Miyakogusa Predicted Gene

Lj4g3v2754450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2754450.1 tr|F4XZ00|F4XZ00_9CYAN PAP fibrillin OS=Moorea
producens 3L GN=LYNGBM3L_52540 PE=4 SV=1,33.67,8e-19,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; PAP_fibrillin,Plastid
lipid-associated pr,CUFF.51600.1
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09820.2 | Symbols:  | Plastid-lipid associated protein PAP /...   246   8e-66
AT5G09820.1 | Symbols:  | Plastid-lipid associated protein PAP /...   216   9e-57
AT4G22240.1 | Symbols:  | Plastid-lipid associated protein PAP /...    67   1e-11
AT3G26070.1 | Symbols:  | Plastid-lipid associated protein PAP /...    67   2e-11
AT4G04020.1 | Symbols: FIB | fibrillin | chr4:1932161-1933546 FO...    62   4e-10
AT3G23400.1 | Symbols: FIB4 | Plastid-lipid associated protein P...    62   5e-10

>AT5G09820.2 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr5:3056090-3057380 REVERSE
           LENGTH=273
          Length = 273

 Score =  246 bits (629), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 132/256 (51%), Positives = 166/256 (64%), Gaps = 19/256 (7%)

Query: 12  RTMNIMKLQNFVPAGNCSRINTTSRFGERASWFRPITIMKVAEQSSGLVEDE-------- 63
           RT N+  L +F  +        T  F + +   RP+ I KV EQSS    +E        
Sbjct: 21  RTGNVKVLVSFTSSNG-----KTLSFSDNSFRLRPMFIGKVTEQSSCSSPNEQQQDEEQE 75

Query: 64  ------TLAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKV 117
                 T++  K ELY A++GINRGIFG+ S +K EIE LVK LE +NPTP+PT EL+K+
Sbjct: 76  QEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKI 135

Query: 118 AGCWRLIYSTISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXX 177
            GCW+LIYSTI++LGSKRTKLGLRDF+SLGD  Q ID  Q K V+V+KF           
Sbjct: 136 GGCWKLIYSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGE 195

Query: 178 XXXXXXFKIASTTRVDINYEKSTIIPDQLMNLFRKNYDLLLSIFNPEGWLEITYVDDSMR 237
                 FKI+S + V+I YE STI PDQLMN+FRKN DLLL IFNPEG  EI+Y+D+ ++
Sbjct: 196 FRIVASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDEDLQ 255

Query: 238 IGRDDKGNIFVLERSE 253
           +GRD KGN+FVLER E
Sbjct: 256 VGRDGKGNVFVLERIE 271


>AT5G09820.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr5:3056219-3057380 REVERSE
           LENGTH=259
          Length = 259

 Score =  216 bits (551), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 119/234 (50%), Positives = 147/234 (62%), Gaps = 19/234 (8%)

Query: 12  RTMNIMKLQNFVPAGNCSRINTTSRFGERASWFRPITIMKVAEQSSGLVEDE-------- 63
           RT N+  L +F  +        T  F + +   RP+ I KV EQSS    +E        
Sbjct: 21  RTGNVKVLVSFTSSNG-----KTLSFSDNSFRLRPMFIGKVTEQSSCSSPNEQQQDEEQE 75

Query: 64  ------TLAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKV 117
                 T++  K ELY A++GINRGIFG+ S +K EIE LVK LE +NPTP+PT EL+K+
Sbjct: 76  QEQEEITVSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKI 135

Query: 118 AGCWRLIYSTISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXX 177
            GCW+LIYSTI++LGSKRTKLGLRDF+SLGD  Q ID  Q K V+V+KF           
Sbjct: 136 GGCWKLIYSTITVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGE 195

Query: 178 XXXXXXFKIASTTRVDINYEKSTIIPDQLMNLFRKNYDLLLSIFNPEGWLEITY 231
                 FKI+S + V+I YE STI PDQLMN+FRKN DLLL IFNPEG  EI+Y
Sbjct: 196 FRIVASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISY 249


>AT4G22240.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr4:11766090-11767227
           REVERSE LENGTH=310
          Length = 310

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 44/229 (19%)

Query: 60  VED-ETLAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVA 118
           +ED E   + KR L  ++ G +RG+    S  + EI +L+ QLES+NPTP PT  L  + 
Sbjct: 77  IEDVEETERLKRSLVDSLYGTDRGL-SASSETRAEIGDLITQLESKNPTPAPTEALFLLN 135

Query: 119 GCWRLIYSTISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXXX 178
           G W L Y++   L    ++ G+   I + +  QTID       N ++F            
Sbjct: 136 GKWILAYTSFVNLFPLLSR-GIVPLIKVDEISQTIDSDNFTVQNSVRF---AGPLGTNSI 191

Query: 179 XXXXXFKIASTTRVDINYEKSTIIPDQLMN---------LFRKNYDL------------- 216
                F+I S  RV I +E+  I   QL +         +  +  DL             
Sbjct: 192 STNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDT 251

Query: 217 ----------------LLSIFNPEGWLEITYVDDSMRIGRDDKGNIFVL 249
                            L   N + WL  TY+D  +RI R D G++FVL
Sbjct: 252 ASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVL 300


>AT3G26070.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr3:9526904-9528199 FORWARD
           LENGTH=242
          Length = 242

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 26/189 (13%)

Query: 63  ETLAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVAGCWR 122
           E   Q K+EL  A+E + RG    P  Q + I+ L +++E+ NPT +P L+ + V G W 
Sbjct: 69  EKQKQLKQELLEAIEPLERGATASPDDQ-LRIDQLARKVEAVNPTKEP-LKSDLVNGKWE 126

Query: 123 LIYST-ISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXXXXXX 181
           LIY+T  SIL +K+ +           F ++I   QS  V+ +K                
Sbjct: 127 LIYTTSASILQAKKPR-----------FLRSITNYQSINVDTLKV------------QNM 163

Query: 182 XXFKIASTTRVDINYEKSTIIPDQLMNLFRKNYDLLLSIFNPEGWLEITYVDDSMRIGRD 241
             +   ++   DI    S  +  +L       +  + +  +  G LEITYVD+ +R+ R 
Sbjct: 164 ETWPFYNSVTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRG 223

Query: 242 DKGNIFVLE 250
           DKGN+F+L+
Sbjct: 224 DKGNLFILK 232


>AT4G04020.1 | Symbols: FIB | fibrillin | chr4:1932161-1933546
           FORWARD LENGTH=318
          Length = 318

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 49/222 (22%)

Query: 69  KRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVAGCWRLIYST- 127
           KR L  ++ G +RG+  + S  + EI  L+ QLES+NPTP P   L  + G W L Y++ 
Sbjct: 95  KRSLADSLYGTDRGL-SVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSF 153

Query: 128 --ISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXXXXXXXXFK 185
             +  L S+R    +   + + +  QTID       N ++F                 F+
Sbjct: 154 VGLFPLLSRR----IEPLVKVDEISQTIDSDSFTVQNSVRF---AGPFSTTSFSTNAKFE 206

Query: 186 IASTTRVDINYEKSTI----------IPDQLMNLFRK-----NYDLLLSIF--------- 221
           I S  RV I +E+  I          IP+ +  L +K        LL S+          
Sbjct: 207 IRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVART 266

Query: 222 --------------NPEGWLEITYVDDSMRIGRDDKGNIFVL 249
                         N + WL  TY+D  +RI R D G+++VL
Sbjct: 267 ISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVL 308


>AT3G23400.1 | Symbols: FIB4 | Plastid-lipid associated protein PAP
           / fibrillin family protein | chr3:8376636-8378225
           REVERSE LENGTH=284
          Length = 284

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 31/194 (15%)

Query: 78  GINRGIFGMPSAQKIE-IENLVKQLESQNPTPDPTLELEKVAGCWRLIYSTI---SILGS 133
           G+NRG+    S   +E  E   K+LE+     D T +L+K+ G WRL+YS+      LG 
Sbjct: 97  GLNRGLVA--SVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGG 154

Query: 134 KRTKLGLRDFI--SLGDFFQTIDEVQSKAVNVIKFXXXXX---XXXXXXXXXXXXFKIAS 188
            R  L     I  +LG  FQ ID       N+ +                     F++  
Sbjct: 155 SRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLG 214

Query: 189 TTRVDINYEKSTI--------IPD----QLMNLFRKNYDLLLSIFNP-EGWLEITYVDDS 235
           T ++ I +EK+T+        IP     +L + FR +        NP  G  E+TYVDD+
Sbjct: 215 TCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSS-------NPGTGDFEVTYVDDT 267

Query: 236 MRIGRDDKGNIFVL 249
           MRI R D+G + V 
Sbjct: 268 MRITRGDRGELRVF 281