Miyakogusa Predicted Gene

Lj4g3v2730400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2730400.1 Non Chatacterized Hit- tr|I3T4D1|I3T4D1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.08,2e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.51613.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13000.2 | Symbols:  | Protein of unknown function (DUF707) |...    49   9e-07
AT1G13000.1 | Symbols:  | Protein of unknown function (DUF707) |...    49   9e-07
AT3G27470.2 | Symbols:  | Protein of unknown function (DUF707) |...    48   2e-06
AT3G27470.1 | Symbols:  | Protein of unknown function (DUF707) |...    48   2e-06

>AT1G13000.2 | Symbols:  | Protein of unknown function (DUF707) |
          chr1:4436402-4438693 REVERSE LENGTH=401
          Length = 401

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 6  RSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYIEDK 62
          R S  +KP+D MRL                SFP L+ TKLN PS + PSVD++Y+ED+
Sbjct: 10 RCSNGKKPNDGMRLIIATFVGIVVGFFLGISFPTLSLTKLNFPSGILPSVDITYVEDE 67


>AT1G13000.1 | Symbols:  | Protein of unknown function (DUF707) |
          chr1:4436402-4438693 REVERSE LENGTH=401
          Length = 401

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 6  RSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYIEDK 62
          R S  +KP+D MRL                SFP L+ TKLN PS + PSVD++Y+ED+
Sbjct: 10 RCSNGKKPNDGMRLIIATFVGIVVGFFLGISFPTLSLTKLNFPSGILPSVDITYVEDE 67


>AT3G27470.2 | Symbols:  | Protein of unknown function (DUF707) |
          chr3:10163947-10166550 FORWARD LENGTH=398
          Length = 398

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 11 RKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYIEDK 62
          R+PS  MRL                +FP LT TK+NLPS+L PS+D++YIEDK
Sbjct: 2  RRPSQMMRLLLTSFFGVIVGFLMGITFPTLTLTKMNLPSTLFPSIDLAYIEDK 54


>AT3G27470.1 | Symbols:  | Protein of unknown function (DUF707) |
          chr3:10163947-10166550 FORWARD LENGTH=398
          Length = 398

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 11 RKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYIEDK 62
          R+PS  MRL                +FP LT TK+NLPS+L PS+D++YIEDK
Sbjct: 2  RRPSQMMRLLLTSFFGVIVGFLMGITFPTLTLTKMNLPSTLFPSIDLAYIEDK 54