN---WRRPPIDEVLAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLASCQFRKKL 425

Query: 436 TRLSVNANGSLIPKDSVDRNLIKKSLWLKALVAIPKVQPRFAIAIGKKYPTMKSLLSVYM 495
           T LSV+ANG+L+ KDSVD++LIKKS WLKALVAIPKVQPR+A+A+ KKYP+MKSLL VYM
Sbjct: 426 TMLSVSANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYALAVWKKYPSMKSLLKVYM 485

Query: 496 DPSKSEHEKEFLLKDLMTEGLLGGDRRLGQVCSKRVYRILMARSGSIRTDDVEDGADFF 554
           D +KS HEKEFLLKDL  EGL+GGD RLG++CSKR+YR+LM+  G+I+TDDVE+GA FF
Sbjct: 486 DRNKSVHEKEFLLKDLKVEGLVGGDIRLGEICSKRIYRVLMSHDGAIKTDDVENGAAFF 544


>AT2G21800.1 | Symbols: ATEME1A, EME1A | essential meiotic
           endonuclease 1A | chr2:9298196-9301745 FORWARD
           LENGTH=546
          Length = 546

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/299 (57%), Positives = 233/299 (77%), Gaps = 1/299 (0%)

Query: 256 AIKSIVAKIDSKVVESGSIGGHLLTRFAEKGLKYQITSNPITGSILWSMEVPEHISQLST 315
           A+K IVA ID+KV+E GS GG L++   EK + Y +T+NPI  SI+W+M +PE I+Q   
Sbjct: 241 ALKCIVAWIDNKVLE-GSFGGLLISGLKEKCITYHVTTNPIQRSIVWTMTLPEDIAQSLP 299

Query: 316 ERVEIPYVLLVYEADKFCNLTMDNSFFDQLSSIQSHYPAYTVCYLTNRLFSYINKREQEK 375
              +IPYVLL+YEA+ FCNL       + +  ++  YP+YT+CYLTN+L SY+NK+E+ +
Sbjct: 300 LGSKIPYVLLLYEAEDFCNLVAKKELLENVYRVRDEYPSYTMCYLTNKLLSYVNKKERVE 359

Query: 376 YKNPENNSSWRRPPVEEVLAKLTTNFTKVHSRQCVDEAELAEHVVGLTSSLASCQFRKKL 435
           YK+P N   WR+PP++E +AKL+T++  VHSR CVDEAE+A+HVV LTSSLA CQ RKKL
Sbjct: 360 YKDPVNGCGWRKPPIDEAIAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQVRKKL 419

Query: 436 TRLSVNANGSLIPKDSVDRNLIKKSLWLKALVAIPKVQPRFAIAIGKKYPTMKSLLSVYM 495
           TRLSV A+G+L+ K++ D++LI++S+WLK LVAIPKVQPR+AIA+ KKYP++KSLL VYM
Sbjct: 420 TRLSVYADGTLMSKNAADKHLIRESIWLKVLVAIPKVQPRYAIAVSKKYPSLKSLLKVYM 479

Query: 496 DPSKSEHEKEFLLKDLMTEGLLGGDRRLGQVCSKRVYRILMARSGSIRTDDVEDGADFF 554
           DP+ S HEKEFLLKDL  E L+G D  +G+ CSKR+YR+LM+  G+I+TDDVE+GA  F
Sbjct: 480 DPNISVHEKEFLLKDLKVENLVGRDTSVGEACSKRIYRVLMSLDGTIKTDDVENGAASF 538


>AT2G21800.2 | Symbols: EME1A | essential meiotic endonuclease 1A |
           chr2:9298196-9301745 FORWARD LENGTH=549
          Length = 549

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 172/301 (57%), Positives = 232/301 (77%), Gaps = 2/301 (0%)

Query: 256 AIKSIVAKIDSKVVES--GSIGGHLLTRFAEKGLKYQITSNPITGSILWSMEVPEHISQL 313
           A+K IVA ID+KV+E   G I G L++   EK + Y +T+NPI  SI+W+M +PE I+Q 
Sbjct: 241 ALKCIVAWIDNKVLEGSFGVITGLLISGLKEKCITYHVTTNPIQRSIVWTMTLPEDIAQS 300

Query: 314 STERVEIPYVLLVYEADKFCNLTMDNSFFDQLSSIQSHYPAYTVCYLTNRLFSYINKREQ 373
                +IPYVLL+YEA+ FCNL       + +  ++  YP+YT+CYLTN+L SY+NK+E+
Sbjct: 301 LPLGSKIPYVLLLYEAEDFCNLVAKKELLENVYRVRDEYPSYTMCYLTNKLLSYVNKKER 360

Query: 374 EKYKNPENNSSWRRPPVEEVLAKLTTNFTKVHSRQCVDEAELAEHVVGLTSSLASCQFRK 433
            +YK+P N   WR+PP++E +AKL+T++  VHSR CVDEAE+A+HVV LTSSLA CQ RK
Sbjct: 361 VEYKDPVNGCGWRKPPIDEAIAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQVRK 420

Query: 434 KLTRLSVNANGSLIPKDSVDRNLIKKSLWLKALVAIPKVQPRFAIAIGKKYPTMKSLLSV 493
           KLTRLSV A+G+L+ K++ D++LI++S+WLK LVAIPKVQPR+AIA+ KKYP++KSLL V
Sbjct: 421 KLTRLSVYADGTLMSKNAADKHLIRESIWLKVLVAIPKVQPRYAIAVSKKYPSLKSLLKV 480

Query: 494 YMDPSKSEHEKEFLLKDLMTEGLLGGDRRLGQVCSKRVYRILMARSGSIRTDDVEDGADF 553
           YMDP+ S HEKEFLLKDL  E L+G D  +G+ CSKR+YR+LM+  G+I+TDDVE+GA  
Sbjct: 481 YMDPNISVHEKEFLLKDLKVENLVGRDTSVGEACSKRIYRVLMSLDGTIKTDDVENGAAS 540

Query: 554 F 554
           F
Sbjct: 541 F 541