Miyakogusa Predicted Gene

Lj4g3v2742990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2742990.1 Non Chatacterized Hit- tr|J3LLE2|J3LLE2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,35.46,4e-18,seg,NULL; zf-CCCH,Zinc finger, CCCH-type; no
description,NULL; zinc finger,Zinc finger, CCCH-type;
Z,NODE_12332_length_2268_cov_48.412697.path2.1
         (663 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...   155   9e-38
AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type ...    73   7e-13
AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases | ...    71   3e-12
AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases | ...    71   3e-12

>AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
           protein | chr3:6413617-6415829 REVERSE LENGTH=676
          Length = 676

 Score =  155 bits (392), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 248/571 (43%), Gaps = 139/571 (24%)

Query: 126 LNRSADTPCRFFAFGN--CRNGNHCRFSHDRQXXXXXXXXXXXXXXXXNQGGDQVSNRPK 183
            +RS++ PC+FFA G   CRNG +CRFSH                         V++R +
Sbjct: 212 FHRSSNIPCKFFAAGTGFCRNGKYCRFSH------------------------HVADRKQ 247

Query: 184 LSDSASSNGRLRDDRWRSDGSIADVSKVWDGPKSNDLSAVSNSR----KLVEDNQDGIMG 239
             D+ ++N   +D+   + G            K ND+  + N R    ++   ++ G+  
Sbjct: 248 PQDN-NNNFYRQDNNNHTSGH----------NKWNDVERLDNGRVGGIEVSRASKKGVSE 296

Query: 240 APGHGFSAW----PMSDGWDH---SLDKNMVHDKT-----------SFSSDKKEPNLWAA 281
           + G+G S+W     MS  W++   +L K +  D +               D++   +++ 
Sbjct: 297 SKGNGSSSWIDDMEMSPDWNYGVQALKKPVKEDHSVGIIGQSSQSRVLKDDQRSSGMFSH 356

Query: 282 GNATANIHTSQPVGTGIWPGDEQMSPDWNVGTSSHFKKNHEQNNLQVAPGHGYNQNAQNV 341
           G  T      +PV                   +SH       N++ VAP   +NQN    
Sbjct: 357 GGRTM---AEKPVA------------------ASH---QSYSNSVNVAPVETFNQNH--- 389

Query: 342 NALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQE---LFTEKKYIGEPNIMDASLLQVG 398
           NAL   SS   G SQ   +       +   + N E   ++ +  +    + ++  +L   
Sbjct: 390 NALPYQSSLTAGGSQQVLAAAATNFSVGSNLSNLESGKVYQDNHH----STVEKPVL--- 442

Query: 399 SRNPSTQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSN----LNSHDAKDTPSGKPV 454
                 QN VS+EQ+ Q+T ++ASLAQ L  G  +PQL       L+S   +   +    
Sbjct: 443 -----VQNTVSREQIDQITNISASLAQFLANGQPIPQLEQALQLPLHSESVQPNQATTQS 497

Query: 455 SIAFSKPDPSIGFQKHNNPSGFSPMISPSKIIPKESVEMPSLLSNSEQFDDSCKTAFSEE 514
           ++  S P+   G        G  P ++ SKI            SN E+  +         
Sbjct: 498 NVVSSNPNQLWGLGMSTGAEGV-PAVTASKI------------SNVEEIQE--------- 535

Query: 515 QLVKSKHLIQLQKDENIGDNKESNEMVAEEKRSSRGENKITKES--GPLESMDQSGGPDE 572
                   + L   EN GD K+++E   EE+    GE+    E+     E  D  G  +E
Sbjct: 536 --------VSLDPKEN-GD-KKTDEASKEEEGKKTGEDTNDAENVVDEDEDGDDDGSDEE 585

Query: 573 IKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVP 632
            KK KD KGMRAFK +LVE +KELLKP WKEG++ KD YK I            Q  +VP
Sbjct: 586 NKKEKDPKGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGTMQSGNVP 645

Query: 633 QTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 663
           QTQEKID YLS SKPKL KL+QAYV K++K 
Sbjct: 646 QTQEKIDHYLSASKPKLTKLVQAYVGKIKKT 676


>AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type
           family protein | chr2:14312145-14314566 REVERSE
           LENGTH=587
          Length = 587

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)

Query: 572 EIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAH- 630
           E++    +K MR F+ ++VE IKE+LKP W+EG++TKD +  I             + H 
Sbjct: 495 EVRSDAGMKVMRLFRTAVVETIKEMLKPLWREGRLTKDVHNMIVKKAAEKVVGAAVQFHQ 554

Query: 631 VPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQK 662
           VP   E +D+YL +S  ++ KL++ YVEK  K
Sbjct: 555 VPTDTESVDQYLGLSGTRIVKLVEGYVEKYGK 586


>AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query: 580 KGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKID 639
           + M+ FK  L +F+K+LLKP+W++G ++K+ +K I            +   +P+++ KID
Sbjct: 182 RSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKID 241

Query: 640 RYLSVSKPKLNKLIQAYVEKVQKA 663
           +Y+  S+ KL KL+  YV+K  KA
Sbjct: 242 KYIDSSQQKLTKLVMGYVDKYVKA 265


>AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases |
           chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query: 580 KGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKID 639
           + M+ FK  L +F+K+LLKP+W++G ++K+ +K I            +   +P+++ KID
Sbjct: 182 RSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKID 241

Query: 640 RYLSVSKPKLNKLIQAYVEKVQKA 663
           +Y+  S+ KL KL+  YV+K  KA
Sbjct: 242 KYIDSSQQKLTKLVMGYVDKYVKA 265